mRNA_F-serratus_M_contig950.20868.1 (mRNA) Fucus serratus male
Overview
Homology
BLAST of mRNA_F-serratus_M_contig950.20868.1 vs. uniprot
Match: A0A6H5LN99_9PHAE (Peptidase A1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LN99_9PHAE) HSP 1 Score: 263 bits (672), Expect = 1.970e-73 Identity = 140/274 (51.09%), Postives = 180/274 (65.69%), Query Frame = 1 Query: 1 MKDVVRLGGKELEVDQEEQDELSSPNA------VNFGCIRRQSGMFDTQAADGIIGLAPHRDSVLWQMTDLTSPDSKQFSLCFSPRGGNLVMGGFDPMLLEPGEYHKYTPAKVNGGWFSVKVEGVLLGGTQIVTQKTLEIFELGTGVIVDSGTTDTYLPQAIASEWHSAWLATAKTPFRNCIQENFCMSLTNEEVKTLPTLSFTLAGGVTLSLTAEEYMEAGPRA-EGGRVFYAPRIYLTEYAGGVLGANMMMNRNVLFDASNERVGFAKARCD 801 M DV RLGG+ L E+D N ++FGCIR+Q GMFD Q DGIIG+ P+ S W +T SP ++FS+CFS GGNLV+GG+DP LL PG H+YT A+ G+F+V+V GV LGG IVT +TLE+F LGTG IVDSGTTD YLP +A + AW A P+ C +FC+ LT E LP +SFTLA GV + ++ +Y+E A + + +YAPRIYLTE G VLGAN+M++RNVLFD +NER+GFA ARC+ Sbjct: 250 MVDVFRLGGEGLS----EEDGGGEGNGGYGWPKLSFGCIRKQLGMFDKQEPDGIIGMGPNVISPAWSLTARESPQDRKFSICFSENGGNLVLGGYDPELLVPGASHQYTTAQFARGFFAVEVLGVALGGRSIVTAETLELFSLGTGTIVDSGTTDMYLPVEVADAFSEAWEAATGEPYAMCPGNSFCLKLTPPEAAELPVVSFTLADGVEVRVSPLQYLEKKETAGKPHKTYYAPRIYLTESTGAVLGANVMLDRNVLFDLANERIGFADARCE 519
BLAST of mRNA_F-serratus_M_contig950.20868.1 vs. uniprot
Match: A0A6H5JRT4_9PHAE (Peptidase A1 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JRT4_9PHAE) HSP 1 Score: 219 bits (557), Expect = 2.300e-58 Identity = 115/271 (42.44%), Postives = 169/271 (62.36%), Query Frame = 1 Query: 1 MKDVVRLGGKELEVDQEEQ---DELSSPNAVNFGCIRRQSGMFDTQAADGIIGLAPHRDSVLWQMTDLTSPDSKQFSLCFSPRGGNLVMGGFDPMLLEPGEYHKYTPAKVNGGWFSVKVEGVLLGGTQIVTQKTLEIFELGTGVIVDSGTTDTYLPQAIASEWHSAWLATAKTPFRNCIQENFCMSLTNEEVKTLPTLSFTLAGGVTLSLTAEEYMEAGPRAEGGRVFYAPRIYLTEYAGGVLGANMMMNRNVLFDASNERVGFAKARCDY 804 ++DV+ +G EL + Q E+ DE + FGCI Q+G+F TQ ADGI+G++ +++WQ+ + FSLCF GG +V+GG+D L +PG YTP+ + GWF+VKV + + Q+ K IF+ G G+IVDSGTTDTYLP+++A + +AW +P+ NC +FCM LT+ E++ LPT++ + GG+ +++ YM+A + YAPRIYLTE GGVLGAN+M++ NV+FD N VGFA+ CDY Sbjct: 213 VEDVLWVG--ELTLQQSEKINHDESAYAVEFMFGCIESQTGLFKTQLADGIMGMSADSHTLVWQLAKAGKIKERTFSLCFGKNGGTMVLGGYDNRLNKPGHEMVYTPSTKSSGWFTVKVTDITVN--QVSIAKDAAIFQKGKGIIVDSGTTDTYLPKSVAKGFSAAWERATGSPYANCKDNHFCMILTSAELEALPTITIHMDGGLEVNVRPSGYMDALGKDNA----YAPRIYLTESMGGVLGANVMLDHNVVFDFDNHSVGFAEGVCDY 475
BLAST of mRNA_F-serratus_M_contig950.20868.1 vs. uniprot
Match: A0A6H5LNK8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LNK8_9PHAE) HSP 1 Score: 199 bits (507), Expect = 1.270e-53 Identity = 120/295 (40.68%), Postives = 167/295 (56.61%), Query Frame = 1 Query: 43 DQEEQDELSSPNAVNFGCIRRQSGMFDTQAADGIIGLAPHRDSVLWQMTDLTSPDSKQFSLCFSPRGGNLVMGGFDPMLLEPGEYHKYTPAKVNGGWFSVKVEGVLLGGTQIVTQKTLEIFELGTGVIVDSGTTDTYLPQAIASEWHSAWLATAKTPFRNCIQENFCMSLTNEEVKTLPTLSFTLAGGVTLSLTAEEYMEAGPRAEGGRVFYAPRIYLTEYAGGVLGANMMMNRNVLFDASNERVGFAKARCDYDDSDRRARARERKGANVPGPAKPNDFQINVPVDPVPKNVEE 927 D ++ D+ + FGCI +G+F TQ ADGI+GL +++ Q+ ++FSLCFS GG +V+GG+DP+L +PG +YTP+ +VKV V L G I T + +F+ GTG+ V SGTTD YLP+A+A + +AW A +P+ C FCM+ T +++TLP L+ + GGV +++ E YM+A E YAPRIYLTE GG LGA + + NV+FD N VGFA CDY +D R R GA GPA + + NV K VEE Sbjct: 210 DSQKHDDSAFSVDFTFGCIESLTGLFRTQLADGIMGLNADSRTLITQLATAGKISERKFSLCFSETGGTMVIGGYDPLLNKPGSEMQYTPSTGETSAPTVKVTDVTLNGVSITTDAS--VFQKGTGIKVVSGTTDMYLPRAVAEGFSAAWEAATGSPYATCKSNEFCMTRTTADLETLPVLTIHMDGGVEVNVQPEAYMDASSDDENA---YAPRIYLTESMGGELGAILFRDHNVVFDYDNHVVGFADGACDYH-ADSRGSDGGRAGAKG-GPAV--EAEANVDCVTAVKRVEE 495
BLAST of mRNA_F-serratus_M_contig950.20868.1 vs. uniprot
Match: A0A835ZHP7_9STRA (Aspartic peptidase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHP7_9STRA) HSP 1 Score: 177 bits (448), Expect = 1.560e-45 Identity = 98/239 (41.00%), Postives = 140/239 (58.58%), Query Frame = 1 Query: 88 FGCIRRQSGMFDTQAADGIIGLAPHRDSVLWQMTDLTSPDSKQFSLCFSPRGGNLVMGGFDPMLLEPGEYHKYTPAKVNGGWFSVKVEGVLLGGTQIVTQKTLEIFELGTGVIVDSGTTDTYLPQAIASEWHSAWLATAKTPFRNCIQENFCMSLTNEEVKTLPTLSFTLAGGVTLSLTAEEYMEAGPRAEGGRVFYAPRIYLTEYAGGVLGANMMMNRNVLFDASNERVGFAKARCDY 804 FGCI Q+G+F+TQ ADGI+G++ +++WQ+ ++FSLCF GG +V+GG +P+L +YTP + GWF+V ++ +L+GG I + G GVIVDSGTTDTYLP A A + + W A + +N M L+ + LPT +F AGGV + + E YM+ +G Y PR+YL E G VLGAN M + +V+FD +N+RVGFA A CD+ Sbjct: 129 FGCINSQTGLFNTQLADGIMGMSVSEFTLVWQLHQKGLLAQEKFSLCFDYGGGVMVLGGVEPLLRTAPM--QYTPNLHDEGWFTVDLQDILIGGESINVDPAQ--YNRGKGVIVDSGTTDTYLPSACADGFRAQWQALTGMAY-----DNKPMKLSKAQFAALPTFTFVFAGGVRVDVKPEAYMDVAADHDGAG--YTPRMYLDERDGAVLGANFMRDHDVVFDHANKRVGFAPANCDW 356
BLAST of mRNA_F-serratus_M_contig950.20868.1 vs. uniprot
Match: A0A8J2SW55_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SW55_9STRA) HSP 1 Score: 161 bits (407), Expect = 2.560e-40 Identity = 93/239 (38.91%), Postives = 136/239 (56.90%), Query Frame = 1 Query: 88 FGCIRRQSGMFDTQAADGIIGLAPHRDSVLWQMTDLTSPDSKQFSLCFSPRGGNLVMGGFDPMLLEPGEYHKYTPAKVNGGWFSVKVEGVLLGGTQIVTQKTLEIFELGTGVIVDSGTTDTYLPQAIASEWHSAWLATAKTPFRNCIQENFCMSLTNEEVKTLPTLSFTLAGGVTLSLTAEEYMEAGPRAEGGRVFYAPRIYLTEYAGGVLGANMMMNRNVLFDASNERVGFAKARCDY 804 FGC ++G+F TQ ADGI+G++ H +++ M F++CF GG + +GG D + + E ++ P N GWF+V+++ VLL G I ++ + G G IVDSGTTDTYLP+ A ++ AW A A P N ++ T + PT+++ AGGV + + + YME +A GR + PR+YLTE +G VLGAN M + + FDA RVGFA+A CDY Sbjct: 213 FGCQTYETGLFRTQKADGIMGMSMHAQTLVPTMRSANKLGHNSFAMCFMQGGGTMALGGVDTRIHK--EPMQFVPLAKNSGWFTVQLKDVLLNGKSIGVPEST--WNTGKGTIVDSGTTDTYLPRRAAEQFKRAWHA-AMGPSPK--YANSKLAYTAAQAAKFPTITYVFAGGVKVDVEGKAYME---KAGAGR--WVPRVYLTEASGTVLGANFMEDHDCFFDAERRRVGFARADCDY 439
BLAST of mRNA_F-serratus_M_contig950.20868.1 vs. uniprot
Match: A0A7S2WCI1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WCI1_9STRA) HSP 1 Score: 157 bits (398), Expect = 2.440e-38 Identity = 100/274 (36.50%), Postives = 150/274 (54.74%), Query Frame = 1 Query: 1 MKDVVRLGGKELEVDQEEQDELSSPNAVNF--GCIRRQSGMFDTQAADGIIGLAPHRDSVLWQMTDLTSPDSKQFSLCFSPRGGNLVMGGFDPMLLEPGEYHKYTPAKVNGGWFSVKVEGVLLGGTQIVTQKTLEIFELGTGVIVDSGTTDTYLPQAIASEWHSAWLATAKTPFRNCIQENFCMSLTNEEVKTLPTLSFTLAGG----VTLSLTAEEYMEAGPRAEGGRVFYAPRIYLTEYAGGVLGANMMMNRNVLFDASNERVGFAKARCDY 804 M+DV+ LGG + + + AV F GC ++G+F TQ ADGI+GL+ +++ Q+ + ++K F+LCF GG + +GG D + + E K+ P + GWF+VK++G+ +G + + G GVIVDSGTTDTYLP+ A + AW + + + N M+L E +PT++F G V + + YME + G Y PR+YLTE +G VLGAN M + NVLFDA ++RVGFA++ C Y Sbjct: 173 MEDVLWLGGSSSDT-HDPASSIGHALAVRFMFGCQFSETGLFRTQRADGIMGLSSSPTTLIPQVKNANLIEAKTFALCFMKGGGMMTIGGADSAIHQ--EPMKFVPLAKSSGWFTVKLKGLRVGDVSLSVSGNS--YNSGKGVIVDSGTTDTYLPKKAAGAFKKAWRSLSGREYGNGK-----MTLDAENFARIPTITFVFQGAHGEDVEVHMRPNAYME-----QQGSDKYVPRVYLTEGSGMVLGANFMQDHNVLFDAEHKRVGFARSDCSY 431
BLAST of mRNA_F-serratus_M_contig950.20868.1 vs. uniprot
Match: A0A7S2B1E9_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2B1E9_9STRA) HSP 1 Score: 155 bits (391), Expect = 4.200e-38 Identity = 89/244 (36.48%), Postives = 136/244 (55.74%), Query Frame = 1 Query: 88 FGCIRRQSGMFDTQAADGIIGLAPHRDSVLWQMTDLTSPDSKQFSLCFSPRGGNLVMGGFDPMLLEPGEYHKYTPAKVNGGWFSVKVEGVLLGGTQIVTQKTLEIFELGTGVIVDSGTTDTYLPQAIASEWHSAWLATAKTPFRNCIQENFCMSLTNEEVKTLPTLSFTLAG----GVTLSLTAEEYMEAGPRAEGGRVFYAPRIYLTEYAGGVLGANMMMNRNVLFDASNERVGFAKARCDYD 807 FGC ++G+F TQ ADGI+GL+ + +++ QM ++ FSLCF GG + +GG DP + P + GWF+V ++ V +GGT++ Q + ++ G GVIVDSGTTDTYLP+ +A ++ AW + N M+ ++E+ LP +SF + + + + YME + Y PR+Y+ E G VLGAN M + NVLFD N+RVGFA++ C+Y+ Sbjct: 62 FGCQFSETGLFRTQKADGIMGLSANSLTLVPQMKSQRKNSNQVFSLCFMKGGGIMTIGGADPAIQSSPMV--LVPTTKSSGWFTVHLDYVSVGGTKLDVQDS--VYNSGKGVIVDSGTTDTYLPRKMAGQFKKAWKDIVGKEYGNTK-----MTFSDEQFAKLPVISFAFKDVNGKKIEIGMHPDAYMEKSAKQ------YVPRVYVNEGQGAVLGANFMQDYNVLFDQDNKRVGFARSNCNYE 290
BLAST of mRNA_F-serratus_M_contig950.20868.1 vs. uniprot
Match: A0A835ZJF3_9STRA (Aspartic peptidase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZJF3_9STRA) HSP 1 Score: 158 bits (400), Expect = 1.260e-37 Identity = 93/249 (37.35%), Postives = 132/249 (53.01%), Query Frame = 1 Query: 88 FGCIRRQSGMFDTQAADGIIGLAPHRDSVLWQMTDLTSPDSKQFSLCFSPRGGNLVMGGFDPMLLEPGEYHKYTPAKVNGGWFSVKVEGVLLGGTQIVTQKTLEIFELGTGVIVDSGTTDTYLPQAIASEWHSAWLATAKTPFRNCIQENFCMSLTNEEVKTLPTLSFTLAGGVTLSLTAEEYMEAGPRAEGGRVF----------YAPRIYLTEYAGGVLGANMMMNRNVLFDASNERVGFAKARCDY 804 FGCI Q+G+F+TQ ADGI+G++ +++W + + SLCF GG +V+GG DP+L ++TP+ GWF+V + V +GG I ++ G G IVDSGTTDTYLP+A A+ + +AW A + E+ L E+ LP L+F GG + + E YM A R+ Y R+YL E G VLGAN M + +V FD +N RVGFA A C++ Sbjct: 125 FGCIDSQTGLFNTQLADGIMGMSASESTLVWTLHRAHRVPALALSLCFGTGGGAMVLGGSDPLLHTAPM--QFTPSLKRTGWFTVDLIDVQIGGASIGAPAA--VYARGKGAIVDSGTTDTYLPEACAARFRAAWRAATGRDY----SESAPQRLARAELAALPALTFVFRGGARVDVLPEAYMVARAALTLTRLAASAQEKVGKSYVARVYLDEANGAVLGANFMRDHDVFFDQANSRVGFAPANCNW 365
BLAST of mRNA_F-serratus_M_contig950.20868.1 vs. uniprot
Match: A0A662XQY7_9STRA (Peptidase A1 domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XQY7_9STRA) HSP 1 Score: 146 bits (369), Expect = 3.350e-34 Identity = 102/314 (32.48%), Postives = 164/314 (52.23%), Query Frame = 1 Query: 1 MKDVVRLGGKELEVDQEEQDELSSPNAVNFGCIRRQSGMFDTQAADGIIGLAPHRDSVLWQMTDLTSPDSKQFSLCFSPRGGNLVMGGFDPMLLEPGE--YHKYTPAKVNGGWFSVKVEGVLLGGTQIVTQKTLEIFELGTGVIVDSGTTDTYLPQAIASEWHSAWLATAKTPFRNCIQENFCMSLTNEEVKTLPTLSFTL----AGGVTLSLTAEEYMEAGPRAEGGRVFYAPRIYLTEYAGGVLGANMMMNRNVLFDASNERVGFAKARCDYDDSDRRARARERKGANVPGPAKPNDFQINVPVDPVPKNVE 924 ++DVV LGG D+ +++ + FGC R ++G+F TQ ADGI+GL+ D ++ ++ S F+LCFS GG++ +G + + GE Y K + NG +++V+++ + +GG I + + G IVDSGTTD+YLP+A+ +E+ + A + + C T ++ TLPT+ F + G +TL + ++Y+ A + I+L+E+AGGV+GAN+MMNR+V+FD N+RVGF A C Y E AN + N+ VP PV +E Sbjct: 99 VEDVVYLGGDASFTDETLRNQYGTH--FQFGCQRSETGLFITQVADGIMGLSNSDDHIVAKLHRENKIPSNLFALCFSDLGGSMALGQPN-RIAHRGEISYAKIISDRSNGHFYNVRMKDIRIGGKSIEADEAA--YTRG-HFIVDSGTTDSYLPRALKNEFQKVFEEVAGHAYE--VSGAKCSGFTEADLATLPTIQFVMEAFDGGEMTLDIMPDQYLLHSDGA------FCGNIFLSEHAGGVIGANIMMNRDVIFDGGNQRVGFVDADCSYQKPATATPKHEDLNANASAEGEENNV---VPTTPVASPIE 395
BLAST of mRNA_F-serratus_M_contig950.20868.1 vs. uniprot
Match: A0A6G0WM48_9STRA (Peptidase A1 domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WM48_9STRA) HSP 1 Score: 144 bits (362), Expect = 1.750e-33 Identity = 92/269 (34.20%), Postives = 149/269 (55.39%), Query Frame = 1 Query: 31 ELEVDQEEQDELSSPNAVNFGCIRRQSGMFDTQAADGIIGLAPHRDSVLWQMTDLTSPDSKQFSLCFSPRGGNLVMGGFDPMLLEPGEYHKYTPAKVNG-GWFSVKVEGVLLGGTQIVTQKTLEIFELGTGVIVDSGTTDTYLPQAIASEWHSAWLATAKTPFRNCIQENFCMS---LTNEEVKTLPTLSFTLAG----GVTLSLTAEEYMEAGPRAEGGRVFYAPRIYLTEYAGGVLGANMMMNRNVLFDASNERVGFAKARCDYDDS 813 + ++D+ E LS+ FGC ++G+F TQ ADGI+G++ +++ ++ DS FSLCF+P+GG++ +G P+ E Y + GW++V++ + +GG I + T +I G VIVDSGTT +YLP A E+H+A F+ + + + + T ++V LPT+ + +AG V L++ E+Y++ Y I+L E AGG++GAN+MM+++ +FDA RVGFAKA CDY S Sbjct: 162 DAKLDRNESHPLST--RYKFGCQIVETGLFTTQVADGIMGISNRARNIVKKLFQEDKIDSNVFSLCFTPKGGSMSVG--TPLTSRHKEDLTYAKVSFDKTGWYAVEMREIRIGGVPIEIEST-QILNGGRKVIVDSGTTASYLPDVFADEFHNA--------FKLAVGKKYMIGGVGYTEDQVADLPTIEYVMAGVDGKDVVLTIPPEQYLKKKEDR------YFSTIHLEEAAGGIIGANLMMHQDFVFDADRFRVGFAKADCDYSGS 411 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig950.20868.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig950.20868.1 >prot_F-serratus_M_contig950.20868.1 ID=prot_F-serratus_M_contig950.20868.1|Name=mRNA_F-serratus_M_contig950.20868.1|organism=Fucus serratus male|type=polypeptide|length=535bp MKDVVRLGGKELEVDQEEQDELSSPNAVNFGCIRRQSGMFDTQAADGIIGback to top mRNA from alignment at F-serratus_M_contig950:120638..126912+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig950.20868.1 ID=mRNA_F-serratus_M_contig950.20868.1|Name=mRNA_F-serratus_M_contig950.20868.1|organism=Fucus serratus male|type=mRNA|length=6275bp|location=Sequence derived from alignment at F-serratus_M_contig950:120638..126912+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig950:120638..126912+ >mRNA_F-serratus_M_contig950.20868.1 ID=mRNA_F-serratus_M_contig950.20868.1|Name=mRNA_F-serratus_M_contig950.20868.1|organism=Fucus serratus male|type=CDS|length=3210bp|location=Sequence derived from alignment at F-serratus_M_contig950:120638..126912+ (Fucus serratus male)back to top |