mRNA_F-serratus_M_contig99.21202.1 (mRNA) Fucus serratus male
Overview
Homology
BLAST of mRNA_F-serratus_M_contig99.21202.1 vs. uniprot
Match: UPI0018F80694 (cytochrome b-c1 complex subunit 6-like n=1 Tax=Tripterygium wilfordii TaxID=458696 RepID=UPI0018F80694) HSP 1 Score: 66.6 bits (161), Expect = 2.640e-10 Identity = 35/70 (50.00%), Postives = 42/70 (60.00%), Query Frame = 1 Query: 1 DEEPVDPLTGIREGCSETKP-CASTMSEYKACIDRVEKKGFGT--CEPWFFDYLSCVDKCVAPKIMKVLK 201 DEEPVDP + E C KP C + EY+ACI R+ GT C +FDY SCVDKCVAPK+ +K Sbjct: 3 DEEPVDPKKYLEEAC---KPKCVKPLLEYQACIKRIRGDESGTKHCTGQYFDYWSCVDKCVAPKLFSKVK 69
BLAST of mRNA_F-serratus_M_contig99.21202.1 vs. uniprot
Match: A0A0E0R4L3_ORYRU (UCR_hinge domain-containing protein n=2 Tax=Oryza TaxID=4527 RepID=A0A0E0R4L3_ORYRU) HSP 1 Score: 68.2 bits (165), Expect = 2.870e-10 Identity = 35/70 (50.00%), Postives = 44/70 (62.86%), Query Frame = 1 Query: 1 DEEPVDPLTGIREGCSETKP-CASTMSEYKACIDRVEKKGFGT--CEPWFFDYLSCVDKCVAPKIMKVLK 201 DEEPVDP + E C KP C + EY+ C+ RVEK G C +FDY SC+DKCVAPK+++ LK Sbjct: 53 DEEPVDPKKYLEERC---KPQCVKPLYEYEKCVKRVEKDDTGHKHCTGQYFDYWSCIDKCVAPKLLEKLK 119
BLAST of mRNA_F-serratus_M_contig99.21202.1 vs. uniprot
Match: A0A200PV59_9MAGN (Cytochrome b-c1 complex subunit 6 n=1 Tax=Macleaya cordata TaxID=56857 RepID=A0A200PV59_9MAGN) HSP 1 Score: 66.6 bits (161), Expect = 3.550e-10 Identity = 33/70 (47.14%), Postives = 43/70 (61.43%), Query Frame = 1 Query: 1 DEEPVDPLTGIREGCSETKP-CASTMSEYKACIDRVE--KKGFGTCEPWFFDYLSCVDKCVAPKIMKVLK 201 DEEPVDP + E C KP C + EY+AC+ R++ + G C +FDY SC+DKCVAPK+ LK Sbjct: 14 DEEPVDPKKYLEESC---KPKCVKPLLEYQACVKRIQGDESGHKHCTGQYFDYWSCIDKCVAPKLFAKLK 80
BLAST of mRNA_F-serratus_M_contig99.21202.1 vs. uniprot
Match: UPI0018F83CF9 (cytochrome b-c1 complex subunit 6-like n=2 Tax=rosids TaxID=71275 RepID=UPI0018F83CF9) HSP 1 Score: 65.5 bits (158), Expect = 6.750e-10 Identity = 32/65 (49.23%), Postives = 41/65 (63.08%), Query Frame = 1 Query: 1 DEEPVDPLTGIREGCSETKP-CASTMSEYKACIDRVE--KKGFGTCEPWFFDYLSCVDKCVAPKI 186 DEEPVDP + E C KP C + EYKAC+ R++ + G C +FDY SC+DKCVAPK+ Sbjct: 3 DEEPVDPKKHLEEAC---KPKCVKPLLEYKACVKRIQGDESGNKHCTGQYFDYWSCIDKCVAPKL 64
BLAST of mRNA_F-serratus_M_contig99.21202.1 vs. uniprot
Match: A0A453HMC8_AEGTS (Cytochrome b-c1 complex subunit 6 n=5 Tax=Pooideae TaxID=147368 RepID=A0A453HMC8_AEGTS) HSP 1 Score: 65.5 bits (158), Expect = 9.050e-10 Identity = 35/70 (50.00%), Postives = 42/70 (60.00%), Query Frame = 1 Query: 1 DEEPVDPLTGIREGCSETKP-CASTMSEYKACIDRVEKKGFGT--CEPWFFDYLSCVDKCVAPKIMKVLK 201 DEEPVDP + E C KP C + EY+ CI RVE G C +FDY SC+DKCVAPK+ + LK Sbjct: 14 DEEPVDPKKYLEERC---KPQCVKPLYEYEKCIKRVEADDTGHKHCTGQYFDYWSCIDKCVAPKLFEKLK 80
BLAST of mRNA_F-serratus_M_contig99.21202.1 vs. uniprot
Match: A0A836IUD3_9ROSI (Ubiquinol-cytochrome reductase complex family protein n=1 Tax=Salix suchowensis TaxID=1278906 RepID=A0A836IUD3_9ROSI) HSP 1 Score: 66.2 bits (160), Expect = 1.050e-9 Identity = 34/70 (48.57%), Postives = 43/70 (61.43%), Query Frame = 1 Query: 1 DEEPVDPLTGIREGCSETKP-CASTMSEYKACIDRVE--KKGFGTCEPWFFDYLSCVDKCVAPKIMKVLK 201 DEEPVDP + E C KP C + EY+AC+ R++ + G C +FDY SCVDKCVAPK+ LK Sbjct: 43 DEEPVDPKKYLEETC---KPKCVRPLLEYQACVKRIQDDESGHKHCTGQYFDYWSCVDKCVAPKLFSKLK 109
BLAST of mRNA_F-serratus_M_contig99.21202.1 vs. uniprot
Match: UPI001BF866C2 (Uncharacterized protein n=2 Tax=Carya illinoinensis TaxID=32201 RepID=UPI001BF866C2) HSP 1 Score: 64.7 bits (156), Expect = 1.260e-9 Identity = 33/70 (47.14%), Postives = 44/70 (62.86%), Query Frame = 1 Query: 1 DEEPVDPLTGIREGCSETKP-CASTMSEYKACIDRVE--KKGFGTCEPWFFDYLSCVDKCVAPKIMKVLK 201 DEEPVDP + E C KP C ++ EYKAC R++ + G C +FDY SC+DKCVA K+ ++LK Sbjct: 3 DEEPVDPKKYLEESC---KPKCVKSLLEYKACFKRIQGDETGQKHCTGQYFDYWSCIDKCVALKLFQLLK 69
BLAST of mRNA_F-serratus_M_contig99.21202.1 vs. uniprot
Match: A0A0R3TVB9_RODNA (UCR_hinge domain-containing protein n=1 Tax=Rodentolepis nana TaxID=102285 RepID=A0A0R3TVB9_RODNA) HSP 1 Score: 64.3 bits (155), Expect = 1.630e-9 Identity = 30/66 (45.45%), Postives = 41/66 (62.12%), Query Frame = 1 Query: 4 EEPVDPLTGIREGCSETKPCASTMSEYKACIDRVEKKGFGTCEPWFFDYLSCVDKCVAPKIMKVLK 201 EE VDP+ IR+ C ETK C + +++C R + K +CE F D + C+DKCV PK+ KVLK Sbjct: 3 EEVVDPIHAIRQECRETKECQKFVKLFESCSAR-QPKTKESCEEEFIDLVQCIDKCVGPKLFKVLK 67
BLAST of mRNA_F-serratus_M_contig99.21202.1 vs. uniprot
Match: M8A2K8_TRIUA (Cytochrome b-c1 complex subunit 6 n=7 Tax=Triticeae TaxID=147389 RepID=M8A2K8_TRIUA) HSP 1 Score: 64.7 bits (156), Expect = 1.690e-9 Identity = 33/70 (47.14%), Postives = 42/70 (60.00%), Query Frame = 1 Query: 1 DEEPVDPLTGIREGCSETKP-CASTMSEYKACIDRVEKKGFGT--CEPWFFDYLSCVDKCVAPKIMKVLK 201 D EP+DP + E C KP C ++ +Y+ C+ RVE G C FFDY SCVDKCVAPK+ + LK Sbjct: 14 DNEPIDPKNYLEERC---KPQCVKSLYDYERCVKRVENDETGQKHCTGQFFDYWSCVDKCVAPKLFEKLK 80
BLAST of mRNA_F-serratus_M_contig99.21202.1 vs. uniprot
Match: A0A4U5PTV8_POPAL (Ubiquinol-cytochrome C reductase complex 7.8 kDa family protein n=2 Tax=Populus alba TaxID=43335 RepID=A0A4U5PTV8_POPAL) HSP 1 Score: 67.0 bits (162), Expect = 1.940e-9 Identity = 34/70 (48.57%), Postives = 43/70 (61.43%), Query Frame = 1 Query: 1 DEEPVDPLTGIREGCSETKP-CASTMSEYKACIDRVE--KKGFGTCEPWFFDYLSCVDKCVAPKIMKVLK 201 DEEPVDP + E C KP C + EY+AC+ R++ + G C +FDY SCVDKCVAPK+ LK Sbjct: 94 DEEPVDPKKYLEEAC---KPKCVRPLLEYQACVKRIQGDESGHKHCTGQYFDYWSCVDKCVAPKLFSKLK 160 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig99.21202.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig99.21202.1 >prot_F-serratus_M_contig99.21202.1 ID=prot_F-serratus_M_contig99.21202.1|Name=mRNA_F-serratus_M_contig99.21202.1|organism=Fucus serratus male|type=polypeptide|length=44bp MSEYKACIDRVEKKGFGTCEPWFFDYLSCVDKCVAPKIMKVLK*back to top mRNA from alignment at F-serratus_M_contig99:841221..844657- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig99.21202.1 ID=mRNA_F-serratus_M_contig99.21202.1|Name=mRNA_F-serratus_M_contig99.21202.1|organism=Fucus serratus male|type=mRNA|length=3437bp|location=Sequence derived from alignment at F-serratus_M_contig99:841221..844657- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig99:841221..844657- >mRNA_F-serratus_M_contig99.21202.1 ID=mRNA_F-serratus_M_contig99.21202.1|Name=mRNA_F-serratus_M_contig99.21202.1|organism=Fucus serratus male|type=CDS|length=264bp|location=Sequence derived from alignment at F-serratus_M_contig99:841221..844657- (Fucus serratus male)back to top |