mRNA_F-serratus_M_contig994.21228.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig994.21228.1
Unique NamemRNA_F-serratus_M_contig994.21228.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig994.21228.1 vs. uniprot
Match: A0A6G0XVN6_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XVN6_9STRA)

HSP 1 Score: 212 bits (540), Expect = 4.470e-64
Identity = 116/260 (44.62%), Postives = 154/260 (59.23%), Query Frame = 1
Query:  100 PPTLVKYDPPIFAGLEPFHGPDSHSDSKGLATATDGEREQITGAGGGTMGGRDGRGHKIPRADGQGKTSQLDDMVNSMLPPREWTEETGTWIQYVSKDPATRLAVITLQEKLDKKLQERQALETGICPVREDLYTQAFDELIRQVTLDGPERGLLCLRVRDEIRMTIDAYKTLFDSSVTFGIKKQLQAEQGMTEMEESISHLEEGKXXXXLXXXXXXXXXXXXXXXXXXXXXXXKQKRQEEVDFLKYHGQHLESFLKQLG 879
            P +LVK+D PIF G     G  +H  SK                                        S+++D++N+MLP + W E+TG W++YVS +P+TR  VI LQE++D KL +RQA E+GICPVRED+Y+Q FDELIRQVT++ PERGLL LR+RDEIRMT DAYKTL+DSS+TFG++KQLQAEQGM  +E+ I  L E K                            +++ +EE++FLKY GQHL++FLK  G
Sbjct:    7 PESLVKFDAPIFTGENHDGGKKTHPTSK------------------------------------IDPVSRIEDVLNAMLPAQSWKEDTGFWMRYVSAEPSTRFDVIKLQEQMDAKLIKRQARESGICPVREDIYSQCFDELIRQVTINSPERGLLLLRIRDEIRMTTDAYKTLYDSSITFGVRKQLQAEQGMGSIEDKILLLTEEKREYENKVLELTNKLEIIEKRSNERRALQEKRYKEEIEFLKYQGQHLDAFLKSAG 230          
BLAST of mRNA_F-serratus_M_contig994.21228.1 vs. uniprot
Match: A0A024UH61_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces TaxID=100860 RepID=A0A024UH61_9STRA)

HSP 1 Score: 211 bits (537), Expect = 1.340e-63
Identity = 116/263 (44.11%), Postives = 155/263 (58.94%), Query Frame = 1
Query:  100 PPTLVKYDPPIFAGLEPFHGPDSHSDSKGLATATDGEREQITGAGGGTMGGRDGRGHKIPRADGQGKTSQLDDMVNSMLPPREWTEETGTWIQYVSKDPATRLAVITLQEKLDKKLQERQALETGICPVREDLYTQAFDELIRQVTLDGPERGLLCLRVRDEIRMTIDAYKTLFDSSVTFGIKKQLQAEQGMTEMEESISHLEEGKXXXXLXXXXXXXXXXXXXXXXXXXXXXXKQKRQEEVDFLKYHGQHLESFLKQLGRRG 888
            P +LVKYD PIF G         H++    A    G +                              S+++D++N+MLPP+ W EETG W++Y S +P+TR  VI LQE++D KL +RQA E+GIC VRED+Y Q FDELIR+VT++ PERGLL LR+RDEIRMT DAYKTL+DSS+TFG++KQLQAEQGM  +E+ I+ L E K                            +++ +EE++FLKY GQHL++FLK  G  G
Sbjct:    7 PESLVKYDAPIFTG--------EHNEGGKKAKPAPGTKID--------------------------PVSRIEDVLNAMLPPQTWKEETGHWMRYTSAEPSTRFDVIKLQEQMDAKLIKRQARESGICNVREDIYAQCFDELIREVTINSPERGLLLLRIRDEIRMTTDAYKTLYDSSITFGVRKQLQAEQGMGSIEDKIALLAEEKREYENKVLELTNKLEVIEKRGSERRALQEKRYKEEIEFLKYQGQHLDAFLKSAGGAG 235          
BLAST of mRNA_F-serratus_M_contig994.21228.1 vs. uniprot
Match: A0A1V9YGG0_9STRA (Dynein light chain intermediate polypeptide n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A1V9YGG0_9STRA)

HSP 1 Score: 210 bits (535), Expect = 2.770e-63
Identity = 101/197 (51.27%), Postives = 140/197 (71.07%), Query Frame = 1
Query:  304 SQLDDMVNSMLPPREWTEETGTWIQYVSKDPATRLAVITLQEKLDKKLQERQALETGICPVREDLYTQAFDELIRQVTLDGPERGLLCLRVRDEIRMTIDAYKTLFDSSVTFGIKKQLQAEQGMTEMEESISHLEEGKXXXXLXXXXXXXXXXXXXXXXXXXXXXXKQKRQEEVDFLKYHGQHLESFLKQLGRRGGK 894
            ++++D++N+MLPP++W E+TG W++Y S +P+TR  VI LQE++D KL +RQA E+GICPVRED+Y Q FDELIR+VT++ PERGLL LR+RDEIRMT DAYKTL++SS+TFG++KQLQAEQGM  +E+ I+ L E K                            +++ +EE++FLKY GQHL++FLK  G    K
Sbjct:   41 ARIEDVLNAMLPPQQWKEDTGYWMRYTSAEPSTRFDVIKLQEQMDAKLIKRQARESGICPVREDIYAQCFDELIREVTINSPERGLLLLRIRDEIRMTTDAYKTLYESSITFGVRKQLQAEQGMGSLEDRIAVLTEEKREFENKVLELTNKLEVIEKRSSERRTLQEKRYKEEIEFLKYQGQHLDAFLKSAGGGASK 237          
BLAST of mRNA_F-serratus_M_contig994.21228.1 vs. uniprot
Match: A0A0G4F8G4_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4F8G4_VITBC)

HSP 1 Score: 210 bits (534), Expect = 6.450e-63
Identity = 120/257 (46.69%), Postives = 158/257 (61.48%), Query Frame = 1
Query:  106 TLVKYDPPIFAGLEPFHGPDSHSDSKGLATATDGEREQITGAGGGTMGGRDGRGHKIPRADGQGKTSQLDDMVNSMLPPREWTEETGTWIQYVSKDPATRLAVITLQEKLDKKLQERQALETGICPVREDLYTQAFDELIRQVTLDGPERGLLCLRVRDEIRMTIDAYKTLFDSSVTFGIKKQLQAEQGMTEMEESISHLEEGKXXXXLXXXXXXXXXXXXXXXXXXXXXXXKQKRQEEVDFLKYHGQHLESFLKQL 876
            +LVKYD P+  G  P       + +     +  G + Q+            G+  ++P+ + +      +D+++++LPPREW E    +IQYVS  PATRL VI LQE LD++L ERQA E+GICPVRE+LY Q FDELIRQVT++GPERGLL LRVRD+IRMTI AY+TL+ SSVTFG +KQLQ+EQG +E E+ I  LE  +                            K+KRQEE+DFLK+ GQHLE+FLK L
Sbjct:   10 SLVKYDSPLELGPAPAGQQPGAAKTAAAKKSGAGLKAQL------------GKRVQLPQLESK---PSPEDLLHAILPPREWLETNRHYIQYVSSTPATRLDVIQLQEALDQRLMERQARESGICPVREELYAQTFDELIRQVTINGPERGLLLLRVRDDIRMTIAAYQTLYGSSVTFGTRKQLQSEQGKSETEQMIDELEAQRQQLEAKVVELRNKCEAVERRETERQQILKRKRQEEIDFLKHQGQHLEAFLKGL 251          
BLAST of mRNA_F-serratus_M_contig994.21228.1 vs. uniprot
Match: A0A2R5GVY2_9STRA (Axonemal dynein light intermediate polypeptide 1 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GVY2_9STRA)

HSP 1 Score: 209 bits (532), Expect = 1.100e-62
Identity = 108/191 (56.54%), Postives = 136/191 (71.20%), Query Frame = 1
Query:  307 QLDDMVNSMLPPREWTE-ETGTWIQYVSKDPATRLAVITLQEKLDKKLQERQALETGICPVREDLYTQAFDELIRQVTLDGPERGLLCLRVRDEIRMTIDAYKTLFDSSVTFGIKKQLQAEQGMTEMEESISHLEEGKXXXXLXXXXXXXXXXXXXXXXXXXXXXXKQKRQEEVDFLKYHGQHLESFLKQL 876
            Q D++VNS+LPPR +T+ +   W+QY SK+PATRL VI +QE+LD+KL ERQA ++GICPVREDLY QAFDE+IRQVTL+ PERGLL LR RDE RMT+DAYKTL+DSS+ FGI+KQLQAEQGM++ME  I  LEE                              ++KR+EE+ FLKY GQ+L+ FLK +
Sbjct:   54 QTDEIVNSVLPPRTFTKKDQSKWMQYTSKEPATRLEVIQVQEELDRKLAERQARDSGICPVREDLYRQAFDEIIRQVTLNQPERGLLLLRTRDEARMTVDAYKTLYDSSIVFGIRKQLQAEQGMSDMEAEIKQLEEDCKARENEVLEFRNRVEIMEKREAEIKAISEKKRKEEIAFLKYQGQNLDKFLKSV 244          
BLAST of mRNA_F-serratus_M_contig994.21228.1 vs. uniprot
Match: A0A6A4ZGG0_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4ZGG0_9STRA)

HSP 1 Score: 213 bits (542), Expect = 5.070e-62
Identity = 119/265 (44.91%), Postives = 156/265 (58.87%), Query Frame = 1
Query:  100 PPTLVKYDPPIFAGLEPFHGPDSHSDSKGLATATDGEREQITGAGGGTMGGRDGRGHKIPRADGQ--GKTSQLDDMVNSMLPPREWTEETGTWIQYVSKDPATRLAVITLQEKLDKKLQERQALETGICPVREDLYTQAFDELIRQVTLDGPERGLLCLRVRDEIRMTIDAYKTLFDSSVTFGIKKQLQAEQGMTEMEESISHLEEGKXXXXLXXXXXXXXXXXXXXXXXXXXXXXKQKRQEEVDFLKYHGQHLESFLKQLGRRG 888
            P  LVKYD PIF G         HS+                             G K+  A G      S+++D++N+MLPP+ W EETG W++Y S +P+TR  VI LQE++D KL +RQA E+GIC VRED+Y Q FDELIR+VT++ PERGLL LR+RDEIRMT DAYKTL+DSS+TFG++KQLQAEQGM  +E+ I+ L E K                            +++ +EE++FLKY GQHL++FLK  G  G
Sbjct:  194 PENLVKYDSPIFTG--------EHSEG----------------------------GKKVKPAPGTKVDPVSRIEDVLNAMLPPQTWKEETGHWMRYTSAEPSTRFDVIKLQEQMDAKLIKRQARESGICHVREDIYAQCFDELIREVTINSPERGLLLLRIRDEIRMTTDAYKTLYDSSITFGVRKQLQAEQGMGSIEDKIALLAEEKREYENKVLELTNKLEVIEKRGSERRALQEKRYKEEIEFLKYQGQHLDAFLKSAGGAG 422          
BLAST of mRNA_F-serratus_M_contig994.21228.1 vs. uniprot
Match: G4ZBN4_PHYSP (Uncharacterized protein n=8 Tax=Phytophthora TaxID=4783 RepID=G4ZBN4_PHYSP)

HSP 1 Score: 206 bits (524), Expect = 3.650e-61
Identity = 110/215 (51.16%), Postives = 149/215 (69.30%), Query Frame = 1
Query:  283 ADGQGK--TSQLDDMVNSMLPPREWTEE-TGTWIQYVSKDPATRLAVITLQEKLDKKLQERQALETGICPVREDLYTQAFDELIRQVTLDGPERGLLCLRVRDEIRMTIDAYKTLFDSSVTFGIKKQLQAEQGMTEMEESISHLEEGKXXXXLXXXXXXXXXXXXXXXXXXXXXXXKQKRQEEVDFLKYHGQHLESFLKQLGRRGGK*TSIDRVG 918
            A+G+G    ++++D++N++LPP+ W+EE +G W++Y S  P+TR  V+ LQE LD KL +RQA E+GICPVREDLY+QAFDELIR+VTL+ PERGLL LRVRDE+R+T DAYKTL+DSS+TFG++KQLQAE GM ++ E I++L+  K                            ++K +EE+DFLKY GQHL++FLK  G  GG  T I   G
Sbjct:   59 ANGKGSDGVARVEDVLNAILPPQMWSEENSGFWLRYASSVPSTRFDVLKLQEALDAKLLQRQARESGICPVREDLYSQAFDELIREVTLNCPERGLLLLRVRDELRLTTDAYKTLYDSSLTFGVRKQLQAEDGMGDLAEQIANLQRDKEESESKVAELSNKLEVIEKRAAERKALQEKKFKEELDFLKYQGQHLDAFLKSAG--GGT-TGISAAG 270          
BLAST of mRNA_F-serratus_M_contig994.21228.1 vs. uniprot
Match: A0A812YSB7_9DINO (IDA4 protein n=3 Tax=Sar TaxID=2698737 RepID=A0A812YSB7_9DINO)

HSP 1 Score: 205 bits (521), Expect = 1.090e-60
Identity = 119/255 (46.67%), Postives = 154/255 (60.39%), Query Frame = 1
Query:  106 TLVKYDPPIFAGLEPFHGPDSHSDSKGLATATDGEREQITGAGGGTMGGRDGRGHKIPRADGQGKTSQLDDMVNSMLPPREWTEETGTWIQYVSKDPATRLAVITLQEKLDKKLQERQALETGICPVREDLYTQAFDELIRQVTLDGPERGLLCLRVRDEIRMTIDAYKTLFDSSVTFGIKKQLQAEQGMTEMEESISHLEEGKXXXXLXXXXXXXXXXXXXXXXXXXXXXXKQKRQEEVDFLKYHGQHLESFLK 870
            +LVKYDPP+  G  P        +      +   +  + T               ++P A+ +  T   DD+++++LPPREW E+   + QYVS  PATRL VI LQE LD++L ERQA ETGICPVRE+LY+Q FDELIRQVT++ PERGLL LRVRDEIRM+I AY+TL+ SSVTFG +KQLQ+EQG  E E+ I+  EE K                            ++KR+EE+DFLK+  QHLESFLK
Sbjct:   33 SLVKYDPPLELGPAPSDAVGRKGNKPPKPNSLKAQLARKT---------------QLPPAESKPNT---DDVLHALLPPREWIEDGKHYQQYVSNQPATRLDVIQLQEALDQRLMERQARETGICPVREELYSQCFDELIRQVTINCPERGLLLLRVRDEIRMSIAAYQTLYQSSVTFGTRKQLQSEQGKAETEQMIAEHEEQKKQREARVVELKNKCEAIERREAERRAVDERKRKEEIDFLKHQQQHLESFLK 269          
BLAST of mRNA_F-serratus_M_contig994.21228.1 vs. uniprot
Match: A0A813L2C0_POLGL (Hypothetical protein n=2 Tax=Alveolata TaxID=33630 RepID=A0A813L2C0_POLGL)

HSP 1 Score: 204 bits (518), Expect = 3.460e-60
Identity = 120/255 (47.06%), Postives = 156/255 (61.18%), Query Frame = 1
Query:  106 TLVKYDPPIFAGLEPFHGPDSHSDSKGLATATDGEREQITGAGGGTMGGRDGRGHKIPRADGQGKTSQLDDMVNSMLPPREWTEETGTWIQYVSKDPATRLAVITLQEKLDKKLQERQALETGICPVREDLYTQAFDELIRQVTLDGPERGLLCLRVRDEIRMTIDAYKTLFDSSVTFGIKKQLQAEQGMTEMEESISHLEEGKXXXXLXXXXXXXXXXXXXXXXXXXXXXXKQKRQEEVDFLKYHGQHLESFLK 870
            +LVKYDPP+  G  P  G   +  +K  +      + Q+             R  ++P  + +  T   DD+++++LPPREW E+   + QYVS   ATRL VI LQE LD++L ERQA ETGICPVRE+LY+Q FDELIRQVT++ PERGLL LRVRDEIRM+I AY+TL+ SSVTFG +KQLQ+EQG  E E+ I+  EE K                            ++KR+EE+DFLK+  QHLESFLK
Sbjct:   38 SLVKYDPPLELGPAPADGRKGNKAAKPNSL-----KAQLA------------RKAQLPPVESKPNT---DDVLHALLPPREWIEDGKHYSQYVSNQMATRLDVIQLQEALDQRLMERQARETGICPVREELYSQCFDELIRQVTINCPERGLLLLRVRDEIRMSIAAYQTLYQSSVTFGTRKQLQSEQGKAETEQMIAEHEEQKKQREARVVELKNKCEAIERREAERRAVDERKRKEEIDFLKHQQQHLESFLK 272          
BLAST of mRNA_F-serratus_M_contig994.21228.1 vs. uniprot
Match: A0A1Q9CG92_SYMMI (28 kDa inner dynein arm light chain, axonemal n=6 Tax=Symbiodinium TaxID=2949 RepID=A0A1Q9CG92_SYMMI)

HSP 1 Score: 205 bits (522), Expect = 6.550e-60
Identity = 126/283 (44.52%), Postives = 164/283 (57.95%), Query Frame = 1
Query:   55 EVTGVENL----------MQFPEQIP-PTLVKYDPPIFAGLEPFHGPDSHSDSKGLATATDGEREQITGAGGGTMGGRDGRGHKIPRADGQGKTSQLDDMVNSMLPPREWTEETGTWIQYVSKDPATRLAVITLQEKLDKKLQERQALETGICPVREDLYTQAFDELIRQVTLDGPERGLLCLRVRDEIRMTIDAYKTLFDSSVTFGIKKQLQAEQGMTEMEESISHLEEGKXXXXLXXXXXXXXXXXXXXXXXXXXXXXKQKRQEEVDFLKYHGQHLESFLK 870
            E++GV N+          M  P   P  +LVKYDPP+  G  P        +      +   +  + T               ++P A+ +  T   DD+++++LPPREW E+   + QYVS  PATRL VI LQE LD++L ERQA ETGICPVRE+LY+Q FDELIRQVT++ PERGLL LRVRDEIRM+I AY+TL+ SSVTFG +KQLQ+EQG  E E+ I+  EE K                            ++KR+EE+DFLK+  QHLESFLK
Sbjct:   79 ELSGVRNICTCLDIAAATMSIPVGRPRESLVKYDPPLELGPAPSDAVGRKGNKPPKPNSLKAQLARKT---------------QLPPAESKPNT---DDVLHALLPPREWIEDGKHYQQYVSNQPATRLDVIQLQEALDQRLMERQARETGICPVREELYSQCFDELIRQVTINCPERGLLLLRVRDEIRMSIAAYQTLYQSSVTFGTRKQLQSEQGKAETEQMIAEHEEQKKQREARVVELKNKCEAIERREAERRAVDERKRKEEIDFLKHQQQHLESFLK 343          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig994.21228.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6G0XVN6_9STRA4.470e-6444.62Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A024UH61_9STRA1.340e-6344.11Uncharacterized protein n=2 Tax=Aphanomyces TaxID=... [more]
A0A1V9YGG0_9STRA2.770e-6351.27Dynein light chain intermediate polypeptide n=4 Ta... [more]
A0A0G4F8G4_VITBC6.450e-6346.69Uncharacterized protein n=1 Tax=Vitrella brassicaf... [more]
A0A2R5GVY2_9STRA1.100e-6256.54Axonemal dynein light intermediate polypeptide 1 n... [more]
A0A6A4ZGG0_9STRA5.070e-6244.91Uncharacterized protein n=2 Tax=Aphanomyces astaci... [more]
G4ZBN4_PHYSP3.650e-6151.16Uncharacterized protein n=8 Tax=Phytophthora TaxID... [more]
A0A812YSB7_9DINO1.090e-6046.67IDA4 protein n=3 Tax=Sar TaxID=2698737 RepID=A0A81... [more]
A0A813L2C0_POLGL3.460e-6047.06Hypothetical protein n=2 Tax=Alveolata TaxID=33630... [more]
A0A1Q9CG92_SYMMI6.550e-6044.5228 kDa inner dynein arm light chain, axonemal n=6 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig994contigF-serratus_M_contig994:67956..72155 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score324.7
Seed ortholog evalue4.4e-86
Seed eggNOG ortholog2880.D8LEJ6
KEGG koko:K10410
KEGG Pathwayko05016,map05016
Hectar predicted targeting categoryother localisation
EggNOG free text desc.dynein heavy chain binding
EggNOG OGsKOG4001@1,KOG4001@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko04812
Exons6
Model size1058
Cds size870
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig994.21228.1prot_F-serratus_M_contig994.21228.1Fucus serratus malepolypeptideF-serratus_M_contig994 68117..72128 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932791.3132188-UTR-F-serratus_M_contig994:67955..681161622932791.3132188-UTR-F-serratus_M_contig994:67955..68116Fucus serratus maleUTRF-serratus_M_contig994 67956..68116 -
1690964477.5238287-UTR-F-serratus_M_contig994:67955..681161690964477.5238287-UTR-F-serratus_M_contig994:67955..68116Fucus serratus maleUTRF-serratus_M_contig994 67956..68116 -
1622932791.469198-UTR-F-serratus_M_contig994:72128..721551622932791.469198-UTR-F-serratus_M_contig994:72128..72155Fucus serratus maleUTRF-serratus_M_contig994 72129..72155 -
1690964477.608668-UTR-F-serratus_M_contig994:72128..721551690964477.608668-UTR-F-serratus_M_contig994:72128..72155Fucus serratus maleUTRF-serratus_M_contig994 72129..72155 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932791.3342876-CDS-F-serratus_M_contig994:68116..681321622932791.3342876-CDS-F-serratus_M_contig994:68116..68132Fucus serratus maleCDSF-serratus_M_contig994 68117..68132 -
1690964477.5366302-CDS-F-serratus_M_contig994:68116..681321690964477.5366302-CDS-F-serratus_M_contig994:68116..68132Fucus serratus maleCDSF-serratus_M_contig994 68117..68132 -
1622932791.3530157-CDS-F-serratus_M_contig994:68184..683091622932791.3530157-CDS-F-serratus_M_contig994:68184..68309Fucus serratus maleCDSF-serratus_M_contig994 68185..68309 -
1690964477.5472803-CDS-F-serratus_M_contig994:68184..683091690964477.5472803-CDS-F-serratus_M_contig994:68184..68309Fucus serratus maleCDSF-serratus_M_contig994 68185..68309 -
1622932791.372249-CDS-F-serratus_M_contig994:69454..695171622932791.372249-CDS-F-serratus_M_contig994:69454..69517Fucus serratus maleCDSF-serratus_M_contig994 69455..69517 -
1690964477.558436-CDS-F-serratus_M_contig994:69454..695171690964477.558436-CDS-F-serratus_M_contig994:69454..69517Fucus serratus maleCDSF-serratus_M_contig994 69455..69517 -
1622932791.3951309-CDS-F-serratus_M_contig994:70160..703391622932791.3951309-CDS-F-serratus_M_contig994:70160..70339Fucus serratus maleCDSF-serratus_M_contig994 70161..70339 -
1690964477.5694346-CDS-F-serratus_M_contig994:70160..703391690964477.5694346-CDS-F-serratus_M_contig994:70160..70339Fucus serratus maleCDSF-serratus_M_contig994 70161..70339 -
1622932791.4232793-CDS-F-serratus_M_contig994:70672..707601622932791.4232793-CDS-F-serratus_M_contig994:70672..70760Fucus serratus maleCDSF-serratus_M_contig994 70673..70760 -
1690964477.5801141-CDS-F-serratus_M_contig994:70672..707601690964477.5801141-CDS-F-serratus_M_contig994:70672..70760Fucus serratus maleCDSF-serratus_M_contig994 70673..70760 -
1622932791.4489133-CDS-F-serratus_M_contig994:71729..721281622932791.4489133-CDS-F-serratus_M_contig994:71729..72128Fucus serratus maleCDSF-serratus_M_contig994 71730..72128 -
1690964477.5904307-CDS-F-serratus_M_contig994:71729..721281690964477.5904307-CDS-F-serratus_M_contig994:71729..72128Fucus serratus maleCDSF-serratus_M_contig994 71730..72128 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig994.21228.1

>prot_F-serratus_M_contig994.21228.1 ID=prot_F-serratus_M_contig994.21228.1|Name=mRNA_F-serratus_M_contig994.21228.1|organism=Fucus serratus male|type=polypeptide|length=290bp
MDLDTRKVPEVTGVENLMQFPEQIPPTLVKYDPPIFAGLEPFHGPDSHSD
SKGLATATDGEREQITGAGGGTMGGRDGRGHKIPRADGQGKTSQLDDMVN
SMLPPREWTEETGTWIQYVSKDPATRLAVITLQEKLDKKLQERQALETGI
CPVREDLYTQAFDELIRQVTLDGPERGLLCLRVRDEIRMTIDAYKTLFDS
SVTFGIKKQLQAEQGMTEMEESISHLEEGKKELELQVSELRNKMEVMERE
EAERREMAKQKRQEEVDFLKYHGQHLESFLKQLGRRGGK*
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mRNA from alignment at F-serratus_M_contig994:67956..72155-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig994.21228.1 ID=mRNA_F-serratus_M_contig994.21228.1|Name=mRNA_F-serratus_M_contig994.21228.1|organism=Fucus serratus male|type=mRNA|length=4200bp|location=Sequence derived from alignment at F-serratus_M_contig994:67956..72155- (Fucus serratus male)
TTGATTCGCCGAGACAGAGTCGAACAAATGGATCTCGATACGCGTAAGGT ACCTGAGGTCACCGGGGTAGAGAATCTGATGCAATTCCCCGAGCAGATCC CTCCTACGTTGGTCAAGTACGATCCTCCGATCTTTGCCGGTCTCGAGCCT TTCCATGGACCTGATAGTCACAGTGATAGTAAGGGTCTCGCCACCGCCAC AGATGGAGAAAGAGAACAGATAACAGGAGCAGGTGGTGGTACTATGGGTG GACGAGACGGCCGAGGACACAAGATACCCCGCGCAGACGGGCAGGGGAAA ACATCCCAGTTGGATGATATGGTGAACTCGATGCTGCCACCTCGAGAATG GACTGAAGAGACGGGGACTTGGATTCAGTACGTGAGCAAGGACCCAGCTA CCCGGCTGGCGGTCATAACGCTACAGGTGCAAGGGGATGGACGAATCAAA ATAGGAGATGGACGTAAAGGAATGCCGATTGGGCCATTGAGGCAAAAAAG GCACCACGAGACAATCGTGCCAGACGAGGGATCTCATAACACCCTTGTAC CCTCAGGTCGTAAATAAGCCGAAAGAATCCCTACCAAGTTGGGGCCCTTG AGATCTAATGCGTGCTATATTTTGAGTTCTTGCTTTTAAACGGCAGATCC AGCGTGAGTATCGTAGCACATGCACTGAATGTGCATCGTTCATACTACTG CGCAAATAAGGTTTAATGGGTACTATTGGAGGTTCGATCAAACCGTCTAG AGCTACCCTTTGGCACGCATCATGTACGGGAGTATGGCCTTGAGTTGGGC AGAAAAAAATGAGCCTCCACCGTCCACGTCTTCTCGAGTCTTTTCGCATC AACTTTCCTGTTCGGCTCAGTTGCTTTGCGGGCAACTGTCAGTTGTTCAG CGCCCGAACATAAGAGCGCGAAATGCTCTCAATCAAATCGATGCCGATGA CACAGGGTGTGAACGCGTTCGTCCATGTTTTCCCTTAAGCATCTCGAAAG ACTGAAACAAAGGCTTGAAGCCCTCGGTGATGTAAGGACTCGAAGTGTGC GGAGGCTACCATCCATTACGACCTGCAAACACCGATCACCTCTGTGCGTC GTAGTATATTTACTATATACTCGTAAAAAGCGACACACTTTGCGAGGAGG AAATATAGACTACTGGGCGGGTCAAGAGTTGTTCAAATTGCGATTGAGGT CCACAACGTCTAAAACAGATACTACACACACTACTACATAAGACAATATG AGCCTACACCTCAAATAATGTACAAACCACCTTAGCTTAGTCCGTCCCAA CAGTCGGACACCGCTAGGAGACGAAAAAAAAAAAAAAAGCTTTCCGGACT TGCTTCTTGATGCTCACGTTGCGCGTAATGGCTCCGTGCCGGAAGGAGAA ACTTGATAAGAAGCTTCAAGAGCGGCAGGCCTTGGAAACGGGGATTTGTC CCGTTCGCGAAGATCTTTATACCCAGGCCTTCGGTGAGAGCGTGGTTCAG ATGCGACAAAAACTGTCGCACAACACAGTCGAAGCCAAAAAGGGACGATT ATTGCGGTGTAGAATTGCGTAAAGCCCAACCTTGTACTCCCTGTCCACCA CAAAAACAACAACGGGGGTAGCTTAGGGGCGGAAGGCGAAGATCGAACTT ATGCTTCTGCTTGCTCTACTCTTTCGCGCATGTAAGATCATTGTTGTTAA TGAAAAATAATTAATATGTCTTGAGGCTGAAATACGTGCCTGACTGATGC AGCAGTCAGACGCGCATTTCAGCATCAAGACGTGCACGTCAGCAGCAATC GTGTGCATGCTTGCAGACGAGCTCATCCGGCAAGTGACTCTCGACGGCCC GGAGCGCGGGCTACTGTGTCTGCGCGTGCGCGACGAGATAAGGATGACAA TTGACGCTTACAAGACTCTGTTCGATAGCAGCGTGACCTTCGGCATCAAG AAACAGCTACAGGCGGAACAAGGAATGACCGAAATGGAAGAATCGGTGAG GGAGAAAAAAGTATGTCCCTGCCTTCTTGCGGCCTCCCTGGCGATCGACG TTCCGTGACATTATCTACCGTACAGGCCACAAAGTAATACCGTAGTAAGC GGGGGGAAACCGTAGAGTGGCTAGATCCATGTTGTGGGATACCTCGTGTC GTGTTCCCTTGGCACCTTCTCTGTGGATTTTGTGGGATCGCATGATCAGA TTAGCCGAAGGGCGCGAATCTGCTTGCCTCCATTCGGATTTGTAGCCCCC TTTTGGTACCACCGTGCCTTTGGTACATATATTATGCTTATAATATATCG TAATAATGCAGTAGTTTTGTCGACCTCGCGGTCCCAGGGTCCTTGGGGTT TACCCCCGGGACAATAAACTGTTACCGGTGGGACTTGACGTTATGCGGCC CCCTAACTATATAAGTCTCTATGTAGTTTTGCTGTGCGTCAACAGTCACT ACGTACCCGCTTGTGGACCCGACGCAAACGAGGTAACCCGACTTTTTTTA CGCGGCTGGTGTGAAGAAGGTGTGGAAGTTTCAAAAGGGTCTCTCGCTGT ATTCAGACACGCACACACTCACACCGACACACACCACACCGTTGGCAGCC GCAATGGCAACCATAACATAACATGTCGCTGTTTCTAGATATCTCACTTG GAGGAGGGCAAGAAGGAGCTCGAACTTCAAGTATCGGAGCTCCGGAACAA GGTGATGCTCGTTGGTAATGTAAAGTTAAAGTGACCAAAGGCATTATCAA CATGTTCTATGCACTACCCGTTCCCTATCTGATCGTGCAGAGCAACACCC GATAAAGATATGGTACCGTGTAAGAGTACGGCTCCAACGCCTACCGAGTC GGTGTTTTCGAGGAACGATACACATTAATAATATATTGCATATGATATGT TGTCGGTCGGTGTTTTGATACGTTTGTGTCACATTGATTGACACGACTGA GCTATTAGAAGAGTGGTACGTACCATTGTGCCAAAGTAATGAGATATTCG GTTGGCCTCTTACATCAAGTATTTAAGGCTACTTGTTGGTTGATTCGTAG CCCTTCCTGTCGAGACGAAGAAGCTATCCTGCCGATTCGATGTGTGATGA TGGGGGGGCGTTATCAGTGAGTCATGTCTGGTTCGTAGATTCGGTGTTTG TAGCGTTCGAACACAGCCCAGAGAGCTTACAACCAGTCAAAAAGGTCGGT CAGAGGTTTGTATTACAATGTAGATCCCCGCGACAGACGAAAGATTGGAA GAACATGAGAGTGGTGGTTGACCGGCGCGCACGAAGTCTTACCGGGGCAT GGCACCATGAGCATCACCCACGTAACTTCCCAGAACTCTCGTCTCAAGGA AACGTTGGTACGACATATTTTTGGGGTCACGGAGGCGTCAGGCTCGTCGC ATACGGCCTTCCTTGCGCCTTTTTTATGTCCACTCGGTTGAGCTGTCTAT AGGGCCACACGGACGGACAGCATGTTGTTCATTGTGTGTTCTGCCCGTAT TAGAATACTTGTGGCGTTAAGAAGAAGGCGGCTGTATCAGGCAGCCGACA AGCCGGCCCTTGAAATGTTAATCTTGTCCGTACAGCAGACAGGCCCATTT TCACACAGCATGTATATTTCGCGCCCTCGTCATCAGGTTTATTTTCTTGC GGTTCGTAATACGCTCGTCTCCGCAATGTCGACGAATCACGGCATGTATA TATATATATATATACCCTTTTTAACATTTTATTAGCACTCCAGAAAAAAA AAAGTGAGAGCAAGAGTCGCCAGCAATCAATCGTTCACAACTCGTAACAT GACCGGAAGCGGTCGTGCCTCGCCGTGCGGCACGCCTCCTCGCCAGATGG AGGTAATGGAAAGGGAGGAGGCCGAACGGCGGGAGATGGCAAAGCAGAAA CGCCAAGAGGAGGTGGACTTCCTCAAGTACCACGGGCAGCACCTGGAATC TTTCCTCAAGCAATTAGGTCGGTGGTGGGTTACTACCACGGACAGCACCT GGAATTTTCCCTCAAGCAATAAGACGTGGTGGTAAATAGACGTCGATTGA TCGCGTAGGACACACTCATTGAAAAACATAAGACAAAGGTTACTACCACG GACAGCAACTGGAATTTTCCCTCAAGCAATTAGGCGGTGGTGGTAAATAG ACGTCGAGTTGATCGCGTAGGACACATTCATTGAAAAAACATAAGACAAA
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Coding sequence (CDS) from alignment at F-serratus_M_contig994:67956..72155-

>mRNA_F-serratus_M_contig994.21228.1 ID=mRNA_F-serratus_M_contig994.21228.1|Name=mRNA_F-serratus_M_contig994.21228.1|organism=Fucus serratus male|type=CDS|length=1740bp|location=Sequence derived from alignment at F-serratus_M_contig994:67956..72155- (Fucus serratus male)
ATGGATCTCGATACGCGTAAGGTACCTGAGGTCACCGGGGTAGAGAATCT
GATGCAATTCCCCGAGCAGATCCCTCCTACGTTGGTCAAGTACGATCCTC
CGATCTTTGCCGGTCTCGAGCCTTTCCATGGACCTGATAGTCACAGTGAT
AGTAAGGGTCTCGCCACCGCCACAGATGGAGAAAGAGAACAGATAACAGG
AGCAGGTGGTGGTACTATGGGTGGACGAGACGGCCGAGGACACAAGATAC
CCCGCGCAGACGGGCAGGGGAAAACATCCCAGTTGGATGATATGGTGAAC
TCGATGCTGCCACCTCGAGAATGGACTGAAGAGACGGGGACTTGGATTCA
GTACGTGAGCAAGGACCCAGCTACCCGGCTGGCGGTCATAACGCTACAGA
TGGATCTCGATACGCGTAAGGTACCTGAGGTCACCGGGGTAGAGAATCTG
ATGCAATTCCCCGAGCAGATCCCTCCTACGTTGGTCAAGTACGATCCTCC
GATCTTTGCCGGTCTCGAGCCTTTCCATGGACCTGATAGTCACAGTGATA
GTAAGGGTCTCGCCACCGCCACAGATGGAGAAAGAGAACAGATAACAGGA
GCAGGTGGTGGTACTATGGGTGGACGAGACGGCCGAGGACACAAGATACC
CCGCGCAGACGGGCAGGGGAAAACATCCCAGTTGGATGATATGGTGAACT
CGATGCTGCCACCTCGAGAATGGACTGAAGAGACGGGGACTTGGATTCAG
TACGTGAGCAAGGACCCAGCTACCCGGCTGGCGGTCATAACGCTACAGGA
GAAACTTGATAAGAAGCTTCAAGAGCGGCAGGCCTTGGAAACGGGGATTT
GTCCCGTTCGCGAAGATCTTTATACCCAGGCCTTCGGAGAAACTTGATAA
GAAGCTTCAAGAGCGGCAGGCCTTGGAAACGGGGATTTGTCCCGTTCGCG
AAGATCTTTATACCCAGGCCTTCGACGAGCTCATCCGGCAAGTGACTCTC
GACGGCCCGGAGCGCGGGCTACTGTGTCTGCGCGTGCGCGACGAGATAAG
GATGACAATTGACGCTTACAAGACTCTGTTCGATAGCAGCGTGACCTTCG
GCATCAAGAAACAGCTACAGGCGGAACAAGGAATGACCGAAATGGAAGAA
TCGACGAGCTCATCCGGCAAGTGACTCTCGACGGCCCGGAGCGCGGGCTA
CTGTGTCTGCGCGTGCGCGACGAGATAAGGATGACAATTGACGCTTACAA
GACTCTGTTCGATAGCAGCGTGACCTTCGGCATCAAGAAACAGCTACAGG
CGGAACAAGGAATGACCGAAATGGAAGAATCGATATCTCACTTGGAGGAG
GGCAAGAAGGAGCTCGAACTTCAAGTATCGGAGCTCCGGAACAAGATATC
TCACTTGGAGGAGGGCAAGAAGGAGCTCGAACTTCAAGTATCGGAGCTCC
GGAACAAGATGGAGGTAATGGAAAGGGAGGAGGCCGAACGGCGGGAGATG
GCAAAGCAGAAACGCCAAGAGGAGGTGGACTTCCTCAAGTACCACGGGCA
GCACCTGGAATCTTTCCTCAAGCAATTAGGTCGATGGAGGTAATGGAAAG
GGAGGAGGCCGAACGGCGGGAGATGGCAAAGCAGAAACGCCAAGAGGAGG
TGGACTTCCTCAAGTACCACGGGCAGCACCTGGAATCTTTCCTCAAGCAA
TTAGGTCGACGTGGTGGTAAATAGACGTGGTGGTAAATAG
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