mRNA_F-serratus_M_contig994.21235.1 (mRNA) Fucus serratus male
Overview
Homology
BLAST of mRNA_F-serratus_M_contig994.21235.1 vs. uniprot
Match: D8LEH8_ECTSI (cGMP-dependent protein kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEH8_ECTSI) HSP 1 Score: 98.6 bits (244), Expect = 3.250e-21 Identity = 58/102 (56.86%), Postives = 70/102 (68.63%), Query Frame = 2 Query: 23 GSGAFSEALRVSRRETATVFLVREGSIAVTQGGLTRT-VRAGEVCVCGVPRRGIPPVTRVACSPQEREVTVVSVPLESLRRGSVFT-PASLDSFLRLLSVGY 322 GS E RVSRR+ TV L REGS AVT TR V AGEV VCGVPRRGIP +T+V + + VV VPLES R+G +F+ PA+LD+FLR+LSVG+ Sbjct: 715 GSSGMGETRRVSRRDAPTVLLFREGSAAVTLSDGTRMKVGAGEVLVCGVPRRGIPRITKVT---SDTKAKVVEVPLESFRKGGLFSSPAALDAFLRVLSVGF 813
BLAST of mRNA_F-serratus_M_contig994.21235.1 vs. uniprot
Match: A0A6H5JEK9_9PHAE (cGMP-dependent protein kinase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEK9_9PHAE) HSP 1 Score: 98.2 bits (243), Expect = 4.480e-21 Identity = 58/102 (56.86%), Postives = 69/102 (67.65%), Query Frame = 2 Query: 23 GSGAFSEALRVSRRETATVFLVREGSIAVTQGGLTRT-VRAGEVCVCGVPRRGIPPVTRVACSPQEREVTVVSVPLESLRRGSVFT-PASLDSFLRLLSVGY 322 GS E RVSRR+ TV L REGS AVT TR V AGEV VCGVPRRGIP +T+V + + VV VPLES R+G +F+ P SLD+FLR+LSVG+ Sbjct: 820 GSSGMGETRRVSRRDAPTVLLFREGSAAVTLSDGTRMKVGAGEVLVCGVPRRGIPRITKVT---SDSKAKVVEVPLESFRKGGLFSSPTSLDAFLRVLSVGF 918 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig994.21235.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig994.21235.1 >prot_F-serratus_M_contig994.21235.1 ID=prot_F-serratus_M_contig994.21235.1|Name=mRNA_F-serratus_M_contig994.21235.1|organism=Fucus serratus male|type=polypeptide|length=143bp GRSGVSRREWGVFGSLAGQPEGDSNGVSRARGFDCRDTGGADAHRPRRRSback to top mRNA from alignment at F-serratus_M_contig994:276225..276999+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig994.21235.1 ID=mRNA_F-serratus_M_contig994.21235.1|Name=mRNA_F-serratus_M_contig994.21235.1|organism=Fucus serratus male|type=mRNA|length=775bp|location=Sequence derived from alignment at F-serratus_M_contig994:276225..276999+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig994:276225..276999+ >mRNA_F-serratus_M_contig994.21235.1 ID=mRNA_F-serratus_M_contig994.21235.1|Name=mRNA_F-serratus_M_contig994.21235.1|organism=Fucus serratus male|type=CDS|length=858bp|location=Sequence derived from alignment at F-serratus_M_contig994:276225..276999+ (Fucus serratus male)back to top |