mRNA_F-serratus_M_contig969.20999.1 (mRNA) Fucus serratus male
Overview
Homology
BLAST of mRNA_F-serratus_M_contig969.20999.1 vs. uniprot
Match: A0A6H5KLG0_9PHAE (Integrase catalytic domain-containing protein (Fragment) n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLG0_9PHAE) HSP 1 Score: 268 bits (686), Expect = 6.700e-83 Identity = 129/221 (58.37%), Postives = 160/221 (72.40%), Query Frame = 1 Query: 58 MGLFTPAAK---GGYRFVSKFTDDYSRMKEIFLLKNKTEAAESLHQ*NMTVAAPLGLRIENLRCDKGGEYTGQGFRTLCVGAGINIEYTATNTPQQNGVSERDGHTLAKITRCLVKGGEFPPFMWGELMFTATYLANRSPHSTLEEATPYSQIHSLEPDLTGLRAIGTRAFVHRDTYTKKLEERAFEGKLCRYSHNSKAYRIHIPAKGTVVESRNATFLET 711 MG P AK G + + K TDDY++MKE++LL+ K++ E++H NM VAA G RIE +RCDKGGE TG FR C + +EY ATNT QQ GVSERDG TLA +TRCL+K G+FPP MWGELM TA YL NRSPHS L ATPYS++H+ PDL+GLR IG RAFVH + Y KKL++RAFEGKLC + +S+ YR+ P+ G VVESRN TF+E+ Sbjct: 1 MGSVNPPAKNKGGSFPYACKITDDYTKMKEVYLLRKKSDTTEAVHTYNMCVAAAGGYRIETIRCDKGGENTGSEFRDYCKNSATKLEYAATNTTQQIGVSERDGQTLAGVTRCLLKDGDFPPSMWGELMLTAAYLLNRSPHSALGGATPYSKLHNKSPDLSGLRVIGARAFVHHERYRKKLDDRAFEGKLCGFGLDSQTYRVLNPSNGAVVESRNVTFIES 221
BLAST of mRNA_F-serratus_M_contig969.20999.1 vs. uniprot
Match: A0A6H5L4X4_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4X4_9PHAE) HSP 1 Score: 266 bits (680), Expect = 7.190e-83 Identity = 134/240 (55.83%), Postives = 171/240 (71.25%), Query Frame = 1 Query: 1 PKKTMRKTIRPMQLVYTDLMGLFTPAAKGG---YRFVSKFTDDYSRMKEIFLLKNKTEAAESLHQ*NMTVAAPLGLRIENLRCDKGGEYTGQGFRTLCVGAGINIEYTATNTPQQNGVSERDGHTLAKITRCLVKGGEFPPFMWGELMFTATYLANRSPHSTLEEATPYSQIHSLEPDLTGLRAIGTRAFVHRDTYTKKLEERAFEGKLCRYSHNSKAYRIHIPAKGTVVESRNATFLET 711 PKKT R +P QLV D MG P AK Y +V+K TD ++RM+E++LL+++TE ++LH NM VA+ G RIE LRCDKGGE TG+ R C + I +E+ ATNTPQ+ GVSERDG TLA +TR L++ G+FP MWGELM TA YL NR+PH+ L ATPYS++++ PDL+ LRAIG RAFVH + Y KKL++RAFEGKLC Y +SK YRI++ K V ESRN TF+ET Sbjct: 209 PKKTSRVLTKPGQLVQFDNMGPIDPPAKYNGRTYSYVAKATDVFTRMREVYLLRDRTETTQALHAYNMQVASE-GYRIEILRCDKGGENTGEEMRNYCRESAIKLEFAATNTPQEIGVSERDGQTLAAVTRALLRDGDFPKHMWGELMMTAAYLTNRTPHAALGGATPYSKMYNTTPDLSRLRAIGARAFVHHERYKKKLDDRAFEGKLCGYGPDSKTYRIYVEGKDKVYESRNVTFIET 447
BLAST of mRNA_F-serratus_M_contig969.20999.1 vs. uniprot
Match: A0A6H5KT84_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT84_9PHAE) HSP 1 Score: 264 bits (675), Expect = 9.420e-81 Identity = 128/220 (58.18%), Postives = 158/220 (71.82%), Query Frame = 1 Query: 1 PKKTMRKTIRPMQLVYTDLMGLFTPAAK---GGYRFVSKFTDDYSRMKEIFLLKNKTEAAESLHQ*NMTVAAPLGLRIENLRCDKGGEYTGQGFRTLCVGAGINIEYTATNTPQQNGVSERDGHTLAKITRCLVKGGEFPPFMWGELMFTATYLANRSPHSTLEEATPYSQIHSLEPDLTGLRAIGTRAFVHRDTYTKKLEERAFEGKLCRYSHNSKAYR 651 PK++ R+ RP QLV D MG P AK G + + K TDDY++MKE++LL+ K++ E++H NM VAA G RIE +RCDKGGE TG FR C + I +EY ATNTPQQ G SERDG TLA +TRCL+K G+FPP MWGELM TA YL NRSPHS L ATPYS++H+ PDL+GLR IG RAFVH + Y KKL++RAFEGKLC + +S+ YR Sbjct: 467 PKQSTREISRPGQLVVIDNMGPVNPPAKYKGGSFPYACKITDDYTKMKEVYLLRKKSDTTEAVHTYNMCVAAAGGYRIETIRCDKGGENTGSEFRDYCKNSAIKLEYAATNTPQQIGASERDGQTLAGVTRCLLKDGDFPPSMWGELMLTAAYLLNRSPHSALGGATPYSKLHNKSPDLSGLRVIGARAFVHHERYRKKLDDRAFEGKLCGFGLDSQTYR 686
BLAST of mRNA_F-serratus_M_contig969.20999.1 vs. uniprot
Match: A0A6H5JVS2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVS2_9PHAE) HSP 1 Score: 263 bits (672), Expect = 3.880e-80 Identity = 133/240 (55.42%), Postives = 169/240 (70.42%), Query Frame = 1 Query: 1 PKKTMRKTIRPMQLVYTDLMGLFTPAAKGG---YRFVSKFTDDYSRMKEIFLLKNKTEAAESLHQ*NMTVAAPLGLRIENLRCDKGGEYTGQGFRTLCVGAGINIEYTATNTPQQNGVSERDGHTLAKITRCLVKGGEFPPFMWGELMFTATYLANRSPHSTLEEATPYSQIHSLEPDLTGLRAIGTRAFVHRDTYTKKLEERAFEGKLCRYSHNSKAYRIHIPAKGTVVESRNATFLET 711 PKKT R +P QLV D MG P AK Y +V+K TD ++RM+E++LL+++TE ++LH NM VA+ G RIE LRCDKGGE TG+ R C + I +E+ ATNTPQ+ GVSERDG TLA +TR L++ G+FP MWGELM TA YL NR+PH+ L ATPYS++++ PDL+ LRAIG RAFVH + Y KKL +R FEGKLC Y +SK YRI++ K V ESRN TF+ET Sbjct: 400 PKKTSRVLTKPGQLVQFDNMGPIDPPAKYNGRTYSYVAKATDVFTRMREVYLLRDRTETTQALHAYNMQVASE-GYRIEVLRCDKGGENTGEEMRNYCRESAIKLEFAATNTPQEIGVSERDGQTLAAVTRALLRDGDFPKHMWGELMMTAAYLTNRTPHAALGGATPYSKMYNTTPDLSRLRAIGARAFVHHERYKKKLGDRTFEGKLCGYGPDSKTYRIYVEGKDKVYESRNVTFIET 638
BLAST of mRNA_F-serratus_M_contig969.20999.1 vs. uniprot
Match: A0A6H5KWF3_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWF3_9PHAE) HSP 1 Score: 254 bits (650), Expect = 8.770e-80 Identity = 129/240 (53.75%), Postives = 169/240 (70.42%), Query Frame = 1 Query: 1 PKKTMRKTIRPMQLVYTDLMGLFTPAAKGG---YRFVSKFTDDYSRMKEIFLLKNKTEAAESLHQ*NMTVAAPLGLRIENLRCDKGGEYTGQGFRTLCVGAGINIEYTATNTPQQNGVSERDGHTLAKITRCLVKGGEFPPFMWGELMFTATYLANRSPHSTLEEATPYSQIHSLEPDLTGLRAIGTRAFVHRDTYTKKLEERAFEGKLCRYSHNSKAYRIHIPAKGTVVESRNATFLET 711 PK+T R I+P QLV D MG P AK Y +V+K TD ++RM+E++LL+++TE ++LH NM VA+ G RIE LRCDKGGE TG+ R C + I +E+ ATNTPQ+ GVSERDG TLA +TR L++ G+FP M G+LM T +L N +PH+ L ATPYS++++ PDL+ LRAIG RAFVH + Y KKL++RAFEGKLC Y +SK YRI++ K V ESRN TF+ET Sbjct: 138 PKETSRVLIKPGQLVQFDNMGPIDPPAKYNGRTYSYVAKATDVFTRMREVYLLRDRTETTQALHAYNMQVASE-GYRIEVLRCDKGGENTGEEMRNYCRESAIKLEFAATNTPQEIGVSERDGQTLAAVTRALLRDGDFPKHMCGKLMMTVAFLTNMTPHAALGGATPYSKMYNTTPDLSRLRAIGARAFVHHERYKKKLDDRAFEGKLCGYGPDSKTYRIYVEGKDKVYESRNVTFIET 376
BLAST of mRNA_F-serratus_M_contig969.20999.1 vs. uniprot
Match: A0A6H5KKW6_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKW6_9PHAE) HSP 1 Score: 255 bits (651), Expect = 9.400e-80 Identity = 129/240 (53.75%), Postives = 168/240 (70.00%), Query Frame = 1 Query: 1 PKKTMRKTIRPMQLVYTDLMGLFTPAAKGG---YRFVSKFTDDYSRMKEIFLLKNKTEAAESLHQ*NMTVAAPLGLRIENLRCDKGGEYTGQGFRTLCVGAGINIEYTATNTPQQNGVSERDGHTLAKITRCLVKGGEFPPFMWGELMFTATYLANRSPHSTLEEATPYSQIHSLEPDLTGLRAIGTRAFVHRDTYTKKLEERAFEGKLCRYSHNSKAYRIHIPAKGTVVESRNATFLET 711 P KT R +P QLV D MG P A+ Y +V+K TD ++RM+E++LL+++TE ++LH NM VA+ G RIE LRCDKGGE TG+ R C + I E+ ATNTPQ+ GVSERD TLA +TR L++ G+FP MWGELM TA YL NR+PH+ L ATPYS++++ PDL+ LRAIG RAFVH + + KKL++RAFEGKLC Y +SK YRI++ K + ESRN TF+ET Sbjct: 61 PTKTSRVLTKPGQLVQFDNMGPIDPPAEYNGRIYAYVAKATDVFTRMREVYLLRDRTETTQALHAYNMQVASE-GYRIEVLRCDKGGENTGEEMRNYCRESAIKPEFAATNTPQEIGVSERDSKTLAAVTRALLRDGDFPKHMWGELMMTAAYLTNRTPHAALGGATPYSKMYNTTPDLSRLRAIGARAFVHHERFKKKLDDRAFEGKLCGYGPDSKTYRIYVEGKDKMYESRNVTFIET 299
BLAST of mRNA_F-serratus_M_contig969.20999.1 vs. uniprot
Match: A0A6H5JL01_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL01_9PHAE) HSP 1 Score: 265 bits (676), Expect = 4.660e-79 Identity = 133/240 (55.42%), Postives = 170/240 (70.83%), Query Frame = 1 Query: 1 PKKTMRKTIRPMQLVYTDLMGLFTPAAKGG---YRFVSKFTDDYSRMKEIFLLKNKTEAAESLHQ*NMTVAAPLGLRIENLRCDKGGEYTGQGFRTLCVGAGINIEYTATNTPQQNGVSERDGHTLAKITRCLVKGGEFPPFMWGELMFTATYLANRSPHSTLEEATPYSQIHSLEPDLTGLRAIGTRAFVHRDTYTKKLEERAFEGKLCRYSHNSKAYRIHIPAKGTVVESRNATFLET 711 PKKT R +P QLV D MG P AK Y +V+K TD ++RM+E++LL+++TE ++LH NM VA+ G RIE LRCDKGGE TG+ R C + I +E+ TNTPQ+ GVSERDG TLA +TR L++ G+FP MWGELM TA YL NR+PH+ L ATPYS++++ PDL+ LRAIG RAFVH + Y KKL++RAFEGKLC Y +SK YRI++ K V ESRN TF+ET Sbjct: 282 PKKTSRVLTKPGQLVQFDNMGPIDPPAKYNGRTYSYVAKATDVFTRMREVYLLRDRTETTQALHAYNMQVASE-GYRIEVLRCDKGGENTGEEMRNYCRESAIKLEFAVTNTPQEIGVSERDGQTLAAVTRALLRDGDFPKHMWGELMMTAAYLTNRTPHAALGGATPYSKMYNTTPDLSRLRAIGARAFVHHERYKKKLDDRAFEGKLCGYGPDSKTYRIYVEGKDKVYESRNVTFIET 520
BLAST of mRNA_F-serratus_M_contig969.20999.1 vs. uniprot
Match: A0A6H5KBQ2_9PHAE (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBQ2_9PHAE) HSP 1 Score: 263 bits (673), Expect = 1.010e-78 Identity = 134/240 (55.83%), Postives = 169/240 (70.42%), Query Frame = 1 Query: 1 PKKTMRKTIRPMQLVYTDLMGLFTPAAKGG---YRFVSKFTDDYSRMKEIFLLKNKTEAAESLHQ*NMTVAAPLGLRIENLRCDKGGEYTGQGFRTLCVGAGINIEYTATNTPQQNGVSERDGHTLAKITRCLVKGGEFPPFMWGELMFTATYLANRSPHSTLEEATPYSQIHSLEPDLTGLRAIGTRAFVHRDTYTKKLEERAFEGKLCRYSHNSKAYRIHIPAKGTVVESRNATFLET 711 PKKT R +P QLV D MG P AK Y +V+K TD ++RM+E++LL++KTE ++LH NM VA+ G RIE LRC KGGE TG R C + I +E+ ATNTPQ+ GVSERDG TLA +TR L++ G+FP MWGELM TA YL NR+PH+ L ATPYS++++ PDL+ LRAIG RAFVH + Y KKL++RAFEGKLC Y +SK YRI++ K V ESRN TF+ET Sbjct: 255 PKKTSRVLTKPGQLVQFDNMGPIDPPAKYNGRTYSYVAKATDVFTRMREVYLLRDKTETTQALHAYNMQVASE-GYRIEVLRCKKGGENTGDEMRNYCRESAIKLEFAATNTPQEIGVSERDGQTLAAVTRALLRDGDFPKRMWGELMMTAAYLTNRTPHAALGGATPYSKMYNTTPDLSRLRAIGARAFVHHERYKKKLDDRAFEGKLCAYGPDSKTYRIYVEGKDKVYESRNVTFIET 493
BLAST of mRNA_F-serratus_M_contig969.20999.1 vs. uniprot
Match: A0A6H5KVF6_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVF6_9PHAE) HSP 1 Score: 257 bits (656), Expect = 1.950e-78 Identity = 125/210 (59.52%), Postives = 152/210 (72.38%), Query Frame = 1 Query: 1 PKKTMRKTIRPMQLVYTDLMGLFTPAAK---GGYRFVSKFTDDYSRMKEIFLLKNKTEAAESLHQ*NMTVAAPLGLRIENLRCDKGGEYTGQGFRTLCVGAGINIEYTATNTPQQNGVSERDGHTLAKITRCLVKGGEFPPFMWGELMFTATYLANRSPHSTLEEATPYSQIHSLEPDLTGLRAIGTRAFVHRDTYTKKLEERAFEGKLC 621 PK++ R+ RP QLV D MG P AK G + + K TDDY++MKE++LL+ K++ E++H NM VAA G RIE +RCDKGGE TG FR C + I +EY ATNTPQQ GVSERDG TLA +TRCL+K G+FPP MWGELM TA YL NRSPHS L ATPYS++ + PDL+GLR IG RAFVH + Y KKL++RAFEGKLC Sbjct: 415 PKQSTRELSRPGQLVVIDNMGPVNPPAKYKGGSFPYACKVTDDYTKMKEVYLLRKKSDTTEAVHTYNMCVAAAGGYRIETIRCDKGGENTGSEFRDYCKNSAIKLEYAATNTPQQIGVSERDGQTLAGVTRCLLKDGDFPPSMWGELMLTAAYLLNRSPHSALGGATPYSKLRNKSPDLSGLRVIGARAFVHHERYRKKLDDRAFEGKLC 624
BLAST of mRNA_F-serratus_M_contig969.20999.1 vs. uniprot
Match: A0A6H5K3T5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3T5_9PHAE) HSP 1 Score: 264 bits (675), Expect = 2.290e-78 Identity = 133/240 (55.42%), Postives = 170/240 (70.83%), Query Frame = 1 Query: 1 PKKTMRKTIRPMQLVYTDLMGLFTPAAKGG---YRFVSKFTDDYSRMKEIFLLKNKTEAAESLHQ*NMTVAAPLGLRIENLRCDKGGEYTGQGFRTLCVGAGINIEYTATNTPQQNGVSERDGHTLAKITRCLVKGGEFPPFMWGELMFTATYLANRSPHSTLEEATPYSQIHSLEPDLTGLRAIGTRAFVHRDTYTKKLEERAFEGKLCRYSHNSKAYRIHIPAKGTVVESRNATFLET 711 PK T R +P QLV D MG P AK Y +V+K TD ++RM+E++LL+++TE ++LH NM VA+ G RIE LRCDKGGE TG+ R C + I +E+ ATNTPQ+ GVSERDG TLA +TR L++ G+FP MWGELM TA YL NR+PH+ L ATPYS++++ PDL+ LRAIG RAFVH + Y KKL++RAFEGKLC Y +SK YRI++ K V ESRN TF+ET Sbjct: 598 PKNTSRVLTKPGQLVQFDNMGPIDPPAKYNGRTYSYVAKATDVFTRMREVYLLRDRTETTQALHAYNMQVASE-GYRIEVLRCDKGGENTGEEMRNYCRESAIKLEFAATNTPQEIGVSERDGQTLAAVTRALLRDGDFPKHMWGELMMTAAYLTNRTPHAALGGATPYSKMYNTTPDLSRLRAIGARAFVHHERYKKKLDDRAFEGKLCGYGPDSKTYRIYVEGKDKVYESRNVTFIET 836 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig969.20999.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig969.20999.1 >prot_F-serratus_M_contig969.20999.1 ID=prot_F-serratus_M_contig969.20999.1|Name=mRNA_F-serratus_M_contig969.20999.1|organism=Fucus serratus male|type=polypeptide|length=173bp MTVAAPLGLRIENLRCDKGGEYTGQGFRTLCVGAGINIEYTATNTPQQNGback to top mRNA from alignment at F-serratus_M_contig969:279436..280146- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig969.20999.1 ID=mRNA_F-serratus_M_contig969.20999.1|Name=mRNA_F-serratus_M_contig969.20999.1|organism=Fucus serratus male|type=mRNA|length=711bp|location=Sequence derived from alignment at F-serratus_M_contig969:279436..280146- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig969:279436..280146- >mRNA_F-serratus_M_contig969.20999.1 ID=mRNA_F-serratus_M_contig969.20999.1|Name=mRNA_F-serratus_M_contig969.20999.1|organism=Fucus serratus male|type=CDS|length=1038bp|location=Sequence derived from alignment at F-serratus_M_contig969:279436..280146- (Fucus serratus male)back to top |