mRNA_F-serratus_M_contig96.20919.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig96.20919.1
Unique NamemRNA_F-serratus_M_contig96.20919.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
[Close]
BLAST of mRNA_F-serratus_M_contig96.20919.1 vs. uniprot
Match: D8LMF4_ECTSI (EsV-1-166 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMF4_ECTSI)

HSP 1 Score: 253 bits (647), Expect = 1.870e-76
Identity = 120/244 (49.18%), Postives = 154/244 (63.11%), Query Frame = 1 
Query:    1 GGTSFPLFWAEHAENGNYLEPQEISVRHGVCGDPKQRTEEEWNRYSTPNSIWPIQKTLEKGSVMEVTVMMNAYHWGHLEFFLCDAAKL-EDPGGVVTQECLNMNPLTRAEGDNDNSPIDPDYSGRYYVDPECHKDETDQGSLT---PEDVEDEYYLLHMRYQLPSQLVCEHCILQMVYYTGNTCNHVGYDEFDPPSWPSECAPDKDNWIRSNLKICGEGDKYPEEFYSCSDISITENGEPNPTP 720
            G   +P +    A NGNYLE  E++ RHG+CGDP+Q   E  N+Y   N  +P+  T  +G V+EV ++++ YHWGH+E FLCD A L E    +VTQ C N  PL RA  D  N PIDP+Y GR+ +DP C   ETDQ  +    P DV         RYQLP  +VC+ C++QMVYYTGN+C H GY EF+P SWPS CAP K +WI   +  CG+GD YPEEF++C+DISIT +G P   P
Sbjct:   78 GDKPWPHYQGARAANGNYLESDEVAQRHGICGDPEQTAAEGDNKYGRENYNYPVLGTYAEGGVLEVKILVSTYHWGHVEAFLCDTADLPEGEDSIVTQSCFNDYPLDRAIDDEFNGPIDPEYKGRFILDPPCRASETDQDLVEGAYPGDV------ATARYQLPEGVVCDRCVVQMVYYTGNSCKHEGYAEFNPESWPSSCAPSKADWINEVVGQCGDGDAYPEEFWNCADISITSDGGPGTAP 315
[Close]
BLAST of mRNA_F-serratus_M_contig96.20919.1 vs. uniprot
Match: A0A6H5KD35_9PHAE (CBM1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KD35_9PHAE)

HSP 1 Score: 249 bits (636), Expect = 1.780e-75
Identity = 118/240 (49.17%), Postives = 155/240 (64.58%), Query Frame = 1 
Query:    1 GGTSFPLFWAEHAENGNYLEPQEISVRHGVCGDPKQRTEEEWNRYSTPNSIWPIQKTLEKGSVMEVTVMMNAYHWGHLEFFLCDAAKLED-PGGVVTQECLNMNPLTRAEGDNDNSPIDPDYSGRYYVDPECHKDETDQGSLT---PEDVEDEYYLLHMRYQLPSQLVCEHCILQMVYYTGNTCNHVGYDEFDPPSWPSECAPDKDNWIRSNLKICGEGDKYPEEFYSCSDISITENGEP 708
            G   +P F  E AENGNY+E  E++ RHGVCGDP+Q   E  N+Y   NS +P+ +T  +G ++EV ++++ YHWGH+E FLCDA  L D P  VVTQ C N +PL RAE D  N PIDP   GR+ +DP C   ETDQ  +    P DV         R+QLP  + CE C++QM Y+  N+C H GY EF+PPSWP  CAP K +WI+  +  CG+GD YPEEF++C+D+SIT +G P
Sbjct:   42 GDQPWPHFNGERAENGNYIESDEVAQRHGVCGDPEQTAAEGSNKYGQENSKYPVLETYAEGGILEVKIVVSTYHWGHVEMFLCDADDLPDGPDSVVTQSCFNEHPLDRAEDDEFNGPIDPLNRGRFILDPPCRASETDQELVPGAFPGDV------ATARFQLPQGVTCERCVVQMAYW--NSCKHQGYAEFNPPSWPGSCAPSKADWIKEAVGQCGDGDAYPEEFWNCADVSITSDGGP 273
[Close]
BLAST of mRNA_F-serratus_M_contig96.20919.1 vs. uniprot
Match: A0A6H5KDP0_9PHAE (WSC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDP0_9PHAE)

HSP 1 Score: 242 bits (617), Expect = 3.110e-74
Identity = 121/240 (50.42%), Postives = 156/240 (65.00%), Query Frame = 1 
Query:    1 GGTS-FPLFWAEHAENGNYLEPQEISVRHGVCGDPKQRTEEEWNRYSTPNSIWPIQKTLEKGSVMEVTVMMNAYHWGHLEFFLCDAAKLEDPGGVVTQECLNMNPLTRAEGDNDNSPIDPDYSGRYYVDPECHKDETDQGSLT---PEDVEDEYYLLHMRYQLPSQLVCEHCILQMVYYTGNTCNHVGYDEFDPPSWPSECAPDKDNWIRSNLKICGEGDK-YPEEFYSCSDISITENGE 705
            GG   +PL + + AENGN LEP+EIS RH +CGDP   ++EE    +TPN+ W +  T   G V+E+ ++MN YHW   +F +CDAA L DP GV TQECLN +PLTRA  D D SPIDP+Y+GRYY DP C  +ETDQ       P     + Y + MR+  P  + C HCILQ+ Y+TG+TC HV YDEF+PPSW S CAP K +W+ ++L  CG G   Y EEF+SCS  + TE  +
Sbjct:   10 GGVDVYPLQYPDFAENGNMLEPEEISKRHFLCGDPVSGSDEEDILCTTPNAEWEVLSTFISGQVIEMDIVMNFYHW--FQFSICDAADLNDPDGVGTQECLNTHPLTRAPDDGDGSPIDPNYTGRYYPDPPCRLNETDQAFYKDGLPSGTGYDPYGIKMRFLFPD-IECSHCILQVYYFTGHTCKHVDYDEFNPPSWRSNCAPHKSDWVFTDLPRCGTGKYLYAEEFWSCSGDTQTEGND 246
[Close]
BLAST of mRNA_F-serratus_M_contig96.20919.1 vs. uniprot
Match: A0A6H5JNS7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNS7_9PHAE)

HSP 1 Score: 239 bits (609), Expect = 1.470e-73
Identity = 119/235 (50.64%), Postives = 157/235 (66.81%), Query Frame = 1 
Query:   31 EHAENGNYLEPQEISVRHGVCGDPKQRTEEEWNRYSTPNSIWPIQKTLEKGSVMEVTVMMNAYHWGHLEFFLCDAAKLEDPGGVVTQECLNMNPLTRAEGDNDNSPIDPDYSGRYYVDPECH--KDETDQGS---LTPEDVE-DEYYLLHMRYQLPSQLVCEHCILQMVYYTGNTCNHVGYDEFDPPSWPSECAPDKDNWIRSNLKICG-EGDKYPEEFYSCSDISITENGEPNP 714
            E   N NYLE  +I+V HGVCGDP Q   +  N YSTPN++WP   T E GS++E+  ++N  HWGH+E+FLCD A ++DP GVVTQ+CLNM+PL R E D  NSPID +Y GR++V+P+C    +ETDQ     LT   +  D+ Y+ + RY LP+ + CEHC+LQM YY    C+H GY EFDP  WP +CAPDK++W+      CG EG K+   F+ CSDI++  NGE NP
Sbjct:   44 ERCPNNNYLESDKIAVGHGVCGDPPQGGLDNPNTYSTPNTLWPPISTYESGSIIEIRTVINNNHWGHIEYFLCDTADMDDPDGVVTQDCLNMHPLDRDETDWWNSPIDQEYPGRFFVNPDCRGGNEETDQSGRPVLTGGGLGLDKGYINNGRYHLPN-IQCEHCVLQMKYYAYVGCHHPGYHEFDP-EWPGDCAPDKEDWLPHKNPGCGDEGRKWGNVFFGCSDITLVANGEINP 276
[Close]
BLAST of mRNA_F-serratus_M_contig96.20919.1 vs. uniprot
Match: A0A6H5JI36_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JI36_9PHAE)

HSP 1 Score: 241 bits (616), Expect = 5.040e-72
Identity = 128/308 (41.56%), Postives = 164/308 (53.25%), Query Frame = 1 
Query:   43 NGNYLEPQEISVRHGVCGDPKQRTEEEWNRYSTPNSIWPIQKTLEKGSVMEVTVMMNAYHW-----------------------------------------------------------------------GHLEFFLCDAAKLEDPGGVVTQECLNMNPLTRAEGDNDNSPIDPDYSGRYYVDPECHKDETDQGSLT---PEDVEDEYYLLHMRYQLPSQLVCEHCILQMVYYTGNTCNHVGYDEFDPPSWPSECAPDKDNWIRSNLKICGEGDKYPEEFYSCSDISIT---ENGEPNPT-PAPSE 732
            NGNY EP+EISVRHG+CGDP+Q   E  N Y   NS +P+     +G ++E+ ++++ YHW                                                                       GHLEFF+C+A  + DP GVVTQ C NM+PL RA+ D D SPIDPD+ GRYY+DP C   ETDQ +L    P DV         RY+LPS L C  CILQMVYYTGN C H GYDEFDP S P  CAP K++W+++ L +CGE  +YPEEF++C+DI IT   + G P PT P+P++
Sbjct:   82 NGNYYEPEEISVRHGICGDPEQTKAEGTNLYGQENSKYPVHGKYSEGGIIEIKIVVSTYHWVRELPELSAQGFICGIAYLAFLVLVAAFAVVVFVFVVEEGEWKSAPTLYAHRAYEAVPGKYRALDYVHGGSGHLEFFICNAEDMSDPDGVVTQGCFNMHPLDRADDDGDASPIDPDHIGRYYLDPPCRAGETDQDTLPGAYPGDV------ATARYKLPSGLTCSRCILQMVYYTGNACKHPGYDEFDPVSVPDGCAPTKEDWVQTQLGMCGEDGRYPEEFWNCADIEITSDEDGGGPAPTTPSPTD 383
[Close]
BLAST of mRNA_F-serratus_M_contig96.20919.1 vs. uniprot
Match: A0A6H5KTY6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTY6_9PHAE)

HSP 1 Score: 249 bits (637), Expect = 6.290e-72
Identity = 118/242 (48.76%), Postives = 157/242 (64.88%), Query Frame = 1 
Query:    1 GGTSFPLFWAEHAENGNYLEPQEISVRHGVCGDPKQRTEEEWNRYSTPNSIWPIQKTLEKGSVMEVTVMMNAYHWGHLEFFLCDAAKLEDPGG---VVTQECLNMNPLTRAEGDNDNSPIDPDYSGRYYVDPECHKDETDQGSLT---PEDVEDEYYLLHMRYQLPSQLVCEHCILQMVYYTGNTCNHVGYDEFDPPSWPSECAPDKDNWIRSNLKICGEGDKYPEEFYSCSDISITENGEP 708
            G   +P F  + A NGNY+E +E++ RHG+CGDP+Q   E  N Y   NS +P+ +T  +G ++E  ++++ YHWGH+E FLCDA  L  PGG    VTQ C N +PL R + D  NSPIDP  +GR+ +DP C   ETDQ  L    P DV         R++LP  + CE C++QMVYYTGN+C H GY EF+P SWPS CAP K +WI   +  CG+GD YPEEF++C+DISIT +G+P
Sbjct:   73 GDQPWPHFNGDRAANGNYIESEEVAQRHGICGDPEQTAAEGSNLYGLENSNYPVLETYAEGGILEFKMVVSTYHWGHVEMFLCDANDL--PGGPDSTVTQSCFNEHPLDRVDDDYFNSPIDPSNTGRFILDPPCRASETDQELLDGAFPGDV------ATARFKLPEGVSCERCVVQMVYYTGNSCKHQGYAEFNPDSWPSSCAPTKADWINELVGFCGDGDAYPEEFWNCADISITSDGDP 306
[Close]
BLAST of mRNA_F-serratus_M_contig96.20919.1 vs. uniprot
Match: D8LED5_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LED5_ECTSI)

HSP 1 Score: 230 bits (586), Expect = 2.460e-68
Identity = 115/232 (49.57%), Postives = 152/232 (65.52%), Query Frame = 1 
Query:   31 EHAENGNYLEPQEISVRHGVCGDPKQRTEEEWNRYSTPNSIWPIQKTLEKGSVMEVTVMMNAYHWGHLEFFLCDAAKLEDPGGVVTQECLNMNPLTRAEGDNDNSPIDPDYSGRYYVDPECH--KDETDQGS---LTPEDVE-DEYYLLHMRYQLPSQLVCEHCILQMVYYTGNTCNHVGYDEFDPPSWPSECAPDKDNWIRSNLKICG-EGDKYPEEFYSCSDISITENGE 705
            E   N NYLE  +I+V HGVCGDP Q   +  N YSTPN++WP   T E GS++E+  ++N  HWGH+E+FLCD A ++D  GVVTQ+CLN  PL R E D  NSPIDP+Y GR++V+PEC    +ETDQ     LT   +  D+ Y+ + RY LP+ + CEHC+LQM YY    C+H GY EF+P  WP +CAPDK++W+      C  EG K+   F+ CSDI++  NGE
Sbjct:    3 ERCPNNNYLESDKIAVGHGVCGDPPQGGLDNPNTYSTPNTLWPPISTYESGSIIEIRAVINNNHWGHIEYFLCDTADMDDADGVVTQDCLNKYPLDRDETDWWNSPIDPNYPGRFFVNPECRGENEETDQSGRPELTGGGLGLDKGYINNGRYHLPN-IQCEHCVLQMKYYAYVGCHHPGYHEFEP-EWPGDCAPDKEDWLPHKNPGCSDEGQKWGNVFFGCSDITLVANGE 232
[Close]
BLAST of mRNA_F-serratus_M_contig96.20919.1 vs. uniprot
Match: A0A6H5JMP7_9PHAE (Chitin-binding type-4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMP7_9PHAE)

HSP 1 Score: 229 bits (583), Expect = 2.910e-68
Identity = 115/230 (50.00%), Postives = 151/230 (65.65%), Query Frame = 1 
Query:   31 EHAENGNYLEPQEISVRHGVCGDPKQRTEEEWNRYSTPNSIWPIQKTLEKGSVMEVTVMMNAYHWGHLEFFLCDAAKLEDPGGVVTQECLNMNPLTRAEGDNDNSPIDPDYSGRYYVDPECHKD--ETDQ-GSLTPEDVE---DEYYLLHMRYQLPSQLVCEHCILQMVYYTGNTCNHVGYDEFDPPSWPSECAPDKDNWIRSNLKICG-EGDKYPEEFYSCSDISITEN 699
            E   N NYLE  +I+V HGVCGDP Q   +  N YSTPN++WP   T + GS++E+  ++N  HWGH+E+FLCD A ++DP GVVTQ+CLNM PL R E D  NSPIDPDY GR++V+PEC  +  ETDQ G     D E   D  Y+   RY LP+ + CEHC+LQM YY    C+H GY EF+P  WP +CAPDK++W+      C  EG K+   F+ CSDI++ ++
Sbjct:  142 ERCPNNNYLESDKIAVGHGVCGDPPQGGLDNPNTYSTPNTLWPPISTYQSGSIIELKAVINNNHWGHIEYFLCDTADMDDPDGVVTQDCLNMYPLDRDETDWWNSPIDPDYPGRFFVNPECRGETGETDQTGRPMLNDGEVGLDNGYINVGRYHLPN-IQCEHCVLQMKYYAYVGCHHPGYHEFEP-EWPGDCAPDKEDWLPHKNPGCSDEGQKWGNVFFGCSDITLAKH 369
[Close]
BLAST of mRNA_F-serratus_M_contig96.20919.1 vs. uniprot
Match: A0A6H5L279_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L279_9PHAE)

HSP 1 Score: 222 bits (566), Expect = 5.890e-67
Identity = 109/230 (47.39%), Postives = 135/230 (58.70%), Query Frame = 1 
Query:    1 GGTSFPLFWAEHAENGNYLEPQEISVRHGVCGDPKQRTEEEWNRYSTPNSIWPIQKTLEKGSVMEVTVMMNAYHWGHLEFFLCDAAKLEDPGGVVTQECLNMNPLTRAEGDNDNSPIDPDYSGRYYVDPECHKDETDQGSLTPEDVEDEYYLLHMRYQLPSQLVCEHCILQMVYYTGNTCNHVGYDEFDPPSWPSECAPDKDNWIRSNLKICGEGDKYPEEFYSCSDISI 690
            GG  FPL +   A NGNYLEP E++VRHGVCGDP+Q      N YST +S W    T + G V+E  V+MNAYHWGHLEFF+C+A    DP G+ TQEC N  P     G+N                                        + MRY LP  + C HCILQMVY+TGNTC H+GY+EF+PPSWPS CAPDK++W+ +  + CG+G  YPEEF++CSD SI
Sbjct:   11 GGNEFPLAFVPLAPNGNYLEPNEVAVRHGVCGDPEQFKPSGSNTYSTASSNWEPLATFQSGQVLEFDVVMNAYHWGHLEFFICNADS--DPDGIPTQECFNQ-PSPAISGNN----------------------------------------MKMRYVLPD-IECSHCILQMVYHTGNTCYHMGYEEFNPPSWPSACAPDKEDWVDTTGQACGQGGYYPEEFWACSDFSI 196
[Close]
BLAST of mRNA_F-serratus_M_contig96.20919.1 vs. uniprot
Match: D8LED7_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LED7_ECTSI)

HSP 1 Score: 234 bits (597), Expect = 2.000e-66
Identity = 122/245 (49.80%), Postives = 158/245 (64.49%), Query Frame = 1 
Query:   31 EHAENGNYLEPQEISVRHGVCGDPKQRTEEEWNRYSTPNSIWPIQKTLEKGSVMEVTVMMNAYHWGHLEFFLCDAAKLEDPGGVVTQECLNMNPLTRAEGDNDNSPIDPDYSGRYYVDPECHKD--ETDQ-GSLTPEDVE---DEYYLLHMRYQLPSQLVCEHCILQMVYYTGNTCNHVGYDEFDPPSWPSECAPDKDNWIRSNLKICG-EGDKYPEEFYSCSDISITENGEPNPTPAPSEPISD 744
            E   N NYLE  +I+V HGVCGDP Q   +  N YSTPN++WP   T   GS++E+  ++N  HWGH+E+FLCD A ++DP GVVTQ+CLNM PL R E D  NSPIDPDY GR++V+PEC  +  ETDQ G     D E   D  Y+   RY LP+ + CEHC+LQM YY    C+H GY EF+P  WP +CAPDK++W+      C  EG K+   F+ CSDI++  +GE + T AP+ P  D
Sbjct:  100 ERCPNNNYLESDKIAVGHGVCGDPPQGGLDNPNTYSTPNTLWPPISTYTSGSIIELKAVINNNHWGHIEYFLCDTADMDDPDGVVTQDCLNMYPLDRDETDWWNSPIDPDYPGRFFVNPECRGENGETDQTGRPMLNDGEVGLDNGYINVGRYHLPN-IQCEHCVLQMKYYAYVGCHHPGYHEFEP-EWPGDCAPDKEDWLPHKNPGCSDEGQKWGNVFFGCSDITLLADGETSST-APAAPTPD 341
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig96.20919.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LMF4_ECTSI1.870e-7649.18EsV-1-166 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LM... [more]
A0A6H5KD35_9PHAE1.780e-7549.17CBM1 domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5KDP0_9PHAE3.110e-7450.42WSC domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5JNS7_9PHAE1.470e-7350.64Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JI36_9PHAE5.040e-7241.56Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5KTY6_9PHAE6.290e-7248.76Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LED5_ECTSI2.460e-6849.57EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
A0A6H5JMP7_9PHAE2.910e-6850.00Chitin-binding type-4 domain-containing protein n=... [more]
A0A6H5L279_9PHAE5.890e-6747.39Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LED7_ECTSI2.000e-6649.80EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig96contigF-serratus_M_contig96:543819..549732 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score313.5
Seed ortholog evalue1.2e-82
Seed eggNOG ortholog2880.D7FSZ8
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Fungal-type cellulose-binding domain
EggNOG OGs2CZUJ@1,2SBQR@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons8
Model size1032
Cds size1032
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig96.20919.1prot_F-serratus_M_contig96.20919.1Fucus serratus malepolypeptideF-serratus_M_contig96 543819..549732 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932727.2965336-CDS-F-serratus_M_contig96:543818..5439261622932727.2965336-CDS-F-serratus_M_contig96:543818..543926Fucus serratus maleCDSF-serratus_M_contig96 543819..543926 +
1690964443.5241668-CDS-F-serratus_M_contig96:543818..5439261690964443.5241668-CDS-F-serratus_M_contig96:543818..543926Fucus serratus maleCDSF-serratus_M_contig96 543819..543926 +
1622932727.311895-CDS-F-serratus_M_contig96:544395..5445121622932727.311895-CDS-F-serratus_M_contig96:544395..544512Fucus serratus maleCDSF-serratus_M_contig96 544396..544512 +
1690964443.5347457-CDS-F-serratus_M_contig96:544395..5445121690964443.5347457-CDS-F-serratus_M_contig96:544395..544512Fucus serratus maleCDSF-serratus_M_contig96 544396..544512 +
1622932727.358455-CDS-F-serratus_M_contig96:547235..5473891622932727.358455-CDS-F-serratus_M_contig96:547235..547389Fucus serratus maleCDSF-serratus_M_contig96 547236..547389 +
1690964443.5436366-CDS-F-serratus_M_contig96:547235..5473891690964443.5436366-CDS-F-serratus_M_contig96:547235..547389Fucus serratus maleCDSF-serratus_M_contig96 547236..547389 +
1622932727.417678-CDS-F-serratus_M_contig96:547592..5477361622932727.417678-CDS-F-serratus_M_contig96:547592..547736Fucus serratus maleCDSF-serratus_M_contig96 547593..547736 +
1690964443.5534487-CDS-F-serratus_M_contig96:547592..5477361690964443.5534487-CDS-F-serratus_M_contig96:547592..547736Fucus serratus maleCDSF-serratus_M_contig96 547593..547736 +
1622932727.43532-CDS-F-serratus_M_contig96:547953..5481271622932727.43532-CDS-F-serratus_M_contig96:547953..548127Fucus serratus maleCDSF-serratus_M_contig96 547954..548127 +
1690964443.5634468-CDS-F-serratus_M_contig96:547953..5481271690964443.5634468-CDS-F-serratus_M_contig96:547953..548127Fucus serratus maleCDSF-serratus_M_contig96 547954..548127 +
1622932727.4558563-CDS-F-serratus_M_contig96:548605..5488041622932727.4558563-CDS-F-serratus_M_contig96:548605..548804Fucus serratus maleCDSF-serratus_M_contig96 548606..548804 +
1690964443.5757113-CDS-F-serratus_M_contig96:548605..5488041690964443.5757113-CDS-F-serratus_M_contig96:548605..548804Fucus serratus maleCDSF-serratus_M_contig96 548606..548804 +
1622932727.4809592-CDS-F-serratus_M_contig96:549181..5492751622932727.4809592-CDS-F-serratus_M_contig96:549181..549275Fucus serratus maleCDSF-serratus_M_contig96 549182..549275 +
1690964443.587449-CDS-F-serratus_M_contig96:549181..5492751690964443.587449-CDS-F-serratus_M_contig96:549181..549275Fucus serratus maleCDSF-serratus_M_contig96 549182..549275 +
1622932727.4943414-CDS-F-serratus_M_contig96:549690..5497321622932727.4943414-CDS-F-serratus_M_contig96:549690..549732Fucus serratus maleCDSF-serratus_M_contig96 549691..549732 +
1690964443.600966-CDS-F-serratus_M_contig96:549690..5497321690964443.600966-CDS-F-serratus_M_contig96:549690..549732Fucus serratus maleCDSF-serratus_M_contig96 549691..549732 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig96.20919.1

>prot_F-serratus_M_contig96.20919.1 ID=prot_F-serratus_M_contig96.20919.1|Name=mRNA_F-serratus_M_contig96.20919.1|organism=Fucus serratus male|type=polypeptide|length=344bp
GGTSFPLFWAEHAENGNYLEPQEISVRHGVCGDPKQRTEEEWNRYSTPNS
IWPIQKTLEKGSVMEVTVMMNAYHWGHLEFFLCDAAKLEDPGGVVTQECL
NMNPLTRAEGDNDNSPIDPDYSGRYYVDPECHKDETDQGSLTPEDVEDEY
YLLHMRYQLPSQLVCEHCILQMVYYTGNTCNHVGYDEFDPPSWPSECAPD
KDNWIRSNLKICGEGDKYPEEFYSCSDISITENGEPNPTPAPSEPISDCL
DPVELFEQCGGEDWQGSECCRDGFECVFESESYSEVSSSRARPDVFDPPT
CSEEWGQCGGSTWEGPTCCWPGTTCVEKKPTYSQCRPDDEDRL*
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mRNA from alignment at F-serratus_M_contig96:543819..549732+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig96.20919.1 ID=mRNA_F-serratus_M_contig96.20919.1|Name=mRNA_F-serratus_M_contig96.20919.1|organism=Fucus serratus male|type=mRNA|length=5914bp|location=Sequence derived from alignment at F-serratus_M_contig96:543819..549732+ (Fucus serratus male)
GGTGGGACCTCATTTCCTCTATTCTGGGCCGAGCATGCGGAGAATGGTAA
CTACCTAGAACCTCAGGAAATTTCCGTTCGCCACGGTGTCTGTGGCGATC
CCAAACAGGTTCGACAACTTGTTCTAAAGTAGGATTTGTGTTGTTTCTTT
CGTAACGGAAAGCGTGGGAACGTGAGTAAGTAAAATTCAACCATTGGTTG
ACGAGTTGTAAGAGTGCTGAACTTGCATCGCGATAAAAATGGTAAGGCGT
GAACCGGGGAGAGATGGGAAGATCCTTTGTGACCACAGGCAGGATGGTAA
TTAGAGGTCCATCGGCTTTAAGTGTAATTAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAGTCGGTTGTACTGTACTATTAATAACAACAACTGATGATGTA
CTCCAACAACTGTACTACAACAAACACCGGTACTGTACTGTACTGTATTA
CTGGGAGAAGAGTGCGTTGAAATTGGATCACAGAAGATTGTGACGCAGAA
AAGAGACTATTTAGGCGACCTTAGACTCCGATTCGCCAAGCTGCACCCGC
TCGATACTCTCTTTGCTTACTGCGCAGCGCACGGAAGAAGAATGGAACCG
ATACAGTACCCCAAACTCCATTTGGCCTATCCAGAAGACGCTCGAGAAGG
GCTCGGTGATGGAAGTAACGGTTATGATGAACGCCTATCATTGGGTAAGA
AGCTAGATCTATGAAGTTAGAGCCATGCCGTGTAGTATATATATGATGTG
ATCAAAAAGGCGATACTCTCAAGTCACTCAAAGAACGCCAACACTTGAGA
TCGCCGGCTTGTAAGTGGGGGTAGGAAATTCCTCATCATCAATCAGAAGA
TCAGATGGTGCCACTTTATTTATTTCCCCGTGTCTGCGTCCTACCCATCC
TTTTTTGTATTTTGTTTATGTTGATATTTCATATTTCTTCAGGCAGTCGC
GTTGTTTGCCTTGTTCTTATATGTCTGCATGCTCGCTGGTTGGAGCTTTG
TAGATGCCCCCCTGATACCTTTCTGTCCAGCAGACCACGTAGTACCGAAT
TGGCAGCCGCGTAGTGCATTATTAGTCTACTGGGTGTGGTTGAGGGTCGA
TCGTTCAATAATAAAGTGAACACAGCACACACCCGCACATCATAGACAAG
AAAGTATGGGTTCATTCCGTAGATGTCAACCCAGAAGATCTATTAATAAT
AGAGTATACAAGAGTTCCGGACGTTGGGGCCTATCGACCCCCCCGTCCTC
AGTTGTGGGAAATGCTTTGGTTGTGATTGGTGATGGTATTATAGAGAGTG
TGAACGTGAAGAACCGTTACCAAGGGGCACGCGTCTCAACACGGAGGGCA
AACCGTGAACCGGAAGATGGTATTCGGTGGAAATTTGTACATGGTCGAGT
AGTTGTGGTCAGATAGTACGGGACAAAATGGTTGGCGTCATCTCCCGCGG
ATGATGTATGAAGTTGTGCGATGCGGGAGGGTGTCGGTTTGTAAGGACGA
CTCCTCGTTGATGATCTCACTAAAAATAATGCACACGCAGACACCTCGAG
TAGACGTTCGCTTTGAACGTTATAGGGGCAACACGACGATGGCTTCACGA
CAAACAGGACGCTACGATGCGTTTCGATAGAAAAGAGAAATATTCCGTCG
ATCCTATTGCCCACAGAAATGGACATGCAGGCACGTGGGGTAGACGTACG
CTGTGAATGGTACAGCGACCCCGGGAACACAAACAGTACGCAACATGTAG
AGTTTTTGTCCCTACAGCCAATGTTCAGATTTTTACTGTGTAGTAGTACC
GGTCGACCCCGGTAGCTCAGTAGGCAGGCACCTCGTAACCTTCTGACACG
TTGGGACGTGAGTTCGATCCCGGCAAACGGGATTTTTCTCACTAAAAACT
AAAAAACCAAACTAAAAATGCCCAACGGGTGGAGAACGATTAATTCGTTA
GTACTCAAAATGAATAAAATTCGACTTCACGGTCGACGAGGGAAAGGAAT
GGCTGAATCCTTCTCGCGACAAAAATCAAGGCACGCACCGCAGAAGGAAG
GTGGATGAAAAATCCTGTGTGACCTTCCTCCTGTGTGACCCCGGCTGGTA
CGTCCAACGAACTTGATGTCCAGAATGGATGGGAAGAAAACACAAAAAAA
ACACACAGTAGTAACTAAGTCTGCTTACATGGTGATTAATGTAAGTGTAC
TTTTTCTGAACTTGTTATTTTTAGGAACCCGTGTCATATTTTTTGGCAAG
TGTTGGAACTTTCTCTGGGTCTTTTTATTTTATCTTATTTGCTTTCTGTA
CCTTAGTTTGGGGTAGCCTGTGACCACGGAAATTCGTTTCTTTGCCTTGA
AAGAGAAGGTACTGTTGGATAGAGGTCAGAACGGTGTAATATACGTGGTT
GCCGGTTTTTTATGTGAAGACAACAACAGCAACAACTGCTGCTGCGGACC
TCTGAGCTAATATGCATAACTTGTTCGATGGTGATGCAGGGGTACCTCTG
AAAGATGCAGAACTTTTGTAAAGATAAAGCAAGCTCTCCACATCTGAAGC
TCACGCGTAAGAGCTAACCTCGGTGCGTAACTTGCAGGGGTGGCTCGAGA
GATTAATGCGATCCGGTAGGCGAAGACGGAAGAAAAAACGATTTAATCGT
GTTTTCAGGCTGAATTTCGCCCCAAACGTCTTGCCTTGAGAAGGGGATGG
AAAGAACAATGGTTGAACTCTGCGCTCTGAGCGCTTCAGATCTAAAGATT
AAGGTTGAGGATAATATTACATACCTCTATTAATAGAAAGAAAGCAGAGA
GGGAAGCGAAGGGTGCTCAGTCAGGTCTTACAGTATTAATAAGTGAGAAT
GGTATAAAGAGTGTATCCTGTTTGTCGCGGCTGATCAGAGGTTTTCGTAA
CGAGAATCATTGATCCCTTAATACCTCAACACCTTAACGCCCTATTCTTG
GGAGGACCAGTACGAGTGCCATATAATATGATTATTAATATTACAATTAA
TAGGATGGCAGGGTCGGATTACGAGGTTTTGTGTCTGATCAGAGGTTTTG
TGATGATAGATATTAAGTATATGCGTGGTTATGTGCACACACACGTGTGC
CGCCTTTGTCGCGTCTGGTCGGAGGTTTTCGTCATAAGTATCATTGATCC
CCTCTTGGGAGGATCAATGCGAGTAGCATAGAAGGACTAGGATGATAGGG
TCGGATTGCGCGACTATTAAGTGCAATTTAGTAAATACACATAGACACAC
ACAGCCGGATTGCGCCGTTATTTGCAGTTTCATAAACACACACATGCGTA
CATATTTCCATCAACGCAGGCTATGTTTTACTTGAGGGAACGCACTATAT
CCAATATCCACCCTTTTCTGTTTCCCCTTTCATTTTCTGGATCTTCTTCG
ACGCATTTTTTGGCAAGGGCCACTTGGAGTTCTTCCTCTGCGATGCCGCC
AAACTTGAAGATCCGGGCGGTGTGGTGACTCAGGAATGCCTCAACATGAA
TCCCCTCACTCGCGCTGAAGGCGACAATGATAATAGTCCCATCGACCCTG
ACTACTCCGGTCGCTATTACGGTACGCAACTCCGGTCGCTATTATAACGG
TGTGCGCCATTGAAACGCGTTCTCAATTAGTATTGTACAGAGTCGTAGTC
GTCACTACTGGTACCCGACTCCTCGCGTAATATTAAAGAACACTATAGAT
CACTACTATAGCCCTTCTTGACCAGCGATTTCTCTCATTCCCCCAATTCC
GATCCCACGTCTGGTGCCCCCAAGTCGACCCGGAGTGTCACAAAGACGAG
ACTGACCAAGGAAGCCTCACGCCGGAAGATGTGGAGGACGAGTATTACTT
GCTTCACATGCGTTACCAGCTCCCCAGTCAGCTTGTTTGCGAGCACTGCA
TCCTGCAGATGGTGTACTGTGAGTCCGTCGACTCGGAATACCCTATTAGC
TCCCACTCTCTAAGTAAATATGTACTGCTGCACAGTGGGTTCATCGACTG
CGTCGCGTGTATGGCTTCCATTTCTAGCTAACGATCGAGCCATCTTACCC
TGTCTTCTTAGATGTGACGGCCTGCGACGCACTGTCTTCAAAGCATCCCT
CAACACGTCCAAATGTGTTTCTTAACCAAACCCAGATACGGGCAACACTT
GCAACCACGTTGGCTATGACGAGTTCGATCCACCGTCTTGGCCGTCGGAG
TGCGCCCCAGACAAGGACAACTGGATCAGGTCCAACCTCAAAATCTGCGG
CGAAGGGGACAAATATCCGGAGGAATTCTATTCGTGCTCTGATATTAGTA
TCACCGAGAGTGAGGACCTTAAACCTTAAACCTTAAACCTTAAACCACCT
GTAGCTGCTGCACTGCTTGCACAATGTTGATATCAAGACCAAACAAGGAT
GCGTGTGTCTGGTTCATGTACTTATACGCGCTACGTGGCAAAGCTTGCGC
AACTTCACCAGATCGTCTGTTATATTACACAGGGGAAGTTGAACATAATT
GTGTATGCAACATTTAGAGTCGGATTGGACTTACGCCGGTATCTACCTCT
TATATGCCTGACGGAGAGGCTAAGCTTTTGAAAGTGCTCATACGATCAAT
ATTTGTTGAGTCAAACACTTTAGAAACACATAGATACGTGCCTATATTTT
TGCTTTTTTTGCCTAACAACTCTTTTCCGGCAACACGAGCTATCTCCTTG
AGCCACGCCCATCGGCGATTTTCTCTGATACTGTATCTGGTATTGTCTCG
TTTCCCAACGACGAACACTCCGCATTCGGGCATTCAGACGGAGAGCCTAA
CCCGACGCCCGCGCCCAGCGAGCCCATCTCGGACTGCCTTGATCCCGTGG
AACTATTCGAGCAGTGTGGGGGAGAAGACTGGCAGGGATCGGAGTGCTGC
CGCGACGGATTCGAATGCGTGTTCGAAAGCGAAAGCTACTCGGAAGTGAG
TTCATCCCGTGCTCGGCCCGACGTTTTTGACCCTCCGTGCTCAAGGAGCG
ATCGCTAAAAGTCTCGTCATGAACTTTTCAATCAGGCACACGCATGCGTG
GCAAGAGCGGAGTTGCCGGGCTTCCACCCGCACGCGTGGATCTCTGTCAC
ACTTTAGCTTTCGTCGCCGTGTCTCACCGGTTGGGTTCGTGCTGCTGCCA
CCAAACAATCGTCTTGGCCGAACCATACGCACAGGATGGACAGAAAGAAT
ACGCCCCAACTCCCCCCCCACACACACGCACGTTTTCCTCACTTTATTGT
GTTGTCGTGCGCCTCTTTTTATCTCGATTCGTTCGTTCCAAAAGCATTGT
ATGTTGCTTGTCCCGGTGTGTGTGTGGCTCGCCCCCCGCGCAGTGCGATC
TCGTCGATGGCAGCACGTGTAGCGAGGAATGGGGCCAGTGCGGGGGCTCT
ACTTGGGAAGGCCCGACCTGCTGCTGGCCAGGTACCACTTGCGTCGAGAA
GAAACCGGTGAGTGGGGTGGAATTCATCTCAAGTGTGGAGTGGCACACTG
CTGTATTTCTCTGACAATCACGAATAATACCTCTGGGGAAGTCTCAAGTA
GAAGTCACACTCACAAACACAACACGTACAGGGAATCCAGTGTGGAGTGG
CACACCGCATTTATTTGCCAATCAAGAATAATTCCCCTAGGGAAATAGAA
AGCCGCGCATGCGCACACGCACGTACAGGCACGCTCACACACGTACAGAG
ATGGGCACCCGTGACGCCATTTCACCAGGCCAATTACAACTTATTACCCC
CTTTGTCGTCACATGTTTCTTAACACCCATGTCCGCCACGCATCCTAAGC
TTGCGCACCTATCCCCGTGCTTCTACCCCATGCCGCGTCTTCTCATGACT
CGCCTCCCATCAATTTACTCAGACCTACTCCCAATGCAGGCCAGACGATG
AGGACAGACTATGA
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Coding sequence (CDS) from alignment at F-serratus_M_contig96:543819..549732+

>mRNA_F-serratus_M_contig96.20919.1 ID=mRNA_F-serratus_M_contig96.20919.1|Name=mRNA_F-serratus_M_contig96.20919.1|organism=Fucus serratus male|type=CDS|length=2064bp|location=Sequence derived from alignment at F-serratus_M_contig96:543819..549732+ (Fucus serratus male)
GGTGGGACCTCATTTCCTCTATTCTGGGCCGAGCATGCGGAGAATGGTAA
CTACCTAGAACCTCAGGAAATTTCCGTTCGCCACGGTGTCTGTGGCGATC
CCAAACAGGGTGGGACCTCATTTCCTCTATTCTGGGCCGAGCATGCGGAG
AATGGTAACTACCTAGAACCTCAGGAAATTTCCGTTCGCCACGGTGTCTG
TGGCGATCCCAAACAGCGCACGGAAGAAGAATGGAACCGATACAGTACCC
CAAACTCCATTTGGCCTATCCAGAAGACGCTCGAGAAGGGCTCGGTGATG
GAAGTAACGGTTATGATGAACGCCTATCATTGGCGCACGGAAGAAGAATG
GAACCGATACAGTACCCCAAACTCCATTTGGCCTATCCAGAAGACGCTCG
AGAAGGGCTCGGTGATGGAAGTAACGGTTATGATGAACGCCTATCATTGG
GGCCACTTGGAGTTCTTCCTCTGCGATGCCGCCAAACTTGAAGATCCGGG
CGGTGTGGTGACTCAGGAATGCCTCAACATGAATCCCCTCACTCGCGCTG
AAGGCGACAATGATAATAGTCCCATCGACCCTGACTACTCCGGTCGCTAT
TACGGGCCACTTGGAGTTCTTCCTCTGCGATGCCGCCAAACTTGAAGATC
CGGGCGGTGTGGTGACTCAGGAATGCCTCAACATGAATCCCCTCACTCGC
GCTGAAGGCGACAATGATAATAGTCCCATCGACCCTGACTACTCCGGTCG
CTATTACGTCGACCCGGAGTGTCACAAAGACGAGACTGACCAAGGAAGCC
TCACGCCGGAAGATGTGGAGGACGAGTATTACTTGCTTCACATGCGTTAC
CAGCTCCCCAGTCAGCTTGTTTGCGAGCACTGCATCCTGCAGATGGTGTA
CTTCGACCCGGAGTGTCACAAAGACGAGACTGACCAAGGAAGCCTCACGC
CGGAAGATGTGGAGGACGAGTATTACTTGCTTCACATGCGTTACCAGCTC
CCCAGTCAGCTTGTTTGCGAGCACTGCATCCTGCAGATGGTGTACTATAC
GGGCAACACTTGCAACCACGTTGGCTATGACGAGTTCGATCCACCGTCTT
GGCCGTCGGAGTGCGCCCCAGACAAGGACAACTGGATCAGGTCCAACCTC
AAAATCTGCGGCGAAGGGGACAAATATCCGGAGGAATTCTATTCGTGCTC
TGATATTAGTATCACCGAGAATACGGGCAACACTTGCAACCACGTTGGCT
ATGACGAGTTCGATCCACCGTCTTGGCCGTCGGAGTGCGCCCCAGACAAG
GACAACTGGATCAGGTCCAACCTCAAAATCTGCGGCGAAGGGGACAAATA
TCCGGAGGAATTCTATTCGTGCTCTGATATTAGTATCACCGAGAACGGAG
AGCCTAACCCGACGCCCGCGCCCAGCGAGCCCATCTCGGACTGCCTTGAT
CCCGTGGAACTATTCGAGCAGTGTGGGGGAGAAGACTGGCAGGGATCGGA
GTGCTGCCGCGACGGATTCGAATGCGTGTTCGAAAGCGAAAGCTACTCGG
AAGTGAGTTCATCCCGTGCTCGGCCCGACGTTTTTGACCCTCCACGGAGA
GCCTAACCCGACGCCCGCGCCCAGCGAGCCCATCTCGGACTGCCTTGATC
CCGTGGAACTATTCGAGCAGTGTGGGGGAGAAGACTGGCAGGGATCGGAG
TGCTGCCGCGACGGATTCGAATGCGTGTTCGAAAGCGAAAGCTACTCGGA
AGTGAGTTCATCCCGTGCTCGGCCCGACGTTTTTGACCCTCCCACGTGTA
GCGAGGAATGGGGCCAGTGCGGGGGCTCTACTTGGGAAGGCCCGACCTGC
TGCTGGCCAGGTACCACTTGCGTCGAGAAGAAACCGCACGTGTAGCGAGG
AATGGGGCCAGTGCGGGGGCTCTACTTGGGAAGGCCCGACCTGCTGCTGG
CCAGGTACCACTTGCGTCGAGAAGAAACCGACCTACTCCCAATGCAGGCC
AGACGATGAGGACAGACTATGAACCTACTCCCAATGCAGGCCAGACGATG
AGGACAGACTATGA
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