mRNA_F-serratus_M_contig961.20950.1 (mRNA) Fucus serratus male
Overview
Homology
BLAST of mRNA_F-serratus_M_contig961.20950.1 vs. uniprot
Match: D7FLT1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FLT1_ECTSI) HSP 1 Score: 257 bits (657), Expect = 5.500e-82 Identity = 129/181 (71.27%), Postives = 152/181 (83.98%), Query Frame = 1 Query: 1 VTVPTVGRFQAEGNAYLTTERIVFCAKGPHRKQKQNGMLFKGFDIPLDMLSGEKFDQPILFGANNLSGIVQTNVAYAGNRSGEVAHGA-AMATPVINSNWRLSFRNGGFGTFVRTFYTALHRRRQADPAVTAVSFQGSDAEWAAMQATEVIQAVPIDPTDGTVLLTATPVQASAPMMPEGE 540 +TVPTVGRF+ G+A+LTT+R+VFCA+ PH Q NGMLFKGFDIPL +LSGEKF+QPILFGANNLSG+V+TNVAYAG+ +G A G A ATPVINS+WRLSFRNGGFGTF+ FY+AL RRR DP+VTAV+F GS+ EWA++QATEV QAV +DPTDGTVLLTA PV ASAP P G+ Sbjct: 47 LTVPTVGRFRTTGDAFLTTDRVVFCARKPHGSQ--NGMLFKGFDIPLQVLSGEKFEQPILFGANNLSGVVETNVAYAGSTTGATAPGFHATATPVINSSWRLSFRNGGFGTFLHAFYSALQRRRSVDPSVTAVTFAGSEDEWASLQATEVAQAVALDPTDGTVLLTAAPVAASAPPRPYGD 225
BLAST of mRNA_F-serratus_M_contig961.20950.1 vs. uniprot
Match: A0A067BUS7_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067BUS7_SAPPC) HSP 1 Score: 85.1 bits (209), Expect = 4.160e-16 Identity = 56/163 (34.36%), Postives = 86/163 (52.76%), Query Frame = 1 Query: 22 RFQAEGNAYLTTERIVFCAKGPHRKQKQNGMLFKGFDIPLDMLSGEKFDQPILFGANNLSGIVQTNVAYAGNRSGEVAHGAAMATPVINSNWRLSFRNGGFGTFVRTFYTALHRRRQADPAVTAVSFQGSDAEWAAMQATEVIQAVPIDPTDGTVLLTATPVQ 510 +F+A G Y+TT+R+VFCA + Q+G F+ F+IPLD ++ +KF+QP +FG+ N+SG +V G G+VA TP+ WR+SF NGG GTF+ F + ++ A A + + A +DP D TV+ + PV+ Sbjct: 41 KFKATGRIYITTQRLVFCAD---KAATQHGRFFQAFEIPLDNIADDKFNQP-MFGSCNISG----DVFPVGTDEGDVA------TPI---EWRVSFPNGGTGTFLPIFLRLMEHKKHAGLVDEAFAEKQRKAY--------------VDPNDPTVIYVSQPVR 172
BLAST of mRNA_F-serratus_M_contig961.20950.1 vs. uniprot
Match: A0A6G0XH32_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XH32_9STRA) HSP 1 Score: 83.2 bits (204), Expect = 2.190e-15 Identity = 55/168 (32.74%), Postives = 88/168 (52.38%), Query Frame = 1 Query: 22 RFQAEGNAYLTTERIVFCA-KGPHRKQKQNGMLFKGFDIPLDMLSGEKFDQPILFGANNLSG-IVQTNVAYAGNRSGEVAHGAAMATPVINSNWRLSFRNGGFGTFVRTFYTALHRRRQADPAVTAVSFQGSDAEWAAMQATEVIQAVPIDPTDGTVLLTATPVQASA 519 +F+ G Y+TT+R+VFCA KG H Q+ + F+ F+IPLD ++ +KF+QPI FGA N+SG +V N A G A+P+ W+++F NGG GTF+ F + ++++A D + Q + +DP D +++ PV+ A Sbjct: 41 KFKGNGRIYITTQRLVFCADKGSH----QHDIFFEAFEIPLDNITADKFNQPI-FGACNISGNVVPVNQAADGG-----------ASPI---QWKVAFNNGGTGTFLAVFLKLIEQKKKAGEV---------DETFVQKQQQKAF----VDPNDPSIIYVTQPVRPRA 176
BLAST of mRNA_F-serratus_M_contig961.20950.1 vs. uniprot
Match: A0A067C3R3_SAPPC (Uncharacterized protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067C3R3_SAPPC) HSP 1 Score: 83.6 bits (205), Expect = 1.340e-14 Identity = 55/161 (34.16%), Postives = 84/161 (52.17%), Query Frame = 1 Query: 22 RFQAEGNAYLTTERIVFCAKGPHRKQKQNGMLFKGFDIPLDMLSGEKFDQPILFGANNLSGIVQTNVAYAGNRSGEVAHGAAMATPVINSNWRLSFRNGGFGTFVRTFYTALHRRRQADPAVTAVSFQGSDAEWAAMQATEVIQAVPIDPTDGTVLLTATP 504 +F+A G Y+TT+R+VFCA + Q+G F+ F+IPLD ++ +KF+QP +FG+ N+SG +V G G+VA TP+ WR+SF NGG GTF+ F + ++ A A + + A +DP D TV+ + P Sbjct: 41 KFKASGRIYITTQRLVFCAD---KAATQHGRFFQAFEIPLDNIADDKFNQP-MFGSCNISG----DVFPVGTDEGDVA------TPI---EWRVSFPNGGTGTFLPIFLRLMEHKKHAGLVDEAFAEKQRKAY--------------VDPNDPTVIYVSQP 170
BLAST of mRNA_F-serratus_M_contig961.20950.1 vs. uniprot
Match: W4GK22_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GK22_9STRA) HSP 1 Score: 80.9 bits (198), Expect = 1.580e-14 Identity = 57/174 (32.76%), Postives = 87/174 (50.00%), Query Frame = 1 Query: 4 TVPTVGRFQAEGNAYLTTERIVFCAKGPHRKQKQNGMLFKGFDIPLDMLSGEKFDQPILFGANNLSGIV-----QTNVAYAGNRSGEVAHGAAMATPVINSNWRLSFRNGGFGTFVRTFYTALHRRRQADPAVTAVSFQGSDAEWAAMQATEVIQAVPIDPTDGTVLLTATPVQ 510 T + +F+A G Y+TT+R+VFCA + Q+ F+ F+IPLD + +KF+QPI FGA N+SG V QTN TP+ +W++SF NGG GTF+ F + ++++ D DA + A Q + +DP D +V+ PV+ Sbjct: 36 TTASGSKFKANGRIYITTQRLVFCAD---KGTTQHDTFFEAFEIPLDNVRRDKFNQPI-FGACNISGDVFPATDQTNYDDV--------------TPI---HWKVSFNNGGTGTFLTVFLKLMEQKKKGD----------IDASFVAKQQQKAF----VDPNDPSVIYVTQPVR 174
BLAST of mRNA_F-serratus_M_contig961.20950.1 vs. uniprot
Match: A0A485KAD1_9STRA (Aste57867_3395 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KAD1_9STRA) HSP 1 Score: 80.1 bits (196), Expect = 2.050e-14 Identity = 55/166 (33.13%), Postives = 87/166 (52.41%), Query Frame = 1 Query: 22 RFQAEGNAYLTTERIVFCAKGPHRKQKQNGMLFKGFDIPLDMLSGEKFDQPILFGANNLSGIVQTNVAYAGNRSGEVAHGAAMATPVINSNWRLSFRNGGFGTFVRTFYTALHRRRQADPAVTAVSFQGSDAEWAAMQATEVIQAVPIDPTDGTVLLTATPVQASA 519 +F+A G Y+T++R+VFCA + QN M F+ F+IPLD +S +KF+QPI FGA N+SG V +++ +V TP+ W++SF NGG GTF+ F + ++++ D E+ Q Q +DP D +++ PV+ A Sbjct: 27 KFKANGRMYITSQRLVFCAD---KGSTQNDMFFEAFEIPLDNVSRDKFNQPI-FGACNISGDVLPV-----HQTDDVD-----VTPI---RWKVSFNNGGTGTFLAVFLKLMEQKKKEAEV---------DEEFIRKQ-----QKAFVDPNDPSIIYVTQPVRPRA 161
BLAST of mRNA_F-serratus_M_contig961.20950.1 vs. uniprot
Match: A0A1V9YZ54_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YZ54_9STRA) HSP 1 Score: 78.2 bits (191), Expect = 7.180e-13 Identity = 51/161 (31.68%), Postives = 79/161 (49.07%), Query Frame = 1 Query: 22 RFQAEGNAYLTTERIVFCAKGPHRKQKQNGMLFKGFDIPLDMLSGEKFDQPILFGANNLSGIVQTNVAYAGNRSGEVAHGAAMATPVINSNWRLSFRNGGFGTFVRTFYTALHRRRQADPAVTAVSFQGSDAEWAAMQATEVIQAVPIDPTDGTVLLTATP 504 +F+ G Y+TT+R+VFCA + Q+G F+ ++IPLD ++ KF+QPI FG+ N++G V + G A T + W+LSF NGG GTF+ F + ++A D +A Q + +DP D TV+ + P Sbjct: 41 KFKGNGRIYITTQRLVFCAD---KGSDQHGRNFQAYEIPLDNITENKFNQPI-FGSCNITGDV-------------IPVGTAEGTVATPNQWKLSFNNGGTGTFLPVFLRLMEHHKRAGEV---------DETFADKQ-----RKAYVDPNDPTVIYVSQP 170
BLAST of mRNA_F-serratus_M_contig961.20950.1 vs. uniprot
Match: A0A7S2S2S8_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2S2S8_9STRA) HSP 1 Score: 70.9 bits (172), Expect = 8.500e-11 Identity = 55/166 (33.13%), Postives = 86/166 (51.81%), Query Frame = 1 Query: 31 AEGNAYLTTERIVFCAKGPHRKQKQNGMLFKGFDIPLDMLSGEKFDQPILFGANNLSGIVQTNVAYAGNRSGEVAHGAAMATPVINSNWRLSFRNGGFGTFVRTFYTAL-HRRRQADPAVTAVSFQGSDAEWAAMQATEVIQAVPIDPTDGTVLLTATPVQASAPM 525 + G +LTT+R+VF A+ P KQ+ +G +F+ F+IPL+ ++ EKF+QPI FG+NNL+G V+ G + T ++ ++L F GG GTF+ F+ AL RR A ++ V Q A A P DP+ T+ L + + P+ Sbjct: 43 SNGTVFLTTKRLVFVAE-PAVKQR-DGFMFQAFEIPLEKIADEKFNQPI-FGSNNLAGTVKP------------VPGMGLNT---DAKYKLYFNAGGAGTFLPLFFRALIEARRPAQHSLAQVILQNQFAAVAVQD--------PSDPS--TIFLQQPDIPVATPV 180
BLAST of mRNA_F-serratus_M_contig961.20950.1 vs. uniprot
Match: A0A8K1CLP4_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CLP4_PYTOL) HSP 1 Score: 69.3 bits (168), Expect = 1.890e-10 Identity = 47/162 (29.01%), Postives = 80/162 (49.38%), Query Frame = 1 Query: 25 FQAEGNAYLTTERIVFCAKGPHRKQKQNGMLFKGFDIPLDMLSGEKFDQPILFGANNLSGIVQTNVAYAGNRSGEVAHGAAMATPVINSNWRLSFRNGGFGTFVRTFYTALHRRRQADPAVTAVSFQGSDAEWAAMQATEVIQAVPIDPTDGTVLLTATPVQ 510 ++ +G Y TT+R++F A+ + Q+G+ F+ F+IPL + EKF+QPI FGA ++SG+V + GE T + +W++ F NGG G + F L +R++ + + Q + + +DP D TV+ A PV+ Sbjct: 42 YKGKGRIYCTTQRVIFVAE---KGSMQHGIFFEAFEIPLQNMMDEKFNQPI-FGACSISGLVTPS-------EGE-------DTDTVKFSWKIIFDNGGTGIVLPVFLRMLEKRKRQE-TLDMNFVQNQNKAF-------------VDPNDPTVIYIAQPVK 171
BLAST of mRNA_F-serratus_M_contig961.20950.1 vs. uniprot
Match: A0A1R2CDA6_9CILI (Uncharacterized protein n=1 Tax=Stentor coeruleus TaxID=5963 RepID=A0A1R2CDA6_9CILI) HSP 1 Score: 62.8 bits (151), Expect = 1.760e-7 Identity = 52/164 (31.71%), Postives = 81/164 (49.39%), Query Frame = 1 Query: 22 RFQAEGNAYLTTERIVFCAKGPHRKQKQNGMLFKGFDIPLDMLSGEKFDQPILFGANNLSGIVQTNVAYAGNRSGEVAHGAAMATPVINSNWRLSFRNGGFGTFVRTFYTALH--RRRQADPAVTAVSFQGSDAEWAAMQATEVIQAVP-IDPTDGTVLLTATP 504 +++ +G YLTT R+VF +K++ + FDIP+D++S EKF+QPI FGAN +SG V+ N+ ++ F +GG GTF+ FY + RRR+A+ + G D + A+ IQ V +DP D +V+ P Sbjct: 39 KYKGKGRLYLTTIRLVFV------NEKRSNI--SSFDIPIDLMSHEKFNQPI-FGANYISGSVKPLYNLI----------------PCNAKFKFWFMSGGTGTFLPMFYGIVDQIRRRRANGS------NGPDPRFVESVASGNIQNVAYVDPNDPSVIFVLQP 171 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig961.20950.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 16
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig961.20950.1 >prot_F-serratus_M_contig961.20950.1 ID=prot_F-serratus_M_contig961.20950.1|Name=mRNA_F-serratus_M_contig961.20950.1|organism=Fucus serratus male|type=polypeptide|length=145bp MLFKGFDIPLDMLSGEKFDQPILFGANNLSGIVQTNVAYAGNRSGEVAHGback to top mRNA from alignment at F-serratus_M_contig961:334522..337345- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig961.20950.1 ID=mRNA_F-serratus_M_contig961.20950.1|Name=mRNA_F-serratus_M_contig961.20950.1|organism=Fucus serratus male|type=mRNA|length=2824bp|location=Sequence derived from alignment at F-serratus_M_contig961:334522..337345- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig961:334522..337345- >mRNA_F-serratus_M_contig961.20950.1 ID=mRNA_F-serratus_M_contig961.20950.1|Name=mRNA_F-serratus_M_contig961.20950.1|organism=Fucus serratus male|type=CDS|length=870bp|location=Sequence derived from alignment at F-serratus_M_contig961:334522..337345- (Fucus serratus male)back to top |