mRNA_F-serratus_M_contig994.21228.1 (mRNA) Fucus serratus male
Overview
Homology
BLAST of mRNA_F-serratus_M_contig994.21228.1 vs. uniprot
Match: D8LEJ6_ECTSI (p28, 28 kDa light chain of axonemal inner dynein arms n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEJ6_ECTSI) HSP 1 Score: 320 bits (821), Expect = 5.440e-106 Identity = 177/284 (62.32%), Postives = 200/284 (70.42%), Query Frame = 1 Query: 28 MDLDTRKVPEVTGVENLMQFPEQIPPTLVKYDPPIFAGLEPFHGPDSHSDSKGLATATDGEREQITGAGGGTMGGRDGRGHKIPRADGQGKTSQLDDMVNSMLPPREWTEETGTWIQYVSKDPATRLAVITLQEKLDKKLQERQALETGICPVREDLYTQAFDELIRQVTLDGPERGLLCLRVRDEIRMTIDAYKTLFDSSVTFGIKKQLQAEQGMTEMEESISHLEEGKXXXXLXXXXXXXXXXXXXXXXXXXXXXXKQKRQEEVDFLKYHGQHLESFLKQLG 879 MD++ + P++T + MQFP ++P TLVK+DPPIFAGLEP P++ D+ L G MGG+ QGK SQLDDMVNSMLPPREWTEETGTW+QYVSK+PATRLAVI LQE+LD KL ERQALETGICPVREDLYTQAFDELIR VTLDGPERGLLCLRVRDEIRMTIDAYKTL+DSSVTFG+KKQLQAEQGM EMEE I+ L E K L +KR+EEVDFLKY GQHL+SFLKQ+G Sbjct: 1 MDVNVGRGPDMT--QQGMQFPMEVPQTLVKFDPPIFAGLEPSSDPNNGGDNALLMGGNGGXXXXXXXX----MGGK----------GQQGKASQLDDMVNSMLPPREWTEETGTWMQYVSKEPATRLAVIALQEQLDNKLLERQALETGICPVREDLYTQAFDELIRHVTLDGPERGLLCLRVRDEIRMTIDAYKTLYDSSVTFGVKKQLQAEQGMAEMEEQIAALGEDKKGLELHVSELRNKVEVIEKGESERRAVDDKKRKEEVDFLKYQGQHLDSFLKQIG 268
BLAST of mRNA_F-serratus_M_contig994.21228.1 vs. uniprot
Match: A0A835YSJ6_9STRA (p28 protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSJ6_9STRA) HSP 1 Score: 271 bits (694), Expect = 2.920e-87 Identity = 151/271 (55.72%), Postives = 177/271 (65.31%), Query Frame = 1 Query: 67 VENLMQFPEQIPPTLVKYDPPIFAGLEPFHGPDSHSDSKGLATATDGEREQITGAGGGTMGGRDGRGHKIPRADGQGKTSQLDDMVNSMLPPREWTEETGTWIQYVSKDPATRLAVITLQEKLDKKLQERQALETGICPVREDLYTQAFDELIRQVTLDGPERGLLCLRVRDEIRMTIDAYKTLFDSSVTFGIKKQLQAEQGMTEMEESISHLEEGKXXXXLXXXXXXXXXXXXXXXXXXXXXXXKQKRQEEVDFLKYHGQHLESFLKQLG 879 +E L Q P +P +LV+YD PIF G+EP G H G A+++ +QL+DM+NSMLPPREWTEETGTW+Q VSK+PATRL V+TLQE LDKKL ERQA +TGICPVR+DLY+QAFDELIRQVTLDGPERGLL LRVRDEIRMTIDAY+TL+DSSV FGIKKQLQAEQGM EME I+ LEE K ++R+EEV+FLKY GQHL+SFLKQ+G Sbjct: 1 MEALAQHPNAVPDSLVRYDQPIFGGVEPATG---HG-GNGTASSS---------------------------------IAQLEDMMNSMLPPREWTEETGTWMQCVSKNPATRLDVVTLQECLDKKLGERQARDTGICPVRDDLYSQAFDELIRQVTLDGPERGLLLLRVRDEIRMTIDAYRTLYDSSVVFGIKKQLQAEQGMDEMEAEIAQLEESKQALEYRAQELRNRVELMEKREAEQRSVEDKRRREEVEFLKYQGQHLDSFLKQIG 234
BLAST of mRNA_F-serratus_M_contig994.21228.1 vs. uniprot
Match: A0A7S2CCB2_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CCB2_9STRA) HSP 1 Score: 259 bits (661), Expect = 2.940e-82 Identity = 147/265 (55.47%), Postives = 166/265 (62.64%), Query Frame = 1 Query: 100 PPTLVKYDPPIFAGLEPFHGPDSHSDSKGLATATDGEREQITGAGGGTMGGRDGRGHKIPRADGQGKTSQLDDMVNSMLPPREWTEETGTWIQYVSKDPATRLAVITLQEKLDKKLQERQALETGICPVREDLYTQAFDELIRQVTLDGPERGLLCLRVRDEIRMTIDAYKTLFDSSVTFGIKKQLQAEQGMTEMEESISHLEEGKXXXXLXXXXXXXXXXXXXXXXXXXXXXXKQKRQEEVDFLKYHGQHLESFLKQLGRRGGK 894 P LVKYDP +F G +P D + K AT SQLDDMVNSMLPPREWT+E+GTW+QYVSKD ATRL VI LQE LDK+L ERQA ETGICPVREDLY+Q FDELIRQVTLDGPERGLL LRVRDEI+MTIDAYK L++SSVTFG++KQLQAEQGM E+E I LE K +KR+EE+DFLKY GQHL+SFL+QLG GGK Sbjct: 12 PDALVKYDPALFVGFDPATN-DVKATRKADATP-----------------------------------SQLDDMVNSMLPPREWTQESGTWMQYVSKDSATRLDVINLQEMLDKRLLERQARETGICPVREDLYSQCFDELIRQVTLDGPERGLLTLRVRDEIKMTIDAYKILYESSVTFGVRKQLQAEQGMAELESEIEGLEAAKKELENQVLELRNKVEVSEKRGNERKTLEDKKRKEEIDFLKYQGQHLDSFLRQLG--GGK 238
BLAST of mRNA_F-serratus_M_contig994.21228.1 vs. uniprot
Match: A0A7S2UXS2_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UXS2_9STRA) HSP 1 Score: 253 bits (646), Expect = 8.600e-80 Identity = 141/270 (52.22%), Postives = 173/270 (64.07%), Query Frame = 1 Query: 70 ENLMQFPEQIPPTLVKYDPPIFAGLEPFHGPDSHSDSKGLATATDGEREQITGAGGGTMGGRDGRGHKIPRADGQGKTSQLDDMVNSMLPPREWTEETGTWIQYVSKDPATRLAVITLQEKLDKKLQERQALETGICPVREDLYTQAFDELIRQVTLDGPERGLLCLRVRDEIRMTIDAYKTLFDSSVTFGIKKQLQAEQGMTEMEESISHLEEGKXXXXLXXXXXXXXXXXXXXXXXXXXXXXKQKRQEEVDFLKYHGQHLESFLKQLG 879 E Q P P +LVK+D P+F GL+P SH+ + +A +ADG SQ+DDM+NSM+PPREWT+ +GTW+QY+SK+ ATRL VITLQE+LDK+L ERQA ET ICPVREDLY+Q FDELIR VTLD PERGLL LRVRDEIRMTIDAYKTL+DSSVTFGIKKQLQAE GM++ME+ I+ LE K ++KR+EE+DFLKY GQHL++ +K +G Sbjct: 12 EGEQQDPANPPESLVKFDEPLFVGLQPS----SHTKAAAIANI---------------------------KADGA-NASQIDDMMNSMIPPREWTDVSGTWMQYISKESATRLDVITLQEQLDKRLVERQARETDICPVREDLYSQCFDELIRHVTLDSPERGLLLLRVRDEIRMTIDAYKTLYDSSVTFGIKKQLQAEMGMSDMEKQIAILELTKKERENKTLELRNKLEVIEKREVERRGLEEKKRKEEIDFLKYQGQHLDTSIKHVG 249
BLAST of mRNA_F-serratus_M_contig994.21228.1 vs. uniprot
Match: A0A6V1KR45_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1KR45_HETAK) HSP 1 Score: 251 bits (642), Expect = 3.130e-79 Identity = 141/271 (52.03%), Postives = 166/271 (61.25%), Query Frame = 1 Query: 70 ENLMQFPEQIPPTLVKYDPPIFAGLEPFHGPDSHSDSKGLATATDGEREQITGAGGGTMGGRDGRGHKIPRAD-GQGKTSQLDDMVNSMLPPREWTEETGTWIQYVSKDPATRLAVITLQEKLDKKLQERQALETGICPVREDLYTQAFDELIRQVTLDGPERGLLCLRVRDEIRMTIDAYKTLFDSSVTFGIKKQLQAEQGMTEMEESISHLEEGKXXXXLXXXXXXXXXXXXXXXXXXXXXXXKQKRQEEVDFLKYHGQHLESFLKQLG 879 +N Q P P +L+K+D PIF GL+P + G K+P A G+ +QLDDM+NSMLPPREWTEE+GTW+QY+SK+PATRL VITLQE LDK L ERQA ETGICPVREDLY+QAFDELIR VTLD PERGLL LR RDE+RMT+DAYKTL+ SSVTFG+KKQLQAE GM+EM I L E + Q R+ E+DFLKY GQHL+ FLK +G Sbjct: 9 DNGGQGPANPPESLLKFDEPIFVGLQPSN---------------------------------QNEGFKMPEAPKGELTNAQLDDMLNSMLPPREWTEESGTWMQYISKEPATRLDVITLQEHLDKCLVERQARETGICPVREDLYSQAFDELIRHVTLDSPERGLLLLRARDEVRMTVDAYKTLYGSSVTFGVKKQLQAELGMSEMANQIEALGEARRARERRCAELRARLDAAEKRAAERQQLEGQARRAEIDFLKYQGQHLDGFLKHVG 246
BLAST of mRNA_F-serratus_M_contig994.21228.1 vs. uniprot
Match: F0Y5N0_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y5N0_AURAN) HSP 1 Score: 238 bits (606), Expect = 1.300e-74 Identity = 120/192 (62.50%), Postives = 143/192 (74.48%), Query Frame = 1 Query: 319 MVNSMLPPREWTEETGTWIQYVSKDPATRLAVITLQEKLDKKLQERQALETGICPVREDLYTQAFDELIRQVTLDGPERGLLCLRVRDEIRMTIDAYKTLFDSSVTFGIKKQLQAEQGMTEMEESISHLEEGKXXXXLXXXXXXXXXXXXXXXXXXXXXXXKQKRQEEVDFLKYHGQHLESFLKQLGRRGGK 894 MVNSMLPPREWT+ +GTW+QYVSK ATR+ VI+LQE LDK+L +RQA + GICPVREDLY+Q +DELIRQ+TLDGPERGLL LRVRDEIRMTIDAYK L+DSSVTFGI+KQLQAEQGM+E+E I+ LE +KR++E+DFLKY GQHL++FL+QLG GGK Sbjct: 1 MVNSMLPPREWTQTSGTWMQYVSKKTATRMDVISLQEDLDKRLLDRQARDAGICPVREDLYSQCYDELIRQITLDGPERGLLLLRVRDEIRMTIDAYKVLYDSSVTFGIRKQLQAEQGMSELEGRIAELEAENKDLENQVLELRNGVEVIEKRENEHKAVEDKKRKDEIDFLKYQGQHLDAFLRQLGPVGGK 192
BLAST of mRNA_F-serratus_M_contig994.21228.1 vs. uniprot
Match: A0A8J2S909_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2S909_9STRA) HSP 1 Score: 235 bits (599), Expect = 5.880e-73 Identity = 132/260 (50.77%), Postives = 159/260 (61.15%), Query Frame = 1 Query: 100 PPTLVKYDPPIFAGLEPFHGPDSHSDSKGLATATDGEREQITGAGGGTMGGRDGRGHKIPRADGQGKTSQLDDMVNSMLPPREWTEETGTWIQYVSKDPATRLAVITLQEKLDKKLQERQALETGICPVREDLYTQAFDELIRQVTLDGPERGLLCLRVRDEIRMTIDAYKTLFDSSVTFGIKKQLQAEQGMTEMEESISHLEEGKXXXXLXXXXXXXXXXXXXXXXXXXXXXXKQKRQEEVDFLKYHGQHLESFLKQLG 879 P +L+K+D P+F G F G DS + + T AGG QL +MVNSMLPPREWTE TGTW+QYVSK PA+R VI +QE LD KL ERQA + GICPVREDLY Q FDELIRQ+TLDGPERGLL LRVRDE+RMT+DAYK L+DSSVTFG++KQLQAEQGM E++ ++ LE +KR++E+DFLKY GQHL+ FL+QLG Sbjct: 10 PASLLKHDEPLFVG---FDGADSAA-------------KPGTAAGG-----------------------QLGEMVNSMLPPREWTEPTGTWMQYVSKAPASRTDVIAMQEALDAKLLERQARDAGICPVREDLYAQCFDELIRQLTLDGPERGLLLLRVRDEVRMTVDAYKVLYDSSVTFGVRKQLQAEQGMAELQGRVAELEAENKDLENRVLELRNGVEVVEKRASEHKAMADKKRKDEIDFLKYQGQHLDQFLRQLG 230
BLAST of mRNA_F-serratus_M_contig994.21228.1 vs. uniprot
Match: A0A7S1GAQ8_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1GAQ8_9STRA) HSP 1 Score: 224 bits (571), Expect = 1.300e-68 Identity = 115/194 (59.28%), Postives = 138/194 (71.13%), Query Frame = 1 Query: 310 LDDMVNSMLPPREWTEE-TGTWIQYVSKDPATRLAVITLQEKLDKKLQERQALETGICPVREDLYTQAFDELIRQVTLDGPERGLLCLRVRDEIRMTIDAYKTLFDSSVTFGIKKQLQAEQGMTEMEESISHLEEGKXXXXLXXXXXXXXXXXXXXXXXXXXXXXKQKRQEEVDFLKYHGQHLESFLKQLGRRG 888 +++++NS+LPPR W +E W+QYVSK PA+RL VI LQE LD+KL ERQA E GICPVREDLY+Q FDELIRQVT++ PERGLL LRVRDEIRMTIDAYKTL++SSVTFG++KQLQAEQG+ EME I L E K ++KR+EE+DFLKY GQHL+ FLK LG G Sbjct: 49 IEEVLNSILPPRMWADEGAADWMQYVSKTPASRLDVINLQEALDEKLMERQAREMGICPVREDLYSQCFDELIRQVTINSPERGLLLLRVRDEIRMTIDAYKTLYESSVTFGVRKQLQAEQGLAEMESKIEELSEAKKDLQNQVLELRNKVEVIEKRATERRQLEEKKRKEEIDFLKYQGQHLDQFLKTLGGPG 242
BLAST of mRNA_F-serratus_M_contig994.21228.1 vs. uniprot
Match: A0A812WGS2_SYMMI (Hypothetical protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812WGS2_SYMMI) HSP 1 Score: 222 bits (566), Expect = 1.320e-68 Identity = 110/186 (59.14%), Postives = 136/186 (73.12%), Query Frame = 1 Query: 319 MVNSMLPPREWTEETGTWIQYVSKDPATRLAVITLQEKLDKKLQERQALETGICPVREDLYTQAFDELIRQVTLDGPERGLLCLRVRDEIRMTIDAYKTLFDSSVTFGIKKQLQAEQGMTEMEESISHLEEGKXXXXLXXXXXXXXXXXXXXXXXXXXXXXKQKRQEEVDFLKYHGQHLESFLKQL 876 M+ ++LPPREW EE+G W+Q + KDPATRL VI+LQEKLDKKL ER+A ETGICPVRE+LY+Q FDELIRQV LD PERGLL +R RDE++MTIDAYKTL+ SSVTFGIKKQL+AEQG+ +EE + L++ L ++KR+EE+DFLKY GQHL+SF KQ+ Sbjct: 1 MIAAVLPPREWIEESGVWMQNICKDPATRLDVISLQEKLDKKLSERKARETGICPVREELYSQCFDELIRQVALDSPERGLLLMRTRDEVKMTIDAYKTLYSSSVTFGIKKQLRAEQGIPALEEQANELQKTNSQLELEVQELRSKLEIIEKREAERRTTEEKKRKEELDFLKYQGQHLDSFTKQM 186
BLAST of mRNA_F-serratus_M_contig994.21228.1 vs. uniprot
Match: A0A0G4FKQ2_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4FKQ2_9ALVE) HSP 1 Score: 214 bits (544), Expect = 1.910e-64 Identity = 127/258 (49.22%), Postives = 155/258 (60.08%), Query Frame = 1 Query: 106 TLVKYDPPIFAGLEPFHGPD-SHSDSKGLATATDGEREQITGAGGGTMGGRDGRGHKIPRADGQGKTSQLDDMVNSMLPPREWTEETGTWIQYVSKDPATRLAVITLQEKLDKKLQERQALETGICPVREDLYTQAFDELIRQVTLDGPERGLLCLRVRDEIRMTIDAYKTLFDSSVTFGIKKQLQAEQGMTEMEESISHLEEGKXXXXLXXXXXXXXXXXXXXXXXXXXXXXKQKRQEEVDFLKYHGQHLESFLKQL 876 +LV+YDPP+ G P + SD K L T+ + Q++ K + G +D+++++LPPREW E +IQYVS ATRL VI LQE LD++L ERQA E GICPVRE+LY+QAFDELIRQVT+D PERGLL L+VRDEIRMTI AY+TL+ SSVTFG +KQLQAEQG E E I LE K K+KRQEE+DFLK+ GQHLE FLKQL Sbjct: 10 SLVRYDPPLELGPAPAPSEGMTTSDPKKLQTSV---KAQLS---------------KKVQTPHVGSRPSTEDILHAVLPPREWAEGGRHYIQYVSSQAATRLDVIQLQEALDQRLMERQAREAGICPVREELYSQAFDELIRQVTIDCPERGLLLLKVRDEIRMTIGAYQTLYQSSVTFGTRKQLQAEQGKAETEAHIQELETTKKDLEARVVELRNKCEAIERREAERATFEKKKRQEEIDFLKHQGQHLEHFLKQL 249 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig994.21228.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig994.21228.1 >prot_F-serratus_M_contig994.21228.1 ID=prot_F-serratus_M_contig994.21228.1|Name=mRNA_F-serratus_M_contig994.21228.1|organism=Fucus serratus male|type=polypeptide|length=290bp MDLDTRKVPEVTGVENLMQFPEQIPPTLVKYDPPIFAGLEPFHGPDSHSDback to top mRNA from alignment at F-serratus_M_contig994:67956..72155- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig994.21228.1 ID=mRNA_F-serratus_M_contig994.21228.1|Name=mRNA_F-serratus_M_contig994.21228.1|organism=Fucus serratus male|type=mRNA|length=4200bp|location=Sequence derived from alignment at F-serratus_M_contig994:67956..72155- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig994:67956..72155- >mRNA_F-serratus_M_contig994.21228.1 ID=mRNA_F-serratus_M_contig994.21228.1|Name=mRNA_F-serratus_M_contig994.21228.1|organism=Fucus serratus male|type=CDS|length=1740bp|location=Sequence derived from alignment at F-serratus_M_contig994:67956..72155- (Fucus serratus male)back to top |