mRNA_F-serratus_M_contig965.20971.1 (mRNA) Fucus serratus male
Overview
Homology
BLAST of mRNA_F-serratus_M_contig965.20971.1 vs. uniprot
Match: D8LRF1_ECTSI (C2H2 zinc finger protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRF1_ECTSI) HSP 1 Score: 163 bits (412), Expect = 5.500e-42 Identity = 94/234 (40.17%), Postives = 140/234 (59.83%), Query Frame = 1 Query: 130 WEGFGMGRCWVARLGTGPEGKTVF*LQPKQLPF----NDGFSYDDDKPVGRCGAKIRRVYTNREKAAAVEKLRQYQKQGDAIFTAHRMTPLQFTAKTVGTAESNIFKWAKGEALIIEKAAAVVTRDLMKNHRARTWFPKAESELHVLFRTKRKRGLKVSTLWLCVTMTGLIKKYYRDDPRAETFTPSWRYVEKWAKKFRVATRRRSNSKNQSIEEPLPKIQRFHVSLQRLMQNP 819 WE G GRC+ ++ G G F LQPK++P +DGF+ + + R AK R Y R KA +++LR ++ A++ A ++P+Q+ + +NI KW K E I+ AA V + L+ + + WFP AE EL F +RK+ LKVSTLWL VT L+++++ D RA F PS+R+++KWAK+ +V RRRSN K +SIEE LP+IQRFH ++L++ P Sbjct: 217 WERAGPGRCYHVKI-DGITGAASFVLQPKRVPNIDLESDGFTPAEPRSARRGAAKRNR-YDFRFKAHVIQQLRILEEDRQALWQAEHLSPMQYLETHMKVPRTNISKWVKDEDEIVAFAADEVKQTLLAKQQPKRWFPAAERELFNRFLARRKKKLKVSTLWLTVTFRKLLEEHHPTDSRAAVFRPSFRWMQKWAKRHKVVPRRRSNLKAKSIEERLPRIQRFHRRFRQLIEEP 448
BLAST of mRNA_F-serratus_M_contig965.20971.1 vs. uniprot
Match: A0A6H5J6R3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J6R3_9PHAE) HSP 1 Score: 162 bits (410), Expect = 2.380e-41 Identity = 98/234 (41.88%), Postives = 131/234 (55.98%), Query Frame = 1 Query: 130 WEGFGMGRCWVARLGTGPEGKTVF*LQPKQLPF----NDGFSYDDDKPVGRCGAKIRRVYTNREKAAAVEKLRQYQKQGDAIFTAHRMTPLQFTAKTVGTAESNIFKWAKGEALIIEKAAAVVTRDLMKNHRARTWFPKAESELHVLFRTKRKRGLKVSTLWLCVTMTGLIKKYYRDDPRAETFTPSWRYVEKWAKKFRVATRRRSNSKNQSIEEPLPKIQRFHVSLQRLMQNP 819 WE G GRCW ++ G F LQ K+ +DGF + K GA RR Y R KA AV +LR + I+ TPLQ A + SNI KWAK E I+ AA V + L+ + + WFP+AE L+ +F +RKR LKVSTLWL +T L+++ Y D RA F S+R+ KWAK+ ++ RRR+N KN+S+EE LPKIQRFH ++L+Q P Sbjct: 224 WEEAGPGRCWHVKVDDAT-GAASFVLQRKRFLGLDLESDGFMDRETKETR--GAPKRRRYDYRFKANAVNQLRILEDNAADIWKEEERTPLQCLADRLKVHYSNIVKWAKDEKAIVAAAADDVKKSLLAKQQPKRWFPEAEKRLYKMFVERRKRKLKVSTLWLTITFRKLVREMYPGDQRAAAFRASFRWARKWAKRHNLSKRRRTNLKNKSVEERLPKIQRFHRLFRKLLQEP 454
BLAST of mRNA_F-serratus_M_contig965.20971.1 vs. uniprot
Match: A0A6H5JFX9_9PHAE (C2H2-type domain-containing protein n=15 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JFX9_9PHAE) HSP 1 Score: 162 bits (409), Expect = 3.240e-41 Identity = 95/234 (40.60%), Postives = 138/234 (58.97%), Query Frame = 1 Query: 130 WEGFGMGRCWVARLGTGPEGKTVF*LQPKQLPF----NDGFSYDDDKPVGRCGAKIRRVYTNREKAAAVEKLRQYQKQGDAIFTAHRMTPLQFTAKTVGTAESNIFKWAKGEALIIEKAAAVVTRDLMKNHRARTWFPKAESELHVLFRTKRKRGLKVSTLWLCVTMTGLIKKYYRDDPRAETFTPSWRYVEKWAKKFRVATRRRSNSKNQSIEEPLPKIQRFHVSLQRLMQNP 819 W G GRCW ++ G G F LQ K+ +DGF+ D K GA R+ Y R KA V +LR Q+ +F ++TPLQ+ + S I KWA+ EA I++ AA V + L+ + + WFP+ E +L+ +F +R+R LKVSTLWL VT L+++ + +D RA F+ S+R+ KWAK+ +++ RRRSN KN+S+EE LPKIQRFH ++L+Q P Sbjct: 225 WGEAGPGRCWHVKV-DGATGAASFVLQRKRFRDLDLESDGFT--DRKVKETRGAVKRKRYDFRFKAHVVTQLRLLQEDAADLFKEEQLTPLQYLEDRLKVNYSLIVKWAQDEANIVQSAADDVKKTLLAKQQPKRWFPEEEKKLYNMFLARRRRKLKVSTLWLTVTFRKLVQENHPEDQRAAAFSASFRWARKWAKRHKLSKRRRSNLKNKSVEERLPKIQRFHRRFRKLLQEP 455
BLAST of mRNA_F-serratus_M_contig965.20971.1 vs. uniprot
Match: A0A6H5KDV1_9PHAE (C2H2-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDV1_9PHAE) HSP 1 Score: 160 bits (405), Expect = 4.590e-41 Identity = 94/234 (40.17%), Postives = 138/234 (58.97%), Query Frame = 1 Query: 130 WEGFGMGRCWVARLGTGPEGKTVF*LQPKQLPF----NDGFSYDDDKPVGRCGAKIRRVYTNREKAAAVEKLRQYQKQGDAIFTAHRMTPLQFTAKTVGTAESNIFKWAKGEALIIEKAAAVVTRDLMKNHRARTWFPKAESELHVLFRTKRKRGLKVSTLWLCVTMTGLIKKYYRDDPRAETFTPSWRYVEKWAKKFRVATRRRSNSKNQSIEEPLPKIQRFHVSLQRLMQNP 819 W G GRCW ++ G G F LQ K+ +DGF+ + K GA R+ Y R KA V +LR Q+ +F ++TPLQ+ + S I KWA+ EA I++ AA V + L+ + + WFP+ E +L+ +F +R+R LKVSTLWL VT L+++ + +D RA F+ S+R+ KWAK+ +++ RRRSN KN+S+EE LPKIQRFH ++L+Q P Sbjct: 111 WGEAGPGRCWHVKV-DGATGAASFVLQRKRFRDLDLESDGFT--ERKVKEARGAVKRKRYDFRFKAHVVTQLRLLQEDAADLFKEEQLTPLQYLEDRLKVNYSLIVKWAQDEANIVQSAADDVKKTLLAKQQPKRWFPEEEKKLYNMFLARRRRKLKVSTLWLTVTFRKLVQENHPEDQRAAAFSASFRWARKWAKRHKLSKRRRSNLKNKSVEERLPKIQRFHRRFRKLLQEP 341
BLAST of mRNA_F-serratus_M_contig965.20971.1 vs. uniprot
Match: A0A6H5JKG3_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKG3_9PHAE) HSP 1 Score: 160 bits (404), Expect = 6.630e-41 Identity = 95/234 (40.60%), Postives = 137/234 (58.55%), Query Frame = 1 Query: 130 WEGFGMGRCWVARLGTGPEGKTVF*LQPKQLPF----NDGFSYDDDKPVGRCGAKIRRVYTNREKAAAVEKLRQYQKQGDAIFTAHRMTPLQFTAKTVGTAESNIFKWAKGEALIIEKAAAVVTRDLMKNHRARTWFPKAESELHVLFRTKRKRGLKVSTLWLCVTMTGLIKKYYRDDPRAETFTPSWRYVEKWAKKFRVATRRRSNSKNQSIEEPLPKIQRFHVSLQRLMQNP 819 W G GRCW ++ G G F LQ K+ +DGF+ D K GA + Y R KA AV +LR Q+ +F ++TPLQ+ + S I KWA+ EA I++ AA V + L+ + + WFP+ E +L+ F +R+R LKVSTLWL VT L+++ + +D RA F+ S+R+ KWAK+ +++ RRRSN KN+S+EE LPKIQRFH ++L+Q P Sbjct: 43 WGEAGPGRCWHVKV-DGATGAASFVLQRKRFRDLDLESDGFT--DRKVKETRGADKGKRYDFRCKAHAVTQLRLLQEDAADVFKEEQLTPLQYLEDRLKVNYSLIVKWAQDEANIVQSAADDVKKTLLAKQQPKRWFPEEEKKLYNTFLARRRRKLKVSTLWLTVTFRKLVQENHPEDQRAAAFSASFRWARKWAKRHKLSKRRRSNLKNKSVEERLPKIQRFHRRFRKLLQEP 273
BLAST of mRNA_F-serratus_M_contig965.20971.1 vs. uniprot
Match: A0A6H5JMI5_9PHAE (C2H2-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMI5_9PHAE) HSP 1 Score: 154 bits (388), Expect = 1.290e-40 Identity = 92/233 (39.48%), Postives = 122/233 (52.36%), Query Frame = 1 Query: 130 WEGFGMGRCWVARLGTG---------PEGKTVF*LQPKQLP-------FNDGFSYDDDKPVGRCGAKIRRVYTNREKAAAVEKLRQYQKQGDAIFTAHRMTPLQFTAKTVGTAESNIFKWAKGEALIIEKAAAVVTRDLMKN-HRARTWFPKAESELHVLFRTKRKRGLKVSTLWLCVTMTGLIKKYYRDDPRAETFTPSWRYVEKWAKKFRVATRRRSNSKNQSIEEPLPKI 777 W G GRC G P G F LQP + NDGFS + P CGA RR YT+REK +++LR + + + MTPL + G + SNI KW K E ++++AA V LM R R WFP AE ELH + +RKR L+VST W+ VT L + Y DPRA+ F PS+R+ +KWA + ++ RRRS+SKN+S+EE L I Sbjct: 128 WGGTPSGRCCHVAFHHGESRGCGATCPPGSVTFVLQPLRPGAERNNNLVNDGFSQSESPPKKTCGAASRRRYTSREKVGVIQELRDLESRSTEVRAHFGMTPLFYLEHKSGISASNISKWQKDEDSLVQQAADKVRSSLMATCTRRRLWFPDAEKELHKMLLARRKRKLRVSTRWITVTFKKLTMESYPQDPRAKAFRPSFRFAQKWATRHSLSKRRRSDSKNKSVEERLQNI 360
BLAST of mRNA_F-serratus_M_contig965.20971.1 vs. uniprot
Match: A0A6H5KCI3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCI3_9PHAE) HSP 1 Score: 155 bits (393), Expect = 1.640e-40 Identity = 94/234 (40.17%), Postives = 129/234 (55.13%), Query Frame = 1 Query: 130 WEGFGMGRCWVARLGTGPEGKTVF*LQPKQLPF----NDGFSYDDDKPVGRCGAKIRRVYTNREKAAAVEKLRQYQKQGDAIFTAHRMTPLQFTAKTVGTAESNIFKWAKGEALIIEKAAAVVTRDLMKNHRARTWFPKAESELHVLFRTKRKRGLKVSTLWLCVTMTGLIKKYYRDDPRAETFTPSWRYVEKWAKKFRVATRRRSNSKNQSIEEPLPKIQRFHVSLQRLMQNP 819 WE G GRCW + G F L+ K+ +DGF D KP GA RR Y R KA AV +LR + + ++ + TPL F + SNI KWAK E ++ AA V + L+ + + WFP+AE L+ F +RKR LKVSTLWL +T L+++ D RA +F S+R+ KWAK+ ++ RRR+N KN+S+EE PKIQRFH + L+Q P Sbjct: 184 WEAAGPGRCWHVKFDHAT-GTASFVLRRKRFLDLDLDSDGFM--DRKPKDTRGAPKRRRYDFRFKAHAVNQLRILEDNAEDLWKEEQRTPLLFFEDRLKIPYSNIVKWAKNEKELVAAAADDVKKSLLAKQQPKRWFPEAEKRLYKGFVERRKRKLKVSTLWLTITFRKLVREMNPGDQRAASFRASFRWARKWAKRHNLSNRRRTNLKNKSVEERFPKIQRFHRLFRELLQEP 414
BLAST of mRNA_F-serratus_M_contig965.20971.1 vs. uniprot
Match: A0A6H5K4R4_9PHAE (C2H2-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4R4_9PHAE) HSP 1 Score: 158 bits (400), Expect = 5.100e-40 Identity = 94/234 (40.17%), Postives = 136/234 (58.12%), Query Frame = 1 Query: 130 WEGFGMGRCWVARLGTGPEGKTVF*LQPKQLPF----NDGFSYDDDKPVGRCGAKIRRVYTNREKAAAVEKLRQYQKQGDAIFTAHRMTPLQFTAKTVGTAESNIFKWAKGEALIIEKAAAVVTRDLMKNHRARTWFPKAESELHVLFRTKRKRGLKVSTLWLCVTMTGLIKKYYRDDPRAETFTPSWRYVEKWAKKFRVATRRRSNSKNQSIEEPLPKIQRFHVSLQRLMQNP 819 W G GRCW ++ G G F LQ K+ +DGF+ D K GA R+ Y R K V +LR Q+ +F ++TPLQ+ + S I KWA+ EA I++ AA V + L+ + + WFP+ E +L +F +R+R LKVSTLWL VT L+++ + +D RA F+ S+R+ KWAK+ +++ RRRSN KN+S+EE LPKIQRFH ++L+Q P Sbjct: 225 WGEAGPGRCWHVKV-DGATGAASFVLQRKRFRDLDLESDGFT--DRKVKETRGAVKRKRYDFRFKTHVVIQLRLLQEDAADLFKEEQLTPLQYLEDRLKVNYSLIVKWAQDEANIVQSAADDVKKTLLAKQQPKRWFPEEEKKLSNMFLARRRRKLKVSTLWLTVTFRKLVQENHPEDQRAAAFSASFRWARKWAKRHKLSKRRRSNLKNKSVEERLPKIQRFHRRFRKLLQEP 455
BLAST of mRNA_F-serratus_M_contig965.20971.1 vs. uniprot
Match: A0A6H5KWF5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWF5_9PHAE) HSP 1 Score: 156 bits (394), Expect = 2.560e-39 Identity = 94/234 (40.17%), Postives = 129/234 (55.13%), Query Frame = 1 Query: 130 WEGFGMGRCWVARLGTGPEGKTVF*LQPKQLPF----NDGFSYDDDKPVGRCGAKIRRVYTNREKAAAVEKLRQYQKQGDAIFTAHRMTPLQFTAKTVGTAESNIFKWAKGEALIIEKAAAVVTRDLMKNHRARTWFPKAESELHVLFRTKRKRGLKVSTLWLCVTMTGLIKKYYRDDPRAETFTPSWRYVEKWAKKFRVATRRRSNSKNQSIEEPLPKIQRFHVSLQRLMQNP 819 W G GRCW ++ G F LQ K+ +DGF + K GA RR Y NR KA AV +LR + ++ TPLQ+ + SNI KWAK E I+ AA V + L+ + + WFP+AE+ L+ + +RKR LKVST+WL T L++ Y D RA F S+R+ KWAK+ ++ RRR+N KN+S+EE LPKIQRFH ++L+Q P Sbjct: 179 WGEAGPGRCWHVKVDDAT-GAASFVLQRKRFLDLDLESDGFMDRETKETR--GAPKRRRYDNRFKANAVNQLRILEDNAANLWKEEERTPLQYLEDRLRVHYSNIVKWAKDEKAIVAAAADDVKKSLLAKQQPKRWFPEAETRLYKMSVERRKRKLKVSTVWLTTTFRKLVRDMYPGDQRAAAFRASFRWARKWAKRHNLSKRRRTNLKNKSVEERLPKIQRFHRLFRKLLQEP 409
BLAST of mRNA_F-serratus_M_contig965.20971.1 vs. uniprot
Match: A0A6H5L1Y1_9PHAE (HTH CENPB-type domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1Y1_9PHAE) HSP 1 Score: 156 bits (394), Expect = 3.360e-39 Identity = 95/234 (40.60%), Postives = 129/234 (55.13%), Query Frame = 1 Query: 130 WEGFGMGRCWVARLGTGPEGKTVF*LQPKQLPF----NDGFSYDDDKPVGRCGAKIRRVYTNREKAAAVEKLRQYQKQGDAIFTAHRMTPLQFTAKTVGTAESNIFKWAKGEALIIEKAAAVVTRDLMKNHRARTWFPKAESELHVLFRTKRKRGLKVSTLWLCVTMTGLIKKYYRDDPRAETFTPSWRYVEKWAKKFRVATRRRSNSKNQSIEEPLPKIQRFHVSLQRLMQNP 819 WE G GRCW ++ G F LQ K+ +DGF + K GA RR Y R KA AV +LR + ++ TPLQ+ + SNI KWAK E I+ AA V + L+ + + WFP+AE L+ +F +RKR LKVSTLWL +T L+++ Y D RA F S+R+ KWAK+ ++ RRR+N KN+S EE LP IQRFH ++L+Q P Sbjct: 344 WEEPGPGRCWHVKVDDAT-GAASFVLQRKRFLDLDLESDGFMDRETKETR--GAPKRRRYDYRFKANAVNQLRILEDNAADLWKEEERTPLQYLEDRLKVHYSNIVKWAKDEKAIVAAAADDVKKSLLAKQQPKRWFPEAEKRLYKMFVERRKRKLKVSTLWLTITFRKLVREMYPGDQRAAAFRASFRWARKWAKRHNLSKRRRTNLKNKSGEERLPNIQRFHRLFRKLLQEP 574 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig965.20971.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig965.20971.1 >prot_F-serratus_M_contig965.20971.1 ID=prot_F-serratus_M_contig965.20971.1|Name=mRNA_F-serratus_M_contig965.20971.1|organism=Fucus serratus male|type=polypeptide|length=164bp MTPLQFTAKTVGTAESNIFKWAKGEALIIEKAAAVVTRDLMKNHRARTWFback to top mRNA from alignment at F-serratus_M_contig965:158052..158921+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig965.20971.1 ID=mRNA_F-serratus_M_contig965.20971.1|Name=mRNA_F-serratus_M_contig965.20971.1|organism=Fucus serratus male|type=mRNA|length=870bp|location=Sequence derived from alignment at F-serratus_M_contig965:158052..158921+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig965:158052..158921+ >mRNA_F-serratus_M_contig965.20971.1 ID=mRNA_F-serratus_M_contig965.20971.1|Name=mRNA_F-serratus_M_contig965.20971.1|organism=Fucus serratus male|type=CDS|length=984bp|location=Sequence derived from alignment at F-serratus_M_contig965:158052..158921+ (Fucus serratus male)back to top |