mRNA_F-serratus_M_contig964.20966.1 (mRNA) Fucus serratus male
Overview
Homology
BLAST of mRNA_F-serratus_M_contig964.20966.1 vs. uniprot
Match: A0A6H5K8Z5_9PHAE (Reverse transcriptase domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8Z5_9PHAE) HSP 1 Score: 546 bits (1406), Expect = 1.080e-163 Identity = 311/656 (47.41%), Postives = 413/656 (62.96%), Query Frame = -3 Query: 3462 YFAPPKVACPIRSKAPTAARDKHVWITF*QSRRTADSSAALMSDAPPLESPESDHNLVYAKVRIPHRSAPNRRKRDTRETPKLA-NLRRLMTDPNLRFQVANAVVDALPPIPDGTCISDIATDMADVMLSTAAELVPRPKRPRGAQGWCAGLGVEAEMNAAWQEREEARRRLRAEPHNSNLRKAVKIAGKILPKVRKAAE---LSCFWD-FVRKLEKRTREGDQAGFYKHLKAMNLEGKRDRRSAYVKYENGVLLRDVEPIRERWVQWFHTLLNAKSPRLDPNMADGLDQWPENMPLGVQSTMQELTDAIRSLANGKAVGPDGVSVELFKTTLNGDPALRRRLFDVIVRIWRGGEVP*QWKDAIIMVLHKKKDRTECGNYRGISLVAHAGKILLKIIARRLSEYCERVGILPEEQSGFRPNRSTTDMMFVIRRLQELARKKRIPLYVCFIDLTKAYDSVDRTLL*TVLARFGVPQIVISVIRQFHDGMQACVRLDDRVYSRWFAVEQGLRQGCVLAPLLFNIFFAAVINVASTRFKADKGITDALVHLRKKRGAGGRGEATATEESVLAT---PLWGMLYADDAGVVSQSPEQLRKMMGVIVVVCAAFGLTVSEVKTEIMCLRAKGMPESTATFSVEAAGQVYNQTNEFVYLGGNI 5405 YF PK ++ ++KH + F R+T D + ++ +SDHNLV+ VR P R APNRR R + ++ +L RL D +LR + ++ PP + A ++ V++S AAE+ P + RG GW + E++ A +E A+++LR NS+L +K K K R +A L F++ +VR+LEK++REGDQAGFY+HLK +++EGKR S +K E+G +LRD R+RW +WFH LLN KSP +D + D + QWP +PL ++ E+ +A+R +AN KAVGPD + EL K L+GD R ++V +W+ G VP QWKDA I VL KK D ECGNYRGISLVAHAGK+LLK++A RLS YCER GILPEEQSGFRP+RST DM+F I+RL ELARKK ++ CF+DLTKAYDSVDR LL VL RFGVP +++VIR FH+GM+A VR DD YS WF V QGLRQGC LAPLLFN+F AA+ VA T F D +T ++ + + G+ +A +++++ T LW MLYADDA +VS +PE L KMM +IV V FGL VSE KTEIMC+ KG+ E F+V AAGQ Y QT+ FVYLG I Sbjct: 50 YFRTPKGGVQHTFQSSNKGKEKH-RLDFILMRQT-DRRLVRNASVKRVDFKDSDHNLVHTTVRSPPRVAPNRRTRGNSGSSRIRIDLERLRKDVHLRAVFQDRALNRPPPTALSRPTGETAAELTAVVMSAAAEIAPLARSARGKGGWYTSE-AQHEISEASREIRVAQQQLRGASKNSDLETTLKAKLKAARKKRSSARWRALEKFFEGYVRQLEKKSREGDQAGFYRHLKMIDVEGKRPLTSQNIKDEDGKVLRDPTLTRQRWARWFHKLLNTKSPTIDLHATDRVKQWPTCVPLDDIPSLFEVEEAVRGMANRKAVGPDDLPAELIKLFLDGDRGFLREFHAIVVDVWQTGNVPQQWKDATIKVLFKKGDTMECGNYRGISLVAHAGKVLLKVVATRLSHYCEREGILPEEQSGFRPHRSTLDMLFAIQRLHELARKKSTAVFACFVDLTKAYDSVDRDLLWDVLGRFGVPPKMLAVIRHFHEGMRARVRTDDGQYSEWFDVGQGLRQGCNLAPLLFNLFSAAMRMVAVTEFDKDPKVTADMIKIATRVECTGKRGRSAGKKAMMVTVAEALWDMLYADDAAIVSLTPESLEKMMSIIVRVAGLFGLMVSEPKTEIMCMLPKGLGERP--FAVSAAGQTYKQTDRFVYLGRTI 700
BLAST of mRNA_F-serratus_M_contig964.20966.1 vs. uniprot
Match: A0A6H5LM52_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LM52_9PHAE) HSP 1 Score: 542 bits (1396), Expect = 1.580e-162 Identity = 310/652 (47.55%), Postives = 406/652 (62.27%), Query Frame = -3 Query: 3462 PKVACPIRSKAPTAARDKHVWITF*QSRRTADSSAALMSDAPPLESPESDHNLVYAKVRIPHRSAPNRRKRDTRETPKLA-NLRRLMTDPNLRFQVANAVVDALPPIPDGTCISDIATDMADVMLSTAAELVPRPKRPRGAQGWCAGLGVEAEMNAAWQEREEARRRLRAEPHNSNLRKAVKIAGKILPKVRKAAE---LSCFWD-FVRKLEKRTREGDQAGFYKHLKAMNLEGKRDRRSAYVKYENGVLLRDVEPIRERWVQWFHTLLNAKSPRLDPNMADGLDQWPENMPLGVQSTMQELTDAIRSLANGKAVGPDGVSVELFKTTLNGDPALRRRLFDVIVRIWRGGEVP*QWKDAIIMVLHKKKDRTECGNYRGISLVAHAGKILLKIIARRLSEYCERVGILPEEQSGFRPNRSTTDMMFVIRRLQELARKKRIPLYVCFIDLTKAYDSVDRTLL*TVLARFGVPQIVISVIRQFHDGMQACVRLDDRVYSRWFAVEQGLRQGCVLAPLLFNIFFAAVINVASTRFKADKGITDALVHLRKKRGAGGRGEATATEESVLAT---PLWGMLYADDAGVVSQSPEQLRKMMGVIVVVCAAFGLTVSEVKTEIMCLRAKGMPESTATFSVEAAGQVYNQTNEFVYLGGNI 5393 P P + A+D W T + R AD ++ +SDHNLV VR+P R APNRR R + ++ +L RL D +LR N PP + A ++ ++S AAE P + RG +GW + E++ A +E + A+++LR NS +K K K R A L F++ +VR+LEK++REGDQA FY+HLK +++EGKR S +K E+G +LRD IR+RW +WFH LLN KSP +D + AD + +WP +PL ++ E+ +A+R +AN KAVGPD + EL K L+GD L R ++V +W+ G+VP QWKDA I VL KK D ECGNYRGISLVAHAGK+LLK++A RLS YCER GILPEEQSGFRP+RST DM+F I+RL ELARKK ++ CF+DLTKAYDSVDR LL VL RFGVP +++VIR FH+GM+A VR DD YS WF V QGLRQGC LAPLLFN+F AA+ VA T F D +T ++ + + G+ +A +++++ T LW MLYADDA +VS +PE L KMM +IV V FGL VSE KTEIMC+ KG+ E F+V AAGQ Y QT+ FVYLG I Sbjct: 40 PTETVPTTAGGDVNAKDSF-WTTVDAAIREADRRFMRNVSVKRVDFEDSDHNLVLTTVRLPPRVAPNRRVRGNSGSSRIRIDLERLRKDKHLRDAFQNRASSRPPPTALRRPTGETAAELTATVMSAAAETAPLARCARGQRGWYTSE-AQHEISDASKEIKAAQQQLRGASKNSACEATLKAMLKAARKKRSIARWRALETFFEIYVRQLEKKSREGDQAVFYRHLKMIDVEGKRSFTSQNIKDEDGKVLRDPTFIRQRWARWFHKLLNTKSPTIDLHAADKVKRWPTCVPLDDIPSLLEVEEAVREMANRKAVGPDDLPAELIKLFLDGDQGLLREFHAIVVDVWQTGDVPQQWKDATIKVLFKKGDTMECGNYRGISLVAHAGKVLLKVVATRLSHYCEREGILPEEQSGFRPHRSTLDMLFAIQRLHELARKKSTAVFACFVDLTKAYDSVDRDLLWDVLGRFGVPPKMLAVIRHFHEGMRARVRTDDGQYSEWFDVGQGLRQGCNLAPLLFNLFSAAMRMVAVTEFDKDPKVTADMIKIATRVECTGKRGRSAGKKAMMVTVAEALWDMLYADDAAIVSLTPESLEKMMSIIVRVAGLFGLMVSEPKTEIMCMLPKGLGERP--FAVSAAGQTYKQTDRFVYLGRTI 687
BLAST of mRNA_F-serratus_M_contig964.20966.1 vs. uniprot
Match: A0A6H5KC90_9PHAE (Reverse transcriptase domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC90_9PHAE) HSP 1 Score: 545 bits (1405), Expect = 6.020e-162 Identity = 311/656 (47.41%), Postives = 413/656 (62.96%), Query Frame = -3 Query: 3462 YFAPPKVACPIRSKAPTAARDKHVWITF*QSRRTADSSAALMSDAPPLESPESDHNLVYAKVRIPHRSAPNRRKRDTRETPKLA-NLRRLMTDPNLRFQVANAVVDALPPIPDGTCISDIATDMADVMLSTAAELVPRPKRPRGAQGWCAGLGVEAEMNAAWQEREEARRRLRAEPHNSNLRKAVKIAGKILPKVRKAAE---LSCFWD-FVRKLEKRTREGDQAGFYKHLKAMNLEGKRDRRSAYVKYENGVLLRDVEPIRERWVQWFHTLLNAKSPRLDPNMADGLDQWPENMPLGVQSTMQELTDAIRSLANGKAVGPDGVSVELFKTTLNGDPALRRRLFDVIVRIWRGGEVP*QWKDAIIMVLHKKKDRTECGNYRGISLVAHAGKILLKIIARRLSEYCERVGILPEEQSGFRPNRSTTDMMFVIRRLQELARKKRIPLYVCFIDLTKAYDSVDRTLL*TVLARFGVPQIVISVIRQFHDGMQACVRLDDRVYSRWFAVEQGLRQGCVLAPLLFNIFFAAVINVASTRFKADKGITDALVHLRKKRGAGGRGEATATEESVLAT---PLWGMLYADDAGVVSQSPEQLRKMMGVIVVVCAAFGLTVSEVKTEIMCLRAKGMPESTATFSVEAAGQVYNQTNEFVYLGGNI 5405 YF PK ++ ++KH + F R+T D + ++ +SDHNLV+ VR P R APNRR R + ++ +L RL D +LR + ++ PP + A ++ V++S AAE+ P + RG GW + E++ A +E A+++LR NS+L +K K K R +A L F++ +VR+LEK++REGDQAGFY+HLK +++EGKR S +K E+G +LRD R+RW +WFH LLN KSP +D + D + QWP +PL ++ E+ +A+R +AN KAVGPD + EL K L+GD R ++V +W+ G VP QWKDA I VL KK D ECGNYRGISLVAHAGK+LLK++A RLS YCER GILPEEQSGFRP+RST DM+F I+RL ELARKK ++ CF+DLTKAYDSVDR LL VL RFGVP +++VIR FH+GM+A VR DD YS WF V QGLRQGC LAPLLFN+F AA+ VA T F D +T ++ + + G+ +A +++++ T LW MLYADDA +VS +PE L KMM +IV V FGL VSE KTEIMC+ KG+ E F+V AAGQ Y QT+ FVYLG I Sbjct: 188 YFRTPKGGVQHTFQSSNKGKEKH-RLDFILMRQT-DRRLVRNASVKRVDFKDSDHNLVHTTVRSPPRVAPNRRTRGNSGSSRIRIDLERLRKDVHLRAVFQDRALNRPPPTALSRPTGETAAELTAVVMSAAAEIAPLARSARGKGGWYTSE-AQHEISEASREIRVAQQQLRGASKNSDLETTLKAKLKAARKKRSSARWRALEKFFEGYVRQLEKKSREGDQAGFYRHLKMIDVEGKRPLTSQNIKDEDGKVLRDPTLTRQRWARWFHKLLNTKSPTIDLHATDRVKQWPTCVPLDDIPSLFEVEEAVRGMANRKAVGPDDLPAELIKLFLDGDRGFLREFHAIVVDVWQTGNVPQQWKDATIKVLFKKGDTMECGNYRGISLVAHAGKVLLKVVATRLSHYCEREGILPEEQSGFRPHRSTLDMLFAIQRLHELARKKSTAVFACFVDLTKAYDSVDRDLLWDVLERFGVPPKMLAVIRHFHEGMRARVRTDDGQYSEWFDVGQGLRQGCNLAPLLFNLFSAAMRMVAVTEFDKDPKVTADMIKIATRVECTGKRGRSAGKKAMMVTVAEALWDMLYADDAAIVSLTPESLEKMMSIIVRVAGLFGLMVSEPKTEIMCMLPKGLGERP--FAVSAAGQTYKQTDRFVYLGRTI 838
BLAST of mRNA_F-serratus_M_contig964.20966.1 vs. uniprot
Match: A0A6H5JQH5_9PHAE (Reverse transcriptase domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQH5_9PHAE) HSP 1 Score: 546 bits (1406), Expect = 8.050e-161 Identity = 311/656 (47.41%), Postives = 413/656 (62.96%), Query Frame = -3 Query: 3462 YFAPPKVACPIRSKAPTAARDKHVWITF*QSRRTADSSAALMSDAPPLESPESDHNLVYAKVRIPHRSAPNRRKRDTRETPKLA-NLRRLMTDPNLRFQVANAVVDALPPIPDGTCISDIATDMADVMLSTAAELVPRPKRPRGAQGWCAGLGVEAEMNAAWQEREEARRRLRAEPHNSNLRKAVKIAGKILPKVRKAAE---LSCFWD-FVRKLEKRTREGDQAGFYKHLKAMNLEGKRDRRSAYVKYENGVLLRDVEPIRERWVQWFHTLLNAKSPRLDPNMADGLDQWPENMPLGVQSTMQELTDAIRSLANGKAVGPDGVSVELFKTTLNGDPALRRRLFDVIVRIWRGGEVP*QWKDAIIMVLHKKKDRTECGNYRGISLVAHAGKILLKIIARRLSEYCERVGILPEEQSGFRPNRSTTDMMFVIRRLQELARKKRIPLYVCFIDLTKAYDSVDRTLL*TVLARFGVPQIVISVIRQFHDGMQACVRLDDRVYSRWFAVEQGLRQGCVLAPLLFNIFFAAVINVASTRFKADKGITDALVHLRKKRGAGGRGEATATEESVLAT---PLWGMLYADDAGVVSQSPEQLRKMMGVIVVVCAAFGLTVSEVKTEIMCLRAKGMPESTATFSVEAAGQVYNQTNEFVYLGGNI 5405 YF PK ++ ++KH + F R+T D + ++ +SDHNLV+ VR P R APNRR R + ++ +L RL D +LR + ++ PP + A ++ V++S AAE+ P + RG GW + E++ A +E A+++LR NS+L +K K K R +A L F++ +VR+LEK++REGDQAGFY+HLK +++EGKR S +K E+G +LRD R+RW +WFH LLN KSP +D + D + QWP +PL ++ E+ +A+R +AN KAVGPD + EL K L+GD R ++V +W+ G VP QWKDA I VL KK D ECGNYRGISLVAHAGK+LLK++A RLS YCER GILPEEQSGFRP+RST DM+F I+RL ELARKK ++ CF+DLTKAYDSVDR LL VL RFGVP +++VIR FH+GM+A VR DD YS WF V QGLRQGC LAPLLFN+F AA+ VA T F D +T ++ + + G+ +A +++++ T LW MLYADDA +VS +PE L KMM +IV V FGL VSE KTEIMC+ KG+ E F+V AAGQ Y QT+ FVYLG I Sbjct: 300 YFRTPKGGVQHTFQSSNKGKEKH-RLDFILMRQT-DRRLVRNASVKRVDFKDSDHNLVHTTVRSPPRVAPNRRTRGNSGSSRIRIDLERLRKDVHLRAVFQDRALNRPPPTALSRPTGETAAELTAVVMSAAAEIAPLARSARGKGGWYTSE-AQHEISEASREIRVAQQQLRGASKNSDLETTLKAKLKAARKKRSSARWRALEKFFEGYVRQLEKKSREGDQAGFYRHLKMIDVEGKRPLTSQNIKDEDGKVLRDPTLTRQRWARWFHKLLNTKSPTIDLHATDRVKQWPTCVPLDDIPSLFEVEEAVRGMANRKAVGPDDLPAELIKLFLDGDRGFLREFHAIVVDVWQTGNVPQQWKDATIKVLFKKGDTMECGNYRGISLVAHAGKVLLKVVATRLSHYCEREGILPEEQSGFRPHRSTLDMLFAIQRLHELARKKSTAVFACFVDLTKAYDSVDRDLLWDVLGRFGVPPKMLAVIRHFHEGMRARVRTDDGQYSEWFDVGQGLRQGCNLAPLLFNLFSAAMRMVAVTEFDKDPKVTADMIKIATRVECTGKRGRSAGKKAMMVTVAEALWDMLYADDAAIVSLTPESLEKMMSIIVRVAGLFGLMVSEPKTEIMCMLPKGLGERP--FAVSAAGQTYKQTDRFVYLGRTI 950
BLAST of mRNA_F-serratus_M_contig964.20966.1 vs. uniprot
Match: A0A6H5KDI8_9PHAE (Reverse transcriptase domain-containing protein n=5 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDI8_9PHAE) HSP 1 Score: 547 bits (1409), Expect = 5.670e-160 Identity = 311/658 (47.26%), Postives = 416/658 (63.22%), Query Frame = -3 Query: 3462 YFAPPKVACPIRSKAPTAARDKHV--WITF*QSRRTADSSAALMSDAPPLESPESDHNLVYAKVRIPHRSAPNRRKRDTRETPKLA-NLRRLMTDPNLRFQVANAVVDALPPIPDGTCISDIATDMADVMLSTAAELVPRPKRPRGAQGWCAGLGVEAEMNAAWQEREEARRRLRAEPHNSNLRKAVKIAGKILPKVRKAAE---LSCFWD-FVRKLEKRTREGDQAGFYKHLKAMNLEGKRDRRSAYVKYENGVLLRDVEPIRERWVQWFHTLLNAKSPRLDPNMADGLDQWPENMPLGVQSTMQELTDAIRSLANGKAVGPDGVSVELFKTTLNGDPALRRRLFDVIVRIWRGGEVP*QWKDAIIMVLHKKKDRTECGNYRGISLVAHAGKILLKIIARRLSEYCERVGILPEEQSGFRPNRSTTDMMFVIRRLQELARKKRIPLYVCFIDLTKAYDSVDRTLL*TVLARFGVPQIVISVIRQFHDGMQACVRLDDRVYSRWFAVEQGLRQGCVLAPLLFNIFFAAVINVASTRFKADKGITDALVHLRKKRGAGGRGEATATEESVLAT---PLWGMLYADDAGVVSQSPEQLRKMMGVIVVVCAAFGLTVSEVKTEIMCLRAKGMPESTATFSVEAAGQVYNQTNEFVYLGGNI 5405 YF PK ++ ++KH +I Q+ R + +A++ ++ +SDHNLV+ VR P R APNRR R + ++ +L RL D +LR + ++ PP + A ++ V++S AAE+ P + RG GW + E++ A +E A+++LR NS+L +K K K R +A L F++ +VR+LEK++REGDQAGFY+HLK +++EGKR S +K E+G +LRD R+RW +WFH LLN KSP +D + D + QWP +PL ++ E+ +A+R +AN KAVGPD + EL K L+GD R ++V +W+ G VP QWKDA I VL KK D ECGNYRGISLVAHAGK+LLK++A RLS YCER GILPEEQSGFRP+RST DM+F I+RL ELARKK ++ CF+DLTKAYDSVDR LL VL RFGVP +++VIR FH+GM+A VR DD YS WF V QGLRQGC LAPLLFN+F AA+ VA T F D +T ++ + + G+ +A +++++ T LW MLYADDA +VS +PE L KMM +IV V FGL VSE KTEIMC+ KG+ E F+V AAGQ Y QT+ FVYLG I Sbjct: 421 YFRTPKGGVQHTFQSSNKGKEKHRLDFILMRQTDRRLERNASVKR----VDFKDSDHNLVHTTVRSPPRVAPNRRTRGNSGSSRIRIDLERLRKDVHLRAVFQDRALNRPPPTALSRPTGETAAELTAVVMSAAAEIAPLARSARGKGGWYTSE-AQHEISEASREIRVAQQQLRGASKNSDLETTLKAKLKAARKKRSSARWRALEKFFEGYVRQLEKKSREGDQAGFYRHLKMIDVEGKRPLTSQNIKDEDGKVLRDPTLTRQRWARWFHKLLNTKSPTIDLHATDRVKQWPTCVPLDDIPSLFEVEEAVRGMANRKAVGPDDLPAELIKLFLDGDRGFLREFHAIVVDVWQTGNVPQQWKDATIKVLFKKGDTMECGNYRGISLVAHAGKVLLKVVATRLSHYCEREGILPEEQSGFRPHRSTLDMLFAIQRLHELARKKSTAVFACFVDLTKAYDSVDRDLLWDVLGRFGVPPKMLAVIRHFHEGMRARVRTDDGQYSEWFDVGQGLRQGCNLAPLLFNLFSAAMRMVAVTEFDKDPKVTADMIKIATRVECTGKRGRSAGKKAMMVTVAEALWDMLYADDAAIVSLTPESLEKMMSIIVRVAGLFGLMVSEPKTEIMCMLPKGLGERP--FAVSAAGQTYKQTDRFVYLGRTI 1071
BLAST of mRNA_F-serratus_M_contig964.20966.1 vs. uniprot
Match: A0A6H5KKU2_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKU2_9PHAE) HSP 1 Score: 512 bits (1318), Expect = 6.800e-156 Identity = 281/529 (53.12%), Postives = 350/529 (66.16%), Query Frame = -3 Query: 3459 LSTAAELVPRPKRPRGAQGWCAGLGVEAEMNAAWQEREEARRRLRAEPHNSNLRKAVKIAGKILPKVRKAAELSC----FWDFVRKLEKRTREGDQAGFYKHLKAMNLEGKRDRRSAYVKYENGVLLRDVEPIRERWVQWFHTLLNAKSPRLDPNMADGLDQWPENMPLGVQSTMQELTDAIRSLANGKAVGPDGVSVELFKTTLNGDPALRRRLFDVIVRIWRGGEVP*QWKDAIIMVLHKKKDRTECGNYRGISLVAHAGKILLKIIARRLSEYCERVGILPEEQSGFRPNRSTTDMMFVIRRLQELARKKRIPLYVCFIDLTKAYDSVDRTLL*TVLARFGVPQIVISVIRQFHDGMQACVRLDDRVYSRWFAVEQGLRQGCVLAPLLFNIFFAAVINVASTRFKADKGITDALVHLRKK---RGAGGRGEATATEESVLATPLWGMLYADDAGVVSQSPEQLRKMMGVIVVVCAAFGLTVSEVKTEIMCLRAKGMPESTATFSVEAAGQVYNQTNEFVYLGGNIT 5024 +S AAE P + RG +GW + E + A +E + A+++LR NS +K K K R A S F +VR+LEK++REGDQAGFY+HLK +++EGKR S +K E+G +LRD IR+RW +WFH LLN KSP +D + AD + WP +PL ++ E+ +A+R +AN KAVGPD + EL K L+GD L R ++V +W+ G+VP QWKDA I VL KK D ECGNYRGISLVAHAGK+LLK++A RLS YCER GILPEEQSGFRP+RST DM+F I+RL ELARKK ++ CF+DLTKAYDSVDR LL VL RFGVP +++VIR FH+GM+A VR DD YS WF V QGLRQGC LAPLLFN+FFAA++ VA F D +T +V + + G GR T A LW MLYADDA +VS+SPE L KMM VIV V FGL VSE KTEIMC+ KG+ E F+V AAGQ Y QT+ FVYLG I+ Sbjct: 1 MSAAAETAPLARCARGQRGWYTSE-AQHENSEASKEIKAAQQQLRGASKNSACEATLKAMLKAARKKRSIARWSALETFFEGYVRQLEKKSREGDQAGFYRHLKMIDVEGKRSFTSQNIKDEDGKVLRDPTFIRQRWTRWFHKLLNTKSPTIDLHAADKVKWWPTCVPLDDIPSLLEVEEAVREMANRKAVGPDDLPAELIKLFLDGDQGLLREFHAIVVDVWQTGDVPQQWKDATIKVLFKKGDTMECGNYRGISLVAHAGKVLLKVVATRLSHYCEREGILPEEQSGFRPHRSTLDMLFAIQRLHELARKKSTAVFACFVDLTKAYDSVDRDLLWDVLRRFGVPPKMLAVIRHFHEGMRARVRTDDGQYSEWFDVGQGLRQGCNLAPLLFNLFFAAMLMVAVAEFDKDPKVTADMVKIGTQVEYTGKKGRSAGRKTTVVTDAEALWAMLYADDAAIVSRSPESLEKMMSVIVRVAGLFGLMVSEPKTEIMCMLPKGIEEHP--FTVSAAGQTYKQTDRFVYLGRTIS 526
BLAST of mRNA_F-serratus_M_contig964.20966.1 vs. uniprot
Match: A0A6H5K0M7_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0M7_9PHAE) HSP 1 Score: 503 bits (1294), Expect = 1.100e-151 Identity = 286/591 (48.39%), Postives = 372/591 (62.94%), Query Frame = -3 Query: 3459 RSAPNRRKRDTRETPKLA-NLRRLMTDPNLRFQVANAVVDALPPIPDGTCISDIATDMADVMLSTAAELVPRPKRPRGAQGWCAGLGVEAEMNAAWQEREEARRRLRAEPHNS----NLRKAVKIAGKILPKVRKAAELSCFWDFVRKLEKRTREGDQAGFYKHLKAMNLEGKRDRRSAYVKYENGVLLRDVEPIRERWVQWFHTLLNAKSPRLDPNMADGLDQWPENMPLGVQSTMQELTDAIRSLANGKAVGPDGVSVELFKTTLNGDPALRRRLFDVIVRIWRGGEVP*QWKDAIIMVLHKKKDRTECGNYRGISLVAHAGKILLKIIARRLSEYCERVGILPEEQSGFRPNRSTTDMMFVIRRLQELARKKRIPLYVCFIDLTKAYDSVDRTLL*TVLARFGVPQIVISVIRQFHDGMQACVRLDDRVYSRWFAVEQGLRQGCVLAPLLFNIFFAAVINVASTRFKADKGITDALVHLRKKRGAGGRGEATATEESVLAT---PLWGMLYADDAGVVSQSPEQLRKMMGVIVVVCAAFGLTVSEVKTEIMCLRAKGMPESTATFSVEAAGQVYNQTNEFVYLGGNIT 5207 R APNRR R + ++ +L RL D +LR N P + A ++ ++S AAE P + RG +GW + E++ A +LR NS L+ +K A K R A + F +VR+LEK++REGDQAGFY+HLK +++EG R S ++ E+G +LRD IR+RW +WFH LLN KSP +D + AD + +WP +PL ++ E+ +A+R +AN KAVGPD + EL K L+GD L R ++V +W+ G+VP QW DA I VL KK D ECGNYRGISLVAHAGK+LLK++A RLS YCER GILPEEQSGFRP+RST DM+F I+RL ELARKK ++ CF+DLTKAYDSVDR LL VL RFGVP +++VIR FH+GM+A VR DD YS WF V QGLRQGC LAPLLFN+F AA+ VA T F D +T ++ + + G+ +A +++++ T LW MLYADDA +VS +PE L KMM VIV V FGL VSE KTE MC+ KG+ E F+V AAGQ Y QT+ VYLG I+ Sbjct: 6 RVAPNRRVRGNSGSSRIRIDLERLRKDKHLRGAFQNRAPSRPPLTALRRPTGETAAELTATVMSAAAETAPLARCARGQRGWYTSE-AQHEISEASXXXXXXXXQLRGASKNSAFEATLKAMLKAARKKCSTARWRALETFFEGYVRQLEKKSREGDQAGFYRHLKMIDVEGNRSFTSQDIQDEDGKVLRDPTFIRQRWARWFHKLLNTKSPTIDLHTADKVKRWPTCVPLDDIPSLLEVEEAVREMANRKAVGPDDLPAELIKLFLDGDQGLLREFHAIVVDVWQTGDVPQQWNDATIKVLFKKGDTMECGNYRGISLVAHAGKVLLKVVATRLSHYCEREGILPEEQSGFRPHRSTLDMLFAIQRLHELARKKSTAVFACFVDLTKAYDSVDRDLLWDVLRRFGVPPKMLAVIRHFHEGMRARVRTDDGQYSEWFDVGQGLRQGCNLAPLLFNLFSAAMRMVAVTEFDKDPKVTADMIKIATRVECTGKRGRSAGKKAMMVTVAEALWDMLYADDAAIVSLTPESLEKMMSVIVRVAGLFGLMVSEPKTETMCMLPKGIEERP--FTVSAAGQTYKQTDRLVYLGRTIS 593
BLAST of mRNA_F-serratus_M_contig964.20966.1 vs. uniprot
Match: A0A6H5JM98_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JM98_9PHAE) HSP 1 Score: 509 bits (1312), Expect = 2.080e-149 Identity = 294/606 (48.51%), Postives = 372/606 (61.39%), Query Frame = -3 Query: 3459 ESDHNLVYAKVRIPHRSAPNRRKRDTRETPKLA-NLRRLMTDPNLRFQVANAVVDALPPIPDGTCISDIATDMADVMLSTAAELVPRPKRPRGAQGWCAGLGVEAEMNAAWQEREEARRRLRAEPHNSNLRKAVKIAGKILPKVRKAAE---LSCFWD-FVRKLEKRTREGDQAGFYKHLKAMNLEGKRDRRSAYVKYENGVLLRDVEPIRERWVQWFHTLLNAKSPRLDPNMADGLDQWPENMPLGVQSTMQELTDAIRSLANGKAVGPDGVSVELFKTTLNGDPALRRRLFDVIVRIWRGGEVP*QWKDAIIMVLHKKKDRTECGNYRGISLVAHAGKILLKIIARRLSEYCERVGILPEEQSGFRPNRSTTDMMFVIRRLQELARKKRIPLYVCFIDLTKAYDSVDRTLL*TVLARFGVPQIVISVIRQFHDGMQACVRLDDRVYSRWFAVEQGLRQGCVLAPLLFNIFFAAVINVASTRFKADKGITDALVHLRKK---RGAGGRGEATATEESVLATPLWGMLYADDAGVVSQSPEQLRKMMGVIVVVCAAFGLTVSEVKTEIMCLRAKGMPESTATFSVEAAGQVYNQTNEFVYLGGNIT 5252 +SDHNLV VR+P R APNRR R + ++ +L RL D +LR N PP + A ++ ++S AAE + RG +GW + E++ A + +++LR NS +K K K R A L F + +VRKLEK+ RE DQAGFY+HLK + ++G +LR+ IR+RW +WFH LLN KSP +D + AD + +WP +PL ++ E+ +A+R + N KAVGPD + EL K L+ D L R ++V +W+ G+VP QWKDA I VL KK D ECGNYRGISLVAHAGK+LLK++A RLS YCER GILPEEQSGFRP+RST DM+F I+RL ELARKK ++ CF+DLTKAYDSVDR LL VL RFGVP ++ VI FH+GM+A VR DD YS WF V QGLRQGC LAPLLFN+FFAA++ VA F D +T +V + + G GR T A LW MLYADDA +VS+SPE L KMM VIV V FGL VSE KTEIMC+ KG+ ES F+V AAGQ Y QT+ FVYLG I+ Sbjct: 294 DSDHNLVLTTVRLPPRVAPNRRARGNSGSSRIRIDLERLRKDKHLRVAFQNRASSRPPPTALRRPTGETAAELTATVMSAAAETARLARCARGQRGWYTSE-AQHEISEASKXXXAXQQQLRGASKNSAFEATLKAMLKAARKKRSIATWRALETFLEGYVRKLEKKCREVDQAGFYRHLKMI---------------DDGKVLRNPTFIRQRWARWFHKLLNTKSPTIDLHAADKVKRWPTCVPLDDIPSLLEVEEAVREMTNRKAVGPDDLQAELIKLLLDADQGLLREFHAIVVDVWQTGDVPQQWKDATIKVLFKKGDTMECGNYRGISLVAHAGKVLLKVVATRLSHYCEREGILPEEQSGFRPHRSTLDMLFAIQRLHELARKKSTAVFACFVDLTKAYDSVDRDLLWDVLGRFGVPPKMLVVIGHFHEGMRARVRPDDGQYSEWFDVGQGLRQGCNLAPLLFNLFFAAMLMVAVAEFDKDPKVTADMVKIGTQVEYTGKKGRSARRKTTVVTDAEALWAMLYADDAAIVSRSPESLEKMMSVIVRVAGLFGLMVSEPKTEIMCMLPKGIEESP--FTVSAAGQTYKQTDRFVYLGRTIS 881
BLAST of mRNA_F-serratus_M_contig964.20966.1 vs. uniprot
Match: A0A6H5L806_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L806_9PHAE) HSP 1 Score: 477 bits (1227), Expect = 2.880e-144 Identity = 247/450 (54.89%), Postives = 314/450 (69.78%), Query Frame = -3 Query: 3459 FWDFVRKLEKRTREGDQAGFYKHLKAMNLEGKRDRRSAYVKYENGVLLRDVEPIRERWVQWFHTLLNAKSPRLDPNMADGLDQWPENMPLGVQSTMQELTDAIRSLANGKAVGPDGVSVELFKTTLNGDPALRRRLFDVIVRIWRGGEVP*QWKDAIIMVLHKKKDRTECGNYRGISLVAHAGKILLKIIARRLSEYCERVGILPEEQSGFRPNRSTTDMMFVIRRLQELARKKRIPLYVCFIDLTKAYDSVDRTLL*TVLARFGVPQIVISVIRQFHDGMQACVRLDDRVYSRWFAVEQGLRQGCVLAPLLFNIFFAAVINVASTRFKADKGITDALVHLRKK-RGAGGRGEATATEESVL--ATPLWGMLYADDAGVVSQSPEQLRKMMGVIVVVCAAFGLTVSEVKTEIMCLRAKGMPESTATFSVEAAGQVYNQTNEFVYLGGNIT 4799 F FVR+LEK++RE DQAGFY+HL+ +++EGKR S +K E+G +LRD IR+RW +WFH LLN KSP +D + AD + +WP +PL ++ E+ +A+R N KAVGPD + EL K L+ L R ++V +W+ G+VP QWKDA I VL KK D ECGNYRGISLVAHAGK+LLK++A RLS YCER GILPEEQSGFRP+RST DM+F I+RL ELARKK ++ CF+DLTKAYDSVDR LL VL RFGVP +++VIR FH+GM+A VR DD YS WF V QGLRQGC LAPLLFN+FFA ++ VA F D +T +V + + G +G++ + +V+ A LW ML+ADDA +VS+SPE L MM +IV V FGL V E +TEIMC+ KG+ E F+V AAGQ Y QT+ FVYLG I+ Sbjct: 21 FEGFVRQLEKKSREADQAGFYRHLQMIDVEGKRSFTSQNIKDEDGKVLRDPTFIRQRWARWFHKLLNTKSPTIDLHAADKVKRWPTCVPLDDIPSLLEVEEAVRERDNRKAVGPDDLPAELIKLFLDEGQGLLREFHAIVVNVWQTGDVPQQWKDATIKVLFKKGDTMECGNYRGISLVAHAGKVLLKVVATRLSHYCEREGILPEEQSGFRPHRSTLDMLFAIQRLHELARKKSTAVFACFVDLTKAYDSVDRDLLWDVLRRFGVPPKMLAVIRHFHEGMRARVRTDDGQYSEWFDVGQGLRQGCNLAPLLFNLFFAVILMVAVAEFDRDPKVTADMVKIGTQVEYTGKKGKSAGKKPTVVTDAEALWAMLHADDAAIVSRSPESLETMMSIIVRVAGLFGLMVLEPQTEIMCMLPKGIEERP--FTVSAAGQTYKQTDRFVYLGRTIS 468
BLAST of mRNA_F-serratus_M_contig964.20966.1 vs. uniprot
Match: A0A6H5L020_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L020_9PHAE) HSP 1 Score: 479 bits (1232), Expect = 9.420e-143 Identity = 283/596 (47.48%), Postives = 364/596 (61.07%), Query Frame = -3 Query: 3459 VRIPHRSAPNRRKRDTRETPKLA-NLRRLMTDPNLRFQVANAVVDALPPIPDGTCISDIATDMADVMLSTAAELVPRPKRPRGAQGWCAGLGVEAEMNAAWQEREEARRRLRAEPHNSNLRKAVKIAGKILPKVRKAAE---LSCFWD-FVRKLEKRTREGDQAGFYKHLKAMNLEGKRDRRSAYVKYENGVLLRDVEPIRERWVQWFHTLLNAKSPRLDPNMADGLDQWPENMPLGVQSTMQELTDAIRSLANGKAVGPDGVSVELFKTTLNGDPALRRRLFDVIVRIWRGGEVP*QWKDAIIMVLHKKKDRTECGNYRGISLVAHAGKILLKIIARRLSEYCERVGILPEEQSGFRPNRSTTDMMFVIRRLQELARKKRIPLYVCFIDLTKAYDSVDRTLL*TVLARFGVPQIVISVIRQFHDGMQACVRLDDRVYSRWFAVEQGLRQGCVLAPLLFNIFFAAVINVASTRFKADKGITDALVHLRKK---RGAGGRGEATATEESVLATPLWGMLYADDAGVVSQSPEQLRKMMGVIVVVCAAFGLTVSEVKTEIMCLRAKGMPESTATFSVEAAGQVYNQTNEFVYLGGNIT 5222 VR+P R APNR R + ++ +L+R+ D +LR N PP + A ++ ++S AAE P + RG +G + GV+ E++ A + A+++LR NS +K K K R A L F++ +VR+LEK++REGDQAGFY+HLK +++EGKR S +K E+G +LRD IR+RW +WFH LLN KSP +D + AD + +WP +PL ++ E+ +A+R +AN KAVGPD + EL K L+GD VL K D ECGNYRGISLVAHAGK+LLK++A RLS YCER GILPEEQSGFRP+RST DM+F I+RL ELARKK ++ CF+DLTKAYDSVDR LL VL RFGVP +++VIR FH+GM+A VR + YS WF V QGLRQGC LAPLLFN+FFAA++ VA F D +T +V + + G GR T A LW MLYADDA +VS+SPE L KMM VIV V FGL VSE KTEIMC+ KG+ E F+V AAGQ Y QT+ FVYLG I+ Sbjct: 3 VRLPPRVAPNRPVRGNSGSSRIPIDLKRITKDKDLRVASQNRASSRPPPTALRRPTGETAAELTATVMSAAAETAPLARCARGQRGGYSS-GVQHEISEASKAIRAAQQQLRVASKNSAFEATLKAMLKAARKKRSIARWRALETFFEGYVRQLEKKSREGDQAGFYRHLKMIDVEGKRSFTSQNIKDEDGKVLRDPTFIRQRWARWFHKLLNTKSPTIDLHAADKVKRWPTCVPLDDIPSLLEVEEAVREMANRKAVGPDDLPTELTKPFLDGD-----------------------------QVLFMKGDTMECGNYRGISLVAHAGKVLLKVVATRLSHYCEREGILPEEQSGFRPHRSTLDMLFAIQRLHELARKKSTAVFACFVDLTKAYDSVDRDLLWDVLRRFGVPPKMLAVIRHFHEGMRAHVRPNGGQYSEWFDVSQGLRQGCNLAPLLFNLFFAAILMVAVAEFDKDPKVTADMVKIGTQVEYTGKKGRSAGRKTTVVTDAEALWAMLYADDAAIVSRSPESLEKMMSVIVRVAGLFGLMVSEPKTEIMCMLPKGIEEHP--FTVSAAGQTYKQTDRFVYLGRTIS 566 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig964.20966.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig964.20966.1 >prot_F-serratus_M_contig964.20966.1 ID=prot_F-serratus_M_contig964.20966.1|Name=mRNA_F-serratus_M_contig964.20966.1|organism=Fucus serratus male|type=polypeptide|length=1015bp MNTERLDIHKLLELETELEELPSSIERSAKVNLLKYLQVDKVREYERVSTback to top mRNA from alignment at F-serratus_M_contig964:254678..305412- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig964.20966.1 ID=mRNA_F-serratus_M_contig964.20966.1|Name=mRNA_F-serratus_M_contig964.20966.1|organism=Fucus serratus male|type=mRNA|length=50735bp|location=Sequence derived from alignment at F-serratus_M_contig964:254678..305412- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig964:254678..305412- >mRNA_F-serratus_M_contig964.20966.1 ID=mRNA_F-serratus_M_contig964.20966.1|Name=mRNA_F-serratus_M_contig964.20966.1|organism=Fucus serratus male|type=CDS|length=6090bp|location=Sequence derived from alignment at F-serratus_M_contig964:254678..305412- (Fucus serratus male)back to top |