mRNA_F-serratus_M_contig966.20985.1 (mRNA) Fucus serratus male
Overview
Homology
BLAST of mRNA_F-serratus_M_contig966.20985.1 vs. uniprot
Match: A0A6H5KT07_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT07_9PHAE) HSP 1 Score: 154 bits (389), Expect = 7.110e-40 Identity = 103/214 (48.13%), Postives = 122/214 (57.01%), Query Frame = 3 Query: 3 LEPLEPGGMRINVGLLPDRLMAAEIVGSLGGRSGGVGAGVGGLSG--------EPFMGSACRYVSFVDGSSDSGPASV-GHGFSALNAGLQAPSGPLIATVEVCPDVPSLDAFPDPV-----------AVETTSPALESGVAIAMSGELAAMFNEATR---GIRKLIAAKSPSVAGPGYTRGKWLWEWEIESCGNLVGVGVCGRDVAAMSAAGV 575 LEPL+PGGMR+NVGLLPDRL+AAE G GG S +P MGS+CR V V S G GFSALNAGL + SGPLIATVEV P+ PS FPDP A E + + A +G + ++A G R+L+ A++PSVAG GY GKWLWEW + SCGN V VGVC RDVAA+SAAGV Sbjct: 6386 LEPLQPGGMRLNVGLLPDRLLAAE-----GNNPGGXXXXXXXRSSXXXXXXXTDPGMGSSCRSVWVVGXXXXXXXXSAAGRGFSALNAGLPSQSGPLIATVEVHPEPPSAADFPDPASWDEATAMTASATEERAAGTDGTAAATATGSSSGGVSDAGSAGPGSRRLVVAEAPSVAGEGYQTGKWLWEWHVMSCGNRVSVGVCRRDVAAISAAGV 6594
BLAST of mRNA_F-serratus_M_contig966.20985.1 vs. uniprot
Match: D8LCZ5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCZ5_ECTSI) HSP 1 Score: 152 bits (384), Expect = 3.330e-39 Identity = 107/215 (49.77%), Postives = 119/215 (55.35%), Query Frame = 3 Query: 3 LEPLEPGGMRINVGLLPDRLMAAEIVGSLGGRSGGVGAGVGGLSGEPF--------MGSACRYVSFVDGSSDSGPASV-GHGFSALNAGLQAPSGPLIATVEVCPDVPSLDAFPDPV----AVETTSPALESGVAIAMSGELAAMFN-----------EATRGIRKLIAAKSPSVAGPGYTRGKWLWEWEIESCGNLVGVGVCGRDVAAMSAAGV 575 LEPL+PGGMR+NVGLLPDRL+AAE G GG MGS+CR V V G G S G GFSALNAGL + SGPLIATVEV P+ PS FPDP A T+ A E A G AA A G R+L+ A++PSVAG GY GKWLWEW I SCGN VGVC RDVAA+SAAGV Sbjct: 5869 LEPLQPGGMRLNVGLLPDRLLAAE-----GNNPGGXXXXXXXXXXXXXXXXGTDLAMGSSCRSVWVVGGXXXXGGLSAAGRGFSALNAGLPSQSGPLIATVEVHPEPPSAADFPDPASWDAATAMTASATEERAA-GTDGTAAATATGSSSGGVSGAGSAEPGSRRLVVAEAPSVAGEGYQTGKWLWEWHIVSCGNRASVGVCRRDVAAISAAGV 6077 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig966.20985.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig966.20985.1 >prot_F-serratus_M_contig966.20985.1 ID=prot_F-serratus_M_contig966.20985.1|Name=mRNA_F-serratus_M_contig966.20985.1|organism=Fucus serratus male|type=polypeptide|length=184bp MRINVGLLPDRLMAAEIVGSLGGRSGGVGAGVGGLSGEPFMGSACRYVSFback to top mRNA from alignment at F-serratus_M_contig966:120690..121730- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig966.20985.1 ID=mRNA_F-serratus_M_contig966.20985.1|Name=mRNA_F-serratus_M_contig966.20985.1|organism=Fucus serratus male|type=mRNA|length=1041bp|location=Sequence derived from alignment at F-serratus_M_contig966:120690..121730- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig966:120690..121730- >mRNA_F-serratus_M_contig966.20985.1 ID=mRNA_F-serratus_M_contig966.20985.1|Name=mRNA_F-serratus_M_contig966.20985.1|organism=Fucus serratus male|type=CDS|length=1104bp|location=Sequence derived from alignment at F-serratus_M_contig966:120690..121730- (Fucus serratus male)back to top |