|
Homology
BLAST of mRNA_F-serratus_M_contig989.21163.1 vs. uniprot
Match: A0A7S2E8I0_TRICV (DNA-directed RNA polymerases I, II, and III subunit RPABC3 n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2E8I0_TRICV) HSP 1 Score: 161 bits (407), Expect = 2.430e-45 Identity = 79/141 (56.03%), Postives = 105/141 (74.47%), Query Frame = 1
Query: 10 VLFEDIFEVGKLNPDGKKFDKVNRLECKGLTYDVDILLDINCDIYPVKQGDRLTFVLASTLDLSGKPDDG-TYKPMGDEITLADKYEYVMHGRVFRCEHLKDTKVQLFASFGGLLMRLTGDQRHVANIEVDSRVFCLLRQN 429
LFEDIF V LNPD K FD+VNR+ G T+D D+LLDINC+IY + +GD++T VLASTL+L G PDD +Y P E TLAD YEYVMHGRVF + + + + ASFGGLLMRLTGDQRH+++++ D R++ L++++
Sbjct: 6 TLFEDIFLVKTLNPDRKVFDRVNRIAADGTTFDCDLLLDINCEIYNLTEGDKITLVLASTLNLDGTPDDHFSYAPNPGEPTLADNYEYVMHGRVFDVAYKGEGVIVIAASFGGLLMRLTGDQRHLSSVQPDMRLYVLIKKD 146
BLAST of mRNA_F-serratus_M_contig989.21163.1 vs. uniprot
Match: B8CGC8_THAPS (DNA-directed RNA polymerases I, II, and III subunit RPABC3 n=2 Tax=Thalassiosirales TaxID=33847 RepID=B8CGC8_THAPS) HSP 1 Score: 161 bits (407), Expect = 3.030e-45 Identity = 80/144 (55.56%), Postives = 105/144 (72.92%), Query Frame = 1
Query: 10 VLFEDIFEVGKLNPDGKKFDKVNRLECKGLTYDVDILLDINCDIYPVKQGDRLTFVLASTLDLSGKPDDGT-YKPM---GDEITLADKYEYVMHGRVFRCEHLKDTKVQLFASFGGLLMRLTGDQRHVANIEVDSRVFCLLRQN 429
LFEDIFE+ LNP+GKKFD VNRL G T++ D+LLD NC IY + +G+++T VLASTL+L G PDD T Y P +E+TLAD YEYVMHGRVF + KD V + SFGGLL RLTGDQRH++++ D R++ L++++
Sbjct: 10 TLFEDIFEITHLNPEGKKFDLVNRLSATGTTFECDLLLDYNCQIYSLLEGEKMTLVLASTLNLDGTPDDHTSYNPATSHNNELTLADNYEYVMHGRVFDVSYKKDGVVVIAISFGGLLCRLTGDQRHLSSVLPDMRLYVLIKKD 153
BLAST of mRNA_F-serratus_M_contig989.21163.1 vs. uniprot
Match: A0A7S2W3V0_9STRA (DNA-directed RNA polymerases I, II, and III subunit RPABC3 n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2W3V0_9STRA) HSP 1 Score: 160 bits (406), Expect = 3.770e-45 Identity = 80/141 (56.74%), Postives = 107/141 (75.89%), Query Frame = 1
Query: 13 LFEDIFEVGKLNPDGKKFDKVNRLECKGLTYDVDILLDINCDIYPVK-QGDRLTFVLASTLDLSGKPDDG-TYKPMGDEITLADKYEYVMHGRVFRCEHLKDTKVQLFASFGGLLMRLTGDQRHVANIEVDSRVFCLLRQN 429
LFEDIFE+ +N DGKKFD+VNR+ G T++ ++LLDINC+IY +K +G++ T VLASTL+L G+PDD +Y P E TLAD YEYVMHGRVF + K+ V + ASFGGLLMRL G QRH++NI+ D R++ LL+++
Sbjct: 9 LFEDIFEITAINSDGKKFDRVNRIAATGTTFECELLLDINCEIYHLKDEGEKFTLVLASTLNLDGRPDDHLSYAPNPGEPTLADNYEYVMHGRVFDISYKKEGAVVIAASFGGLLMRLIGHQRHLSNIQPDMRLYVLLKKD 149
BLAST of mRNA_F-serratus_M_contig989.21163.1 vs. uniprot
Match: A0A024TMY4_9STRA (DNA-directed RNA polymerases I, II, and III subunit RPABC3 n=9 Tax=Saprolegniaceae TaxID=4764 RepID=A0A024TMY4_9STRA) HSP 1 Score: 159 bits (403), Expect = 8.760e-45 Identity = 73/138 (52.90%), Postives = 106/138 (76.81%), Query Frame = 1
Query: 13 LFEDIFEVGKLNPDGKKFDKVNRLECKGLTYDVDILLDINCDIYPVKQGDRLTFVLASTLDLSGKPDDGTYKPMGDEITLADKYEYVMHGRVFRCEHLKDTKVQLFASFGGLLMRLTGDQRHVANIEVDSRVFCLLRQ 426
+FEDIFE+ +LNP+GKKF++V RL CKG++Y+++++LDIN +++P+K ++ TF L STLDL GKPDDG + G + TL D+Y+Y M+G+VF+ +H V ++ASFGGLLM L GDQ H+ NI SRV+CL+R+
Sbjct: 6 MFEDIFEIKQLNPEGKKFERVTRLMCKGVSYELELMLDINSEVFPMKVHEQFTFALVSTLDLEGKPDDGIFDQTG-KPTLLDRYDYGMYGKVFQYDHEGGNMVAIYASFGGLLMCLRGDQAHLRNIHNGSRVYCLMRR 142
BLAST of mRNA_F-serratus_M_contig989.21163.1 vs. uniprot
Match: A0A7S0CGW6_9STRA (DNA-directed RNA polymerases I, II, and III subunit RPABC3 n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CGW6_9STRA) HSP 1 Score: 159 bits (402), Expect = 1.540e-44 Identity = 78/142 (54.93%), Postives = 103/142 (72.54%), Query Frame = 1
Query: 4 SGVLFEDIFEVGKLNPDGKKFDKVNRLECKGLTYDVDILLDINCDIYPVKQGDRLTFVLASTLDLSGKPDDGTYKPMGDEITLADKYEYVMHGRVFRCEHLKDTKVQLFASFGGLLMRLTGDQRHVANIEVDSRVFCLLRQN 429
S LFEDIFEV LNP+ K F++VNRL G T++ D+LLDINC+IY +++ DR+T VLA TL+L G PDD E +LAD YEYVMHGRVF + KD + + ASFGGLLMRLTGDQRH++ I+ D R++ L++++
Sbjct: 9 SMTLFEDIFEVTALNPEKKIFERVNRLAATGTTFECDLLLDINCEIYSIQESDRITVVLAGTLNLDGTPDDHFSYTGQSEPSLADNYEYVMHGRVFEILYQKDGMISIHASFGGLLMRLTGDQRHLSAIQPDMRLYILIKKD 150
BLAST of mRNA_F-serratus_M_contig989.21163.1 vs. uniprot
Match: F0W6P2_9STRA (DNAdirected RNA polymerase I putative n=3 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W6P2_9STRA) HSP 1 Score: 160 bits (405), Expect = 5.320e-44 Identity = 76/142 (53.52%), Postives = 105/142 (73.94%), Query Frame = 1
Query: 1 MSGVLFEDIFEVGKLNPDGKKFDKVNRLECKGLTYDVDILLDINCDIYPVKQGDRLTFVLASTLDLSGKPDDGTYKPMGDEITLADKYEYVMHGRVFRCEHLKDTKVQLFASFGGLLMRLTGDQRHVANIEVDSRVFCLLRQ 426
M+ LFEDIFEV +LNP+GK FDKV R+ KG++Y++++ LDIN +++ +K+ D+ TF L TLDL GKPDDG Y G + TL D+Y+Y M+G++F EH V ++ASFGGLLMRL G+QRH+ + DSRV+CLLR+
Sbjct: 84 MATELFEDIFEVRELNPEGKNFDKVTRVVGKGVSYELELTLDINSEVWRLKKNDKFTFALVCTLDLEGKPDDGIYNQSG-KATLLDRYDYGMYGKIFHYEHEGGNNVAIYASFGGLLMRLRGEQRHLHLVHNDSRVYCLLRK 224
BLAST of mRNA_F-serratus_M_contig989.21163.1 vs. uniprot
Match: A0A1Z5K7U1_FISSO (DNA-directed RNA polymerases I, II, and III subunit RPABC3 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K7U1_FISSO) HSP 1 Score: 155 bits (392), Expect = 4.610e-43 Identity = 77/141 (54.61%), Postives = 99/141 (70.21%), Query Frame = 1
Query: 10 VLFEDIFEVGKLNPDGKKFDKVNRLECKGLTYDVDILLDINCDIYPVKQGDRLTFVLASTLDLSGKP-DDGTYKPMGDEITLADKYEYVMHGRVFRCEHLKDTKVQLFASFGGLLMRLTGDQRHVANIEVDSRVFCLLRQN 429
LFEDIFEV LNPDG KFD+VNR++ G T++ ++LLDINC+IY + +G++ T VLASTL L G P D Y P E L+D YEYVMHGRVF KD V + S+GGLLMRL GD RH+ +I+ D R+F LL+++
Sbjct: 9 TLFEDIFEVNALNPDGYKFDRVNRIQAIGTTFECELLLDINCEIYSLLEGEKFTAVLASTLHLDGSPADHSCYMPNTTEPDLSDNYEYVMHGRVFDMAFKKDGTVSISISYGGLLMRLVGDARHLTSIQPDQRLFLLLKKD 149
BLAST of mRNA_F-serratus_M_contig989.21163.1 vs. uniprot
Match: B7G7Y8_PHATC (DNA-directed RNA polymerases I, II, and III subunit RPABC3 n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G7Y8_PHATC) HSP 1 Score: 154 bits (390), Expect = 9.150e-43 Identity = 77/142 (54.23%), Postives = 104/142 (73.24%), Query Frame = 1
Query: 10 VLFEDIFEVGKLNPDGKKFDKVNRLECKGLTYDVDILLDINCDIYPVKQGDRLTFVLASTLDLSGKPDDG-TYKPMGD-EITLADKYEYVMHGRVFRCEHLKDTKVQLFASFGGLLMRLTGDQRHVANIEVDSRVFCLLRQN 429
LFEDIFE+ LNPDG KF++VNR++ G T++ ++LLDINC+IY +++ D+ T VLASTL L G P D +Y P E +LAD YEYVMHGRVF + KD V + S+GGLLMRLTGDQRH+++I D R++ LL+++
Sbjct: 8 TLFEDIFEITALNPDGYKFERVNRIQATGTTFECELLLDINCEIYTLRETDKFTLVLASTLHLDGSPADHFSYVPANSAEPSLADNYEYVMHGRVFDMSYQKDGTVVIAISYGGLLMRLTGDQRHLSSILPDQRLYLLLKKD 149
BLAST of mRNA_F-serratus_M_contig989.21163.1 vs. uniprot
Match: A0A7S1CMR6_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CMR6_9STRA) HSP 1 Score: 154 bits (390), Expect = 1.370e-42 Identity = 71/141 (50.35%), Postives = 104/141 (73.76%), Query Frame = 1
Query: 4 SGVLFEDIFEVGKLNPDGKKFDKVNRLECKGLTYDVDILLDINCDIYPVKQGDRLTFVLASTLDLSGKPDDGTYKPMGDEITLADKYEYVMHGRVFRCEHLKDTKVQLFASFGGLLMRLTGDQRHVANIEVDSRVFCLLRQ 426
S LF DIF V +NPDGKKFD+V+RL CKG T+DV + +D+ +++PVK G++L + STL L G+PDDGTY+ E +L D+Y+Y MHGRVF+ ++ +D +V ++ASFGGLLM L G Q ++++ +D RV+CL+R+
Sbjct: 5 SATLFHDIFTVDDVNPDGKKFDRVSRLVCKGETWDVLLKIDVASEVFPVKAGEKLAVAVVSTLRLDGEPDDGTYQHNEGEESLLDQYDYGMHGRVFKYDYEEDDRVSVYASFGGLLMLLHGQQDSLSSLSLDQRVYCLIRR 145
BLAST of mRNA_F-serratus_M_contig989.21163.1 vs. uniprot
Match: A0A7S2YA89_9STRA (DNA-directed RNA polymerases I, II, and III subunit RPABC3 n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YA89_9STRA) HSP 1 Score: 154 bits (388), Expect = 1.930e-42 Identity = 80/144 (55.56%), Postives = 100/144 (69.44%), Query Frame = 1
Query: 10 VLFEDIFEVGKLNPDGKKFDKVNRLECKGLTYDVDILLDINCDIYPVKQGDRLTFVLASTLDLSGKPDDG----TYKPMGDEITLADKYEYVMHGRVFRCEHLKDTKVQLFASFGGLLMRLTGDQRHVANIEVDSRVFCLLRQN 429
LFEDIFE+ LNPDG KFD+VNRL+ G T++ D+LLDIN +IY + + DR T VLASTL L G P D T G E TLAD YEYVMHGRVF ++ KD V L S+GGLLMRLTGD++H+ I D R++ LL+++
Sbjct: 8 TLFEDIFEITALNPDGFKFDRVNRLQATGTTFECDLLLDINSEIYHLMENDRFTLVLASTLHLDGSPADHLSYVTTAHTGSEPTLADNYEYVMHGRVFDIKYQKDGTVVLAFSYGGLLMRLTGDKKHLNAIRPDQRLYLLLKKD 151
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig989.21163.1 vs. uniprot
Analysis Date: 2022-09-19 ( Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match Name | E-value | Identity | Description | |
A0A7S2E8I0_TRICV | 2.430e-45 | 56.03 | DNA-directed RNA polymerases I, II, and III subuni... | [more] |
B8CGC8_THAPS | 3.030e-45 | 55.56 | DNA-directed RNA polymerases I, II, and III subuni... | [more] |
A0A7S2W3V0_9STRA | 3.770e-45 | 56.74 | DNA-directed RNA polymerases I, II, and III subuni... | [more] |
A0A024TMY4_9STRA | 8.760e-45 | 52.90 | DNA-directed RNA polymerases I, II, and III subuni... | [more] |
A0A7S0CGW6_9STRA | 1.540e-44 | 54.93 | DNA-directed RNA polymerases I, II, and III subuni... | [more] |
F0W6P2_9STRA | 5.320e-44 | 53.52 | DNAdirected RNA polymerase I putative n=3 Tax=Albu... | [more] |
A0A1Z5K7U1_FISSO | 4.610e-43 | 54.61 | DNA-directed RNA polymerases I, II, and III subuni... | [more] |
B7G7Y8_PHATC | 9.150e-43 | 54.23 | DNA-directed RNA polymerases I, II, and III subuni... | [more] |
A0A7S1CMR6_9STRA | 1.370e-42 | 50.35 | Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... | [more] |
A0A7S2YA89_9STRA | 1.930e-42 | 55.56 | DNA-directed RNA polymerases I, II, and III subuni... | [more] |
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Taxonomic scope | Eukaryota |
Seed ortholog score | 273.1 |
Seed ortholog evalue | 7.5e-71 |
Seed eggNOG ortholog | 2880.D8LM46 |
Preferred name | RPB8 |
KEGG rclass | RC02795 |
KEGG ko | ko:K03016 |
KEGG Reaction | R00435,R00441,R00442,R00443 |
KEGG Pathway | ko00230,ko00240,ko01100,ko03020,ko04623,ko05016,ko05169,map00230,map00240,map01100,map03020,map04623,map05016,map05169 |
KEGG Module | M00180,M00181,M00182 |
Hectar predicted targeting category | other localisation |
GOs | GO:0000375,GO:0000377,GO:0000398,GO:0000418,GO:0000419,GO:0000428,GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0003824,GO:0003899,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005665,GO:0005666,GO:0005730,GO:0005736,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006281,GO:0006283,GO:0006289,GO:0006351,GO:0006352,GO:0006353,GO:0006354,GO:0006360,GO:0006361,GO:0006363,GO:0006366,GO:0006367,GO:0006368,GO:0006370,GO:0006383,GO:0006396,GO:0006397,GO:0006399,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0007154,GO:0007165,GO:0007166,GO:0007167,GO:0007169,GO:0008150,GO:0008152,GO:0008380,GO:0008543,GO:0009058,GO:0009059,GO:0009301,GO:0009304,GO:0009452,GO:0009719,GO:0009893,GO:0009987,GO:0010033,GO:0010467,GO:0010468,GO:0010604,GO:0010628,GO:0016070,GO:0016071,GO:0016073,GO:0016591,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019222,GO:0019438,GO:0023052,GO:0030880,GO:0031974,GO:0031981,GO:0032774,GO:0032991,GO:0032993,GO:0033554,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0034660,GO:0036260,GO:0040029,GO:0042221,GO:0042795,GO:0042797,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044344,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044452,GO:0044464,GO:0045815,GO:0046483,GO:0048518,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0055029,GO:0060147,GO:0060255,GO:0060964,GO:0060966,GO:0060968,GO:0061695,GO:0065007,GO:0070013,GO:0070848,GO:0070887,GO:0071310,GO:0071363,GO:0071495,GO:0071704,GO:0071774,GO:0090304,GO:0097159,GO:0097659,GO:0097747,GO:0098781,GO:0140098,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1902494,GO:1990234 |
EggNOG free text desc. | transcription by RNA polymerase I |
EggNOG OGs | KOG3400@1,KOG3400@2759 |
Ec32 ortholog description | Nucleic acid-binding, OB-fold |
Ec32 ortholog | Ec-06_002430.1 |
COG Functional cat. | K |
Best tax level | Eukaryota |
Best eggNOG OG | NA|NA|NA |
BRITE | br01611,ko00000,ko00001,ko00002,ko03021,ko03400 |
Exons | 5 |
Model size | 1061 |
Cds size | 435 |
Stop | 1 |
Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622932776.9759693-CDS-F-serratus_M_contig989:95922..95995 | 1622932776.9759693-CDS-F-serratus_M_contig989:95922..95995 | Fucus serratus male | CDS | F-serratus_M_contig989 95923..95995 + |
1690964469.6765735-CDS-F-serratus_M_contig989:95922..95995 | 1690964469.6765735-CDS-F-serratus_M_contig989:95922..95995 | Fucus serratus male | CDS | F-serratus_M_contig989 95923..95995 + |
1622932777.036747-CDS-F-serratus_M_contig989:99085..99136 | 1622932777.036747-CDS-F-serratus_M_contig989:99085..99136 | Fucus serratus male | CDS | F-serratus_M_contig989 99086..99136 + |
1690964469.6910884-CDS-F-serratus_M_contig989:99085..99136 | 1690964469.6910884-CDS-F-serratus_M_contig989:99085..99136 | Fucus serratus male | CDS | F-serratus_M_contig989 99086..99136 + |
1622932777.051157-CDS-F-serratus_M_contig989:99508..99627 | 1622932777.051157-CDS-F-serratus_M_contig989:99508..99627 | Fucus serratus male | CDS | F-serratus_M_contig989 99509..99627 + |
1690964469.710775-CDS-F-serratus_M_contig989:99508..99627 | 1690964469.710775-CDS-F-serratus_M_contig989:99508..99627 | Fucus serratus male | CDS | F-serratus_M_contig989 99509..99627 + |
1622932777.0698614-CDS-F-serratus_M_contig989:99975..100056 | 1622932777.0698614-CDS-F-serratus_M_contig989:99975..100056 | Fucus serratus male | CDS | F-serratus_M_contig989 99976..100056 + |
1690964469.7217817-CDS-F-serratus_M_contig989:99975..100056 | 1690964469.7217817-CDS-F-serratus_M_contig989:99975..100056 | Fucus serratus male | CDS | F-serratus_M_contig989 99976..100056 + |
1622932777.087366-CDS-F-serratus_M_contig989:100454..100565 | 1622932777.087366-CDS-F-serratus_M_contig989:100454..100565 | Fucus serratus male | CDS | F-serratus_M_contig989 100455..100565 + |
1690964469.7316773-CDS-F-serratus_M_contig989:100454..100565 | 1690964469.7316773-CDS-F-serratus_M_contig989:100454..100565 | Fucus serratus male | CDS | F-serratus_M_contig989 100455..100565 + |
The following UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622932777.103342-UTR-F-serratus_M_contig989:100565..101191 | 1622932777.103342-UTR-F-serratus_M_contig989:100565..101191 | Fucus serratus male | UTR | F-serratus_M_contig989 100566..101191 + |
1690964469.7415264-UTR-F-serratus_M_contig989:100565..101191 | 1690964469.7415264-UTR-F-serratus_M_contig989:100565..101191 | Fucus serratus male | UTR | F-serratus_M_contig989 100566..101191 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig989.21163.1 >prot_F-serratus_M_contig989.21163.1 ID=prot_F-serratus_M_contig989.21163.1|Name=mRNA_F-serratus_M_contig989.21163.1|organism=Fucus serratus male|type=polypeptide|length=145bp
MSGVLFEDIFEVGKLNPDGKKFDKVNRLECKGLTYDVDILLDINCDIYPV KQGDRLTFVLASTLDLSGKPDDGTYKPMGDEITLADKYEYVMHGRVFRCE HLKDTKVQLFASFGGLLMRLTGDQRHVANIEVDSRVFCLLRQNA* back to topmRNA from alignment at F-serratus_M_contig989:95923..101191+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_F-serratus_M_contig989.21163.1 ID=mRNA_F-serratus_M_contig989.21163.1|Name=mRNA_F-serratus_M_contig989.21163.1|organism=Fucus serratus male|type=mRNA|length=5269bp|location=Sequence derived from alignment at F-serratus_M_contig989:95923..101191+ (Fucus serratus male) ATGTCTGGGGTTCTTTTCGAGGATATTTTTGAAGTGGGGAAACTCAATCC
AGACGGGAAAAAGTTCGACAAAGGTGAGCGGGGAGCGTCACCAAAAATTG
CGCCGTCTAGTGGGTGTGGAATAAGAGAGGCGCCCATTGATTGGTTCATG
GTGAAACCTGAAAAGTCCTCACCCATTATTGGAACTGTCTTGAGGACTAC
TGGCCTTGTGCCGGCGGACTCTCGTCAGTGAACACCATCGATAAGCATTG
CGTGACGTGATGTGGTTGCCCAGGAAGGTTTAGATGCGTCCAGATTATTC
TTAAACTCTAATACAGTAGGGACTGACCACCCGATGGCGGTAGATGGTAT
ATGGTATATGGTATATGTAAACGCCGTTGCGGAAAGCGGGAGTAATCCCA
TGAATAAGCACTAGATTCAGCCTGAGTGTGGAGAATGAGCGGGTTGAAAC
GAGACGGAACGGCCGAACCTCTTTGATTTCGCGAGACCAAATTATAAGGC
GTGAACGGGGACATGGAAGATATCATTTTTCCTGATCAGTTGACCACGAG
CTGGATTAAAAACCTTGCACGGTTGATCCATAGAAAGAGTGGACCAACGG
CGTACAGAGCGAAGTCCGGGCGTTTGACATAACGGACTGGAAAGCGATGA
CGTTAAAGGCTGAGGTGTGGGTTGAGGCGGTCACGGAGGGGGGACGGAGG
TTCACGGCCGCGTGGAGAAAAAAAGACGCGGACAGACGGCGCCAGGAGAA
GAGAGAGACAACGAGATTGGGAAAGTTGTTATCGCATACGGAAGCGTAGA
ATTTTGCGAAGCGACACCCATTGGCCTAGCTGACGAGTCCAAGTAATCTT
TGTACGGACGCGAGTCGGACCAAGACCTACGCAACGCCGACCTGCGTAGC
ACCTAGACATGTAGATGCCTCGCGTAACTTTTATTTTTTATCCGAACGAG
CAGCGTGGGGGGGGGGGGGGGGCGATGCCAGATTTTTATTTTATCTCATT
TTTTTCCCTGTTCACCAGACCACGAGCGGGATTGGCCACCGTGTAAAGTA
GATTTTTCGGGTTGCAACCAATACGCTGAATGTGTGAAACAATAACAACA
ACTCTGCTGAAAGTGCTGACCATAAACACATACGTACAGTATTACTGTAA
TGTAGCCTGTACAAGCAGCCTGTACCATTCGACACAAGGTAACCTCCGCA
ATCATACTCGTAGGTTAGATTATTGAAACTACATTACAGCAGACCTTTAG
TTTACATTTATAATTCCCGATCGTAGAAACAACTGCCTCCGCTTTGTGGA
CTGGAGTCGTGGCGATCTAAGCGTTACGCACCGAAAGCGACTCATACCAG
GCGTGTCCAGCGGTAACGGTTGCGGGTTCATCGGCTTTGGTCCTTTGTTC
TAGCTCCTTTCTCAACCTCCGCCCAGTCCACGCGCCCGGATCAAACCGAT
TTGGATGCCTCCATGGCGTTCATCGTCAAGCACAAAATCAGCGCTCCCTT
CCTTGTCAACGCCCCCTACCGGCGTATCCGTGAGGCTTGCGCGGCGTGGA
CGCCCTCTCCTGCCTTTGTAAAATTTTGATGGCTTTTCTATCGATTATCA
AAGTTGTGTTTCGGGGCACGCGAGAACGTCCCGAGCCAGGGCGTACAAGC
GTTTTAACAGGCCTTCGCCCCAGGGGCGCTTAGTAGGGATTCGGAAGCTG
AAACTGGGCTCATTTCAGTTTCGAAATGGGCCCCATTTCATTTATTTATT
TATTTATTTTTTCCGAACCATCTCTCAAGGGAGGGAATCAACTCAGATTA
TTTTCCTGCAGCCACCAATCCCCATAAATGTTcCGGCAGTTTGGCCAGCT
GTCGGAATTTAGGTACGGTCATTCACGACTGTCGTCACTGAAACCCTGCC
TTACTGTACACGATGCCAAAGCGCGCACTCGTACGAGAGCTTGACGCTCA
AGAAGCTATTAATACTAATCTTGACGAAGCCCCGCCTATAGAACTGGAAG
CTTCCTCGGACAACCTCCAGAGCTACAAATAATATTTTCGTACGTAAAGA
AGTATAGTTAAACGGCACGGGCCGAAAAATCCAGGCCTCATACAATTATA
CAACCGGCTTGGGCACAAGGTCCCACGGCCACGTCCTCAATATGGTAACG
TCTTCCTATTTGCTCCTAGCCGTGGTCGCCGGTAGGCCTCTGGGCCTAGC
CTCGTTTGGCCGTTATAGCTCTTGAGACTTTGTCTTTTGAGACTTACATA
TTCGCCGATTCATTGTTGCATTTTCGTCTCGCGGGAAATTCGCCCCCCAC
CGTTGCATGAAAACCTCAAATTTCGTATGTTCGGTGATAAAATAGACAGA
TGGGTTCATTCGACTGGCGGGAACTTGAACCGGAGAGCATCGAACCAATC
TATTTTGCCATCAGCCACCACAGTAAATGGCCTCAAACGCATAACACACA
CGCGACATGACCTTCGAACCATTTTCGCAGCTCTTGCCGTGAAAGTCGAC
TTTTCACACACCAGAGGTTCAACGATCGAACTCGCCGTAAGTAGAAAGTG
TGGAGATCATCTGAATTGTTCAGGAGGTTAACACTGGCCATGTCCGATAC
GAATATCAGCAAAAAGTTTAGATTTGTAACTCGATCCACCTGACTCAAAA
CAGCATCACCTTAGAGTGTGATTGATGCTCGATTCTCCCAGAAAGAAAAG
GATAGTACCGCGTTGGGCTTCGCACGTAGCGGACCTTAGGGCTCAAGTCT
GCCAAGACATCTACTCTCGAACGTCGAGAAAAGTGAACGCGGTTTTCTTT
TTGTGCGATACGGACGAGCACTTTGCTTGCTTCGGCGGCAATGCACAACA
AAACGACAACCAAAAAATAAGTCTTCTCTCTATCGGCAGATGTCACCCAT
CCCGCAAACTGCTGCAGACAATCGGAGCCGATCTCATCCCGTCTAGCCCT
CACAACGATCACGAACATTCCCAGCTATTCCGCAGCGATCAGTTCGCGAG
CGTTGGTGGCAGCAGTGGAGGAGCGTTGAATCCAGCCTCTAATAGAAGGT
TTCGGCGGGGGATTGCGCCATGATCCGACACGTATCTCGGCGATCTGACT
CAGCTTCACCGTTCCACCTACACCCTATTTTTGTTGATGCCCGCCGTGTG
TCCTTCCTGTCAGTCAACCGGCTGGAGTGCAAGGGGCTAACGTACGATGT
GGATATCCTTCTCGGTGAGTGAGGCATGCTTCGCGTAGACTTGTCTCCTG
AGGATGCCAAGATTGTCGTGGGAAAATCGATTTACTGAATCAGCGTTCTT
CTCGTATTTCAGTAGCTACAGCGTCCTCAGTCCTCAGTCCTTGCTTACAT
CACCGCTATTAATGCTGTCTTTTGGCCGAGACACGTGGATTCGCGAGCCT
CCAACGTTGACGCCTGGGCAGACAGGTTCGGATGATCGTCGTCTCCTTAT
AAAGGAATCATATACGGTCGAGGAGGAAACGAGCGTTGAGAACAAGGGGC
TGAAAAACGTCACACACGCATAATACACGCAAATTATGAGAAGAGACCGA
TTTGCGTGCGCCGTGTTGCATTGATCTCTGCCGAAGATATCAACTGCGAT
ATCTACCCAGTGAAGCAAGGGGACCGGTTGACATTCGTGCTCGCTAGTAC
CCTCGACCTCAGTGGCAAGCCAGACGACGGCACGTACAAGCCGATGGGCG
ACGAGGTGATGAGTATCCGCACCAATTCGCGACATTGCCGAACGACCGCG
CCTTTAACATATTATATTTTTTTTCCCGCCCGATTGTTTTGGACTGGACA
AAGTTCGGGAGCCGCCTTCAAGCCGAATAGCTGATACTTTCCCCCTTGGC
CTTTTCAAAGCTGTAGAAGTGCGAAGACAACTGTCCAGTTGTTGCCCTTG
GAAGGCAAAACAAGACGCTGAAATCGCTGACCAACGAGGAGAGTACTGCC
CATGCGACGCGCGTGTGTGCTTGTTCGAGCCTAGAAACACGCAATCTCAG
GGGCAGATGTTCGCGTTCGCTGATCTCGTCCTTCTGGTCTTTTGGTGAAA
CAGATCACACTCGCGGACAAGTACGAGTACGTCATGCACGGTCGCGTGTT
CCGATGCGAGCATTTGAAGGACACTAAAGTACAAGTGAGGATTCTCTGTT
CGGAAATCTTTCTCGGCTCTTGTCGTGACGCGAAGCACACGCTCGCGGAG
TCTGCTACCAATTCTGAACGCTTAGGCCGCCGGTGCACCCCAGTCACCAG
TGATCACTGTCATGTTGATAGAACGCCTTCCCCACCTCGCACCCGTTGGT
CTAGCAAATCGTGGGGCGGGCATCACTTGCGCATCGCTCTAATAATATTA
ATATTAATACAACATAGCGTACACCCCGAGGTCATGATTCCTTTGTCGAC
ACATTTGGCGTACTGTTTCCGTCCGTCTCGCCCTTGATCTCCTGTCCTCT
TTCCACCCTCTTTCTTCTTTCCTTTGTGTGTTGGTGCTGTATCTTTCTAT
CCATCTATCTGGCAACGGTTCATGCGGGAAAGTTATTCGCGTCGTTTGGA
GGACTGCTGATGCGCCTGACCGGCGACCAGCGACACGTGGCCAATATTGA
GGTCGACTCTCGAGTGTTTTGTCTCCTCCGGCAGAACGCGTGAGCGCGTG
TTTCGTCTTGCAGAAGGGGAGCGGCAACACGCTCGAAGAGTAAACGTTAC
ACGAGTCTGACGGACCGAGTTCCTTCCCTCGTGTGCTTGTGGGCTTTCGA
GCGCCTCCACTTTACTTGTCAGTACTGCTGCAGGCCAGGCGACGATTGCA
TCGTGACGCGAAATCAAACGAAGGAGGTCTGTTGAAGAGAGATGGTGCGC
GCGAAACTCAATTGATGGCTCTGTTGAAAATTTGGAAAATGAGGCGAGCG
GCGAGTCGGATCACGGTACCTTTGAAGACAGCAGTAGATATAGAAGTACG
GCATGAATGATACCGCGTTCAGTGTGATACGGTGCGGCGGTACAGACTTC
GTGAGGCGGACGACTCCCGATATGCCCTGTTTCATTACTACGGCAGCGCA
ACGCTTTGGCCGAGAAAAACGGATGACCACGGACCCAGTTGGTTGTACAT
AACTTCGTAAATCCCTTTGCAGGCGCCGCTCTCGCCGGTCTTGGCACTTA
TTTCCCTCCCGAACACTTGTTTCTACGACACTACGATACTGTAACACTAG
TTTATCAGAGCATGGTGATGCTGGTATTGGTGAGCACTCGGTGGCGCGAA
CAAAAGATGGGCGCACCTG back to topCoding sequence (CDS) from alignment at F-serratus_M_contig989:95923..101191+ >mRNA_F-serratus_M_contig989.21163.1 ID=mRNA_F-serratus_M_contig989.21163.1|Name=mRNA_F-serratus_M_contig989.21163.1|organism=Fucus serratus male|type=CDS|length=870bp|location=Sequence derived from alignment at F-serratus_M_contig989:95923..101191+ (Fucus serratus male) ATGTCTGGGGTTCTTTTCGAGGATATTTTTGAAGTGGGGAAACTCAATCC AGACGGGAAAAAGTTCGACAAAGATGTCTGGGGTTCTTTTCGAGGATATT TTTGAAGTGGGGAAACTCAATCCAGACGGGAAAAAGTTCGACAAAGTCAA CCGGCTGGAGTGCAAGGGGCTAACGTACGATGTGGATATCCTTCTCGTCA ACCGGCTGGAGTGCAAGGGGCTAACGTACGATGTGGATATCCTTCTCGAT ATCAACTGCGATATCTACCCAGTGAAGCAAGGGGACCGGTTGACATTCGT GCTCGCTAGTACCCTCGACCTCAGTGGCAAGCCAGACGACGGCACGTACA AGCCGATGGGCGACGAGATATCAACTGCGATATCTACCCAGTGAAGCAAG GGGACCGGTTGACATTCGTGCTCGCTAGTACCCTCGACCTCAGTGGCAAG CCAGACGACGGCACGTACAAGCCGATGGGCGACGAGATCACACTCGCGGA CAAGTACGAGTACGTCATGCACGGTCGCGTGTTCCGATGCGAGCATTTGA AGGACACTAAAGTACAAATCACACTCGCGGACAAGTACGAGTACGTCATG CACGGTCGCGTGTTCCGATGCGAGCATTTGAAGGACACTAAAGTACAATT ATTCGCGTCGTTTGGAGGACTGCTGATGCGCCTGACCGGCGACCAGCGAC ACGTGGCCAATATTGAGGTCGACTCTCGAGTGTTTTGTCTCCTCCGGCAG AACGCGTGATTATTCGCGTCGTTTGGAGGACTGCTGATGCGCCTGACCGG CGACCAGCGACACGTGGCCAATATTGAGGTCGACTCTCGAGTGTTTTGTC TCCTCCGGCAGAACGCGTGA back to top
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