mRNA_F-serratus_M_contig95.20855.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig95.20855.1
Unique NamemRNA_F-serratus_M_contig95.20855.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig95.20855.1 vs. uniprot
Match: D8LI88_ECTSI (Haloacid dehalogenase-like hydrolase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI88_ECTSI)

HSP 1 Score: 432 bits (1111), Expect = 6.730e-145
Identity = 228/356 (64.04%), Postives = 271/356 (76.12%), Query Frame = 1
Query:   82 LCLGLLPATVVAASSALGRAGHRSTYYHCYRRRPSVAFGWSSRLSSDDSAGERPTSPKPLQSAVKSGSVSR--PQEFSAAPSSLLASVEAVASDVDGTLTKQHSTVSKRTVAAVKAVLDSEVLFFPATGKTRAGMYEILGEEISSHLRAKNAPGVFIQGLVVYSGSGNEVLYERLLDASIVGEVASFCEEEGVSLIAYSGDSIVCSTKDEHTDEIAKYKEPMPEAVGPLVDAMARGLRIHKLILMDTKETIDRVRPKMKRVVGDHGTLTQALPGMLEVLPPGASKGNGVEILLKHLGIDPVRLMALGDAENDVDMLHLAGVGVCVGNASPPARTAARFVAPTNEEDGAAVALERIM 1143
            +CL LLP++   +S+A+ R   R TYYH        +FGW+                            S   P++ + AP+SLLA+VEAVASDVDGTLT    TV+ RT  A+KAVL+SE+ FFPATGKTR GMY+ILGE+I++HL+ K+ PGVFIQGLVVYSG+G+EVLYERLLD  IV +VASFCEE GVSLIAYSGD IVCS KD  TD+IA Y EPMP AVGPL DAMA GLR+HKLILMD+KE IDRVRP ++R++GD  T TQALP MLEVLP GASKG+GV++LLKHLGIDPVRLMALGDAENDV+ML LAGVGVCVGNASPPAR AARF+APTN  DG+AVA+E+++
Sbjct:   10 VCLRLLPSSGAVSSTAV-RGVQRGTYYHHRLHHRPASFGWTXXXXXXXXXXXXXXXXXXXXXXXXXXXXSNREPRQLADAPASLLATVEAVASDVDGTLTTPEVTVTPRTKDAIKAVLNSELAFFPATGKTRTGMYKILGEDIAAHLKTKDTPGVFIQGLVVYSGAGDEVLYERLLDVEIVSQVASFCEERGVSLIAYSGDEIVCSVKDAETDKIALYSEPMPSAVGPLTDAMAAGLRVHKLILMDSKEAIDRVRPDIERLIGDRATFTQALPDMLEVLPAGASKGHGVDVLLKHLGIDPVRLMALGDAENDVEMLRLAGVGVCVGNASPPARAAARFMAPTNANDGSAVAMEQLL 364          
BLAST of mRNA_F-serratus_M_contig95.20855.1 vs. uniprot
Match: A0A6H5KW38_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW38_9PHAE)

HSP 1 Score: 358 bits (920), Expect = 7.130e-118
Identity = 175/231 (75.76%), Postives = 201/231 (87.01%), Query Frame = 1
Query:  451 PATGKTRAGMYEILGEEISSHLRAKNAPGVFIQGLVVYSGSGNEVLYERLLDASIVGEVASFCEEEGVSLIAYSGDSIVCSTKDEHTDEIAKYKEPMPEAVGPLVDAMARGLRIHKLILMDTKETIDRVRPKMKRVVGDHGTLTQALPGMLEVLPPGASKGNGVEILLKHLGIDPVRLMALGDAENDVDMLHLAGVGVCVGNASPPARTAARFVAPTNEEDGAAVALERIM 1143
            P   +TR GMY+ILGE+I++HL+AK+ PGVFIQGLVVYSG+G+EVLYERLLD  IV +VASFCEE GVSLIAYSGD IVCS KD  TD+IA Y EPMP AVGPL DAMA GLR+HKLILMD+KE IDRVRP ++R++GD  T TQALP MLEVLP GASKG+GV +LLKHLGIDPVRLMALGDAENDV+ML LAGVGVCVGNASPPAR AARF+APTN  DG+AVA+E+++
Sbjct:   16 PRARQTRTGMYKILGEDIAAHLKAKDTPGVFIQGLVVYSGAGDEVLYERLLDIEIVSQVASFCEERGVSLIAYSGDEIVCSEKDAETDKIALYSEPMPSAVGPLTDAMAAGLRVHKLILMDSKEAIDRVRPDIERLIGDRATFTQALPDMLEVLPAGASKGHGVNVLLKHLGIDPVRLMALGDAENDVEMLRLAGVGVCVGNASPPARAAARFMAPTNANDGSAVAMEQLL 246          
BLAST of mRNA_F-serratus_M_contig95.20855.1 vs. uniprot
Match: A0A836C834_9STRA (HAD-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C834_9STRA)

HSP 1 Score: 272 bits (695), Expect = 6.310e-83
Identity = 147/274 (53.65%), Postives = 191/274 (69.71%), Query Frame = 1
Query:  328 LASVEAVASDVDGTLTKQHSTVSKRTVAAVKAVLDSEVLFFPATGKTRAGMYEILGEEISSHLRAKNAPGVFIQGLVVYS-GSGNEVLYERLLDASIVGEVASFCEEEGVSLIAYSGDSIVCST-KDEHTDEIAKYKEPMPEAVGPLVDAMARGLRIHKLILMDTKETIDRVRPKMKRVVGDHGTLTQALPGMLEVLPPGASKGNGVEILLKHLGIDPVRLMALGDAENDVDMLHLAGVGVCVGNASPPARTAARFVAPTNEEDGAAVALERIM 1143
            L  ++AVASD+DGT T     V +R + A+ A LDS ++FFPATGK+RAGM   LG      L+A+ APGV+IQGLVVY  G  ++V+YERLL A I  EVA FC +  +SLIAYSGD IVC+  +D++   IA Y EP PEAVG + +AMA GL +HKLI+M   E + + RP + +++G   +L QA+P MLEVLP GASKG GV  LL H+G     LMA+GDAEND++ML +A V V +GNA P  +  ARFVAPTN ++GAAVALE ++
Sbjct:   64 LPEIKAVASDIDGTCTAPDLQVPQRVMDAIVATLDSGIVFFPATGKSRAGMMNTLGPA-GDILKARGAPGVYIQGLVVYGPGPDSKVIYERLLGADIGREVAQFCRDRNMSLIAYSGDRIVCTRLEDKYVTTIADYHEPFPEAVGEIDEAMAAGLPVHKLIIMAPAEEVVQQRPALAQLLGQRASLVQAMPHMLEVLPLGASKGIGVAKLLAHMGFKVENLMAMGDAENDIEMLKMAAVSVAMGNADPEVKKVARFVAPTNAQEGAAVALETLL 336          
BLAST of mRNA_F-serratus_M_contig95.20855.1 vs. uniprot
Match: A0A7S3XQN8_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XQN8_HETAK)

HSP 1 Score: 241 bits (614), Expect = 3.820e-71
Identity = 133/269 (49.44%), Postives = 178/269 (66.17%), Query Frame = 1
Query:  337 VEAVASDVDGTLTKQHSTVSKRTVAAVKAVLDSEVLFFPATGKTRAGMYEILGEEISSHLRAKNAPGVFIQGLVVYSGSGNEVLYERLLDASIVGEVASFCEEEGVSLIAYSGDSIVCSTKDEHTDEIAKYKEPMPEAVGPLVDAM-ARGLRIHKLILMDTKET-IDRVRPKMKRVVGDHGTLTQALPGMLEVLPPGASKGNGVEILLKHLGIDPVRLMALGDAENDVDMLHLAGVGVCVGNASPP--ARTAARFVAPTNEEDGAAVAL 1131
            + A+ASD+DGTL      VS+R V  ++      +LFFPATGK+R G+Y  LGE     L+ +N PGVF+QGL+VY  +GN V++E LL    V +V  FC  EG+SL+AY  D I+CS +D +TD++  Y EP PEA+GPL +AM A G   +KLI+M   E  I ++RP M+ ++G+   +TQA+  MLE+LP G SKG+GV  LL  LG+DP  L+ALGDAENDV+ML LAG GV +GNA P   A T  R  A T++ DG A A+
Sbjct:   37 ITAIASDIDGTLLNSKQQVSQRNVETIQRARKKGILFFPATGKSRQGVYNALGE-FGQELKKENCPGVFLQGLIVYDQNGN-VIHEMLLPLEPVKKVVQFCTREGISLVAYHRDRILCSQRDANTDKLINYCEPTPEAIGPLDEAMVANGQVYNKLIIMGNDEDQITKIRPAMEALIGEDAEITQAIGYMLEILPKGGSKGDGVRRLLGALGVDPAGLLALGDAENDVEMLRLAGTGVAMGNARPALFAATGGRRTA-THDRDGVARAV 302          
BLAST of mRNA_F-serratus_M_contig95.20855.1 vs. uniprot
Match: A0A7S0RP72_9CHLO (Hypothetical protein n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0RP72_9CHLO)

HSP 1 Score: 213 bits (542), Expect = 1.040e-60
Identity = 119/271 (43.91%), Postives = 165/271 (60.89%), Query Frame = 1
Query:  346 VASDVDGTLTKQHSTVSKRTVAAVKAVLDSEVLFFPATGKTRAGMYEILGEEISSHLRAKNAPGVFIQGLVVYSGSGNEVLYERLLDASIVGEVASFCEEEGVSLIAYSGDSIVCSTKDEHTDEIAKYKEPMPEAVGPLVDAMARGLRIHKLILMDTKETIDRVRPKMKRVVGDHGTLTQALPGMLEVLPPGASKGNGVEILLKHLGIDPVRLMALGDAENDVDMLHLAGVGVCVGNASPPARTAARFVAPTNEEDGAAVALERIMLEGRN 1158
            + +DVDGTL      ++ RT  AVKA  D+ V    ATGKTR    + +   +   +     PG+F+QGL++Y  +G E++Y   L   I  E   F ++ GVSLIA+  D I+C ++DEHTD    + EP  EA+GPL D +   + +HKLILM  + T++R+RP+ + +      LT A+PGMLE+LP GASKG  VE LL H+ IDP  +MA GD ENDV+ML L G  V V NA   AR+A+  V  +N+EDG A A+E+ +L  RN
Sbjct:   49 IVTDVDGTLLNSSQQLTLRTEQAVKAAQDAGVPTIVATGKTRGPWSKDVLPRLGPPM-----PGIFVQGLLIYDEAG-EIIYSNPLPDHIALEGIQFAKKHGVSLIAFCQDRILCESEDEHTDRTLDFGEPRAEAMGPLEDVLGE-VEMHKLILMGEESTLERIRPEAEALFEGRAALTVAVPGMLEILPKGASKGQAVEWLLNHMKIDPSNVMAFGDGENDVEMLRLVGASVSVENAGTHARSASITVTASNDEDGVAQAIEKFVLAPRN 312          
BLAST of mRNA_F-serratus_M_contig95.20855.1 vs. uniprot
Match: A0A8J4BBV4_9CHLO (Uncharacterized protein n=1 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4BBV4_9CHLO)

HSP 1 Score: 213 bits (543), Expect = 1.330e-60
Identity = 125/276 (45.29%), Postives = 169/276 (61.23%), Query Frame = 1
Query:  331 ASVEAVASDVDGTLTKQHSTVSKRTVAAVKAVLDSEVLFFPATGKTRAGMYEILGEEISSHLRAKNAPGVFIQGLVVYSGSGNEVLYERLLDASIVGEVASFCEEEGVSLIAYSGDSIVCSTKDEHTDEIAKYKEPMPEAVGPLVDAMARGLRIHKLILMDTKETIDRVRPKMKRVVGDHGTLTQALPGMLEVLPPGASKGNGVEILLKHLGIDPVRLMALGDAENDVDMLHLAGVGVCVGNASPPARTAARFVAP-TNEEDGAAVALERIMLEGR 1155
            A ++ +ASDVDGTL      ++    AAVK      V    ATGK R         E+   L     PGVF+QGL+VY   G+  LYE+ L A +  +  S  +  G++L AY G+ I+C+  D HTD +  YKEP PEAVG L   +   ++I KLI M  +  ID +RP++++++    +LT AL GMLEVLP GASKG G+  LL+HLG+DP  +MALGD ENDV+ML +AG+GV +GNA P A++AA  V   TN+EDG A A+ R +LE R
Sbjct:   59 AEIKLIASDVDGTLLNHQQQLTPAVEAAVKQASALGVPLVVATGKARGPW----AHEVLPRL-GLTTPGVFLQGLLVYDADGSR-LYEQQLPADVAQDCISLAKARGITLTAYCGERILCAATDSHTDRLNFYKEPPPEAVGDLARIVGE-IQIQKLIFMADQFVIDSLRPEVEQLLTGRASLTTALSGMLEVLPLGASKGAGLSWLLEHLGVDPAHVMALGDGENDVEMLQMAGLGVAMGNAGPKAKSAADVVLEETNDEDGVAKAIIRYVLEPR 327          
BLAST of mRNA_F-serratus_M_contig95.20855.1 vs. uniprot
Match: A0A0G4H592_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4H592_9ALVE)

HSP 1 Score: 209 bits (531), Expect = 1.390e-58
Identity = 122/274 (44.53%), Postives = 168/274 (61.31%), Query Frame = 1
Query:  334 SVEAVASDVDGTLTKQHSTVSKRTVAAVKAVLDSEVLFFPATGKTRAGMYEILGEEISSHLRAKNA-PGVFIQGLVVYSGSGNEVLYERLLDASIVGEVASFCEEEGVSLIAYSGDSIVCSTKDEHTDEIAK----YKEPMPEAVGPLVDAMARGLRIHKLILMDTKETIDRVRPKMKRVVGD-HGTLTQALPGMLEVLPPGASKGNGVEILLKHLGIDPVRLMALGDAENDVDMLHLAGVGVCVGNASPPARTAARFVAPTNEEDGAAVALER 1137
            S+ A+A D+DGTL   H TVS + VAAV+    +    F A+G+TR G    LG      L+A+   PGV+  GL+VY G  ++VL+ER LD S V  VA FC   G+  + YS + I+C   DE T  +A+    YKE +P AVG +V+A   G  I+K+++ D  ETI  VRP ++ +     G + QA+P M+EVLP GASK  G+  LLK++ IDP  LMA+GD END++M+ LAGVGV V NA P  +  A+F   +N+EDG A A+ R
Sbjct:   49 SIRAIALDMDGTLMSSHQTVSAKNVAAVEWARRNGKFIFIASGRTRTGAMNALGA-YGELLKAQGGFPGVYCNGLLVY-GQRSQVLFERALDTSAVAAVAEFCRARGLPFVGYSREEILC---DELTAHLARMHNEYKEALPLAVGDVVEAAKEGRVINKMLIFDDPETIAAVRPALESLAPSLGGRVVQAVPDMIEVLPEGASKAEGIAALLKNVNIDPEDLMAVGDGENDIEMIQLAGVGVAVANAQPKLKAFAKFEVASNDEDGVAEAICR 317          
BLAST of mRNA_F-serratus_M_contig95.20855.1 vs. uniprot
Match: A0A7S0S5C6_9CHLO (Hypothetical protein n=1 Tax=Chlamydomonas leiostraca TaxID=1034604 RepID=A0A7S0S5C6_9CHLO)

HSP 1 Score: 207 bits (528), Expect = 1.990e-58
Identity = 118/273 (43.22%), Postives = 164/273 (60.07%), Query Frame = 1
Query:  337 VEAVASDVDGTLTKQHSTVSKRTVAAVKAVLDSEVLFFPATGKTRAGMYEILGEEISSHLRAKNAPGVFIQGLVVYSGSGNEVLYERLLDASIVGEVASFCEEEGVSLIAYSGDSIVCSTKDEHTDEIAKYKEPMPEAVGPLVDAMARGLRIHKLILMDTKETIDRVRPKMKRVVGDHGTLTQALPGMLEVLPPGASKGNGVEILLKHLGIDPVRLMALGDAENDVDMLHLAGVGVCVGNASPPARTAARFVAPTNEEDGAAVALERIMLEGR 1155
            +  + +DVDGTL      ++ R  AAVKA   + V    ATGK R      +   I   +     PGVF+QGL+V  G G   L++R ++ ++V +     +  GV+L AY GD I+ ++ DEHT+ +  YKEP  EAVG L   + + + +HKLI M  +  ID +RP ++  +    +LT AL GMLEVLP GASKG+GV  LL HL  D   +MALGD ENDV+ML L+G+ V +GNA P A+ AA +VAP N+EDG A A+E+ +L  R
Sbjct:   45 IRLIVTDVDGTLLNSKQELTPRVEAAVKAAAAAGVPLVVATGKARGPWVREVFPRIDMDM-----PGVFLQGLLVCDGQGG-TLWQRPMEDAVVAQCLQLADSYGVTLTAYCGDRILAASLDEHTERLKFYKEPTVEAVGHLSGILGQ-VPVHKLIFMAPQTKIDEMRPAVEAALAGSASLTTALTGMLEVLPLGASKGSGVAWLLSHLDADASHIMALGDGENDVEMLQLSGLAVAMGNAGPVAKAAAHWVAPRNDEDGVAAAIEKFVLAPR 310          
BLAST of mRNA_F-serratus_M_contig95.20855.1 vs. uniprot
Match: A0A0U9HKK9_KLENI (Haloacid dehalogenase-like hydrolase (HAD) family protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A0U9HKK9_KLENI)

HSP 1 Score: 207 bits (526), Expect = 2.020e-58
Identity = 108/273 (39.56%), Postives = 169/273 (61.90%), Query Frame = 1
Query:  334 SVEAVASDVDGTLTKQHSTVSKRTVAAVKAVLDSEVLFFPATGKTRAGMYEILGEEISSHLRAKNAPGVFIQGLVVYSGSGNEVLYERLLDASIVGEVASFCEEEGVSLIAYSGDSIVCSTKDEHTDEIAKYKEPMPEAVGPLVDAMARGLRIHKLILMDTKETIDRVRPKMKRVVGDHGTLTQALPGMLEVLPPGASKGNGVEILLKHLGIDPVRLMALGDAENDVDMLHLAGVGVCVGNASPPARTAARFVAPTNEEDGAAVALERIMLEG 1152
            S+  +A+DVDGTL      +   TVAA+KA +   +    ATGK R    + +  ++         PGV++QGL++Y G G+ +LYER +D  +  +V     EE V++ AY G+ I+C+ +D+HTD +  Y EP+PEA+G L+D + + + I+KL+ M  +  ID +RP ++  +G   TL  AL GMLEVLP GASKG G++++L+ + +D   ++A+GD END++ML   G  V +GNA    + AA+FV  +N+E G A+A+E  +L G
Sbjct:   22 SITVIATDVDGTLLDSKQQLRGETVAALKAAMAKGIQVLIATGKARGPWIDTVLPQLGL-----TTPGVYMQGLILYDGDGS-ILYERCMDEDVARKVIRLGVEENVTVTAYCGNRILCAERDKHTDRLIGYGEPVPEAMGSLLDVVGK-IPINKLLYMGEQSAIDAIRPAVQAALGREATLVTALNGMLEVLPRGASKGLGLKMVLERMAVDARHVLAIGDGENDIEMLRTVGTSVAMGNAGAEVKAAAQFVTSSNDESGLALAVESFVLGG 287          
BLAST of mRNA_F-serratus_M_contig95.20855.1 vs. uniprot
Match: A0A8J4CUD4_9CHLO (Uncharacterized protein n=1 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4CUD4_9CHLO)

HSP 1 Score: 208 bits (529), Expect = 2.170e-58
Identity = 122/276 (44.20%), Postives = 168/276 (60.87%), Query Frame = 1
Query:  331 ASVEAVASDVDGTLTKQHSTVSKRTVAAVKAVLDSEVLFFPATGKTRAGMYEILGEEISSHLRAKNAPGVFIQGLVVYSGSGNEVLYERLLDASIVGEVASFCEEEGVSLIAYSGDSIVCSTKDEHTDEIAKYKEPMPEAVGPLVDAMARGLRIHKLILMDTKETIDRVRPKMKRVVGDHGTLTQALPGMLEVLPPGASKGNGVEILLKHLGIDPVRLMALGDAENDVDMLHLAGVGVCVGNASPPARTAARFVAP-TNEEDGAAVALERIMLEGR 1155
            A V+ +ASDVDGTL      ++    AAVK      V    ATGK R         E+   L     PGVF+QGL+VY   G   LYE+ L   +  +  +  + +G++L AY G+ I+C+  D HTD ++ YKEP PEAVG L   +   + I KLI M  ++ I+ +RP+++ ++    +LT AL GMLEVLP GASKG G+  LL+H+G+DP  +MALGD ENDV+ML LAG+GV +GNA+  A++AA  V   TN+EDG A A+ R +LE R
Sbjct:   73 ADVKLIASDVDGTLLNHQQQLTPAVEAAVKQAAALGVPLVVATGKARGPW----AREVLPRL-GLTTPGVFLQGLLVYDADGTR-LYEQQLPEDVARDCIALAKAQGITLTAYCGERILCAATDGHTDRLSFYKEPPPEAVGDLAQIVGE-VPIQKLIFMAEQDVIETLRPRVELLLTGRASLTTALSGMLEVLPLGASKGAGLSWLLEHMGVDPAHVMALGDGENDVEMLQLAGLGVAMGNAAAKAKSAADVVLEETNDEDGVAKAIIRYVLEPR 341          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig95.20855.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LI88_ECTSI6.730e-14564.04Haloacid dehalogenase-like hydrolase n=1 Tax=Ectoc... [more]
A0A6H5KW38_9PHAE7.130e-11875.76Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836C834_9STRA6.310e-8353.65HAD-like domain-containing protein n=1 Tax=Tribone... [more]
A0A7S3XQN8_HETAK3.820e-7149.44Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S0RP72_9CHLO1.040e-6043.91Hypothetical protein n=1 Tax=Pyramimonas obovata T... [more]
A0A8J4BBV4_9CHLO1.330e-6045.29Uncharacterized protein n=1 Tax=Volvox africanus T... [more]
A0A0G4H592_9ALVE1.390e-5844.53Uncharacterized protein n=1 Tax=Chromera velia CCM... [more]
A0A7S0S5C6_9CHLO1.990e-5843.22Hypothetical protein n=1 Tax=Chlamydomonas leiostr... [more]
A0A0U9HKK9_KLENI2.020e-5839.56Haloacid dehalogenase-like hydrolase (HAD) family ... [more]
A0A8J4CUD4_9CHLO2.170e-5844.20Uncharacterized protein n=1 Tax=Volvox reticulifer... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig95contigF-serratus_M_contig95:702471..712627 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score438.0
Seed ortholog evalue4.5e-120
Seed eggNOG ortholog2880.D8LI88
Hectar predicted targeting categorysignal peptide
GOsGO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004540,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009507,GO:0009536,GO:0009657,GO:0009658,GO:0009987,GO:0010467,GO:0016043,GO:0016070,GO:0016072,GO:0016787,GO:0016788,GO:0022613,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901259,GO:1901360
EggNOG free text desc.Sucrose-6F-phosphate phosphohydrolase
EggNOG OGs2S1YA@2759,COG0561@1
Ec32 ortholog descriptionHAD-like domain
Ec32 orthologEc-14_003610.1
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons5
Model size1750
Cds size1113
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932715.2855847-UTR-F-serratus_M_contig95:702470..7025301622932715.2855847-UTR-F-serratus_M_contig95:702470..702530Fucus serratus maleUTRF-serratus_M_contig95 702471..702530 +
1690964437.3537612-UTR-F-serratus_M_contig95:702470..7025301690964437.3537612-UTR-F-serratus_M_contig95:702470..702530Fucus serratus maleUTRF-serratus_M_contig95 702471..702530 +
1622932715.51798-UTR-F-serratus_M_contig95:712050..7126271622932715.51798-UTR-F-serratus_M_contig95:712050..712627Fucus serratus maleUTRF-serratus_M_contig95 712051..712627 +
1690964437.4374824-UTR-F-serratus_M_contig95:712050..7126271690964437.4374824-UTR-F-serratus_M_contig95:712050..712627Fucus serratus maleUTRF-serratus_M_contig95 712051..712627 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932715.418895-CDS-F-serratus_M_contig95:702530..7029351622932715.418895-CDS-F-serratus_M_contig95:702530..702935Fucus serratus maleCDSF-serratus_M_contig95 702531..702935 +
1690964437.3708708-CDS-F-serratus_M_contig95:702530..7029351690964437.3708708-CDS-F-serratus_M_contig95:702530..702935Fucus serratus maleCDSF-serratus_M_contig95 702531..702935 +
1622932715.4359918-CDS-F-serratus_M_contig95:710016..7102351622932715.4359918-CDS-F-serratus_M_contig95:710016..710235Fucus serratus maleCDSF-serratus_M_contig95 710017..710235 +
1690964437.3854387-CDS-F-serratus_M_contig95:710016..7102351690964437.3854387-CDS-F-serratus_M_contig95:710016..710235Fucus serratus maleCDSF-serratus_M_contig95 710017..710235 +
1622932715.4567614-CDS-F-serratus_M_contig95:710461..7106621622932715.4567614-CDS-F-serratus_M_contig95:710461..710662Fucus serratus maleCDSF-serratus_M_contig95 710462..710662 +
1690964437.396263-CDS-F-serratus_M_contig95:710461..7106621690964437.396263-CDS-F-serratus_M_contig95:710461..710662Fucus serratus maleCDSF-serratus_M_contig95 710462..710662 +
1622932715.4744453-CDS-F-serratus_M_contig95:710940..7110491622932715.4744453-CDS-F-serratus_M_contig95:710940..711049Fucus serratus maleCDSF-serratus_M_contig95 710941..711049 +
1690964437.407388-CDS-F-serratus_M_contig95:710940..7110491690964437.407388-CDS-F-serratus_M_contig95:710940..711049Fucus serratus maleCDSF-serratus_M_contig95 710941..711049 +
1622932715.4960575-CDS-F-serratus_M_contig95:711871..7120501622932715.4960575-CDS-F-serratus_M_contig95:711871..712050Fucus serratus maleCDSF-serratus_M_contig95 711872..712050 +
1690964437.4178433-CDS-F-serratus_M_contig95:711871..7120501690964437.4178433-CDS-F-serratus_M_contig95:711871..712050Fucus serratus maleCDSF-serratus_M_contig95 711872..712050 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig95.20855.1prot_F-serratus_M_contig95.20855.1Fucus serratus malepolypeptideF-serratus_M_contig95 702531..712050 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig95.20855.1

>prot_F-serratus_M_contig95.20855.1 ID=prot_F-serratus_M_contig95.20855.1|Name=mRNA_F-serratus_M_contig95.20855.1|organism=Fucus serratus male|type=polypeptide|length=371bp
MVRFNTRLCLGLLPATVVAASSALGRAGHRSTYYHCYRRRPSVAFGWSSR
LSSDDSAGERPTSPKPLQSAVKSGSVSRPQEFSAAPSSLLASVEAVASDV
DGTLTKQHSTVSKRTVAAVKAVLDSEVLFFPATGKTRAGMYEILGEEISS
HLRAKNAPGVFIQGLVVYSGSGNEVLYERLLDASIVGEVASFCEEEGVSL
IAYSGDSIVCSTKDEHTDEIAKYKEPMPEAVGPLVDAMARGLRIHKLILM
DTKETIDRVRPKMKRVVGDHGTLTQALPGMLEVLPPGASKGNGVEILLKH
LGIDPVRLMALGDAENDVDMLHLAGVGVCVGNASPPARTAARFVAPTNEE
DGAAVALERIMLEGRNKPTQ*
back to top

mRNA from alignment at F-serratus_M_contig95:702471..712627+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig95.20855.1 ID=mRNA_F-serratus_M_contig95.20855.1|Name=mRNA_F-serratus_M_contig95.20855.1|organism=Fucus serratus male|type=mRNA|length=10157bp|location=Sequence derived from alignment at F-serratus_M_contig95:702471..712627+ (Fucus serratus male)
AACAATCTACATAGGATCCAGTTGTCCCTTGCTCCAGGGCCCAGCATAGA GGCGGAAGCTATGGTACGATTCAATACGCGGCTGTGTCTTGGGCTCCTCC CAGCCACCGTGGTGGCGGCCTCGTCAGCACTAGGTCGCGCGGGCCATCGG TCGACGTACTACCACTGCTACCGTCGTCGCCCGTCAGTTGCCTTCGGTTG GTCATCTCGCCTCTCGTCTGATGACTCAGCAGGAGAGCGGCCTACAAGTC CAAAGCCATTGCAGAGCGCTGTCAAAAGCGGCTCGGTGTCTAGGCCGCAG GAGTTTTCCGCTGCTCCATCATCCTTACTCGCGTCAGTGGAGGCTGTTGC GAGCGACGTGGACGGTACTTTAACGAAGCAGCACTCGACAGTCTCGAAGC GAACGGTTGCGGCGGTGAAAGCGGTGCTGGACTCGGAGGTATTGTTCTTC CCGGCCACTGGGAAGGTGAGGAACAGGAACAGAATTGTGTTCTGGAGCGG AGGAATGACGTGTTTTTGTTTTTGTGGTGAGTGTGGGGAGAATTCCGGGC TGAGCTCCCACCTGTAGTCATTTTCACAGGTCCAGTACACCTTTTCCTAA CAACGGTTGTATGTAAGTATAGTCTTATATACCAGTATATAGTTATCAAC CCGGTAAGGTTGCCAATCGTGCTCGTGGTCAGCTGAACAGGGAAAATGAC GTCGTTCCTGCTCTCAGACACATCGCCGGTACTTTCAACATGCCCACTTC ATACCACTATTTGTAGTGGGTGTGGGAATGAGAGGCGTATATTAATTGGT CCATAGTGGCCTGCTAAGGCAGCACTCGTTCGGAACTACCTTGAGGTTTA CTGGCCCTGTGCCGGCGGACTCTCGGCAGTGAACGCCATCGGTACGCAAT TGCGTGACCCGATAAACTTGAGACTGACCCGATGGCGTATGGCGGTTTAA AATAAATAGATGGACGCCGCCGCGGAACTCTGGAGGAATCCCGTAAGTAA GCACCAGATTCAGTCTGAGTATGGAGATGAGCAGGCTCACGCGGGACGGG ACTGCCGAAACCGTCTCGCGCGACCAAATTCTCAGGCGCGAACGCGGACA GGGAAATGTAAATTTTCCCTGTTCAGCTGACCACGAGCAGGATTTGGCAA CCTTACCCGGTTGATCCATACTCTTGCTATATGTGTGACCATACATACAA TGAGTACAACACGTACTCCGGCGTTGTTTCGATTTTACACTATAATATTA TTATTATAACAGCATAAATACCGCACCTCTAAAATGTTGTTTTTGGTGTT GATTCCCTTGAAATGATAAATACAGCACTTTTATGTGCCTGGTTCAGAGA GACACCTCCTGTACAGCACTATAATAGTCCCCCGGTACCTCTCGCCCGCA GTCTGCTATCATATTAATTATTAATGGTGCTTGGACGGCGAATTAGCGGT GCTTGTTAATGAACCCTCTTGAGAAATACAGCACTTTTTTACGTCCAGAG GGTACAACCAGTAATAGTAATTCAGAGTACTGTACCCATGATAGATTCGC CGCAAGAGCCAAACCAGGATATCGCCGTTACTTTCAATATGCCCGCTTTA TACCAATATTAGTATAGTGGGTGTGGAAAAGAGAGGCGTATAGGAATTGG TCCATGGTGACCTGCTAAGGCAGCACTCGTTCGGAACTACCTTGAGGTTT ACTGGCCCTGTGCCGACGGACTCTCGGCAGTGAACGTCATCGGTACGCAA TTGCGTGACCCGATAAACTCGGGACTTACCCGATGGCGTATGGCGGTTTA ATATAAATATATGGACGCCGCCGCGGAACTCGGGAGGAATCCCGTAAGTA AGCACCAGATCCAGCCTGAGTATGGAGATGAGCAGGCTGACGCGGGACGG GACTGCCGAAACCGTCTCGCGCGACCAAATTCTCAGGCACGAACGCGGAC AGGGGAATATTATTTTCCCTGTTCAGCTCACCACGAGCAGGATTGGCAAC CTTACCAGGTTGATCCATACTCTTGCTATATGTGTGACAATACATGACAG CTCCCTCGGTGTGCTGTAACTCTAATACTCTCGCCCGCCGGGTAGTCTAG TCCAACAGCTCTATTTATAATTAATACCAGGTACAGTACTAGGCTATAGT AGTTGTAAATAGGCAACGAGGCACTGTAAGATCTTTTGTGCGAAATGGAT GACTTCGAATCTCGACAGGGTCATGTGTTTTATATTTTTCAGGATCCTGA TCTATTGTACTTATCTACTTCTGTAGTATGTACCGGTATGTATTATGGCC ATCACTTGCAGCAGTAGAGTACAGTATGGATCAACAACAACAACAACAAC AAAAAACGGTAAGGTCACAAATCCTGCTGGTGGTCAGCTGAACAGGAAAC ATATTTTTTTCCCCGTTCGCGCCTGATAATTTTGTCTCGCCAGACAGGTT CGGCCATCCCGTCCCGCGTGAGCCTTCTCATTCTCTACACTCAGGCTGAA TATGGTGCTTACTCACAGGACTCCTCCCGTTTTCCTTGACGGCGTCCATT TATTTATACCATTAACCACCAGGGGGTCAGTCCCGAGTTTCAGGTCACGC AGTTGTGTACCGATGTCGTTCACTGCCGGGAGGCCGCCGACGTGGGGTTG CCGATAGCGGGTGCTGCCTTTTCAGTTATCACTATGTCATTGACCAATTA ATATTCGCCTATCTTTTCCCACATCCACTATTGGTACAGTGGACATGTAC GATAATATGTACATAAAAGGATCGGAGGTGGAAAATGTGAGAGCGTGAGT AGGTAAAATCCAACCATAATGCATTGGTTCACGAGGTTTAAGAGAGCTGA ACTATTAACATTAATAGCATCGCAATTAGAAATCGTAGACGGGAGCCGGG GAGGGACTGATGGAGCCCTTAGAAACCGCATGCGGGGTGGACAACTTAAC AGTTTGATTGGTTGATTGATTCGCATTTCCAGGGCATTATCCTTGCAGAA AAACGACTGCGGAGACAAAAAAATCAGCCCTAGAGCGATGGTGTGGCAAT CCCGACTGTAGTGTCGTGAAGGTTCAAAAAGATCAACGTGTCACGTCATG GTGTGTATATATGGTCATCACATAGCTAAGTATGGATAAACCGGGAAAAG TTGTCAATCCTGCTATTAATATTGTTAGTGGTCAGCTGAACAGGGAAAGT GAAAATTTCCCTGTCCCCGTTCGCGCCTGAGAACTTGGTCTCTCCAGACG GGTTAAACTGACTCGTTCCGCGCCAGCCTGCTCATTCTCCATGCTCAGGC TGAATCTGGTGCTTACTCGCTGGATCCCTCCCGCTTTCCTCTACGACGTC CACTTATATACCGTCGACCGCCATCGGGTCAGTCCCGAGTTTATCGGGTC ACGCAATTGCGTACCGATGGTGTTCACTGCCGAGAGTCCACCGGGACAGG GCTAGTAGTCCTCACGATAGTTCCAATAACGGGTGCTGCCTTTGCAGGTC ACCATGGACTAATCAATCAATGTATTCCTCTCGTTTTCCACACTCACTAT TGGTATGAAGTGGATATGTTGAAAGTATCGGTGTCACCCCGCTACTCACG CCAACAGCACTTCGGAACTGCTACAAAATCCTAGTCAAGTCCTACAGTGT ACCAACCAAGCATCCTATCCGCGTCACAACGAAAGAGTCACGCTCCGATC AGTTTGATCGACAAAACCCGCGTTTCTCAGAGGCCATGTAATGCATAAAA AGGGGAGAAAAATGTTGTAACGAGGCCCATGGTCATAGAGACCTTCAGTA GCTGTGAAGCCCGCACCCCAGGCAGCATGCACCCATACAAAATTTTGAAC ATCCTTGGAAATCGACCTAGGAATCTTTCCCGTTCGTCGCTAGATGTTGG CTCTCGTAGAAATAAATCAGGTCGTAAACAGAAATCAGCTTTCCGCCCTG AAATCTTCCGATTGTTGCCTGTGATTCTCGCGCACAAAGGTTCAGCATTC CTTTGGCTTGTCGACGATCGAGCTACCCTCTACCCTGGCCGAATCTGATG CTTCCTCAACTGATAGTACATGCAGCAATACGCTTGCGCATGCTGCGGCA CCTCAACAGGGGTTCGGTGACAGTGCCAACTGCCTCTCGCGTGCCACCAC CTCCCGAAGGGCACCAAATCGTTTTTCAGGAGAGGCACACCTGATTAACA CCGTCTTGACCCAACCAAATCGCCACTGCTTGTCAACCAGCTGGCTGAAT CGGGTAGGCGGCCAGCTGGTGTCACTTCTCGAGGTTGAGCCCAGCTGATG CCACTTCTCTACACCCACCAGAAAGAGTCCCCCAAGCCACTCATAGCCCA AAACCAGGGTTAGGGCGGAAAGGGTACCGTAAGTATCGAACTCTTGGCAC ACCCGCTAGACCGACTTTCCAGGCTCGATTGCTCCACAACCAAGAGGATG TGAACACTGACCGATCCGTCTCAGGAAAGCTTTCGACGAGATACCGCCCT TTTCGGCATTGATACCCTCTTGGTTGTGGAGCAATCGAGCCTGGAAAGTC AGTCTAGGGGGTGTGCCAAGACTCCGATACTTACGGTAAGTGTATGTTAC GTGGATTGGTAACCTTGAAAGTTGGTTGGCCTCAGTAACAGAAAAACAAC CAGAGAAAAATTGTATACCAGCATACAGTATACATATATATATACATTTC GAACCAGGCGGTGATTGCGCCGCTTGGGGCACTGTCATGCGGGGAGATTA GACCTAGGGCGTGGTATCAAGAGCAATATTACTAGTAATATTAATATTGA TAGTAGTATAGGAAGCGGTCCGTCCGCTTTCCTTGTCTCACTCCGAAGTC GCACAGCAAAATACAGCAAAGCCAATACAGCAAAATACAGAAACGCACGG AGCTTGGCGTAGTGGTCCCGGCGGAAGGGTTCAAGTCGCGCACCCGTACA GGAGGGCCTCGATCACTTCGGCTTTCACCATCCGCATATTTCGCATCTCA AGGGCGAGAGGTACGTTTAGTCGGTGACAAGTCATATACCTGGTATCATC AATATTGCTCCTCTTTGTACTTTTCTCGCGTAGCCATGCGGCGCGTCTCC TTCGGGTGATCTCGGCGATCGCAGGTGGAGGTTCAATGACCCTTTCCCCA AGATCCACGAACGAGTCGATCTTGCTTGTAGGACTGCCTCGAAGCATCAA GCTGAATCTTGTCCGCGGGGGCGAACAAGCGGCCAACCAGAATACTGGGG ACTCGGTGACAGCTGACGATCCGGACTTTGATCTGGGCGTATGGGGGTTC GATGCGTTCGCGTAAGGCCAAACAGGGCCGCCGTGACTACCAAGGCGAAA CCCCGCTCTCAAATCCTGAAGACAGAGTGGTGACCGAAGTATACCGCATG ACCCGTTGTCTGTCTTCGGCATGCTCTTGTGGGCCACATCGCCTGCAGCT GTGCTTGCGTAAGTTATTGTGAGCTTTCCTTCCTATCAGTCGCGAGTCCT CTGCTCGTTTTTGCCATTGTAGGGCCACGACAAAAGGGGCTCTTGGAAAC CTCGTACCCAATCAGCGCGCGATCAGGCGAAAAGTCCCTTAATTTTTTTT CCCAATTTACAGAGGGTGTACCTAAGGACACAGGCGGTGGGTTTGGGGTT CGTACGAAGCTGCACCGCGGTGAAGAGAACAAGCAACGAGCTGTTCGTCT ATTGTTGGAGGAACATTTCGAGCAAGAACCCGCTAAGGTTCCCTCTGGCT ACCATCAGCCAATCAAATTTCGCACATCAAGAAAACGATTCAAAACCAAA ATAACCAAACAAAACGGTTTCGTTTCGTCGACATTTATACTTCAAATTGC ACATAGCCGCGCAATCCGGTCCCATAGTGCCAATCGGTTTAAGCTTCTCG TATTTACTCTTTCCAATTGTGTGTGTGTGTGTGTGTGTGTGAGAGAGAGT ATGTGTGTGGTCATCTCATTGAGGCGATTGGGCACCATACGCGTAAGGCT GCCTATCCTTCTATTAGGCTCTATAGTGTTTGGATGAAGAGGCGGAAAAA ATAATGAAGTTTCCCTGTCCTTCGCGATACAGGTTACGATGTCCTGCCCC GTATTAGCCCGCTCATTCGTCACACCCAGGCTGAATCATCTCGTGGTGCT TACTCTTACTCACGGGCTCCTCTCCTTCCTCCCCCTTTACGCGATAACAT CCATGATGATAACATCCATGATGTATGTATGGTCATCACATATAGCAGAG TATGGATCAACCGTGTAAGGTTGTCAATCCTGCTCGTGGTCAGCTGAACA GGGAAAATGAATGTTCCCCTGTCCCCGTGCGTGCCTGAGAATTTGGTCTC GCGAGACGGGTTCAGCCGTCCCGCGCCAGCCTGCTCATCTCCATACTCAG GCTGAATCTGGTGATTACTTACGGGATTCCTCCTGAGTTCCGCAGCGGCG TCCATTTATGAAACCGCCATACGCCATCGGGTTAGTCCCGAGTTTATCGG GTCACGCTCTTGCGTACCGATGGCGTTCACTGCCGAGAGTCTGCCGGCAC AGGGCCAGTAAACCTCAAGGTAGTTCCGAACGAGTGCTGCCTTGGCAGGT CACCATGGACCAATTAATATTCGCCTCTCCTTCCCACACCCACTATTGGT ATGAAGTGGGCATGTTGAAAGTAACGGCGGTATGATAACGGTGTCCATCT AAATCGCCAACTGCCGTAGGAGCAGCCCCGAGTTAATCAGGCTACGCAAT TGCATGCCGGTGAACGTTCACGGTCGAGAGTTGTTCGGCACAGGGCCAGT AGTCATAGTCCTCAAGGCAGCTCGAGTAGCGGGTGTTACCTATTATTAAT AGTATTCAGGTAACTCTTATGGGTCACGTTACCTAATAATAGTACGATGG GCACGTGCGGTGTCGAGATACGCGGGTGTCCAACTTCGCAGGTTTCAACA GGAAAAAAATATTATTTGAATTAAAAAACAATCCTCCGTACAAAGCAAAG CAAAGGCATTAGCTCGTTAGATAGGGGGGCACGGATGCATAGCCTCGGTG GTCAAACTGGGTCAAACACGACAACTTGTAATGTGTGTAGCGATTACCCT CATCCGATCGATACGACAGTTGCAGCTTCCATCAGACAAACCTTTTTCCA ATTCGTACGCGTTTGAATCCTGTAAGTCAGATTCAGCTTGAGTACGGAGA TGAGCAGGCTGACGCGGGACGGGACGGCTGAACCCGTCGCGCGAGACCAA ATTCTCAGGCACGCACGGAGACAGGGGAATATTCATTTTCCCTGTTCAGC TGACCACGAGCAGGATTGGCAACCTTACACAGTTGATCCATACTGTACTC TGCTATATGTGATGACCATACATACATATATACATACCATGCATAGTTCA TGGGGAAAAGTAGGGAGAACCCATGTACGAAGCTCGTATTCATAACAGAA CTGCATGTCTAAGCCGCAGATGCAATGGTTTTGTGATGGCATAAACATAC AGTTGGAGCTCTGTTGGTTTCCTTGGGCGTAACGGTTGATCGAAAGACGC GCGCAGGTATGTACGAGATTCTGGGAGAAGAAATAAGCTCCCATCTGAGA GCCAAGAACGCTCCAGGCGTCTTCATTCAGGGCCTTGTTGTCTACTCAGG TTCGGGAAACGAGGTGCTGTACGAGCGCCTCTTGGATGCAAGCATTGTGG GTGAGGTGGCGAGTTTCTGCGAGGAGGAAGGTGTCTCCCTCATCGCCTAC AGCGGCGACAGCATCGTGAGTGCACCTTATTTTTTTATCTTTCGTGTGAC ACTAGATGGACTTCGATAGCTTATATTTCGAAGTTCCATGAACGACGATG CCAGGGAAGCCTCGCGTCATGAGACATACCTATAAATAAAAGTCGGCTGT ACTGTACCTGTGAGTTGTCAGTTGATGCCTTGCGTAGTGCCTGTATTCAA GGTGCACAAACGCGTCAATTCCACCACCTGTACATCGGCAGGTATGCTCC ACTAAGGACGAGCACACCGACGAGATAGCAAAATACAAGGAACCCATGCC GGAGGCAGTTGGTCCGCTCGTCGACGCCATGGCGCGTGGCCTGAGGATCC ACAAGCTTATTCTCATGGACACGAAAGAGACGATCGATCGAGTGCGGCCG AAGATGAAGCGAGTGGTCGGCGACCACGGAACTCTCACGCAGGTGTCCAA CATCGTTTCATGCATTTTCATACGGCTGGCTCAGTGTTAGCGACAGTGTA GTTTCGCAACGATTATCTGGTTGGACAGGACAAGATAATCATGATTCTCT TGCAAGGCAGAGGAACGGAATGGGGTCAGTCAGAGCAGTCAGATCTGACC GAGTTTTTTTCCGAAAGCATGGGACCACCGCCCATCATTGGGGCTTATGA ATACCAGGTACTGTAGCTATATACATTACATCGCTCGTGACTTCGATGTT CGCCTCCGCCTCCTCTCCAGGCCTTGCCAGGAATGTTGGAAGTGCTGCCG CCGGGAGCTTCCAAAGGCAACGGGGTGGAAATCCTGCTGAAGCACTTGGG GATTGACCCCGTCCGTTTGATGGCACTAGGTGAGCTCCCCGAGCAATGAA GCATATGCCCAAGACACGCCTGTGATCGCCCGTTGTAGCCAGCAGCCGGC CTAACGATATGATCTGCGGAGTACGTGGTATTCGCCCTTTGGACACAGCC CTCGTTTTTGACACGAGTGTTGAATTTAGTATAAACACGCCCATCACTTT TTTAAGAAACCGGTACCCATATCGATCACCACGATTGATTTTTCACCACA CTTAGGAATAGGTTGTTTTGTTGTTGTACATATAGAGATAGTCACTTTCA AAAGACTGGGCATCAACGGGGCATGGTTTCTAATCCTGCTTGTGGTCAGG TGAAACCCGAGCACTGAGTTAACCAAAACCTCGGTGGCCCCGCTTTATCG GTATTCTTTATTTTTCTGCCGCTTACTCCAGTGATGTGCCCATATCATTG AGATTGATTCAGATTGTTAAATAGTATCTACCTGGTCTCGAAAACCCCGG GGATCTGCTTTGCAGCCGGGGCCTACTGTACACAAACAACAAAAAACAGT TCTCATGCGTCAACTAAAATGGAAAATAAACCTTCAATAAAAAGAAGAAA AACACGTTGTTCTCATCTCGTTTTCACCTACTGGTACCAGGTACCAGTAT GAATATACTATCTTTGGCTTGCTCAATGGACGAACTCAACTTGGAATGCA TGTGAACTATATTTAAGTATCTGGCTGTACCACACTGCCTGTAGAGCTAA TGTTTGAAGCAAAATATCTGCCATCGTTCACGTCTGCGGACGCCCGTATC AATACCCTTCCCTGGGACCACCGTACTCGACTTGGACTTGGGCCGTCGCA GGAGATGCCGAGAACGACGTGGACATGTTGCATCTAGCGGGCGTTGGGGT GTGCGTTGGAAATGCATCCCCCCCGGCAAGGACAGCGGCTCGCTTCGTCG CGCCGACGAACGAGGAGGATGGTGCCGCTGTTGCTTTGGAGCGAATAATG CTCGAGGGTAGAAATAAACCCACCCAGTAAGACAAACCCTCCCCATCGAT GATACTCCTTTCAAGGAGTGTGCTTGCTTGGCTCGACTCGGTGGGTTGGC CTCCTGGCAGGTCTCGTCTCCACAGAATTAAAATATTGTCTCGTTACATC ATTTAGACTGTGCAGCTCTATATGCGACAGGAATTTAGTTGCCGCTTTCT AGACTCGTACTTCAGTATCAAGTTGGCAAATCAGCAGGAACATCCATGTT CCGATAAGCTTCGTGGTTTCGTATCCCCGTTTTCCTTGTATCCCCGTTTT CCTTGTATCCGTGCTGTGCTGTACCGTACCACAAGGTACCGTGGATTTAT GTGCCGTACCGTACCGGGTTGCGTTCCACGATTCTTGGGCAGATTCGTGA CCAATGCCAGCGTGAATGTTAGACGCTCTCGAATCGTATATTACCGTGCA AATCAGTCGGTACCGTGGCTCCTCGGCCCGTGGGGTGCGAGTCTCAATCC AGATCATCATCAGCTTATGTTTAAGTATACAGTGTGTTAAACGTGGTAGT TTATAGTCAAATTTTTGATGGAACCACCATTACCACAAGAGTCCTTTGAG GCGTTCC
back to top

Coding sequence (CDS) from alignment at F-serratus_M_contig95:702471..712627+

>mRNA_F-serratus_M_contig95.20855.1 ID=mRNA_F-serratus_M_contig95.20855.1|Name=mRNA_F-serratus_M_contig95.20855.1|organism=Fucus serratus male|type=CDS|length=2226bp|location=Sequence derived from alignment at F-serratus_M_contig95:702471..712627+ (Fucus serratus male)
ATGGTACGATTCAATACGCGGCTGTGTCTTGGGCTCCTCCCAGCCACCGT
GGTGGCGGCCTCGTCAGCACTAGGTCGCGCGGGCCATCGGTCGACGTACT
ACCACTGCTACCGTCGTCGCCCGTCAGTTGCCTTCGGTTGGTCATCTCGC
CTCTCGTCTGATGACTCAGCAGGAGAGCGGCCTACAAGTCCAAAGCCATT
GCAGAGCGCTGTCAAAAGCGGCTCGGTGTCTAGGCCGCAGGAGTTTTCCG
CTGCTCCATCATCCTTACTCGCGTCAGTGGAGGCTGTTGCGAGCGACGTG
GACGGTACTTTAACGAAGCAGCACTCGACAGTCTCGAAGCGAACGGTTGC
GGCGGTGAAAGCGGTGCTGGACTCGGAGGTATTGTTCTTCCCGGCCACTG
GGAAGATGGTACGATTCAATACGCGGCTGTGTCTTGGGCTCCTCCCAGCC
ACCGTGGTGGCGGCCTCGTCAGCACTAGGTCGCGCGGGCCATCGGTCGAC
GTACTACCACTGCTACCGTCGTCGCCCGTCAGTTGCCTTCGGTTGGTCAT
CTCGCCTCTCGTCTGATGACTCAGCAGGAGAGCGGCCTACAAGTCCAAAG
CCATTGCAGAGCGCTGTCAAAAGCGGCTCGGTGTCTAGGCCGCAGGAGTT
TTCCGCTGCTCCATCATCCTTACTCGCGTCAGTGGAGGCTGTTGCGAGCG
ACGTGGACGGTACTTTAACGAAGCAGCACTCGACAGTCTCGAAGCGAACG
GTTGCGGCGGTGAAAGCGGTGCTGGACTCGGAGGTATTGTTCTTCCCGGC
CACTGGGAAGACGCGCGCAGGTATGTACGAGATTCTGGGAGAAGAAATAA
GCTCCCATCTGAGAGCCAAGAACGCTCCAGGCGTCTTCATTCAGGGCCTT
GTTGTCTACTCAGGTTCGGGAAACGAGGTGCTGTACGAGCGCCTCTTGGA
TGCAAGCATTGTGGGTGAGGTGGCGAGTTTCTGCGAGGAGGAAGGTGTCT
CCCTCATCGCCTACAGCGGCGACAGCATCACGCGCGCAGGTATGTACGAG
ATTCTGGGAGAAGAAATAAGCTCCCATCTGAGAGCCAAGAACGCTCCAGG
CGTCTTCATTCAGGGCCTTGTTGTCTACTCAGGTTCGGGAAACGAGGTGC
TGTACGAGCGCCTCTTGGATGCAAGCATTGTGGGTGAGGTGGCGAGTTTC
TGCGAGGAGGAAGGTGTCTCCCTCATCGCCTACAGCGGCGACAGCATCGT
ATGCTCCACTAAGGACGAGCACACCGACGAGATAGCAAAATACAAGGAAC
CCATGCCGGAGGCAGTTGGTCCGCTCGTCGACGCCATGGCGCGTGGCCTG
AGGATCCACAAGCTTATTCTCATGGACACGAAAGAGACGATCGATCGAGT
GCGGCCGAAGATGAAGCGAGTGGTCGGCGACCACGGAACTCTCACGCAGG
TATGCTCCACTAAGGACGAGCACACCGACGAGATAGCAAAATACAAGGAA
CCCATGCCGGAGGCAGTTGGTCCGCTCGTCGACGCCATGGCGCGTGGCCT
GAGGATCCACAAGCTTATTCTCATGGACACGAAAGAGACGATCGATCGAG
TGCGGCCGAAGATGAAGCGAGTGGTCGGCGACCACGGAACTCTCACGCAG
GCCTTGCCAGGAATGTTGGAAGTGCTGCCGCCGGGAGCTTCCAAAGGCAA
CGGGGTGGAAATCCTGCTGAAGCACTTGGGGATTGACCCCGTCCGTTTGA
TGGCACTAGGCCTTGCCAGGAATGTTGGAAGTGCTGCCGCCGGGAGCTTC
CAAAGGCAACGGGGTGGAAATCCTGCTGAAGCACTTGGGGATTGACCCCG
TCCGTTTGATGGCACTAGGAGATGCCGAGAACGACGTGGACATGTTGCAT
CTAGCGGGCGTTGGGGTGTGCGTTGGAAATGCATCCCCCCCGGCAAGGAC
AGCGGCTCGCTTCGTCGCGCCGACGAACGAGGAGGATGGTGCCGCTGTTG
CTTTGGAGCGAATAATGCTCGAGGGTAGAAATAAACCCACCCAGTAAGAG
ATGCCGAGAACGACGTGGACATGTTGCATCTAGCGGGCGTTGGGGTGTGC
GTTGGAAATGCATCCCCCCCGGCAAGGACAGCGGCTCGCTTCGTCGCGCC
GACGAACGAGGAGGATGGTGCCGCTGTTGCTTTGGAGCGAATAATGCTCG
AGGGTAGAAATAAACCCACCCAGTAA
back to top