mRNA_F-serratus_M_contig994.21228.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig994.21228.1
Unique NamemRNA_F-serratus_M_contig994.21228.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
[Close]
BLAST of mRNA_F-serratus_M_contig994.21228.1 vs. uniprot
Match: A0A7S2AYM5_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AYM5_9STRA)

HSP 1 Score: 201 bits (511), Expect = 1.510e-59
Identity = 128/266 (48.12%), Postives = 165/266 (62.03%), Query Frame = 1 
Query:  100 PPTLVKYDPPIFAGLEPFHGPDSHSDSKGLATATDGEREQITGAGGGTMGGRDGRGHKIPRADGQGKTSQLDDMVNSMLPPREWTEETGTWIQYVSKDPATRLAVITLQEKLDKKLQERQALETGICPVREDLYTQAFDELIRQVTLDGPERGLLCLRVRDEIRMTIDAYKTLFDSSVTFGIKKQLQAEQGMTEMEESISHLEEGKXXXXLXXXXXXXXXXXXXXXXXXXXXXXKQ-KRQEEVDFLKYHGQHLESFLKQLGRRGGK 894
            P +LVKY+ P++ G +P  G    S  K                                    +  ++QLDDMVNS+LPPREWTEE+GTW+QYVSK PATRL V +LQ++LD+K+  RQA + G+C VREDLYTQ F+E IRQVTL+ PE GLL LRVRDE++MTIDA+K L  SS TFG++K LQAEQGM+E+E  I  L    XXXX XXXXXXXX               ++ +R EE++FLK  G+H ++ ++QL   GGK
Sbjct:   19 PDSLVKYETPLYVGFDPSSGETGDSTWK------------------------------------KPSSNQLDDMVNSILPPREWTEESGTWMQYVSKQPATRLDVASLQQELDEKIAARQARDKGLCLVREDLYTQCFNETIRQVTLESPEHGLLLLRVRDELKMTIDAHKLLCASSDTFGVRKLLQAEQGMSELESQIETLXXXXXXXXXXXXXXXXXVELTEKRAVERQIQAERAQRSEEIEFLKGQGRHFDTIIRQLN--GGK 246
[Close]
BLAST of mRNA_F-serratus_M_contig994.21228.1 vs. uniprot
Match: F0W747_9STRA (Dynein light chain intermediate polypeptide putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W747_9STRA)

HSP 1 Score: 200 bits (509), Expect = 2.920e-59
Identity = 99/200 (49.50%), Postives = 135/200 (67.50%), Query Frame = 1 
Query:  289 GQGKTSQLDDMVNSMLPPREWTEETGTWIQYVSKDPATRLAVITLQEKLDKKLQERQALETGICPVREDLYTQAFDELIRQVTLDGPERGLLCLRVRDEIRMTIDAYKTLFDSSVTFGIKKQLQAEQGMTEMEESISHLEEGKXXXXLXXXXXXXXXXXXXXXXXXXXXXXKQKRQEEVDFLKYHGQHLESFLKQLGRRG 888
            G    ++++D++ +MLPP+ W EE+G W++YVS  P+TRL VI LQE++D  L +RQA + GICPVRED+Y Q FDELIRQVT++ PE+GLL LR+RDE+R+TIDAYK LF+SS+ FGI+KQLQAE+G  +++E ++ L + K                             +K +EEVDFLKY  QHLE+FLK  G  G
Sbjct:   41 GDNSFNRIEDVLQAMLPPQMWHEESGYWLRYVSPCPSTRLDVIKLQEEIDTTLSKRQAKDCGICPVREDIYAQCFDELIRQVTINSPEQGLLLLRIRDELRLTIDAYKMLFESSILFGIRKQLQAEEGTGDIQEKLNDLAKEKHDSECKLMSLSNKLELIEKRAGERKAMQDKKNKEEVDFLKYQNQHLEAFLKAAGSGG 240
[Close]
BLAST of mRNA_F-serratus_M_contig994.21228.1 vs. uniprot
Match: A0A8K1C6X6_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C6X6_PYTOL)

HSP 1 Score: 200 bits (509), Expect = 3.100e-59
Identity = 105/202 (51.98%), Postives = 138/202 (68.32%), Query Frame = 1 
Query:  283 ADGQGKTS--QLDDMVNSMLPPREWTEE-TGTWIQYVSKDPATRLAVITLQEKLDKKLQERQALETGICPVREDLYTQAFDELIRQVTLDGPERGLLCLRVRDEIRMTIDAYKTLFDSSVTFGIKKQLQAEQGMTEMEESISHLEEGKXXXXLXXXXXXXXXXXXXXXXXXXXXXXKQKRQEEVDFLKYHGQHLESFLKQLG 879
            A+G  K S  +++D++ +MLPP+ W EE TG W++YVS  P+TR  VI LQE++D KL +RQA E GICPVRED+Y Q FDELIR+V ++ PERGLL LRVRDEIR+T DAYKTL++SS+TFGI+KQLQAE+GM ++ E I+ L+  K                             +K +EE+DFLKY GQHL++FLK  G
Sbjct:   37 ANGAEKESIQRIEDILKAMLPPQMWHEEDTGYWMRYVSATPSTRFDVIKLQEEMDAKLMKRQARENGICPVREDIYHQCFDELIREVAINSPERGLLLLRVRDEIRLTTDAYKTLYESSITFGIRKQLQAEEGMDQLHERIAALQHEKQEHESKVLELTNRLELIEKRATERRALQDKKFKEELDFLKYQGQHLDAFLKSAG 238
[Close]
BLAST of mRNA_F-serratus_M_contig994.21228.1 vs. uniprot
Match: A0A7S1N962_9EUGL (Hypothetical protein n=2 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1N962_9EUGL)

HSP 1 Score: 199 bits (507), Expect = 4.990e-59
Identity = 114/205 (55.61%), Postives = 142/205 (69.27%), Query Frame = 1 
Query:  262 RGHKIPRADGQGKTSQLDDMVNSMLPPREWTEETGTWIQYVSKDPATRLAVITLQEKLDKKLQERQALETGICPVREDLYTQAFDELIRQVTLDGPERGLLCLRVRDEIRMTIDAYKTLFDSSVTFGIKKQLQAEQGMTEMEESISHLEEGKXXXXLXXXXXXXXXXXXXXXXXXXXXXXKQKRQEEVDFLKYHGQHLESFLKQL 876
            +G K+P  + +   +Q +D++NS+LPPREW EE   WIQYVS  PATRL VI LQE+LD +LQ+RQA ETGICPVRE+LY Q FDELIRQVT++  ERGLL LR+RDEIRMTI AYKTL++SSV FG++K LQAEQG  +M   I  LE  K  XX XXXXXX                 ++K QEEV+FL+   Q L + L+ +
Sbjct:   31 KGAKLPPVESKPSVTQTEDILNSILPPREWEEEGQPWIQYVSSTPATRLDVINLQEQLDMRLQQRQARETGICPVREELYAQCFDELIRQVTVNCAERGLLLLRIRDEIRMTIAAYKTLYESSVAFGMRKALQAEQGKADMLSQIRQLERDKEEXXXXXXXXXAKCEAIEKREIERRQVDEKKHQEEVNFLRKANQQLTTQLQTI 235
[Close]
BLAST of mRNA_F-serratus_M_contig994.21228.1 vs. uniprot
Match: A0A8J5IQC3_9STRA (Uncharacterized protein n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5IQC3_9STRA)

HSP 1 Score: 206 bits (525), Expect = 8.330e-59
Identity = 122/269 (45.35%), Postives = 163/269 (60.59%), Query Frame = 1 
Query:   88 PEQIPPTLVK----YDPPIFAGLEPFHGPDSHSDSKGLATATDGEREQITGAGGGTMGGRDGRGHKIPRADGQGKTSQLDDMVNSMLPPREWTEE-TGTWIQYVSKDPATRLAVITLQEKLDKKLQERQALETGICPVREDLYTQAFDELIRQVTLDGPERGLLCLRVRDEIRMTIDAYKTLFDSSVTFGIKKQLQAEQGMTEMEESISHLEEGKXXXXLXXXXXXXXXXXXXXXXXXXXXXXKQKRQEEVDFLKYHGQHLESFLKQLG 879
            PEQ+   L +    Y  PIF G E    P     SK +  AT       T + G T  G+           G    ++++D++N++LPP+ W+EE +G W++Y S  P+TR  V+ LQE LD KL +RQA E+GICPVREDLY+QAFDELIR+VTL+ PERGLL LRVRDE+R+T DAYKTL+DSS+TFG++KQLQAE GM ++ E I+ L+  K                            ++K +EE+DFLKY GQHL++FLK  G
Sbjct:  227 PEQLSKELTERKRQYGEPIFTG-ETLDPPRKAPSSKSITAAT--VVAAATESAGATANGK-----------GSDGVARVEDILNAILPPQMWSEENSGFWLRYASSVPSTRFDVLKLQEALDAKLLQRQARESGICPVREDLYSQAFDELIREVTLNCPERGLLLLRVRDELRLTTDAYKTLYDSSLTFGVRKQLQAEDGMGDLAEQIASLQRDKEESESNVAELTNKLEVIEKRAAERKALQEKKFKEELDFLKYQGQHLDAFLKSAG 481
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig994.21228.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S2AYM5_9STRA1.510e-5948.12Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
F0W747_9STRA2.920e-5949.50Dynein light chain intermediate polypeptide putati... [more]
A0A8K1C6X6_PYTOL3.100e-5951.98Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A7S1N962_9EUGL4.990e-5955.61Hypothetical protein n=2 Tax=Eutreptiella gymnasti... [more]
A0A8J5IQC3_9STRA8.330e-5945.35Uncharacterized protein n=1 Tax=Phytophthora aleat... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig994contigF-serratus_M_contig994:67956..72155 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score324.7
Seed ortholog evalue4.4e-86
Seed eggNOG ortholog2880.D8LEJ6
KEGG koko:K10410
KEGG Pathwayko05016,map05016
Hectar predicted targeting categoryother localisation
EggNOG free text desc.dynein heavy chain binding
EggNOG OGsKOG4001@1,KOG4001@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko04812
Exons6
Model size1058
Cds size870
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig994.21228.1prot_F-serratus_M_contig994.21228.1Fucus serratus malepolypeptideF-serratus_M_contig994 68117..72128 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932791.3132188-UTR-F-serratus_M_contig994:67955..681161622932791.3132188-UTR-F-serratus_M_contig994:67955..68116Fucus serratus maleUTRF-serratus_M_contig994 67956..68116 -
1690964477.5238287-UTR-F-serratus_M_contig994:67955..681161690964477.5238287-UTR-F-serratus_M_contig994:67955..68116Fucus serratus maleUTRF-serratus_M_contig994 67956..68116 -
1622932791.469198-UTR-F-serratus_M_contig994:72128..721551622932791.469198-UTR-F-serratus_M_contig994:72128..72155Fucus serratus maleUTRF-serratus_M_contig994 72129..72155 -
1690964477.608668-UTR-F-serratus_M_contig994:72128..721551690964477.608668-UTR-F-serratus_M_contig994:72128..72155Fucus serratus maleUTRF-serratus_M_contig994 72129..72155 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932791.3342876-CDS-F-serratus_M_contig994:68116..681321622932791.3342876-CDS-F-serratus_M_contig994:68116..68132Fucus serratus maleCDSF-serratus_M_contig994 68117..68132 -
1690964477.5366302-CDS-F-serratus_M_contig994:68116..681321690964477.5366302-CDS-F-serratus_M_contig994:68116..68132Fucus serratus maleCDSF-serratus_M_contig994 68117..68132 -
1622932791.3530157-CDS-F-serratus_M_contig994:68184..683091622932791.3530157-CDS-F-serratus_M_contig994:68184..68309Fucus serratus maleCDSF-serratus_M_contig994 68185..68309 -
1690964477.5472803-CDS-F-serratus_M_contig994:68184..683091690964477.5472803-CDS-F-serratus_M_contig994:68184..68309Fucus serratus maleCDSF-serratus_M_contig994 68185..68309 -
1622932791.372249-CDS-F-serratus_M_contig994:69454..695171622932791.372249-CDS-F-serratus_M_contig994:69454..69517Fucus serratus maleCDSF-serratus_M_contig994 69455..69517 -
1690964477.558436-CDS-F-serratus_M_contig994:69454..695171690964477.558436-CDS-F-serratus_M_contig994:69454..69517Fucus serratus maleCDSF-serratus_M_contig994 69455..69517 -
1622932791.3951309-CDS-F-serratus_M_contig994:70160..703391622932791.3951309-CDS-F-serratus_M_contig994:70160..70339Fucus serratus maleCDSF-serratus_M_contig994 70161..70339 -
1690964477.5694346-CDS-F-serratus_M_contig994:70160..703391690964477.5694346-CDS-F-serratus_M_contig994:70160..70339Fucus serratus maleCDSF-serratus_M_contig994 70161..70339 -
1622932791.4232793-CDS-F-serratus_M_contig994:70672..707601622932791.4232793-CDS-F-serratus_M_contig994:70672..70760Fucus serratus maleCDSF-serratus_M_contig994 70673..70760 -
1690964477.5801141-CDS-F-serratus_M_contig994:70672..707601690964477.5801141-CDS-F-serratus_M_contig994:70672..70760Fucus serratus maleCDSF-serratus_M_contig994 70673..70760 -
1622932791.4489133-CDS-F-serratus_M_contig994:71729..721281622932791.4489133-CDS-F-serratus_M_contig994:71729..72128Fucus serratus maleCDSF-serratus_M_contig994 71730..72128 -
1690964477.5904307-CDS-F-serratus_M_contig994:71729..721281690964477.5904307-CDS-F-serratus_M_contig994:71729..72128Fucus serratus maleCDSF-serratus_M_contig994 71730..72128 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig994.21228.1

>prot_F-serratus_M_contig994.21228.1 ID=prot_F-serratus_M_contig994.21228.1|Name=mRNA_F-serratus_M_contig994.21228.1|organism=Fucus serratus male|type=polypeptide|length=290bp
MDLDTRKVPEVTGVENLMQFPEQIPPTLVKYDPPIFAGLEPFHGPDSHSD
SKGLATATDGEREQITGAGGGTMGGRDGRGHKIPRADGQGKTSQLDDMVN
SMLPPREWTEETGTWIQYVSKDPATRLAVITLQEKLDKKLQERQALETGI
CPVREDLYTQAFDELIRQVTLDGPERGLLCLRVRDEIRMTIDAYKTLFDS
SVTFGIKKQLQAEQGMTEMEESISHLEEGKKELELQVSELRNKMEVMERE
EAERREMAKQKRQEEVDFLKYHGQHLESFLKQLGRRGGK*
back to top

mRNA from alignment at F-serratus_M_contig994:67956..72155-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig994.21228.1 ID=mRNA_F-serratus_M_contig994.21228.1|Name=mRNA_F-serratus_M_contig994.21228.1|organism=Fucus serratus male|type=mRNA|length=4200bp|location=Sequence derived from alignment at F-serratus_M_contig994:67956..72155- (Fucus serratus male)
TTGATTCGCCGAGACAGAGTCGAACAAATGGATCTCGATACGCGTAAGGT
ACCTGAGGTCACCGGGGTAGAGAATCTGATGCAATTCCCCGAGCAGATCC
CTCCTACGTTGGTCAAGTACGATCCTCCGATCTTTGCCGGTCTCGAGCCT
TTCCATGGACCTGATAGTCACAGTGATAGTAAGGGTCTCGCCACCGCCAC
AGATGGAGAAAGAGAACAGATAACAGGAGCAGGTGGTGGTACTATGGGTG
GACGAGACGGCCGAGGACACAAGATACCCCGCGCAGACGGGCAGGGGAAA
ACATCCCAGTTGGATGATATGGTGAACTCGATGCTGCCACCTCGAGAATG
GACTGAAGAGACGGGGACTTGGATTCAGTACGTGAGCAAGGACCCAGCTA
CCCGGCTGGCGGTCATAACGCTACAGGTGCAAGGGGATGGACGAATCAAA
ATAGGAGATGGACGTAAAGGAATGCCGATTGGGCCATTGAGGCAAAAAAG
GCACCACGAGACAATCGTGCCAGACGAGGGATCTCATAACACCCTTGTAC
CCTCAGGTCGTAAATAAGCCGAAAGAATCCCTACCAAGTTGGGGCCCTTG
AGATCTAATGCGTGCTATATTTTGAGTTCTTGCTTTTAAACGGCAGATCC
AGCGTGAGTATCGTAGCACATGCACTGAATGTGCATCGTTCATACTACTG
CGCAAATAAGGTTTAATGGGTACTATTGGAGGTTCGATCAAACCGTCTAG
AGCTACCCTTTGGCACGCATCATGTACGGGAGTATGGCCTTGAGTTGGGC
AGAAAAAAATGAGCCTCCACCGTCCACGTCTTCTCGAGTCTTTTCGCATC
AACTTTCCTGTTCGGCTCAGTTGCTTTGCGGGCAACTGTCAGTTGTTCAG
CGCCCGAACATAAGAGCGCGAAATGCTCTCAATCAAATCGATGCCGATGA
CACAGGGTGTGAACGCGTTCGTCCATGTTTTCCCTTAAGCATCTCGAAAG
ACTGAAACAAAGGCTTGAAGCCCTCGGTGATGTAAGGACTCGAAGTGTGC
GGAGGCTACCATCCATTACGACCTGCAAACACCGATCACCTCTGTGCGTC
GTAGTATATTTACTATATACTCGTAAAAAGCGACACACTTTGCGAGGAGG
AAATATAGACTACTGGGCGGGTCAAGAGTTGTTCAAATTGCGATTGAGGT
CCACAACGTCTAAAACAGATACTACACACACTACTACATAAGACAATATG
AGCCTACACCTCAAATAATGTACAAACCACCTTAGCTTAGTCCGTCCCAA
CAGTCGGACACCGCTAGGAGACGAAAAAAAAAAAAAAAGCTTTCCGGACT
TGCTTCTTGATGCTCACGTTGCGCGTAATGGCTCCGTGCCGGAAGGAGAA
ACTTGATAAGAAGCTTCAAGAGCGGCAGGCCTTGGAAACGGGGATTTGTC
CCGTTCGCGAAGATCTTTATACCCAGGCCTTCGGTGAGAGCGTGGTTCAG
ATGCGACAAAAACTGTCGCACAACACAGTCGAAGCCAAAAAGGGACGATT
ATTGCGGTGTAGAATTGCGTAAAGCCCAACCTTGTACTCCCTGTCCACCA
CAAAAACAACAACGGGGGTAGCTTAGGGGCGGAAGGCGAAGATCGAACTT
ATGCTTCTGCTTGCTCTACTCTTTCGCGCATGTAAGATCATTGTTGTTAA
TGAAAAATAATTAATATGTCTTGAGGCTGAAATACGTGCCTGACTGATGC
AGCAGTCAGACGCGCATTTCAGCATCAAGACGTGCACGTCAGCAGCAATC
GTGTGCATGCTTGCAGACGAGCTCATCCGGCAAGTGACTCTCGACGGCCC
GGAGCGCGGGCTACTGTGTCTGCGCGTGCGCGACGAGATAAGGATGACAA
TTGACGCTTACAAGACTCTGTTCGATAGCAGCGTGACCTTCGGCATCAAG
AAACAGCTACAGGCGGAACAAGGAATGACCGAAATGGAAGAATCGGTGAG
GGAGAAAAAAGTATGTCCCTGCCTTCTTGCGGCCTCCCTGGCGATCGACG
TTCCGTGACATTATCTACCGTACAGGCCACAAAGTAATACCGTAGTAAGC
GGGGGGAAACCGTAGAGTGGCTAGATCCATGTTGTGGGATACCTCGTGTC
GTGTTCCCTTGGCACCTTCTCTGTGGATTTTGTGGGATCGCATGATCAGA
TTAGCCGAAGGGCGCGAATCTGCTTGCCTCCATTCGGATTTGTAGCCCCC
TTTTGGTACCACCGTGCCTTTGGTACATATATTATGCTTATAATATATCG
TAATAATGCAGTAGTTTTGTCGACCTCGCGGTCCCAGGGTCCTTGGGGTT
TACCCCCGGGACAATAAACTGTTACCGGTGGGACTTGACGTTATGCGGCC
CCCTAACTATATAAGTCTCTATGTAGTTTTGCTGTGCGTCAACAGTCACT
ACGTACCCGCTTGTGGACCCGACGCAAACGAGGTAACCCGACTTTTTTTA
CGCGGCTGGTGTGAAGAAGGTGTGGAAGTTTCAAAAGGGTCTCTCGCTGT
ATTCAGACACGCACACACTCACACCGACACACACCACACCGTTGGCAGCC
GCAATGGCAACCATAACATAACATGTCGCTGTTTCTAGATATCTCACTTG
GAGGAGGGCAAGAAGGAGCTCGAACTTCAAGTATCGGAGCTCCGGAACAA
GGTGATGCTCGTTGGTAATGTAAAGTTAAAGTGACCAAAGGCATTATCAA
CATGTTCTATGCACTACCCGTTCCCTATCTGATCGTGCAGAGCAACACCC
GATAAAGATATGGTACCGTGTAAGAGTACGGCTCCAACGCCTACCGAGTC
GGTGTTTTCGAGGAACGATACACATTAATAATATATTGCATATGATATGT
TGTCGGTCGGTGTTTTGATACGTTTGTGTCACATTGATTGACACGACTGA
GCTATTAGAAGAGTGGTACGTACCATTGTGCCAAAGTAATGAGATATTCG
GTTGGCCTCTTACATCAAGTATTTAAGGCTACTTGTTGGTTGATTCGTAG
CCCTTCCTGTCGAGACGAAGAAGCTATCCTGCCGATTCGATGTGTGATGA
TGGGGGGGCGTTATCAGTGAGTCATGTCTGGTTCGTAGATTCGGTGTTTG
TAGCGTTCGAACACAGCCCAGAGAGCTTACAACCAGTCAAAAAGGTCGGT
CAGAGGTTTGTATTACAATGTAGATCCCCGCGACAGACGAAAGATTGGAA
GAACATGAGAGTGGTGGTTGACCGGCGCGCACGAAGTCTTACCGGGGCAT
GGCACCATGAGCATCACCCACGTAACTTCCCAGAACTCTCGTCTCAAGGA
AACGTTGGTACGACATATTTTTGGGGTCACGGAGGCGTCAGGCTCGTCGC
ATACGGCCTTCCTTGCGCCTTTTTTATGTCCACTCGGTTGAGCTGTCTAT
AGGGCCACACGGACGGACAGCATGTTGTTCATTGTGTGTTCTGCCCGTAT
TAGAATACTTGTGGCGTTAAGAAGAAGGCGGCTGTATCAGGCAGCCGACA
AGCCGGCCCTTGAAATGTTAATCTTGTCCGTACAGCAGACAGGCCCATTT
TCACACAGCATGTATATTTCGCGCCCTCGTCATCAGGTTTATTTTCTTGC
GGTTCGTAATACGCTCGTCTCCGCAATGTCGACGAATCACGGCATGTATA
TATATATATATATACCCTTTTTAACATTTTATTAGCACTCCAGAAAAAAA
AAAGTGAGAGCAAGAGTCGCCAGCAATCAATCGTTCACAACTCGTAACAT
GACCGGAAGCGGTCGTGCCTCGCCGTGCGGCACGCCTCCTCGCCAGATGG
AGGTAATGGAAAGGGAGGAGGCCGAACGGCGGGAGATGGCAAAGCAGAAA
CGCCAAGAGGAGGTGGACTTCCTCAAGTACCACGGGCAGCACCTGGAATC
TTTCCTCAAGCAATTAGGTCGGTGGTGGGTTACTACCACGGACAGCACCT
GGAATTTTCCCTCAAGCAATAAGACGTGGTGGTAAATAGACGTCGATTGA
TCGCGTAGGACACACTCATTGAAAAACATAAGACAAAGGTTACTACCACG
GACAGCAACTGGAATTTTCCCTCAAGCAATTAGGCGGTGGTGGTAAATAG
ACGTCGAGTTGATCGCGTAGGACACATTCATTGAAAAAACATAAGACAAA
back to top

Coding sequence (CDS) from alignment at F-serratus_M_contig994:67956..72155-

>mRNA_F-serratus_M_contig994.21228.1 ID=mRNA_F-serratus_M_contig994.21228.1|Name=mRNA_F-serratus_M_contig994.21228.1|organism=Fucus serratus male|type=CDS|length=1740bp|location=Sequence derived from alignment at F-serratus_M_contig994:67956..72155- (Fucus serratus male)
ATGGATCTCGATACGCGTAAGGTACCTGAGGTCACCGGGGTAGAGAATCT
GATGCAATTCCCCGAGCAGATCCCTCCTACGTTGGTCAAGTACGATCCTC
CGATCTTTGCCGGTCTCGAGCCTTTCCATGGACCTGATAGTCACAGTGAT
AGTAAGGGTCTCGCCACCGCCACAGATGGAGAAAGAGAACAGATAACAGG
AGCAGGTGGTGGTACTATGGGTGGACGAGACGGCCGAGGACACAAGATAC
CCCGCGCAGACGGGCAGGGGAAAACATCCCAGTTGGATGATATGGTGAAC
TCGATGCTGCCACCTCGAGAATGGACTGAAGAGACGGGGACTTGGATTCA
GTACGTGAGCAAGGACCCAGCTACCCGGCTGGCGGTCATAACGCTACAGA
TGGATCTCGATACGCGTAAGGTACCTGAGGTCACCGGGGTAGAGAATCTG
ATGCAATTCCCCGAGCAGATCCCTCCTACGTTGGTCAAGTACGATCCTCC
GATCTTTGCCGGTCTCGAGCCTTTCCATGGACCTGATAGTCACAGTGATA
GTAAGGGTCTCGCCACCGCCACAGATGGAGAAAGAGAACAGATAACAGGA
GCAGGTGGTGGTACTATGGGTGGACGAGACGGCCGAGGACACAAGATACC
CCGCGCAGACGGGCAGGGGAAAACATCCCAGTTGGATGATATGGTGAACT
CGATGCTGCCACCTCGAGAATGGACTGAAGAGACGGGGACTTGGATTCAG
TACGTGAGCAAGGACCCAGCTACCCGGCTGGCGGTCATAACGCTACAGGA
GAAACTTGATAAGAAGCTTCAAGAGCGGCAGGCCTTGGAAACGGGGATTT
GTCCCGTTCGCGAAGATCTTTATACCCAGGCCTTCGGAGAAACTTGATAA
GAAGCTTCAAGAGCGGCAGGCCTTGGAAACGGGGATTTGTCCCGTTCGCG
AAGATCTTTATACCCAGGCCTTCGACGAGCTCATCCGGCAAGTGACTCTC
GACGGCCCGGAGCGCGGGCTACTGTGTCTGCGCGTGCGCGACGAGATAAG
GATGACAATTGACGCTTACAAGACTCTGTTCGATAGCAGCGTGACCTTCG
GCATCAAGAAACAGCTACAGGCGGAACAAGGAATGACCGAAATGGAAGAA
TCGACGAGCTCATCCGGCAAGTGACTCTCGACGGCCCGGAGCGCGGGCTA
CTGTGTCTGCGCGTGCGCGACGAGATAAGGATGACAATTGACGCTTACAA
GACTCTGTTCGATAGCAGCGTGACCTTCGGCATCAAGAAACAGCTACAGG
CGGAACAAGGAATGACCGAAATGGAAGAATCGATATCTCACTTGGAGGAG
GGCAAGAAGGAGCTCGAACTTCAAGTATCGGAGCTCCGGAACAAGATATC
TCACTTGGAGGAGGGCAAGAAGGAGCTCGAACTTCAAGTATCGGAGCTCC
GGAACAAGATGGAGGTAATGGAAAGGGAGGAGGCCGAACGGCGGGAGATG
GCAAAGCAGAAACGCCAAGAGGAGGTGGACTTCCTCAAGTACCACGGGCA
GCACCTGGAATCTTTCCTCAAGCAATTAGGTCGATGGAGGTAATGGAAAG
GGAGGAGGCCGAACGGCGGGAGATGGCAAAGCAGAAACGCCAAGAGGAGG
TGGACTTCCTCAAGTACCACGGGCAGCACCTGGAATCTTTCCTCAAGCAA
TTAGGTCGACGTGGTGGTAAATAGACGTGGTGGTAAATAG
back to top