mRNA_F-serratus_M_contig96.20919.1 (mRNA) Fucus serratus male
Overview
Homology
BLAST of mRNA_F-serratus_M_contig96.20919.1 vs. uniprot
Match: D7G4D7_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4D7_ECTSI) HSP 1 Score: 381 bits (978), Expect = 3.280e-128 Identity = 175/309 (56.63%), Postives = 224/309 (72.49%), Query Frame = 1 Query: 1 GGTSFPLFWA----EHAENGNYLEPQEISVRHGVCGDPKQRTEEEWNRYSTPNSIWPIQKTLEKGSVMEVTVMMNAYHWGHLEFFLCDAAKLEDPGGVVTQECLNMNPLTRAEGDNDNSPIDPDYSGRYYVDPECHKDETDQGSLTPEDVEDEYYLLHMRYQLPSQLVCEHCILQMVYYTGNTCNHVGYDEFDPPSWPSECAPDKDNWIRSNLKICGEGDKYPEEFYSCSDISITENGEPNPTPAPSEPISDCLDPVELFEQCGGEDWQGSECCRDGFECVFESESYSEVSSSRARPDVFDPPTCSEEW 915 G +PL WA E AENGNYLE EI+ RHG+CGDP+Q EE N YSTPN WPI T ++G V+E+ + M AYHWGH+EFF+C+A ++EDP G+ QEC N PLTRAEGD++NSPIDP+Y GRYYVDP+C + ETDQ PE +D Y ++H YQLP L C+ CILQM YYTGN+C HVGY+EF+P SWPS CAP+K +WI + +CGE YPEEF++C+D +IT +G NPTPAP+EP++DCLDPV ++QCGGED++GS+CCR+G+EC + Y S+ RP P CSE+W Sbjct: 46 GDGEWPLRWAYEKGEMAENGNYLEKDEIAKRHGICGDPEQNEEEGANFYSTPNGDWPILNTYQEGQVLEIKLGMTAYHWGHVEFFICNADEMEDPDGIANQECFNNYPLTRAEGDDENSPIDPNYPGRYYVDPKCREGETDQ--TKPEGAQDGY-VIHASYQLPEGLTCDRCILQMNYYTGNSCKHVGYEEFEPASWPSACAPEKHDWIELDRYLCGENGSYPEEFWACADFAITPDGMANPTPAPTEPLADCLDPVGPYDQCGGEDYEGSDCCREGYECTEMASCY-----SQCRPI---PGGCSEDW 343
BLAST of mRNA_F-serratus_M_contig96.20919.1 vs. uniprot
Match: D7FZR0_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZR0_ECTSI) HSP 1 Score: 311 bits (798), Expect = 2.510e-100 Identity = 160/328 (48.78%), Postives = 210/328 (64.02%), Query Frame = 1 Query: 1 GGTSFPLFWAEHAENGNYLEPQEISVRHGVCGDPKQRTEEEWNRYSTPNSIWPIQKTLEKGSVMEVTVMMNAYHWGHLEFFLCDAAKLEDPGGVVTQECLNMNPLTRAEGDNDNSPIDPDYSGRYYVDPECHKD--ETDQG----SLTPEDVEDEYYLLHMRYQLPSQLVCEHCILQMVYYTGNTCNHVGYDEFDPPSWPSECAPDKDNWIRSNLKICGEGDKYPEEFYSCSDISITENGEPNPTPAPS----EPISDCLDPVELFEQCGGED-------WQGSECCRDGFECVFESESYSEV-----SSSRARPDVFDPPTCSEEWG 918 GG+ FPL + A NGNYLEP E++VRHGVCGDP+Q N YST +S W T G V+E ++MNA+HWGHLEFF+C+A DP G+ TQEC N PLTRAEGD+DNSPIDP++ GRYY DP C E DQ +++ E+++ MRY LP + C HCILQMVY+TGNTC+H+GY+EF+PPSWPS CAP+K++W+ + + CG+G YPEEF++CSD SIT + P P+P PS P+++ + E + QCGG W G CC G C ++ E +SE SSS P+ +P C+EEWG Sbjct: 77 GGSEFPLAFVPLAPNGNYLEPNEVAVRHGVCGDPEQTKPAGSNTYSTASSNWEPLATYRSGQVLEFVIVMNAHHWGHLEFFICNADN--DPDGIPTQECFNEYPLTRAEGDDDNSPIDPNFPGRYYCDPTCRGQTGEVDQTKPLHAISGENMK-------MRYVLPD-IECSHCILQMVYHTGNTCHHIGYEEFNPPSWPSACAPNKEDWVDTTREACGQGGYYPEEFWACSDFSITRDATP-PSPTPSVETIPPVNEPTECAEEWGQCGGAGGGAVDGVWTGPTCCVSGTTCSYKDEWWSECRPTGDSSSDDTPE--EPTECAEEWG 391
BLAST of mRNA_F-serratus_M_contig96.20919.1 vs. uniprot
Match: D8LMS9_ECTSI (EsV-1-166 n=3 Tax=Ectocarpus TaxID=2879 RepID=D8LMS9_ECTSI) HSP 1 Score: 303 bits (775), Expect = 3.690e-96 Identity = 143/266 (53.76%), Postives = 182/266 (68.42%), Query Frame = 1 Query: 1 GGTSFPLFWAEHAENGNYLEPQEISVRHGVCGDPKQRTEEEWNRYSTPNSIWPIQKTLEKGSVMEVTVMMNAYHWGHLEFFLCDAAKLEDPGGVVTQECLNMNPLTRAEGDNDNSPIDPDYSGRYYVDPECHKDETDQGSLTPEDVEDEYYLLHMRYQLPSQLVCEHCILQMVYYTGNTCNHVGYDEFDPPSWPSECAPDKDNWIRSNLKICGEGDKYPEEFYSCSDISITENGE-----PNPTPAPSEPISDCLDP-VELFEQCG 780 GG FPL++ E A+NGNYLE EI+ RHGVCGDP+Q +E N YST N W + G V+E+ ++MNAYHWGH EFF+C+ ++DP GV TQEC NM+PLTRA+ D D SPIDP+Y GRYYVDPEC ++ET+Q S + E Y + MRY LP + CEHCILQMVYYTGNTC H+GY+EF+P SWPS CAP+K +WI + +CG +YPEEF++CSD S+T +G P P P E D D +E++E G Sbjct: 79 GGEEFPLYFGEFADNGNYLETNEIAKRHGVCGDPEQNADEGTNVYSTANINWDPLDSFTSGQVLEMDIVMNAYHWGHCEFFVCNTDDMDDPDGVPTQECFNMHPLTRADDDGDASPIDPNYPGRYYVDPECREEETEQSSNSIEG-----YNIKMRYVLPD-IECEHCILQMVYYTGNTCKHIGYEEFNPTSWPSSCAPNKWDWIELDRYVCGTRGQYPEEFWACSDFSMTSDGSTPADAPMPDPVDEEDDEDSTDGGMEMYEYVG 338
BLAST of mRNA_F-serratus_M_contig96.20919.1 vs. uniprot
Match: D7FZQ9_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZQ9_ECTSI) HSP 1 Score: 296 bits (758), Expect = 7.000e-94 Identity = 152/307 (49.51%), Postives = 188/307 (61.24%), Query Frame = 1 Query: 1 GGTSFPLFWAEHAENGNYLEPQEISVRHGVCGDPKQRTEEEWNRYSTPNSIWPIQKTLEKGSVMEVTVMMNAYHWGHLEFFLCDAAKLEDPGGVVTQECLNMNPLTRAEGDNDNSPIDPDYSGRYYVDPECHKDETDQGSLTP-EDVEDEYYLLHMRYQLPSQLVCEHCILQMVYYTGNTCNHVGYDEFDPPSWPSECAPDKDNWIRSNLKICGEGDKYPEEFYSCSDISITENGEPNPT------PAPSEPISDCLDPVELFEQCGGED-------WQGSECCRDGFECVFESESYSEVSSSRARP 879 GG FPL + A NGNYLEP E++VRHGVCGDP+Q N YST +S W T + G +E V+MNAYHWGHLEFF+C+A DP G+ TQEC N PLTRAEGD+ NSPIDPD+ GRYY DP C +E + P + E + MRY LP + C HCILQMVY+TGNTC H+GYD+FDPPSWP +CA K+ W+ + ++ CG+ YPEEF++CSD SIT +G P+ T PA +EP C E ++QCGG W G CC G C Y +V S RP Sbjct: 78 GGIDFPLSFVPRAPNGNYLEPNEVAVRHGVCGDPEQNKPSGSNTYSTASSNWEPLTTFQSGQDLEFNVVMNAYHWGHLEFFICNADN--DPNGIPTQECFNEYPLTRAEGDDYNSPIDPDFPGRYYCDPTCRGEEGEVDQTKPVHAISGEN--MKMRYVLPD-IECSHCILQMVYHTGNTCYHIGYDDFDPPSWPGDCATTKEQWVNTTVEACGQEGYYPEEFWACSDFSITSDGPPSSTXXXXXXPAVTEPTG-C---AEEWQQCGGAGGDAVGGVWTGPTCCVPGTTCY-----YKDVYWSDCRP 370
BLAST of mRNA_F-serratus_M_contig96.20919.1 vs. uniprot
Match: D8LM93_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM93_ECTSI) HSP 1 Score: 266 bits (679), Expect = 1.570e-83 Identity = 124/244 (50.82%), Postives = 163/244 (66.80%), Query Frame = 1 Query: 1 GGTSFPLFWAEHAENGNYLEPQEISVRHGVCGDPKQRTEEEWNRYSTPNSIWPIQKTLEKGSVMEVTVMMNAYHWGHLEFFLCDAAKLEDPGG---VVTQECLNMNPLTRAEGDNDNSPIDPDYSGRYYVDPECHKDETDQGSLT---PEDVEDEYYLLHMRYQLPSQLVCEHCILQMVYYTGNTCNHVGYDEFDPPSWPSECAPDKDNWIRSNLKICGEGDKYPEEFYSCSDISITENGEPNP 714 G +P F E AENGNY+E +E++ RHG+CGDP+Q E N+Y NS +P+++T +G ++EV ++++ YHWGH+E FLC+AA L PGG VTQ C N +PL RA+ D N P DPD +GR+ +DP C ETDQ L P DV R++LP L CE C++QMVYYTGN+C H GY EF+PPSWPS CAP K +WI + CG+GD YPEEF++C+DISIT +G P P Sbjct: 74 GDKPWPHFNGERAENGNYIESEEVARRHGICGDPEQTAAESSNKYGQENSNYPVRETYAEGGILEVKIVVSTYHWGHVEMFLCNAANL--PGGPDSTVTQSCFNEHPLDRADDDEFNGPADPDNTGRFILDPPCRASETDQALLDGAYPSDV------ATARFKLPQGLSCERCVVQMVYYTGNSCKHQGYAEFNPPSWPSSCAPSKADWINEVVGQCGDGDAYPEEFWNCADISITSDGGPAP 309
BLAST of mRNA_F-serratus_M_contig96.20919.1 vs. uniprot
Match: D7FRE8_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRE8_ECTSI) HSP 1 Score: 281 bits (719), Expect = 7.370e-82 Identity = 136/249 (54.62%), Postives = 172/249 (69.08%), Query Frame = 1 Query: 1 GGTSFPLFWAEHAENGNYLEPQEISVRHGVCGDPKQRTEEEWNRYSTPNSIWPIQKTLEKGSVMEVTVMMNAYHWGHLEFFLCDAAKLEDPGGVVTQECLNMNPLTRAEGDNDNSPIDPDYSGRYYVDPECHKDETDQGSLTPEDVEDEYYLLHMRYQLPSQLVCEHCILQMVYYTGNTCNHVGYDEFDPPSWPSECAPDKDNWIRSNLKICGEGDKYPEEFYSCSDISITENGE-PNPTP--APSEPI 738 GG +PL++ + A+NGNYLE EI+ RHG+CGDP+Q +E N YST N W + + + G V+E+ ++MNAYHWGH EFFLC+A +++DP GV TQEC N PLTRA D D SPIDP+Y GRYYVDPEC ET+QGS PE + Y + MRY LP + C+ C+LQM H+GYDEFDPPSWPS CAP+K +WI N ICGE YPEEF++CSDIS+T +G P PTP P+ P+ Sbjct: 83 GGDEYPLYFGDFADNGNYLETDEIAKRHGICGDPEQNADEGSNVYSTANIGWDVLGSFKSGEVLEMDIIMNAYHWGHCEFFLCNADEMDDPDGVPTQECFNRYPLTRAADDGDASPIDPNYPGRYYVDPECRAGETEQGS--PEGAP-KGYNIKMRYVLPD-IECDRCVLQM---------HIGYDEFDPPSWPSTCAPNKSDWIELNRYICGEEGAYPEEFWACSDISLTSDGSAPPPTPYTTPTTPV 318
BLAST of mRNA_F-serratus_M_contig96.20919.1 vs. uniprot
Match: A0A6H5JFL8_9PHAE (CBM1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFL8_9PHAE) HSP 1 Score: 267 bits (682), Expect = 1.260e-81 Identity = 130/250 (52.00%), Postives = 169/250 (67.60%), Query Frame = 1 Query: 1 GGTSFPLFWA----EHAENGNYLEPQEISVRHGVCGDPKQRTEEEWNRYSTPNSIWPIQKTLEKGSVMEVTVMMNAYHWGHLEFFLCDAAKLE-DPGGVVTQECLNMNPLTRAEGDNDNSPIDPDYSGRYYVDPECHKDETDQGSLTPEDVEDEYYLLHMRYQLPSQLVCEHCILQMVYYTGNTCNHVGYDEFDPPSWPSECAPDKDNWIRSNLKICGEGDKYPEEFYSCSDISITENGEPNPTPAPSEP 735 G +PL A E +NGN+ E EIS RHG+CGDPKQ + E N YS+ S W +TL++G V+++ V++ Y GHLEFF+C++A L P QEC NMNPLTRAEGD+ NSPIDP Y GRYYV+P CH T+ P+ +D Y +++M+YQLP L C+HC+LQMV+YTGNTC HVGYD+F+P SWPS+CAP K WI ++ +CG YPEE +SCSDISIT +G + +P EP Sbjct: 79 GDGEWPLLAAYNKGEMCDNGNFYERDEISARHGICGDPKQFSLESTNAYSSSLSDWSALETLKEGGVLDIKVVVAEYLGGHLEFFICNSADLRYGPTSKPNQECFNMNPLTRAEGDDVNSPIDPAYPGRYYVNPPCHA--TEHPEALPDGAQDGY-VINMQYQLPEGLTCDHCVLQMVHYTGNTCKHVGYDDFEPESWPSQCAPTKAEWINTDHWMCGMAGAYPEEHWSCSDISITTDGPTEKSSSPVEP 325
BLAST of mRNA_F-serratus_M_contig96.20919.1 vs. uniprot
Match: D7FU28_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU28_ECTSI) HSP 1 Score: 266 bits (680), Expect = 3.370e-79 Identity = 128/246 (52.03%), Postives = 163/246 (66.26%), Query Frame = 1 Query: 1 GGTSFPLFWA----EHAENGNYLEPQEISVRHGVCGDPK---QRTEEEWNRYSTPNSIWPIQKTLEKGSVMEVTVMMNAYHWGHLEFFLCDAAKLEDPGGVVTQECLNMNPLTRAEGDNDNSPIDPDYSGRYYVDPECHKDETDQGSLTPEDVEDEY-------YLLHMRYQLPSQLVCEHCILQMVYYTGNTCNHVGYDEFDPPSWPSECAPDKDNWIRSNLKICGEGD-KYPEEFYSCSDISIT 693 G +PL W E A NGNY+EPQ ISVRHGVCGDPK Q ++ N YSTPN WP+ + ++G ME+ +M A+H+GHLEFF+CD L+DP V TQEC N PLTR+EGD NSPIDP+Y GRYY DP C ++ET+Q +Y Y++ M Y LP LVCEHC+LQM YYTG+ C H GY+EF+P SW SECAP+K +WI ++ CG+ + EEF++CSDI+IT Sbjct: 45 GDGWYPLRWVYDKGEMAPNGNYIEPQGISVRHGVCGDPKSGDQGGQDGENTYSTPNKDWPVLQEFKQGQSMEIKAVMKAWHYGHLEFFICDTQDLDDPDDVATQECFNKYPLTRSEGDGVNSPIDPNYPGRYYADPPCRENETEQ----------DYDWRAGGGYVMTMNYDLPENLVCEHCVLQMWYYTGHKCYHPGYEEFNPASWGSECAPNKSDWIDLSIDYCGDNEWNLAEEFWACSDIAIT 280
BLAST of mRNA_F-serratus_M_contig96.20919.1 vs. uniprot
Match: D8LD67_ECTSI (EsV-1-166 n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD67_ECTSI) HSP 1 Score: 259 bits (662), Expect = 5.170e-79 Identity = 120/237 (50.63%), Postives = 155/237 (65.40%), Query Frame = 1 Query: 1 GGTSFPLFWAEHAENGNYLEPQEISVRHGVCGDPKQRTEEEWNRYSTPNSIWPIQKTLEKGSVMEVTVMMNAYHWGHLEFFLCDAAKLED-PGGVVTQECLNMNPLTRAEGDNDNSPIDPDYSGRYYVDPECHKDETDQGSLTPEDVEDEYYLLHMRYQLPSQLVCEHCILQMVYYTGNTCNHVGYDEFDPPSWPSECAPDKDNWIRSNLKICGEGDKYPEEFYSCSDISITENGEP 708 G +P F E A+NGNY+E E++ RHGVCGDP+Q E N+Y NS +P+ +T +G ++EV ++++ YHWGH+E FLCDA L D P VVTQ C N PL RAE D N PIDP GR+ +DP C ETDQ L D + R+QLP + CE C++QM YYTGN+C H GY EF+PPSWPS CAP K +WI + CG+GD YPEEF++C+D+SIT +G P Sbjct: 71 GDQPWPHFNGERAKNGNYIESDEVAQRHGVCGDPEQTAAEGSNKYGQENSNYPVLETYAEGGILEVKIVVSTYHWGHVEMFLCDADDLPDGPDSVVTQSCFNEYPLDRAEDDEFNGPIDPLNRGRFILDPPCRASETDQELLPGAFAGD---VATARFQLPQGVTCERCVVQMAYYTGNSCKHQGYAEFNPPSWPSSCAPSKADWINEAVGQCGDGDAYPEEFWNCADVSITSDGGP 304
BLAST of mRNA_F-serratus_M_contig96.20919.1 vs. uniprot
Match: D8LM92_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM92_ECTSI) HSP 1 Score: 264 bits (674), Expect = 1.320e-78 Identity = 127/257 (49.42%), Postives = 168/257 (65.37%), Query Frame = 1 Query: 1 GGTSFPLFWAEHAENGNYLEPQEISVRHGVCGDPKQRTEEEWNRYSTPNSIWPIQKTLEKGSVMEVTVMMNAYHWGHLEFFLCDAAKLEDPGG---VVTQECLNMNPLTRAEGDNDNSPIDPDYSGRYYVDPECHKDETDQGSLT---PEDVEDEYYLLHMRYQLPSQLVCEHCILQMVYYTGNTCNHVGYDEFDPPSWPSECAPDKDNWIRSNLKICGEGDKYPEEFYSCSDISITENGEPNP------TPAPSEP 735 G +P F E AENGNY+E +E++ RHG+CGDP+Q E+ N+Y NS +P+ +T +G ++E ++++ YHWGH+E FLCDA L PGG VTQ C N +PL R + D+ NSPIDP +GR+ +DP C ETDQ L P DV R++LP L CE C++QMVYYTGN+C H GY EF+P SWPS CAP K +WI + CG+GD YPEEF++C+DISIT +G+P P TPAP+ P Sbjct: 73 GDKPWPHFNGERAENGNYIESEEVAQRHGICGDPEQTAAEDSNKYGLENSNYPVLETYAEGGILEFKMVVSTYHWGHVEMFLCDADDL--PGGPDSTVTQSCFNEHPLDRVDDDDFNSPIDPSNTGRFILDPPCRASETDQEMLDGAFPGDV------ATARFKLPQGLTCERCVVQMVYYTGNSCKHQGYAEFNPESWPSSCAPTKADWINEVVGHCGDGDAYPEEFWNCADISITSDGDPAPSPTTVLTPAPTAP 321 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig96.20919.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig96.20919.1 >prot_F-serratus_M_contig96.20919.1 ID=prot_F-serratus_M_contig96.20919.1|Name=mRNA_F-serratus_M_contig96.20919.1|organism=Fucus serratus male|type=polypeptide|length=344bp GGTSFPLFWAEHAENGNYLEPQEISVRHGVCGDPKQRTEEEWNRYSTPNSback to top mRNA from alignment at F-serratus_M_contig96:543819..549732+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig96.20919.1 ID=mRNA_F-serratus_M_contig96.20919.1|Name=mRNA_F-serratus_M_contig96.20919.1|organism=Fucus serratus male|type=mRNA|length=5914bp|location=Sequence derived from alignment at F-serratus_M_contig96:543819..549732+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig96:543819..549732+ >mRNA_F-serratus_M_contig96.20919.1 ID=mRNA_F-serratus_M_contig96.20919.1|Name=mRNA_F-serratus_M_contig96.20919.1|organism=Fucus serratus male|type=CDS|length=2064bp|location=Sequence derived from alignment at F-serratus_M_contig96:543819..549732+ (Fucus serratus male)back to top |