mRNA_F-serratus_M_contig994.21233.1 (mRNA) Fucus serratus male
Overview
Homology
BLAST of mRNA_F-serratus_M_contig994.21233.1 vs. uniprot
Match: D8LEH7_ECTSI (Proteasome endopeptidase complex n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEH7_ECTSI) HSP 1 Score: 330 bits (845), Expect = 3.170e-105 Identity = 167/221 (75.57%), Postives = 185/221 (83.71%), Query Frame = 2 Query: 176 ATTVVAARFQDGVVIGADSRTSQGNFVANRLTDKITPIYPGIFLARSGSSADSQFVAGVVEAKLEAYRTEFGRAPTVRVAATISRNLCYNNKDQLSAGVICAGWDPREGGSVFSIPQGGSLLELPFAISGSGSVYALGYCDDHLRPGLGRDECVLHVQKALEMALSRDGASGGIIRMCVATRAGVERWTVAPGLLQQ-----------RREAGRTPGDGGG 805 ATT+VAARF GVVIGADSRTSQG+FVAN TDKITP+ PG+FLARSGSSAD+QFVAGV+EAKLEAYRTEFGR PTVR AAT +RNLCY NKDQLSAG+ICAGWD REGGSVFS+PQGGSLLE PFA+SGSG+VYALGYCDD+LRPGLGRDECV HV+ ALEMA+ RDGASGG+IR+CV + GVERWTV PG+ RREA R DGGG Sbjct: 22 ATTLVAARFDGGVVIGADSRTSQGSFVANSGTDKITPVSPGVFLARSGSSADTQFVAGVIEAKLEAYRTEFGRYPTVRAAATATRNLCYANKDQLSAGIICAGWDSREGGSVFSVPQGGSLLEQPFAVSGSGAVYALGYCDDNLRPGLGRDECVSHVRTALEMAVRRDGASGGVIRLCVVSADGVERWTVVPGMTAAAAAGVGEXXXGRREA-RRASDGGG 241
BLAST of mRNA_F-serratus_M_contig994.21233.1 vs. uniprot
Match: A0A1Y1WB45_9FUNG (Proteasome subunit beta n=1 Tax=Linderina pennispora TaxID=61395 RepID=A0A1Y1WB45_9FUNG) HSP 1 Score: 217 bits (553), Expect = 1.280e-62 Identity = 103/199 (51.76%), Postives = 145/199 (72.86%), Query Frame = 2 Query: 173 LATTVVAARFQDGVVIGADSRTSQGNFVANRLTDKITPIYPGIFLARSGSSADSQFVAGVVEAKLEAYRTEFGRAPTVRVAATISRNLCYNNKDQLSAGVICAGWDPREGGSVFSIPQGGSLLELPFAISGSGSVYALGYCDDHLRPGLGRDECVLHVQKALEMALSRDGASGGIIRMCVATRAGVERWTVAPGLLQQR 769 L TT++A +F GVV+GADSRT+ G ++ANR+TDK+T I+ I+ RSGS+AD+Q VA +V+ ++ Y + G APTV+VAA++ + +CY NK+ LSAG+I AGWD R+G SV++IP GGSL PFAI GSGS Y GYCD RP L RDEC+ V+ ++ +A++RDG+SGG++R+ V T+ GVER V L ++ Sbjct: 11 LGTTIMAVQFDGGVVVGADSRTTTGAYIANRVTDKLTKIHDRIYCCRSGSAADTQAVADIVQYHMQMYTAQHGEAPTVKVAASLFQEICYQNKNNLSAGIIVAGWDERDGASVYNIPLGGSLHREPFAIGGSGSTYIYGYCDKVFRPDLSRDECIEFVKNSVSLAMTRDGSSGGVVRLAVITKDGVERQFVPGDQLPEQ 209
BLAST of mRNA_F-serratus_M_contig994.21233.1 vs. uniprot
Match: A0A8H7UIW0_MORIS (Proteasome subunit beta n=1 Tax=Mortierella isabellina TaxID=91625 RepID=A0A8H7UIW0_MORIS) HSP 1 Score: 214 bits (544), Expect = 2.480e-61 Identity = 99/188 (52.66%), Postives = 141/188 (75.00%), Query Frame = 2 Query: 173 LATTVVAARFQDGVVIGADSRTSQGNFVANRLTDKITPIYPGIFLARSGSSADSQFVAGVVEAKLEAYRTEFGRAPTVRVAATISRNLCYNNKDQLSAGVICAGWDPREGGSVFSIPQGGSLLELPFAISGSGSVYALGYCDDHLRPGLGRDECVLHVQKALEMALSRDGASGGIIRMCVATRAGVER 736 L T+++A F+DGV++GADSRT+ G+++ANR+TDK+T ++ I+ RSGS+AD+Q VA +V+ L+ Y + P+V AAT+ + +CY NKDQLSAG+I AGWD ++GG+V++IP GGSL + PFAI GSGS Y GYCD + G+ R+ECV V+ +L +A++RDG+SGG+IRM V T GVER Sbjct: 10 LGTSIMAVAFKDGVIVGADSRTTTGSYIANRVTDKLTKVHDLIYCCRSGSAADTQAVADIVQYYLQMYSVQQDEPPSVHTAATLFQEMCYQNKDQLSAGIIVAGWDKKKGGTVYNIPLGGSLHQQPFAIGGSGSTYIYGYCDSQYKDGMSREECVDFVKNSLALAMARDGSSGGVIRMAVITEKGVER 197
BLAST of mRNA_F-serratus_M_contig994.21233.1 vs. uniprot
Match: A0A2H3JGI1_WOLCO (Proteasome subunit beta n=1 Tax=Wolfiporia cocos (strain MD-104) TaxID=742152 RepID=A0A2H3JGI1_WOLCO) HSP 1 Score: 214 bits (545), Expect = 4.630e-61 Identity = 102/188 (54.26%), Postives = 137/188 (72.87%), Query Frame = 2 Query: 173 LATTVVAARFQDGVVIGADSRTSQGNFVANRLTDKITPIYPGIFLARSGSSADSQFVAGVVEAKLEAYRTEFGRAPTVRVAATISRNLCYNNKDQLSAGVICAGWDPREGGSVFSIPQGGSLLELPFAISGSGSVYALGYCDDHLRPGLGRDECVLHVQKALEMALSRDGASGGIIRMCVATRAGVER 736 L T+++A +F+DGVVIGADSRT+ G+++ANR+TDK+T ++ I+ RSGS+AD+Q +A V L+ Y +G AP+V AAT+ LCY+NKD LSAG+ICAGWD EG SV++IP GG + P+AI GSGS Y GYCD R G G++E + V+ L +A+SRDG+SGG+IRMCV T GVER Sbjct: 18 LGTSIMAVQFKDGVVIGADSRTTTGSYIANRVTDKLTHVHDRIYCCRSGSAADTQAIADSVHYSLQIYTQIYGHAPSVHTAATVFNRLCYDNKDMLSAGIICAGWDKDEGPSVYNIPLGGGIFRQPWAIGGSGSTYVYGYCDATYREGWGKEETIEFVKNTLALAMSRDGSSGGVIRMCVITGDGVER 205
BLAST of mRNA_F-serratus_M_contig994.21233.1 vs. uniprot
Match: A0A1Y1Y0Z6_9FUNG (Proteasome subunit beta n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1Y0Z6_9FUNG) HSP 1 Score: 213 bits (542), Expect = 4.980e-61 Identity = 100/188 (53.19%), Postives = 136/188 (72.34%), Query Frame = 2 Query: 173 LATTVVAARFQDGVVIGADSRTSQGNFVANRLTDKITPIYPGIFLARSGSSADSQFVAGVVEAKLEAYRTEFGRAPTVRVAATISRNLCYNNKDQLSAGVICAGWDPREGGSVFSIPQGGSLLELPFAISGSGSVYALGYCDDHLRPGLGRDECVLHVQKALEMALSRDGASGGIIRMCVATRAGVER 736 L TT++A F GV+IGADSRT+ G+++ANR+TDK+TP++ I+ RSGS+AD+Q VA +V L+ Y + G APT R AA++ + LCY NKD L AG+I GWD ++GG V++IP GGSL PFAI GSGS Y GYCD + G+ +DEC+ V+ A+ +A+SRDG+SGG+IRM + T GVER Sbjct: 11 LGTTIMAVEFDKGVIIGADSRTTTGSYIANRVTDKLTPVHDRIWCCRSGSAADTQAVADIVHYYLQMYSVQHGEAPTTRAAASLFQELCYTNKDALMAGIIVGGWDKKDGGCVYNIPLGGSLHREPFAIGGSGSTYIYGYCDSVYKRGMTKDECLEFVRNAVSLAMSRDGSSGGVIRMAIITEEGVER 198
BLAST of mRNA_F-serratus_M_contig994.21233.1 vs. uniprot
Match: A0A0K6FW39_9AGAM (Proteasome subunit beta n=16 Tax=Rhizoctonia solani TaxID=456999 RepID=A0A0K6FW39_9AGAM) HSP 1 Score: 214 bits (544), Expect = 5.690e-61 Identity = 104/188 (55.32%), Postives = 136/188 (72.34%), Query Frame = 2 Query: 173 LATTVVAARFQDGVVIGADSRTSQGNFVANRLTDKITPIYPGIFLARSGSSADSQFVAGVVEAKLEAYRTEFGRAPTVRVAATISRNLCYNNKDQLSAGVICAGWDPREGGSVFSIPQGGSLLELPFAISGSGSVYALGYCDDHLRPGLGRDECVLHVQKALEMALSRDGASGGIIRMCVATRAGVER 736 L T+++A +F+ GVVIGADSRT+ G+++ANR+TDK+T ++ I+ RSGS+AD+Q VA +V L+ Y ++ PTV AATI + +CY+NKD LSAG+I AGWD + GGSV++IP GG L P+AI GSGS Y GYCD R G GRDE V V+ L +A+SRDG+SGG IRMCV T GVER Sbjct: 16 LGTSIMAVQFEGGVVIGADSRTTMGSYIANRVTDKLTHVHDRIYCCRSGSAADTQAVADIVHYYLQMYEQQYSERPTVHTAATIFQRICYDNKDALSAGIIVAGWDKQVGGSVYNIPVGGGLFRQPWAIGGSGSTYVYGYCDATYREGWGRDETVNFVKNTLALAMSRDGSSGGTIRMCVITEDGVER 203
BLAST of mRNA_F-serratus_M_contig994.21233.1 vs. uniprot
Match: A0A8H8LV04_9AGAM (Proteasome subunit beta n=2 Tax=Ceratobasidium sp. AG-Ba TaxID=170446 RepID=A0A8H8LV04_9AGAM) HSP 1 Score: 214 bits (544), Expect = 5.690e-61 Identity = 104/188 (55.32%), Postives = 135/188 (71.81%), Query Frame = 2 Query: 173 LATTVVAARFQDGVVIGADSRTSQGNFVANRLTDKITPIYPGIFLARSGSSADSQFVAGVVEAKLEAYRTEFGRAPTVRVAATISRNLCYNNKDQLSAGVICAGWDPREGGSVFSIPQGGSLLELPFAISGSGSVYALGYCDDHLRPGLGRDECVLHVQKALEMALSRDGASGGIIRMCVATRAGVER 736 L T+++A +F+DGVVIGADSRT+ G+++ANR+TDK+T ++ ++ RSGS+AD+Q VA +V L+ Y ++G PTV AAT+ + LCY NKD LSAG+I AGWD G SV++IP GG L P+AI GSGS Y GYCD R G GRDE V V+ L +A+SRDG+SGG IRMCV T GVER Sbjct: 16 LGTSIMAVQFKDGVVIGADSRTTMGSYIANRVTDKLTFVHDRVYCCRSGSAADTQAVADIVHYYLQMYEQQYGDPPTVHAAATLFQRLCYENKDNLSAGIIVAGWDKEAGPSVYNIPVGGGLFRQPWAIGGSGSTYVYGYCDATYREGWGRDETVNFVKNTLALAMSRDGSSGGTIRMCVITEEGVER 203
BLAST of mRNA_F-serratus_M_contig994.21233.1 vs. uniprot
Match: A0A4P9XSG4_9FUNG (Proteasome subunit beta n=1 Tax=Thamnocephalis sphaerospora TaxID=78915 RepID=A0A4P9XSG4_9FUNG) HSP 1 Score: 210 bits (535), Expect = 5.270e-60 Identity = 102/188 (54.26%), Postives = 130/188 (69.15%), Query Frame = 2 Query: 173 LATTVVAARFQDGVVIGADSRTSQGNFVANRLTDKITPIYPGIFLARSGSSADSQFVAGVVEAKLEAYRTEFGRAPTVRVAATISRNLCYNNKDQLSAGVICAGWDPREGGSVFSIPQGGSLLELPFAISGSGSVYALGYCDDHLRPGLGRDECVLHVQKALEMALSRDGASGGIIRMCVATRAGVER 736 L TT++A F GVVI ADSRT+ G ++ANR+TDK+T ++ I+ RSGS+AD+Q VA +V ++ Y E AP RVAA I + LCY NKD LSAG+I AGWD GG V+SIP GGSL PFAI GSGS Y GYCD R G+ RDECV + A+ +A++RDG+SGG+IR+ + T GVER Sbjct: 12 LGTTIMAVEFDGGVVIAADSRTTTGAYIANRVTDKLTKVHDRIYCCRSGSAADTQAVADIVHYYMQMYSVEHSEAPRTRVAAAIFQELCYKNKDALSAGIIVAGWDKHTGGQVYSIPLGGSLHRQPFAIGGSGSTYIYGYCDSAFRVGMSRDECVEFTKNAVSLAMARDGSSGGVIRLAIITEGGVER 199
BLAST of mRNA_F-serratus_M_contig994.21233.1 vs. uniprot
Match: A0A4P9YVP1_9FUNG (Proteasome subunit beta n=1 Tax=Syncephalis pseudoplumigaleata TaxID=1712513 RepID=A0A4P9YVP1_9FUNG) HSP 1 Score: 210 bits (534), Expect = 6.670e-60 Identity = 103/199 (51.76%), Postives = 136/199 (68.34%), Query Frame = 2 Query: 173 LATTVVAARFQDGVVIGADSRTSQGNFVANRLTDKITPIYPGIFLARSGSSADSQFVAGVVEAKLEAYRTEFGRAPTVRVAATISRNLCYNNKDQLSAGVICAGWDPREGGSVFSIPQGGSLLELPFAISGSGSVYALGYCDDHLRPGLGRDECVLHVQKALEMALSRDGASGGIIRMCVATRAGVERWTVAPGLLQQR 769 L TT++A F GVV+ ADSRT+ G ++ANR+TDK+T ++ I+ RSGS+AD+Q VA +V L+ Y + APT RVAA++ + LCY NKD LSAG+I AGWD + GG V+ IP GGSL PFAI GSGS Y GYCD R + RDECV + A+ +A++RDG+SGG+IR+ V T GVER VA L ++ Sbjct: 12 LGTTIMAVEFAGGVVVAADSRTTTGAYIANRVTDKLTKVHDRIYCCRSGSAADTQAVADIVHYYLQLYSVQHDEAPTTRVAASLFQELCYKNKDNLSAGIIVAGWDAQHGGQVYGIPLGGSLHRQPFAIGGSGSTYIYGYCDSAYRENMSRDECVEFAKNAVALAMARDGSSGGVIRLAVITEGGVERLFVAGSDLPRK 210
BLAST of mRNA_F-serratus_M_contig994.21233.1 vs. uniprot
Match: A0A1C7N0K9_9FUNG (Proteasome subunit beta n=1 Tax=Choanephora cucurbitarum TaxID=101091 RepID=A0A1C7N0K9_9FUNG) HSP 1 Score: 209 bits (531), Expect = 1.860e-59 Identity = 100/188 (53.19%), Postives = 137/188 (72.87%), Query Frame = 2 Query: 173 LATTVVAARFQDGVVIGADSRTSQGNFVANRLTDKITPIYPGIFLARSGSSADSQFVAGVVEAKLEAYRTEFGRAPTVRVAATISRNLCYNNKDQLSAGVICAGWDPREGGSVFSIPQGGSLLELPFAISGSGSVYALGYCDDHLRPGLGRDECVLHVQKALEMALSRDGASGGIIRMCVATRAGVER 736 L T+++A F+DGV++GADSRT+ G ++ANR+TDK+T ++ I+ RSGS+AD+Q VA +V L+ Y AP+VR AA + + LCY NKD LSAGVI AGWD +EG V++IP GGSL + PFAI GSGS Y GYCD + + + R+EC+ V+ +L +A+SRDG+SGG+IR+ V TR GVER Sbjct: 10 LGTSIMAVAFKDGVILGADSRTTTGAYIANRVTDKLTKVHDTIYCCRSGSAADTQAVADIVHYYLQMYTASENEAPSVRTAAALFQELCYQNKDNLSAGVIVAGWDKKEGPCVYNIPLGGSLHKQPFAIGGSGSTYIYGYCDAYYKDDMSREECLEFVKNSLALAMSRDGSSGGVIRLAVITREGVER 197 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig994.21233.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig994.21233.1 >prot_F-serratus_M_contig994.21233.1 ID=prot_F-serratus_M_contig994.21233.1|Name=mRNA_F-serratus_M_contig994.21233.1|organism=Fucus serratus male|type=polypeptide|length=259bp MVKGNALYLFIFTTVSWSQSTFRMSLGIFGLMVLMPTLCMLLSTRDVLATback to top mRNA from alignment at F-serratus_M_contig994:255699..260171- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig994.21233.1 ID=mRNA_F-serratus_M_contig994.21233.1|Name=mRNA_F-serratus_M_contig994.21233.1|organism=Fucus serratus male|type=mRNA|length=4473bp|location=Sequence derived from alignment at F-serratus_M_contig994:255699..260171- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig994:255699..260171- >mRNA_F-serratus_M_contig994.21233.1 ID=mRNA_F-serratus_M_contig994.21233.1|Name=mRNA_F-serratus_M_contig994.21233.1|organism=Fucus serratus male|type=CDS|length=1554bp|location=Sequence derived from alignment at F-serratus_M_contig994:255699..260171- (Fucus serratus male)back to top |