mRNA_F-serratus_M_contig994.21228.1 (mRNA) Fucus serratus male
Overview
Homology
BLAST of mRNA_F-serratus_M_contig994.21228.1 vs. uniprot
Match: A0A6G0XVN6_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XVN6_9STRA) HSP 1 Score: 212 bits (540), Expect = 4.470e-64 Identity = 116/260 (44.62%), Postives = 154/260 (59.23%), Query Frame = 1 Query: 100 PPTLVKYDPPIFAGLEPFHGPDSHSDSKGLATATDGEREQITGAGGGTMGGRDGRGHKIPRADGQGKTSQLDDMVNSMLPPREWTEETGTWIQYVSKDPATRLAVITLQEKLDKKLQERQALETGICPVREDLYTQAFDELIRQVTLDGPERGLLCLRVRDEIRMTIDAYKTLFDSSVTFGIKKQLQAEQGMTEMEESISHLEEGKXXXXLXXXXXXXXXXXXXXXXXXXXXXXKQKRQEEVDFLKYHGQHLESFLKQLG 879 P +LVK+D PIF G G +H SK S+++D++N+MLP + W E+TG W++YVS +P+TR VI LQE++D KL +RQA E+GICPVRED+Y+Q FDELIRQVT++ PERGLL LR+RDEIRMT DAYKTL+DSS+TFG++KQLQAEQGM +E+ I L E K +++ +EE++FLKY GQHL++FLK G Sbjct: 7 PESLVKFDAPIFTGENHDGGKKTHPTSK------------------------------------IDPVSRIEDVLNAMLPAQSWKEDTGFWMRYVSAEPSTRFDVIKLQEQMDAKLIKRQARESGICPVREDIYSQCFDELIRQVTINSPERGLLLLRIRDEIRMTTDAYKTLYDSSITFGVRKQLQAEQGMGSIEDKILLLTEEKREYENKVLELTNKLEIIEKRSNERRALQEKRYKEEIEFLKYQGQHLDAFLKSAG 230
BLAST of mRNA_F-serratus_M_contig994.21228.1 vs. uniprot
Match: A0A024UH61_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces TaxID=100860 RepID=A0A024UH61_9STRA) HSP 1 Score: 211 bits (537), Expect = 1.340e-63 Identity = 116/263 (44.11%), Postives = 155/263 (58.94%), Query Frame = 1 Query: 100 PPTLVKYDPPIFAGLEPFHGPDSHSDSKGLATATDGEREQITGAGGGTMGGRDGRGHKIPRADGQGKTSQLDDMVNSMLPPREWTEETGTWIQYVSKDPATRLAVITLQEKLDKKLQERQALETGICPVREDLYTQAFDELIRQVTLDGPERGLLCLRVRDEIRMTIDAYKTLFDSSVTFGIKKQLQAEQGMTEMEESISHLEEGKXXXXLXXXXXXXXXXXXXXXXXXXXXXXKQKRQEEVDFLKYHGQHLESFLKQLGRRG 888 P +LVKYD PIF G H++ A G + S+++D++N+MLPP+ W EETG W++Y S +P+TR VI LQE++D KL +RQA E+GIC VRED+Y Q FDELIR+VT++ PERGLL LR+RDEIRMT DAYKTL+DSS+TFG++KQLQAEQGM +E+ I+ L E K +++ +EE++FLKY GQHL++FLK G G Sbjct: 7 PESLVKYDAPIFTG--------EHNEGGKKAKPAPGTKID--------------------------PVSRIEDVLNAMLPPQTWKEETGHWMRYTSAEPSTRFDVIKLQEQMDAKLIKRQARESGICNVREDIYAQCFDELIREVTINSPERGLLLLRIRDEIRMTTDAYKTLYDSSITFGVRKQLQAEQGMGSIEDKIALLAEEKREYENKVLELTNKLEVIEKRGSERRALQEKRYKEEIEFLKYQGQHLDAFLKSAGGAG 235
BLAST of mRNA_F-serratus_M_contig994.21228.1 vs. uniprot
Match: A0A1V9YGG0_9STRA (Dynein light chain intermediate polypeptide n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A1V9YGG0_9STRA) HSP 1 Score: 210 bits (535), Expect = 2.770e-63 Identity = 101/197 (51.27%), Postives = 140/197 (71.07%), Query Frame = 1 Query: 304 SQLDDMVNSMLPPREWTEETGTWIQYVSKDPATRLAVITLQEKLDKKLQERQALETGICPVREDLYTQAFDELIRQVTLDGPERGLLCLRVRDEIRMTIDAYKTLFDSSVTFGIKKQLQAEQGMTEMEESISHLEEGKXXXXLXXXXXXXXXXXXXXXXXXXXXXXKQKRQEEVDFLKYHGQHLESFLKQLGRRGGK 894 ++++D++N+MLPP++W E+TG W++Y S +P+TR VI LQE++D KL +RQA E+GICPVRED+Y Q FDELIR+VT++ PERGLL LR+RDEIRMT DAYKTL++SS+TFG++KQLQAEQGM +E+ I+ L E K +++ +EE++FLKY GQHL++FLK G K Sbjct: 41 ARIEDVLNAMLPPQQWKEDTGYWMRYTSAEPSTRFDVIKLQEQMDAKLIKRQARESGICPVREDIYAQCFDELIREVTINSPERGLLLLRIRDEIRMTTDAYKTLYESSITFGVRKQLQAEQGMGSLEDRIAVLTEEKREFENKVLELTNKLEVIEKRSSERRTLQEKRYKEEIEFLKYQGQHLDAFLKSAGGGASK 237
BLAST of mRNA_F-serratus_M_contig994.21228.1 vs. uniprot
Match: A0A0G4F8G4_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4F8G4_VITBC) HSP 1 Score: 210 bits (534), Expect = 6.450e-63 Identity = 120/257 (46.69%), Postives = 158/257 (61.48%), Query Frame = 1 Query: 106 TLVKYDPPIFAGLEPFHGPDSHSDSKGLATATDGEREQITGAGGGTMGGRDGRGHKIPRADGQGKTSQLDDMVNSMLPPREWTEETGTWIQYVSKDPATRLAVITLQEKLDKKLQERQALETGICPVREDLYTQAFDELIRQVTLDGPERGLLCLRVRDEIRMTIDAYKTLFDSSVTFGIKKQLQAEQGMTEMEESISHLEEGKXXXXLXXXXXXXXXXXXXXXXXXXXXXXKQKRQEEVDFLKYHGQHLESFLKQL 876 +LVKYD P+ G P + + + G + Q+ G+ ++P+ + + +D+++++LPPREW E +IQYVS PATRL VI LQE LD++L ERQA E+GICPVRE+LY Q FDELIRQVT++GPERGLL LRVRD+IRMTI AY+TL+ SSVTFG +KQLQ+EQG +E E+ I LE + K+KRQEE+DFLK+ GQHLE+FLK L Sbjct: 10 SLVKYDSPLELGPAPAGQQPGAAKTAAAKKSGAGLKAQL------------GKRVQLPQLESK---PSPEDLLHAILPPREWLETNRHYIQYVSSTPATRLDVIQLQEALDQRLMERQARESGICPVREELYAQTFDELIRQVTINGPERGLLLLRVRDDIRMTIAAYQTLYGSSVTFGTRKQLQSEQGKSETEQMIDELEAQRQQLEAKVVELRNKCEAVERRETERQQILKRKRQEEIDFLKHQGQHLEAFLKGL 251
BLAST of mRNA_F-serratus_M_contig994.21228.1 vs. uniprot
Match: A0A2R5GVY2_9STRA (Axonemal dynein light intermediate polypeptide 1 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GVY2_9STRA) HSP 1 Score: 209 bits (532), Expect = 1.100e-62 Identity = 108/191 (56.54%), Postives = 136/191 (71.20%), Query Frame = 1 Query: 307 QLDDMVNSMLPPREWTE-ETGTWIQYVSKDPATRLAVITLQEKLDKKLQERQALETGICPVREDLYTQAFDELIRQVTLDGPERGLLCLRVRDEIRMTIDAYKTLFDSSVTFGIKKQLQAEQGMTEMEESISHLEEGKXXXXLXXXXXXXXXXXXXXXXXXXXXXXKQKRQEEVDFLKYHGQHLESFLKQL 876 Q D++VNS+LPPR +T+ + W+QY SK+PATRL VI +QE+LD+KL ERQA ++GICPVREDLY QAFDE+IRQVTL+ PERGLL LR RDE RMT+DAYKTL+DSS+ FGI+KQLQAEQGM++ME I LEE ++KR+EE+ FLKY GQ+L+ FLK + Sbjct: 54 QTDEIVNSVLPPRTFTKKDQSKWMQYTSKEPATRLEVIQVQEELDRKLAERQARDSGICPVREDLYRQAFDEIIRQVTLNQPERGLLLLRTRDEARMTVDAYKTLYDSSIVFGIRKQLQAEQGMSDMEAEIKQLEEDCKARENEVLEFRNRVEIMEKREAEIKAISEKKRKEEIAFLKYQGQNLDKFLKSV 244
BLAST of mRNA_F-serratus_M_contig994.21228.1 vs. uniprot
Match: A0A6A4ZGG0_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4ZGG0_9STRA) HSP 1 Score: 213 bits (542), Expect = 5.070e-62 Identity = 119/265 (44.91%), Postives = 156/265 (58.87%), Query Frame = 1 Query: 100 PPTLVKYDPPIFAGLEPFHGPDSHSDSKGLATATDGEREQITGAGGGTMGGRDGRGHKIPRADGQ--GKTSQLDDMVNSMLPPREWTEETGTWIQYVSKDPATRLAVITLQEKLDKKLQERQALETGICPVREDLYTQAFDELIRQVTLDGPERGLLCLRVRDEIRMTIDAYKTLFDSSVTFGIKKQLQAEQGMTEMEESISHLEEGKXXXXLXXXXXXXXXXXXXXXXXXXXXXXKQKRQEEVDFLKYHGQHLESFLKQLGRRG 888 P LVKYD PIF G HS+ G K+ A G S+++D++N+MLPP+ W EETG W++Y S +P+TR VI LQE++D KL +RQA E+GIC VRED+Y Q FDELIR+VT++ PERGLL LR+RDEIRMT DAYKTL+DSS+TFG++KQLQAEQGM +E+ I+ L E K +++ +EE++FLKY GQHL++FLK G G Sbjct: 194 PENLVKYDSPIFTG--------EHSEG----------------------------GKKVKPAPGTKVDPVSRIEDVLNAMLPPQTWKEETGHWMRYTSAEPSTRFDVIKLQEQMDAKLIKRQARESGICHVREDIYAQCFDELIREVTINSPERGLLLLRIRDEIRMTTDAYKTLYDSSITFGVRKQLQAEQGMGSIEDKIALLAEEKREYENKVLELTNKLEVIEKRGSERRALQEKRYKEEIEFLKYQGQHLDAFLKSAGGAG 422
BLAST of mRNA_F-serratus_M_contig994.21228.1 vs. uniprot
Match: G4ZBN4_PHYSP (Uncharacterized protein n=8 Tax=Phytophthora TaxID=4783 RepID=G4ZBN4_PHYSP) HSP 1 Score: 206 bits (524), Expect = 3.650e-61 Identity = 110/215 (51.16%), Postives = 149/215 (69.30%), Query Frame = 1 Query: 283 ADGQGK--TSQLDDMVNSMLPPREWTEE-TGTWIQYVSKDPATRLAVITLQEKLDKKLQERQALETGICPVREDLYTQAFDELIRQVTLDGPERGLLCLRVRDEIRMTIDAYKTLFDSSVTFGIKKQLQAEQGMTEMEESISHLEEGKXXXXLXXXXXXXXXXXXXXXXXXXXXXXKQKRQEEVDFLKYHGQHLESFLKQLGRRGGK*TSIDRVG 918 A+G+G ++++D++N++LPP+ W+EE +G W++Y S P+TR V+ LQE LD KL +RQA E+GICPVREDLY+QAFDELIR+VTL+ PERGLL LRVRDE+R+T DAYKTL+DSS+TFG++KQLQAE GM ++ E I++L+ K ++K +EE+DFLKY GQHL++FLK G GG T I G Sbjct: 59 ANGKGSDGVARVEDVLNAILPPQMWSEENSGFWLRYASSVPSTRFDVLKLQEALDAKLLQRQARESGICPVREDLYSQAFDELIREVTLNCPERGLLLLRVRDELRLTTDAYKTLYDSSLTFGVRKQLQAEDGMGDLAEQIANLQRDKEESESKVAELSNKLEVIEKRAAERKALQEKKFKEELDFLKYQGQHLDAFLKSAG--GGT-TGISAAG 270
BLAST of mRNA_F-serratus_M_contig994.21228.1 vs. uniprot
Match: A0A812YSB7_9DINO (IDA4 protein n=3 Tax=Sar TaxID=2698737 RepID=A0A812YSB7_9DINO) HSP 1 Score: 205 bits (521), Expect = 1.090e-60 Identity = 119/255 (46.67%), Postives = 154/255 (60.39%), Query Frame = 1 Query: 106 TLVKYDPPIFAGLEPFHGPDSHSDSKGLATATDGEREQITGAGGGTMGGRDGRGHKIPRADGQGKTSQLDDMVNSMLPPREWTEETGTWIQYVSKDPATRLAVITLQEKLDKKLQERQALETGICPVREDLYTQAFDELIRQVTLDGPERGLLCLRVRDEIRMTIDAYKTLFDSSVTFGIKKQLQAEQGMTEMEESISHLEEGKXXXXLXXXXXXXXXXXXXXXXXXXXXXXKQKRQEEVDFLKYHGQHLESFLK 870 +LVKYDPP+ G P + + + + T ++P A+ + T DD+++++LPPREW E+ + QYVS PATRL VI LQE LD++L ERQA ETGICPVRE+LY+Q FDELIRQVT++ PERGLL LRVRDEIRM+I AY+TL+ SSVTFG +KQLQ+EQG E E+ I+ EE K ++KR+EE+DFLK+ QHLESFLK Sbjct: 33 SLVKYDPPLELGPAPSDAVGRKGNKPPKPNSLKAQLARKT---------------QLPPAESKPNT---DDVLHALLPPREWIEDGKHYQQYVSNQPATRLDVIQLQEALDQRLMERQARETGICPVREELYSQCFDELIRQVTINCPERGLLLLRVRDEIRMSIAAYQTLYQSSVTFGTRKQLQSEQGKAETEQMIAEHEEQKKQREARVVELKNKCEAIERREAERRAVDERKRKEEIDFLKHQQQHLESFLK 269
BLAST of mRNA_F-serratus_M_contig994.21228.1 vs. uniprot
Match: A0A813L2C0_POLGL (Hypothetical protein n=2 Tax=Alveolata TaxID=33630 RepID=A0A813L2C0_POLGL) HSP 1 Score: 204 bits (518), Expect = 3.460e-60 Identity = 120/255 (47.06%), Postives = 156/255 (61.18%), Query Frame = 1 Query: 106 TLVKYDPPIFAGLEPFHGPDSHSDSKGLATATDGEREQITGAGGGTMGGRDGRGHKIPRADGQGKTSQLDDMVNSMLPPREWTEETGTWIQYVSKDPATRLAVITLQEKLDKKLQERQALETGICPVREDLYTQAFDELIRQVTLDGPERGLLCLRVRDEIRMTIDAYKTLFDSSVTFGIKKQLQAEQGMTEMEESISHLEEGKXXXXLXXXXXXXXXXXXXXXXXXXXXXXKQKRQEEVDFLKYHGQHLESFLK 870 +LVKYDPP+ G P G + +K + + Q+ R ++P + + T DD+++++LPPREW E+ + QYVS ATRL VI LQE LD++L ERQA ETGICPVRE+LY+Q FDELIRQVT++ PERGLL LRVRDEIRM+I AY+TL+ SSVTFG +KQLQ+EQG E E+ I+ EE K ++KR+EE+DFLK+ QHLESFLK Sbjct: 38 SLVKYDPPLELGPAPADGRKGNKAAKPNSL-----KAQLA------------RKAQLPPVESKPNT---DDVLHALLPPREWIEDGKHYSQYVSNQMATRLDVIQLQEALDQRLMERQARETGICPVREELYSQCFDELIRQVTINCPERGLLLLRVRDEIRMSIAAYQTLYQSSVTFGTRKQLQSEQGKAETEQMIAEHEEQKKQREARVVELKNKCEAIERREAERRAVDERKRKEEIDFLKHQQQHLESFLK 272
BLAST of mRNA_F-serratus_M_contig994.21228.1 vs. uniprot
Match: A0A1Q9CG92_SYMMI (28 kDa inner dynein arm light chain, axonemal n=6 Tax=Symbiodinium TaxID=2949 RepID=A0A1Q9CG92_SYMMI) HSP 1 Score: 205 bits (522), Expect = 6.550e-60 Identity = 126/283 (44.52%), Postives = 164/283 (57.95%), Query Frame = 1 Query: 55 EVTGVENL----------MQFPEQIP-PTLVKYDPPIFAGLEPFHGPDSHSDSKGLATATDGEREQITGAGGGTMGGRDGRGHKIPRADGQGKTSQLDDMVNSMLPPREWTEETGTWIQYVSKDPATRLAVITLQEKLDKKLQERQALETGICPVREDLYTQAFDELIRQVTLDGPERGLLCLRVRDEIRMTIDAYKTLFDSSVTFGIKKQLQAEQGMTEMEESISHLEEGKXXXXLXXXXXXXXXXXXXXXXXXXXXXXKQKRQEEVDFLKYHGQHLESFLK 870 E++GV N+ M P P +LVKYDPP+ G P + + + + T ++P A+ + T DD+++++LPPREW E+ + QYVS PATRL VI LQE LD++L ERQA ETGICPVRE+LY+Q FDELIRQVT++ PERGLL LRVRDEIRM+I AY+TL+ SSVTFG +KQLQ+EQG E E+ I+ EE K ++KR+EE+DFLK+ QHLESFLK Sbjct: 79 ELSGVRNICTCLDIAAATMSIPVGRPRESLVKYDPPLELGPAPSDAVGRKGNKPPKPNSLKAQLARKT---------------QLPPAESKPNT---DDVLHALLPPREWIEDGKHYQQYVSNQPATRLDVIQLQEALDQRLMERQARETGICPVREELYSQCFDELIRQVTINCPERGLLLLRVRDEIRMSIAAYQTLYQSSVTFGTRKQLQSEQGKAETEQMIAEHEEQKKQREARVVELKNKCEAIERREAERRAVDERKRKEEIDFLKHQQQHLESFLK 343 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig994.21228.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig994.21228.1 >prot_F-serratus_M_contig994.21228.1 ID=prot_F-serratus_M_contig994.21228.1|Name=mRNA_F-serratus_M_contig994.21228.1|organism=Fucus serratus male|type=polypeptide|length=290bp MDLDTRKVPEVTGVENLMQFPEQIPPTLVKYDPPIFAGLEPFHGPDSHSDback to top mRNA from alignment at F-serratus_M_contig994:67956..72155- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig994.21228.1 ID=mRNA_F-serratus_M_contig994.21228.1|Name=mRNA_F-serratus_M_contig994.21228.1|organism=Fucus serratus male|type=mRNA|length=4200bp|location=Sequence derived from alignment at F-serratus_M_contig994:67956..72155- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig994:67956..72155- >mRNA_F-serratus_M_contig994.21228.1 ID=mRNA_F-serratus_M_contig994.21228.1|Name=mRNA_F-serratus_M_contig994.21228.1|organism=Fucus serratus male|type=CDS|length=1740bp|location=Sequence derived from alignment at F-serratus_M_contig994:67956..72155- (Fucus serratus male)back to top |