mRNA_F-serratus_M_contig972.21055.1 (mRNA) Fucus serratus male
Overview
Homology
BLAST of mRNA_F-serratus_M_contig972.21055.1 vs. uniprot
Match: A0A6H5JN00_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN00_9PHAE) HSP 1 Score: 249 bits (637), Expect = 1.620e-69 Identity = 150/450 (33.33%), Postives = 232/450 (51.56%), Query Frame = 1 Query: 61 KIGQDGKVQKYKCRLVAQGFWQVEGVHHTEKYSPTSAAASIWTLLAMTAAKDGELRHFDAEHVFLKADIDEEIYIEIPEEF*EFPGAVGRLNKAICGFVKAGRCWNNKFCEDMTSIGL*QAKADPCVFRKVVDGEAEMVLAVYVDDILAHAKDQATMDRFATGLGQKVKLKDMGDAGYYMGCHITRNRKARELKLDQHFYMEPIAKRFDVKKATNIPAAAGVPTLSKAVEPRNPEEKEEMRKFPYRETVGALMWTATMTWPDIACAVRA-----------------------------------GCGLCMEVYTDLDFRACLDMRRTVSGAVLILAKGAISWDSRMQEVTASGTPTAEYATLSEVVNEVLFLRQVQEFMEP*RRVGAVDFFEDN*GAINLATNKHAINSLRTKHIDVKHHLVRDASDARKVRVAYVRSEDQHADLLTKPL 1305 K ++GK+ +K RLVA+GF Q+ V + SP ++ASI +LA+ K L H+D + + A +DEE+++++P + + + +AI G ++GR W + + G Q KADPCVFRK+VD M++ +YVDDIL D+ + A+ L +K K++G+ ++ GC I R+ +A L++ Q Y++ + +RFDVK + IPA G K E EE ++P RE +G++MW +T + PD++ AVRA G GL + VY D + D RR+VSG + +S S+ Q + + + AEY E V E LF+R V F+ P ++ EDN GAI L N ++S RTKHIDV++H +R + + V +V + +QHADLLTK L Sbjct: 1190 KTNKEGKIDTFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDQVVVMIIVIYVDDILVAGSDEDCEELLAS-LNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPK-------REDEEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQRGSGLGLAVYVDASYADTED-RRSVSGLATTVGGTVVSHGSKTQSIVSLSSTEAEYIAAGEGVKEALFVRAVLSFVAPETSGSSIKVLEDNQGAIALVQNP--LSSGRTKHIDVRYHFIRGLFRSGDISVKFVPTTEQHADLLTKAL 1628
BLAST of mRNA_F-serratus_M_contig972.21055.1 vs. uniprot
Match: A0A6H5KF60_9PHAE (Uncharacterized protein n=12 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF60_9PHAE) HSP 1 Score: 249 bits (637), Expect = 1.650e-69 Identity = 150/450 (33.33%), Postives = 232/450 (51.56%), Query Frame = 1 Query: 61 KIGQDGKVQKYKCRLVAQGFWQVEGVHHTEKYSPTSAAASIWTLLAMTAAKDGELRHFDAEHVFLKADIDEEIYIEIPEEF*EFPGAVGRLNKAICGFVKAGRCWNNKFCEDMTSIGL*QAKADPCVFRKVVDGEAEMVLAVYVDDILAHAKDQATMDRFATGLGQKVKLKDMGDAGYYMGCHITRNRKARELKLDQHFYMEPIAKRFDVKKATNIPAAAGVPTLSKAVEPRNPEEKEEMRKFPYRETVGALMWTATMTWPDIACAVRA-----------------------------------GCGLCMEVYTDLDFRACLDMRRTVSGAVLILAKGAISWDSRMQEVTASGTPTAEYATLSEVVNEVLFLRQVQEFMEP*RRVGAVDFFEDN*GAINLATNKHAINSLRTKHIDVKHHLVRDASDARKVRVAYVRSEDQHADLLTKPL 1305 K ++GK+ +K RLVA+GF Q+ V + SP ++ASI +LA+ K L H+D + + A +DEE+++++P + + + +AI G ++GR W + + G Q KADPCVFRK+VD M++ +YVDDIL D+ + A+ L +K K++G+ ++ GC I R+ +A L++ Q Y++ + +RFDVK + IPA G K E EE ++P RE +G++MW +T + PD++ AVRA G GL + VY D + D RR+VSG + +S S+ Q + + + AEY E V E LF+R V F+ P ++ EDN GAI L N ++S RTKHIDV++H +R + + V +V + +QHADLLTK L Sbjct: 1333 KTNKEGKIDTFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLAS-LNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPK-------REDEEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQRGSGLGLAVYVDASYADTED-RRSVSGLATTVGGTVVSHGSKTQSIVSLSSTEAEYIAAGEGVKEALFVRAVLSFVAPETSGSSIKVLEDNQGAIALVQNP--LSSGRTKHIDVRYHFIRGLFRSGDISVKFVPTTEQHADLLTKAL 1771
BLAST of mRNA_F-serratus_M_contig972.21055.1 vs. uniprot
Match: A0A182HDZ7_AEDAL (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Aedes albopictus TaxID=7160 RepID=A0A182HDZ7_AEDAL) HSP 1 Score: 238 bits (608), Expect = 1.710e-69 Identity = 168/476 (35.29%), Postives = 244/476 (51.26%), Query Frame = 1 Query: 22 PKDKLVVGTKMQRKIGQD--GKVQKYKCRLVAQGFWQVEGVHHTEKYSPTSAAASIWTLLAMTAAKDGELRHFDAEHVFLKADIDEEIYIEIPEEF*EFPGA---VGRLNKAICGFVKAGRCWNNKFCEDMTSIGL*QAKADPCVFRKVVDGEAEMVLAVYVDDILAHAKDQATMDRFATGLGQKVKLKDMGDAGYYMGCHITRNRKARELKLDQHFYMEPIAKRFDVKKATNIPAAAGVPT-LSKAVEPRNPEEKEEMRKFPYRETVGALMWTATMTWPDIACAV----RAGCGLC---------------------------------MEVYTDLDFRACLDMRRTVSGAVLILAKGAISWDSRMQEVTASGTPTAEYATLSEVVNEVLFLRQ-VQEFMEP*RRVGAVDFFEDN*GAINLATNKHAINSLRTKHIDVKHHLVRDASDARKVRVAYVRSEDQHADLLTKPLDMQK 1317 PK + + K K D GKV +YK RLV +G+ Q +GV + E YSP +S+ L AM A + ++ DA FL+ DI+EEIY+E P F + PG V RLNKA+ G ++ R WN K + +GL Q++ DPC++ + DG+ + +AVYVDD+L + D A + L ++KD+G A +G ITR + + + LDQ Y++ + +RF+++ A + LSK + P PEE E M+ PY+E VG LM+ A T PDI V R C C + Y+D D+ + LD RR+ SG V +L GA+SW + Q + T AEY +LS V E + R V +F E A++ DN I +A N + RTKHID++HH +RDA D + +++ YV +E+Q AD LTKPL K Sbjct: 55 PKGRSAIKCKWVYKTKHDASGKVDRYKARLVIKGYSQRKGVDYDETYSPVVRHSSLRYLFAMAAKYNLQVDQMDAITAFLQGDIEEEIYMEQPPCFVK-PGGRQLVCRLNKALYGLKQSSRVWNTKLDAALKKLGLHQSEFDPCLYYWIEDGKV-LFVAVYVDDVLIFSNDAALKNNLKAKLSSTFRMKDLGSAVSCLGIRITRAKGS--VSLDQEAYIDSMLRRFNMQDAKTVSTPMNTAEKLSKEMSPNTPEETERMKNIPYQEAVGCLMYLAQCTRPDILFTVNLLSRFNC--CYGPKHWEAVKHLFRYLKGTKTIRLKYSAAGDSKLVGYSDADWASDLDDRRSKSGYVFLLQGGAVSWCCKRQSTVSLSTCEAEYMSLSAAVQEASWWRGLVSQFGE----TDAIELRCDNQSTICIARNGGY--TPRTKHIDIRHHYIRDALDRKIIQLNYVNTEEQVADGLTKPLQRVK 518
BLAST of mRNA_F-serratus_M_contig972.21055.1 vs. uniprot
Match: A0A6H5K307_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K307_9PHAE) HSP 1 Score: 240 bits (613), Expect = 2.180e-69 Identity = 157/454 (34.58%), Postives = 234/454 (51.54%), Query Frame = 1 Query: 61 KIGQDGKVQKYKCRLVAQGFWQVEGVHHTEKYSPTSAAASIWTLLAMTAAKDGELRHFDAEHVFLKADIDEEIYIEIPEEF*EFPGAVGRLNKAICGFVKAGRCWNNKFCEDMTSIGL*QAKADPCVFRKVVDGEAEMVLAVYVDDILAHAKDQATMDRFATGLGQKVKLKDMGDAGYYMGCHITRNRKARELKLDQHFYMEPIAKRFDVKKATNIPAAAGVPTLSKAVEPRNPEEKEEMRKFPYRETVGALMWTATMTWPDIACAVRA---------------------------------------GCGLCMEVYTDLDFRACLDMRRTVSGAVLILAKGAISWDSRMQEVTASGTPTAEYATLSEVVNEVLFLRQVQEFMEP*RRVGAVDFFEDN*GAINLATNKHAINSLRTKHIDVKHHLVRDASDARKVRVAYVRSEDQHADLLTKPL 1305 K+ G K K RLVA+G Q E + + Y+PT A++S+ L A+ D EL HFD + F++A ++E I++ +PE G + +LNK++ G +A R W + + ++G Q AD C+FR V GE ++L V+VDDI A + D+F LG+ V +K +G+ +Y GC+ +R+A + + Q Y E + +R+ V+ IP +PT K + E E P+R VG+L+W A +T PDIA +VRA G L VY D RA RR+ SG V++ A GAI+W S+ Q+ T AEY ++++ E+LFLRQV FM P + +EDN GAI +A KH I++ +KHIDV+HH +R D ++V + +V S+ QHAD LTK L Sbjct: 160 KVDAFGFPTKAKARLVARGDMQKEYIDFGDLYAPTVASSSVRMLAALACELDLELCHFDIDQAFVRAPLNENIFMRMPEGCGALSGKIVQLNKSLYGLRQASREWYALLKKCLLALGFEQCMADSCLFRFVEGGEVVLLLVVHVDDIFAVGTKERC-DQFGKDLGEYVPVKSLGELKWYSGCYYEGDREAGRMTISQQTYTEELGERYGVEWGGGIP----LPTTWKLWDFDADEPSVE---HPFRALVGSLLWIALLTRPDIANSVRAVARYSGAPKLIHWKAALSFLGYAVRTSSFGISFQRGTVSGFSLITFVYADYASRAA--DRRSESGGVVMCAGGAIAWFSKTQKCVTLSTTQAEYVAMADMGKEILFLRQVWRFMLPKELRPCIPLYEDNEGAIQIA--KHPISNSNSKHIDVRHHFLRQLVDEKEVEIIHVASQYQHADSLTKAL 601
BLAST of mRNA_F-serratus_M_contig972.21055.1 vs. uniprot
Match: A0A6H5JKN1_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKN1_9PHAE) HSP 1 Score: 243 bits (619), Expect = 3.170e-69 Identity = 137/359 (38.16%), Postives = 204/359 (56.82%), Query Frame = 1 Query: 148 EKYSPTSAAASIWTLLAMTAAKDGELRHFDAEHVFLKADIDEEIYIEIPEEF*EFPGAVGRLNKAICGFVKAGRCWNNKFCEDMTSIGL*QAKADPCVFRKVVDGEAEMVLAVYVDDILAHAKDQATMDRFATGLGQKVKLKDMGDAGYYMGCHITRNRKARELKLDQHFYMEPIAKRFDVKKATNIPAAAGVPTLSKAVEPRNPEEKEEMRKFPYRETVGALMWTATMTWPDIACAVRAGCGLCMEVYTDLDFRACLDMRRTVSGAVLILAKGAISWDSRMQEVTASGTPTAEYATLSEVVNEVLFLRQVQEFMEP*RRVGAVDFFEDN*GAINLATNKHAINSLRTKHIDVKHHLVR 1224 E Y+PT A +S+ L AM ++ LRHF + F+++D+DE++++ +PE G + +LNK++ G +A R W++ +G Q AD CVFR + +G + L V+VDDI +++ D+F L V +K++GD +Y GC R+ A LK+ Q Y E + F V+ IP G+ LS+ ++ EE+ +P+RE +G+LMW AT T PDIA AVRA L +EV+ D + RR VSG +++ G ISW SR Q+ A T AEY +L++V+ EVLFLRQV FM P + + FEDN GAI LA N I++ +KHID +HH ++ Sbjct: 393 ETYAPTVAVSSVRLLAAMACEQNLSLRHFHIKQAFVQSDLDEDVFMRLPEGCGRLSGMIVKLNKSLYGLQQASRPWHSHLARCFICLGCIQCLADTCVFRLIDEGRVVVTLVVHVDDIFLIGEEERC-DQFGRDLNTMVPVKNLGDLRWYSGCCYERDWDAGTLKISQQTYAEELGMEFGVEYGKEIPLPVGL-KLSEF------DQDEEVVPWPFRELIGSLMWLATQTRPDIANAVRAVARLSIEVFADAGYARKAAGRRPVSGGLVMCGGGCISWFSRTQKCVALSTTEAEYVSLADVMKEVLFLRQVWRFMLPEAGMPCISVFEDNQGAIQLAQNP--ISNSNSKHIDERHHFMK 741
BLAST of mRNA_F-serratus_M_contig972.21055.1 vs. uniprot
Match: A0A6H5L3I1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3I1_9PHAE) HSP 1 Score: 247 bits (631), Expect = 5.620e-69 Identity = 148/457 (32.39%), Postives = 245/457 (53.61%), Query Frame = 1 Query: 61 KIGQDGKVQKYKCRLVAQGFWQVEGVHHTEKYSPTSAAASIWTLLAMTAAKDGELRHFDAEHVFLKADIDEEIYIEIPEEF*EFPGAVGRLNKAICGFVKAGRCWNNKFCEDMTSIGL*QAKADPCVFRKVVDGEAEMVLAVYVDDILAHAKDQATMDRFATGLGQKVKLKDMGDAGYYMGCHITRNRKARELKLDQHFYMEPIAKRFDVKKATNIPAAAGVPTLSKAVEPRNPEEKEEMRKFPYRETVGALMWTATMTWPDIACAVRAGCGLCME-------------------------------------VYTDLDFRACLDMRRTVSGAVLILAKGAISWDSRMQEVTASGTPTAEYATLSEVVNEVLFLRQVQEFMEP*RRVGAVDFFEDN*GAINLATNKHAINSLRTKHIDVKHHLVRDASDARKVRVAYVRSEDQHADLLTKPLDMQKF 1320 K + GK+ K K RLVA+GF Q GV + E +SPT+ AAS ++A+ + EL H+D E F+++++D E+++++P V RLNK++ G +A R + + ++ IG Q+ +DPCV ++ E ++A++VDDIL +A ++ + LG + K++G+ +++GC R+RKA +++ Q Y+ + +RF++ + ++IPA+ + R+ E+E P+RE VG+LMW A+ T DI+ AVRA E VY D DF + RR+VSGA++ +A + W SR Q+ + T +EY + + V E LF+ + +F+ P + +D EDN GAI LA N ++S R+KHIDV+HH +R+ ++ + V +V S++QHAD+LTK L F Sbjct: 733 KADETGKIVKAKARLVAKGFKQKYGVDYLETFSPTANAASFRLVVALACKYNLELLHWDIEQAFVQSELDHEVFMKMPPGCGSMSEKVVRLNKSLYGLKQASRTFYKRLVSELKRIGFEQSMSDPCVLCFMMGDEVVGMVAIHVDDIL-YAGTKSLAEVVVAALGDSLPTKNLGEVKFFLGCEYIRDRKAGTIEISQESYIRSVLERFNIVRTSSIPASLNN-------DDRSLMEEEGAGDVPFREVVGSLMWIASQTRADISNAVRAVARHSHEPKKSHWKAAQKILNYLLETAHLTLKFKRDSSVDVGTLVYVDADFASKATDRRSVSGAMVFVAAMLVVWISRTQKCVSQSTSESEYLAMGDGVKEALFVNGMLQFLRPSVKPRKIDVLEDNEGAIALAENP--LSSSRSKHIDVRHHFLRNLTEEGVIEVTHVPSKEQHADILTKALPRDLF 1179
BLAST of mRNA_F-serratus_M_contig972.21055.1 vs. uniprot
Match: A0A6H5K9B2_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9B2_9PHAE) HSP 1 Score: 243 bits (620), Expect = 1.130e-68 Identity = 146/457 (31.95%), Postives = 240/457 (52.52%), Query Frame = 1 Query: 61 KIGQDGKVQKYKCRLVAQGFWQVEGVHHTEKYSPTSAAASIWTLLAMTAAKDGELRHFDAEHVFLKADIDEEIYIEIPEEF*EFPGAVGRLNKAICGFVKAGRCWNNKFCEDMTSIGL*QAKADPCVFRKVVDGEAEMVLAVYVDDILAHAKDQATMDRFATGLGQKVKLKDMGDAGYYMGCHITRNRKARELKLDQHFYMEPIAKRFDVKKATNIPAAAGVPTLSKAVEPRNPEEKEEMRKFPYRETVGALMWTATMTWPDIACAVRA-------------------------------------GCGLCMEVYTDLDFRACLDMRRTVSGAVLILAKGAISWDSRMQEVTASGTPTAEYATLSEVVNEVLFLRQVQEFMEP*RRVGAVDFFEDN*GAINLATNKHAINSLRTKHIDVKHHLVRDASDARKVRVAYVRSEDQHADLLTKPLDMQKF 1320 K + GK+ K K RLVA+GF Q GV + E +SPT+ AAS ++A+ + EL H+D E F+++++D E+++++P G V RLNK++ + R + N+ ++ IG Q+ +DPCV R ++ E ++A++VDDIL +A ++ + LG + K++G+ +++GC R+R+A ++ Q Y+ + +F+V ++ PA+ R+ +E E + P+RE VG+LMW A T DI A RA VY D DF + + RR+VSGA++++A + W S+ Q+ + T AEY + + V E LF+ + +F+ P + +D EDN GAI LA N ++S R+KHIDV+HH +R+ ++ + V +V SE+QHAD+LTK L F Sbjct: 36 KADEIGKIVKAKARLVAKGFKQKYGVDYVETFSPTANAASHRLVVALACKYNLELLHWDIEQAFVQSELDYEVFMKLPPGCGSMSGKVVRLNKSLYELKQESRTFYNRLVSELKRIGFEQSMSDPCVLRFMMGDEVVGMVAIHVDDIL-YAGTKSLAEVVVAALGDSLPTKNLGEVKFFLGCEYIRDREAGTKEISQESYIRSVLDKFNVCSTSSTPASPANDNN------RSLKEDEGAKDVPFREVVGSLMWIANRTRCDINIATRAVARQSHNPKKRDWKASQKILNYLLETAHLTLKFKPDNSVDASTLVYVDADFASKANDRRSVSGAIVLVASMPVVWISKTQKCVSQSTSEAEYLAMGDGVKEALFVNGMLQFLRPSAKPRKIDVLEDNEGAIALAENP--LSSSRSKHIDVRHHFLRNLTEEGVIEVTHVPSEEQHADILTKALPRDLF 483
BLAST of mRNA_F-serratus_M_contig972.21055.1 vs. uniprot
Match: A0A6H5JFG2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFG2_9PHAE) HSP 1 Score: 234 bits (596), Expect = 1.890e-68 Identity = 139/414 (33.57%), Postives = 214/414 (51.69%), Query Frame = 1 Query: 190 LLAMTAAKDGELRHFDAEHVFLKADIDEEIYIEIPEEF*EFPGAVGRLNKAICGFVKAGRCWNNKFCEDMTSIGL*QAKADPCVFRKVVDGEAEMVLAVYVDDILAHAKDQATMDRFATGLGQKVKLKDMGDAGYYMGCHITRNRKARELKLDQHFYMEPIAKRFDVKKATNIPAAAGVPTLSKAVEPRNPEEKEEMRKFPYRETVGALMWTATMTWPDIACAVRAGCGLC-------------------------------------MEVYTDLDFRACLDMRRTVSGAVLILAKGAISWDSRMQEVTASGTPTAEYATLSEVVNEVLFLRQVQEFMEP*RRVGAVDFFEDN*GAINLATNKHAINSLRTKHIDVKHHLVRDASDARKVRVAYVRSEDQHADLLTKPLDMQKF 1320 L A+ + +L HFD E F++++++E++Y+ +P+ G + +L K++ G +A R W+ + ++G Q AD CVFR + DG ++L V+VDDI A ++ D+F L + V +K++G+ +Y GC RN++ L + Q + + +A + V ++P ++GV LS + E +FP+RE VG+LMW AT T PDIA AVRA C ++ Y D DF + RR+VSG ++ GA+SW SR Q+ T AEY L +VV E+LFLRQ+ FM P + + FEDN GAI LA N I++ +KHIDV+HH +R+ + +++ V +V S Q AD LTK L F Sbjct: 48 LAALACELNLDLCHFDVEQAFVRSELEEDVYMRLPQGCGALSGMIVKLGKSLYGLRQASRQWHAMLKRCLVALGFEQCMADACVFRLIEDGCVVLILVVHVDDIFA-VGERERCDKFGADLNKSVPVKNLGELRWYSGCFYERNKETGRLTISQQTFTDELAAEYGVVGGRSVPMSSGV-KLSDF------DADEVATEFPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKLVHWNAAMDILGYARRTSHFGISFQRGTVEGFSLQGYADADFASKAADRRSVSGGIVTCGGGAVSWFSRTQKCVTLSTTEAEYVALGDVVKEILFLRQIWRFMLPQVGMPCIPVFEDNQGAIQLAQNP--ISNSNSKHIDVRHHFLRELVERKEISVIHVPSPYQRADFLTKSLPKDAF 451
BLAST of mRNA_F-serratus_M_contig972.21055.1 vs. uniprot
Match: A0A2N9F319_FAGSY (Uncharacterized protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9F319_FAGSY) HSP 1 Score: 246 bits (629), Expect = 2.020e-68 Identity = 150/438 (34.25%), Postives = 242/438 (55.25%), Query Frame = 1 Query: 22 PKDKLVVGTKMQRKIGQDG--KVQKYKCRLVAQGFWQVEGVHHTEKYSPTSAAASIWTLLAMTAAKDGELRHFDAEHVFLKADIDEEIYIEIPEEF*EF--PGAVGRLNKAICGFVKAGRCWNNKFCEDMTSIGL*QAKADPCVFRKVVDGEAEMVLAVYVDDILAHAKDQATMDRFATGLGQKVKLKDMGDAGYYMGCHITRNRKARELKLDQHFYMEPIAKRFDVKKATNIPAAAGVP-TLSKAVEPRNPEEKEEMRKFPYRETVGALMWTATMTWPDIACAVRAGCGLCMEVYTDLDFRACLDMRRTVSGAVLILAKGAISWDSRMQEVTASGTPTAEYATLSEVVNEVLFLRQVQEFMEP*RRVGAVDFFEDN*GAINLATNKHAINSLRTKHIDVKHHLVRDASDARKVRVAYVRSEDQHADLLTKPLDMQKF 1320 P+ + +G K KI +DG +V++Y+ RLV +GF Q EG+ E +SP ++ +LAM A D L D + FL +++EEIY+ PE F E V +LNK++ G +A RCW +F + S+G + +DPCV+ K ++L +YVDD+L ++ + L ++ ++KD+G A +G I R+R R++ L Q Y++ I +RF+++ IP + LS ++ P N E+ EM + PY VG+LM+ T PDIA AV +G + Y D D+ LD ++ SG V LA GA+SW S++Q + A+ T AEY ++ E ++L+ + E E + + F D+ A++LA N A +S +TKHI V++H VR+ + V + + ++D AD+LTKP++ KF Sbjct: 834 PQGRKAIGNKWVYKIKRDGNDQVERYRARLVVKGFAQKEGIDFNEIFSPVVRLTTVRVVLAMCATFDLYLEQLDVKTAFLHGELEEEIYMLQPEGFEEKGKENLVCKLNKSLYGLKQAPRCWYKRFDSFIMSLGYNRHSSDPCVYYKRFGDGNFIILLLYVDDMLVAGPNKDRITDLKAQLAREFEMKDLGPANKILGMQIYRDRNNRKIWLSQKNYLKKILRRFNMQDCKPIPTPLPINFKLSSSMSPSNEAERMEMSRVPYASAVGSLMFAMVCTRPDIAQAVGSGSDFTVRGYVDSDYAGDLDKSKSTSGYVFTLAGGAVSWVSKLQSIVATSTTEAEYVAATQASKEAIWLQMLLE--ELGHKQEKIALFCDSQSALHLAKNP-AFHS-KTKHIRVQYHFVREKVEEGSVDIQKIHTKDNLADMLTKPINNDKF 1267
BLAST of mRNA_F-serratus_M_contig972.21055.1 vs. uniprot
Match: A0A6H5JCG0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCG0_9PHAE) HSP 1 Score: 235 bits (599), Expect = 5.960e-68 Identity = 145/450 (32.22%), Postives = 225/450 (50.00%), Query Frame = 1 Query: 61 KIGQDGKVQKYKCRLVAQGFWQVEGVHHTEKYSPTSAAASIWTLLAMTAAKDGELRHFDAEHVFLKADIDEEIYIEIPEEF*EFPGAVGRLNKAICGFVKAGRCWNNKFCEDMTSIGL*QAKADPCVFRKVVDGEAEMVLAVYVDDILAHAKDQATMDRFATGLGQKVKLKDMGDAGYYMGCHITRNRKARELKLDQHFYMEPIAKRFDVKKATNIPAAAGVPTLSKAVEPRNPEEKEEMRKFPYRETVGALMWTATMTWPDIACAVRA-----------------------------------GCGLCMEVYTDLDFRACLDMRRTVSGAVLILAKGAISWDSRMQEVTASGTPTAEYATLSEVVNEVLFLRQVQEFMEP*RRVGAVDFFEDN*GAINLATNKHAINSLRTKHIDVKHHLVRDASDARKVRVAYVRSEDQHADLLTKPL 1305 K +DGK++K+K RLVA+GF Q+ V + SP ++ASI +LA+ K +L H+D + F A +DE++++ +P E V + +AI G ++GR W + + G Q KADPCVFRK+ D D IL D + A+ L + KD+G+ ++ GC + R+ +A L++ Q Y++ I RFDV+ ++IPA+ GV K + E ++P RE +G++MW +T + PDI+ AVRA G GL + VY D + D RR+VSG + IS S+ Q + + + AEY E V E LF+R V F+ P ++ EDN GA+ L N ++S R+KHIDV++H +R + + + +V + +QHAD+LTK L Sbjct: 54 KTNKDGKIEKFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKSLKLNHWDVKQAFTHAKLDEDVFLRLPAGCGEKSHKVVKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMKDDVVXXXXXXXXDXILVAGSDDDCKELLAS-LNKAFPTKDLGECVWFDGCAVERDLEAGTLRISQTAYIDSIVNRFDVQSTSSIPASPGVDIGPK-------RDDESGGEWPVREAIGSMMWVSTFSRPDISFAVRAVARHAHAPAERHWKAIVKILAYLKETRDLGITYERGSGLGLAVYVDASYADAED-RRSVSGLATTVGGTVISHGSKTQAIVSLSSTEAEYIAAGEGVKEALFVRAVLSFIAPETSGSSIQVLEDNQGAMALVQNP--LSSARSKHIDVRYHFIRGLFRSGDISIKFVSTSEQHADMLTKAL 492 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig972.21055.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig972.21055.1 >prot_F-serratus_M_contig972.21055.1 ID=prot_F-serratus_M_contig972.21055.1|Name=mRNA_F-serratus_M_contig972.21055.1|organism=Fucus serratus male|type=polypeptide|length=210bp MVLAVYVDDILAHAKDQATMDRFATGLGQKVKLKDMGDAGYYMGCHITRNback to top mRNA from alignment at F-serratus_M_contig972:213256..214683+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig972.21055.1 ID=mRNA_F-serratus_M_contig972.21055.1|Name=mRNA_F-serratus_M_contig972.21055.1|organism=Fucus serratus male|type=mRNA|length=1428bp|location=Sequence derived from alignment at F-serratus_M_contig972:213256..214683+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig972:213256..214683+ >mRNA_F-serratus_M_contig972.21055.1 ID=mRNA_F-serratus_M_contig972.21055.1|Name=mRNA_F-serratus_M_contig972.21055.1|organism=Fucus serratus male|type=CDS|length=1260bp|location=Sequence derived from alignment at F-serratus_M_contig972:213256..214683+ (Fucus serratus male)back to top |