mRNA_F-serratus_M_contig943.20799.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig943.20799.1
Unique NamemRNA_F-serratus_M_contig943.20799.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
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BLAST of mRNA_F-serratus_M_contig943.20799.1 vs. uniprot
Match: D8LFT3_ECTSI (Mediator of RNA polymerase II transcription subunit 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFT3_ECTSI)

HSP 1 Score: 271 bits (693), Expect = 1.900e-85
Identity = 147/200 (73.50%), Postives = 172/200 (86.00%), Query Frame = 3 
Query:   39 MAEVARTLSLLRKEILITDEVLGALSRCQSGTKLDTDARNGIKEALVLLQGEEEKLVKAGEAVNAHQCLHADVEALRRQVRSEERRVQDCARHLTEADSVLRGPLQDAKRILEAGRQAEAAEIRVRDVVDYAQRISGITSAPSYWKPGMAMVGFAPPAPRPEMMRAGALSAFADALG-NSLPADDLLRLVQDLDRPPRKT 635
            MAEV+R LSLLR+E  I DEVLGAL+RCQSGTKLD +AR  I++ALVLL G+E KL KA EA+  HQ LHA+VE+LR++VR  E++VQDCAR LTEAD+ LRGPL+DAKR+LEAGR+AEAAEI VRD+VDYAQRISGITSAP+YWKPGMAMVGFAPPAPRPEMMRAGALSAFA + G +SL   +LL L +DLDRPP +T
Sbjct:    1 MAEVSRVLSLLREETSIADEVLGALARCQSGTKLDANARAAIRKALVLLNGKEAKLTKASEALREHQQLHAEVESLRQEVRYGEQQVQDCARKLTEADAALRGPLRDAKRLLEAGRKAEAAEIDVRDIVDYAQRISGITSAPAYWKPGMAMVGFAPPAPRPEMMRAGALSAFAVSPGTSSLSLPELLTLARDLDRPPDQT 200
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BLAST of mRNA_F-serratus_M_contig943.20799.1 vs. uniprot
Match: A0A7S3UVI8_HETAK (Mediator of RNA polymerase II transcription subunit 4 n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UVI8_HETAK)

HSP 1 Score: 87.4 bits (215), Expect = 4.100e-16
Identity = 48/113 (42.48%), Postives = 67/113 (59.29%), Query Frame = 3 
Query:  294 RVQDCARHLTEADSVLRGPLQDAKRILEAGRQAEAAEIRVRDVVDYAQRISGITSAPSYWKPGMAMVGFAPPAPRPEMMRAGALSAFADALGNSLPADDLLRLVQDLDRPPRK 632
            R +D A  L+  +  LR  L+  K +++A R A A  + ++ +V YAQRI G T+AP YWKPGM MVGF PPAP PE +RAG+  A+A+ L      DD      + ++P  K
Sbjct:   76 RARDLASALSSKEKDLRIALRKVKPVVDAARLANANPVSLKGLVAYAQRIGGTTAAPPYWKPGMPMVGFIPPAPLPEQIRAGSFHAYANGLKKVDLKDDSAASATETEKPGNK 188
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BLAST of mRNA_F-serratus_M_contig943.20799.1 vs. uniprot
Match: A0A835YUZ4_9STRA (Mediator of RNA polymerase II transcription subunit 4 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUZ4_9STRA)

HSP 1 Score: 85.5 bits (210), Expect = 1.760e-15
Identity = 46/81 (56.79%), Postives = 56/81 (69.14%), Query Frame = 3 
Query:  306 CARHLTEADSVLRGPLQDAKRILEAGRQAEAAEIRVRDVVDYAQRISGITSAPSYWKPGMAMVGFAPPAPRPEMMRAGALS 548
            C   +  A + LR  L+ A++ L    +A AA + V D+V YAQRISG TSAP+YWKPGM MVGF PPAP PEMMR GAL+
Sbjct:   59 CVAAIAGASADLRHALESARKSLGEFDKACAAGVAVSDIVAYAQRISGTTSAPAYWKPGMPMVGFLPPAPLPEMMRMGALT 139
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BLAST of mRNA_F-serratus_M_contig943.20799.1 vs. uniprot
Match: A0A1V9Y9L5_9STRA (Mediator of RNA polymerase II transcription subunit 4 n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Y9L5_9STRA)

HSP 1 Score: 77.0 bits (188), Expect = 4.920e-12
Identity = 42/116 (36.21%), Postives = 67/116 (57.76%), Query Frame = 3 
Query:  204 LVKAGEAVNAHQCLHADVEALRRQVRSEERRVQDCARHLTEADSVLRGPLQDAKRIL-EAGRQAEAAEIRVRDVVDYAQRISGITSAPSYWKPGMAMVGFAPPAPRPEMMRAGALS 548
            L++  + +NAHQ    +++ L+ Q+  +E ++ + AR L      +   L   KR+L  A     A  +  +D++ YA +++  +SAP+ W+PG  M GF PPAP PEMMRAG LS
Sbjct:   59 LLQTVKQLNAHQVAQKELDRLKAQIAEKEAKIVNYARALRSGQKAISNVLLKHKRVLTNAKASPSATHLAPQDIIAYAHKVASTSSAPAGWQPGFPMFGFMPPAPTPEMMRAGVLS 174
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BLAST of mRNA_F-serratus_M_contig943.20799.1 vs. uniprot
Match: A0A024TZF4_9STRA (Mediator of RNA polymerase II transcription subunit 4 n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TZF4_9STRA)

HSP 1 Score: 76.6 bits (187), Expect = 6.800e-12
Identity = 45/125 (36.00%), Postives = 73/125 (58.40%), Query Frame = 3 
Query:  180 LLQGEEEKLVKAGEAVNAHQCLHADVEALRRQVRSEERRVQDCARHLTEADSVLRGPLQDAKRILEAGRQAEAAEIRVR--DVVDYAQRISGITSAPSYWKPGMAMVGFAPPAPRPEMMRAGALS 548
            L+  ++++L+   + +N HQ    +++AL+ Q+  +E+++   A+ L      +   L   +R LE   Q  ++++ +   +VV YA +I+G TSAP  WKP   M GF PPAP PEMMRAG LS
Sbjct:   49 LVVAKDKQLLNTVKQLNQHQSAQKELDALKAQIADKEQKIVRYAKELRSGQQSIASALAKHRRTLEQCHQDSSSKVVLDPLEVVAYAHKIAGSTSAPPNWKPEYPMFGFVPPAPTPEMMRAGVLS 173
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BLAST of mRNA_F-serratus_M_contig943.20799.1 vs. uniprot
Match: A0A6G0X371_9STRA (Mediator of RNA polymerase II transcription subunit 4 n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X371_9STRA)

HSP 1 Score: 75.9 bits (185), Expect = 1.240e-11
Identity = 43/125 (34.40%), Postives = 75/125 (60.00%), Query Frame = 3 
Query:  180 LLQGEEEKLVKAGEAVNAHQCLHADVEALRRQVRSEERRVQDCARHLTEADSVLRGPLQDAKRILEAGRQAEAAEIRV--RDVVDYAQRISGITSAPSYWKPGMAMVGFAPPAPRPEMMRAGALS 548
            L+  ++++L+ + + +N HQ    +++A++ Q+  +E+++   A+ L      +   L   +R L+   Q    ++++  RDV+ YA +I+  TSAP+ W+PG  M GF PPAP PEMMRAG LS
Sbjct:   50 LVVEKDKQLLHSIKQLNKHQAAQKELDAIKAQIADKEQKIIRYAKELRSGQQAISSVLAKHRRTLDQCAQDAPNKVKLAPRDVIAYAHKIACTTSAPANWQPGYPMFGFMPPAPTPEMMRAGVLS 174
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BLAST of mRNA_F-serratus_M_contig943.20799.1 vs. uniprot
Match: A0A8K1CAS9_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CAS9_PYTOL)

HSP 1 Score: 75.9 bits (185), Expect = 1.370e-11
Identity = 43/115 (37.39%), Postives = 69/115 (60.00%), Query Frame = 3 
Query:  204 LVKAGEAVNAHQCLHADVEALRRQVRSEERRVQDCARHLTEADSVLRGPLQDAKRILEAGRQAEAAEIRVRDVVDYAQRISGITSAPSYWKPGMAMVGFAPPAPRPEMMRAGALS 548
            L+ A + +  HQ    ++ A++ ++  ++++V   A  L ++   +   L+  +R+L+  RQ +   +  RDVV YA RI+G TSAP  W+PG  M GF PPAP+ +MMRAG LS
Sbjct:   58 LLSAVKTLVQHQVAQKELLAVQDEIHEKKQKVVRYAAQLRQSQEDIALVLKKHRRVLDHARQKQKVLLDPRDVVAYAHRIAGTTSAPKEWRPGFPMFGFMPPAPQEQMMRAGVLS 172
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BLAST of mRNA_F-serratus_M_contig943.20799.1 vs. uniprot
Match: A0A067BXL3_SAPPC (Mediator of RNA polymerase II transcription subunit 4 n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067BXL3_SAPPC)

HSP 1 Score: 74.3 bits (181), Expect = 4.020e-11
Identity = 39/116 (33.62%), Postives = 68/116 (58.62%), Query Frame = 3 
Query:  204 LVKAGEAVNAHQCLHADVEALRRQVRSEERRVQDCARHLTEADSVLRGPLQDAKRILE-AGRQAEAAEIRVRDVVDYAQRISGITSAPSYWKPGMAMVGFAPPAPRPEMMRAGALS 548
            L++  + +NAHQ    +++ ++ Q+  +E ++   AR L      +   L   +R+L  A   +  + ++ +D++ YA +++  +SAP+ W+PG  M GF PPAP PEMMRAG LS
Sbjct:   60 LLQTVKQLNAHQAAQKELDNIKAQIAEKEAKIVQYARELRGGQKAISNVLLKHRRVLSNAKASSTTSHMKPQDIIAYAHKVASTSSAPAGWQPGYPMFGFMPPAPTPEMMRAGVLS 175
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BLAST of mRNA_F-serratus_M_contig943.20799.1 vs. uniprot
Match: W4FJC9_9STRA (Mediator of RNA polymerase II transcription subunit 4 n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FJC9_9STRA)

HSP 1 Score: 73.9 bits (180), Expect = 6.770e-11
Identity = 43/125 (34.40%), Postives = 73/125 (58.40%), Query Frame = 3 
Query:  180 LLQGEEEKLVKAGEAVNAHQCLHADVEALRRQVRSEERRVQDCARHLTEADSVLRGPLQDAKRILEAGRQAEAAEIRVR--DVVDYAQRISGITSAPSYWKPGMAMVGFAPPAPRPEMMRAGALS 548
            ++  ++++L++  + +N HQ    +++AL+ Q+  +E+++   A+ L      +   L   +R L    Q  A+++ +   D+V YA +I+G TSAP  W+P   M GF PPAP PEMMRAG LS
Sbjct:   48 MVVAKDKQLLRTVKQLNQHQTAQKELDALKAQIADKEQKIVRYAKELRSGQQSIASVLAKHRRTLTQCAQDAASKVVLDPLDIVAYAHKIAGSTSAPPNWQPEYPMFGFVPPAPTPEMMRAGVLS 172
[Close]
BLAST of mRNA_F-serratus_M_contig943.20799.1 vs. uniprot
Match: A0A1V9Y7Z7_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Y7Z7_9STRA)

HSP 1 Score: 74.7 bits (182), Expect = 8.800e-11
Identity = 53/158 (33.54%), Postives = 82/158 (51.90%), Query Frame = 3 
Query:   96 EVLGALSRCQSGTK------LDTDARNGIKEALVLLQGEEEKLVKAGEAVNAHQCLHADVEALRRQVRSEERRVQDCARHLTEADSVLRGPLQDAKRILEAGRQA-EAAEIRVRDVVDYAQRISGITSAPSYWKPGMAMVGFAPPAPRPEMMRAGALS 548
            ++L ALS   S T        D+   + +K+  VLLQ      +K    +N HQ    +++ +++Q+  +E ++   A+ L      +   L   KR+LE  + A        +D++ YA +++  TSA   W+PG AMVGF PPAP PEMMRAG LS
Sbjct:   28 KLLDALSHASSNTTPSILRTTDSLFEDVLKKDRVLLQ-----TIKQ---LNQHQRAQKELDRIKQQIAEKEAKIVAYAKELRTGQQAINSVLLKHKRVLENAKAAPNTPRFPPQDIIAYAHKVASTTSAALNWQPGFAMVGFLPPAPTPEMMRAGVLS 177
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig943.20799.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 20
Match NameE-valueIdentityDescription
D8LFT3_ECTSI1.900e-8573.50Mediator of RNA polymerase II transcription subuni... [more]
A0A7S3UVI8_HETAK4.100e-1642.48Mediator of RNA polymerase II transcription subuni... [more]
A0A835YUZ4_9STRA1.760e-1556.79Mediator of RNA polymerase II transcription subuni... [more]
A0A1V9Y9L5_9STRA4.920e-1236.21Mediator of RNA polymerase II transcription subuni... [more]
A0A024TZF4_9STRA6.800e-1236.00Mediator of RNA polymerase II transcription subuni... [more]
A0A6G0X371_9STRA1.240e-1134.40Mediator of RNA polymerase II transcription subuni... [more]
A0A8K1CAS9_PYTOL1.370e-1137.39Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A067BXL3_SAPPC4.020e-1133.62Mediator of RNA polymerase II transcription subuni... [more]
W4FJC9_9STRA6.770e-1134.40Mediator of RNA polymerase II transcription subuni... [more]
A0A1V9Y7Z7_9STRA8.800e-1133.54Uncharacterized protein n=1 Tax=Thraustotheca clav... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig943contigF-serratus_M_contig943:265378..275526 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score80.5
Seed ortholog evalue1.5e-12
Seed eggNOG ortholog112098.XP_008616344.1
KEGG koko:K15146
KEGG Pathwayko04919,map04919
Hectar predicted targeting categoryother localisation
GOsGO:0000428,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005667,GO:0006355,GO:0006357,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0016591,GO:0016592,GO:0019219,GO:0019222,GO:0030880,GO:0031323,GO:0031326,GO:0031974,GO:0031981,GO:0032991,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044451,GO:0044464,GO:0044798,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0055029,GO:0060255,GO:0061695,GO:0065007,GO:0070013,GO:0070847,GO:0080090,GO:0090575,GO:1902494,GO:1903506,GO:1990234,GO:2000112,GO:2001141
EggNOG free text desc.Vitamin-D-receptor interacting Mediator subunit 4
EggNOG OGs2CMF1@1,2QQ6I@2759
Ec32 ortholog descriptionMediator complex, subunit Med4
Ec32 orthologEc-01_001020.1
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03021
Exons5
Model size1123
Cds size885
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932701.4293885-UTR-F-serratus_M_contig943:265377..2655771622932701.4293885-UTR-F-serratus_M_contig943:265377..265577Fucus serratus maleUTRF-serratus_M_contig943 265378..265577 -
1690964430.2114832-UTR-F-serratus_M_contig943:265377..2655771690964430.2114832-UTR-F-serratus_M_contig943:265377..265577Fucus serratus maleUTRF-serratus_M_contig943 265378..265577 -
1622932701.5300107-UTR-F-serratus_M_contig943:275488..2755261622932701.5300107-UTR-F-serratus_M_contig943:275488..275526Fucus serratus maleUTRF-serratus_M_contig943 275489..275526 -
1690964430.2845123-UTR-F-serratus_M_contig943:275488..2755261690964430.2845123-UTR-F-serratus_M_contig943:275488..275526Fucus serratus maleUTRF-serratus_M_contig943 275489..275526 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932701.4500575-CDS-F-serratus_M_contig943:265577..2659331622932701.4500575-CDS-F-serratus_M_contig943:265577..265933Fucus serratus maleCDSF-serratus_M_contig943 265578..265933 -
1690964430.2271237-CDS-F-serratus_M_contig943:265577..2659331690964430.2271237-CDS-F-serratus_M_contig943:265577..265933Fucus serratus maleCDSF-serratus_M_contig943 265578..265933 -
1622932701.4705849-CDS-F-serratus_M_contig943:266245..2664131622932701.4705849-CDS-F-serratus_M_contig943:266245..266413Fucus serratus maleCDSF-serratus_M_contig943 266246..266413 -
1690964430.23911-CDS-F-serratus_M_contig943:266245..2664131690964430.23911-CDS-F-serratus_M_contig943:266245..266413Fucus serratus maleCDSF-serratus_M_contig943 266246..266413 -
1622932701.4836092-CDS-F-serratus_M_contig943:266692..2668661622932701.4836092-CDS-F-serratus_M_contig943:266692..266866Fucus serratus maleCDSF-serratus_M_contig943 266693..266866 -
1690964430.2485712-CDS-F-serratus_M_contig943:266692..2668661690964430.2485712-CDS-F-serratus_M_contig943:266692..266866Fucus serratus maleCDSF-serratus_M_contig943 266693..266866 -
1622932701.4998627-CDS-F-serratus_M_contig943:267299..2673971622932701.4998627-CDS-F-serratus_M_contig943:267299..267397Fucus serratus maleCDSF-serratus_M_contig943 267300..267397 -
1690964430.2652848-CDS-F-serratus_M_contig943:267299..2673971690964430.2652848-CDS-F-serratus_M_contig943:267299..267397Fucus serratus maleCDSF-serratus_M_contig943 267300..267397 -
1622932701.5144358-CDS-F-serratus_M_contig943:275399..2754881622932701.5144358-CDS-F-serratus_M_contig943:275399..275488Fucus serratus maleCDSF-serratus_M_contig943 275400..275488 -
1690964430.2748811-CDS-F-serratus_M_contig943:275399..2754881690964430.2748811-CDS-F-serratus_M_contig943:275399..275488Fucus serratus maleCDSF-serratus_M_contig943 275400..275488 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig943.20799.1prot_F-serratus_M_contig943.20799.1Fucus serratus malepolypeptideF-serratus_M_contig943 265578..275488 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig943.20799.1

>prot_F-serratus_M_contig943.20799.1 ID=prot_F-serratus_M_contig943.20799.1|Name=mRNA_F-serratus_M_contig943.20799.1|organism=Fucus serratus male|type=polypeptide|length=295bp
MAEVARTLSLLRKEILITDEVLGALSRCQSGTKLDTDARNGIKEALVLLQ
GEEEKLVKAGEAVNAHQCLHADVEALRRQVRSEERRVQDCARHLTEADSV
LRGPLQDAKRILEAGRQAEAAEIRVRDVVDYAQRISGITSAPSYWKPGMA
MVGFAPPAPRPEMMRAGALSAFADALGNSLPADDLLRLVQDLDRPPRKTS
QRTAGQSVNGVEGTDDLSSQDSEKDEKGGRSSFSSTGERKKGGERRTAKG
DEKSVPTKLKRETSVNFGREDPPKRPKISLDLDDLDSDSEEDDE*
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mRNA from alignment at F-serratus_M_contig943:265378..275526-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig943.20799.1 ID=mRNA_F-serratus_M_contig943.20799.1|Name=mRNA_F-serratus_M_contig943.20799.1|organism=Fucus serratus male|type=mRNA|length=10149bp|location=Sequence derived from alignment at F-serratus_M_contig943:265378..275526- (Fucus serratus male)
TGTCGACGTTGCTCTAATTCGTACGCTGGGCGGATATCATGGCGGAAGTA
GCGCGCACGCTTTCCCTCCTCAGGAAAGAGATATTGATCACGGATGAGGT
GCTGGGCGCGCTCAGCAGGTGTCAAAGGTAAGTTGTTAAACATATAATAT
GGAAGAATTCAGTACGTTTACCTTTCTCGTACAAACTATTACTGTATTTA
TTTATAACTTGCGGGGGAAATGGGACGATCCGGACGATCCTTACTAACCA
CTGGAAGGATGGTAACGTTGCAGTAGGTCGTAGAAGCGAGCTAGCGCGTT
GAGGTCCATCGACCGTAAGTGATACACACATACCAGCACCATTGATCCTC
ACCTGCGAGGACCAATGCGATTACTATTTGAATCATAGAAGTACCTCTGG
AATATAATACAATAGCAATAGGGCCGGATTGTGCCGTGATGTGCAAGTAT
TCCGGTACGTCTCCCGTTAAAACATCCAACTGGAGGCAGAATTGCCTTGG
TTTCCGGCAATCGATCTCCTGCGGAAATATCCAGCATAAGGAAGTCATTC
CTGTGCTCCAGTAATTTCAGTAATCTTCCACTACTCACGAAACGTGCCTT
TCGAAAATAGGCAGCGTGAGGCAGCCTTGCTGGACTATTATTTCAGTAGT
ACGAAAAGTATCGGCGTTTGGTACTGAAATTGTACTTGATGTACCGGGTA
CAAACAGTAGTGTTACAATCGTGTCGAGCCGTCGGATCCAAATCAATAGG
TATGACTGTAAGGAGCTGGACAGCGAACCCGCTCGGTGCGATGCAGCCAC
GAGTTGTGTAATGCAATGATCTTCACCTGTTTAGTCGGCGAAGTCGGGAT
AAAGGTAACAGAGCTTACAGGCAGTTCAATCAGTAACTCGAGAACAATAC
GGTAAATGCAGGACGACGTAAAACTACTACAAAACAGTAGTCTATTAGAG
TGTACCAGGTACACATACGAGCCTGAGATGGCAACTCGTGCTTACATGTA
CTGTACCAGGTATGTATCTATGTATGTGTAGTCACACACAAAACAAGAGT
AGGGATCAATGAGGTAAGGTTGCCGGTCCTGCACGTGGTCAGCTGAACAG
GAAAATGAATATTTCCCTGTCCGCGTTCGATGCTGAGATTTGGGTCTCGC
GAGACGGGTTCGACAGTCCCGTCCCGCGGCAGCCTGCTCATCTCCATGCT
CAGGCTGAATCTGTTGCTTACTTATGGGATTCCTTCCGAGTTCCGCGGCG
GCGTCCATACTCGAGAACAATTCGGTAAATACAGGACGACGTAAAACTAC
TCTTACAGTGTACCAGGTACACATACGAGTCTGGGATGGCAACTCGTGGT
ACAGGTATATATTAATAGTATTATAGTACAAGAACATGCACCAGGTGCTC
TATCCGTATCTCTTGAGGACGATTACCCGCACCTCGTCCGAGTATTAATA
TGATCCCGTAGTATATACGTATTTGATGGTGGTCGTCACGCCCAGGAGAG
GTTGGGCATCAATTGCTAATTCTGCTTGTCAGATCAGCTGATCAGGGAAA
ATAAATGAACAGGAGACCCCTGTCCCCGTTCGCCTGAGGATTCCTTCCTC
CCACATTCCGTGAGGGTATCCCTGCCCATCAAACCGTCAATCGCCATCGA
GACAGTCCCGAGTTGATCAGGTCACACATTTGGTACCGATGACGTTCACT
GCCGACAGTCCGCCGGTCCAGCGTCAGTATTTCCACGAGGTCGCTCGAGT
AATGGATGCTACAGTTAGTACTGTACTGTACCTATTCAGGTCACCCCGTG
GACAAATTAATGTGCGCTCCTTTTTCACACGGTACACCAGTTTCATTATA
ACAGGGTATCTTGCACGGATTGTGGTACATTGGGTGGGCCCCTGTCAGCC
CCCCCTGATCCCCAGGCAGCAAGAAGGGGGGTATTCACGCGCATATAACC
CCCCCCCGGCTCAAAGGGGCATTGCTGACTATGACGTTTTCTGCCTTAGA
ACGGCGTCAATAACTCCTCCCCCCCACCACCCGGCTTAAAGGGGTTCAAT
GCTGACTTGGGAGTTTCCTGCCTTGCGTGACCGGAACAGTTATTCTAAGG
AGCCGATGCGAGGGTTCGAGGGCAGTGCGGCTACTCTGGAGCAGAGCACA
CCAGCAGCAACAGCACAGTCACATGTACACGTAAAAATATCAAGTTTCCC
TGTTCAGCTGACCACGAGTAGGATTGACAACCTTATCCAGTTGATCTACG
CTGTACTCTGCTGTAAGGGGTTGTCATACATACATACGCGCTGAGGTACT
GCATTCCCGCAAACAAAACATAGCTGTGGCATGGGCAAAGAGATGCGCGT
ATCTACTGATACTTTTCTGCGCATTGGTCGTAGAAAGGTTATCAAGTCTT
GTCGTACTGCTTTTGCGACTTAGCCAAGCTGGCCTGAAAGAACGCATCTA
ACCTTGCGTAAAGCGTTGCTTGCGTCCTCAATAACTCGTGACTCTGCCAT
ATCCTCCAGAAATCACTAATCTGCTCTGCAGCCTCTGTGTACGGTGGGGG
TGCAAACGTTCCCCCGTGTTGTGTCTCTGCCGCCGCGCGTGAACCCTCCC
AATGGTGTCGATTTTCTTGAGCATGGTGTTCTCCTTCCAGATGTTATTGA
GCTGGTCTTCCCAACACTCAAACACAATATGGAGCGCCGTATATGTCTAC
CCTTCCCTTTGGTTCAATCGAGTCTAGCCCGCTTCTTCCCTGGAGGAGCA
CAGCCGTAACTACCAAGTGTTGGCGCCTTTCGCTTGCCCTTGTTGTCATC
CGTGGGACCACCACCGGTGGTACCGCCAGCTTCAGCTGCCGTGAAGCAAG
TTGGACACATGCGATGCATATCGTTCTAGTTGGCGTGTTGGCACCCACAC
AGGGCATGAAGGCGACCGCCACATCCGTCTCAACATTCTTGGTCATCACC
GACATCGGCGGGGGTACCATCACGTTGTCACTTGTATCCAAATCCTGCCG
CGCACGACATGGTTGCGCGGTTCAGCCCCGACATCCTGAAACCGCCATTT
AAACAGATTACAAAGGCTTGATTTGGCGGGATTTGGAGTTGAGCCTCTTT
AGGTGGAGAGGGGGGTAAAAGACTGCATCACGTATACCAGCAGTTATGGG
GTGGGCTTATCGCGGCCCAGGCGTTTGTATGAATGTATCTTGATTACTGA
TAATATATTATGGATCAGCCGGGTAAGGTTGCCAATCCTGTTCGTGATCA
GGTGAACAGGGAAAATGAACATTTCGCTGTCCTCGTTCACGCCAGAGAAT
TTCGTTTCGCGAAATGAGTTCGGCGGTCCCATCCCGCGTCAGTCTGCTCA
TTCTCCATACTCAGGCCGAATCTGGTGCTAACTTAAAGGATTCCTCCCTA
TTTTCGCGGCGGCGTCCATTTCCTTAAACCGCCATACACCATCGGGTCAG
TCCCGAGTTTATCGGGTCACGCACTTGCGTACCGATGGCGTTCGCTGCCG
AGAGTCCGCCGGCACAGGGCCACTAATCCTCAAGGTAATTCCAGTAGCGG
GTGCTGTCTTTGCATCACCATGGACTATGACCAATTAATGTGCGTCTCTC
TTTTCCCACACCCACTATACTAATATTGGTATGAAATGGGCATGTTGAAA
GTATCGGAGGCGGATTATAAAGGGGGGGATTAAAGGCGCCCAACTACTTT
GCCTGGTACCAGTATTAATAGTGTAGTATTAATATGTTAATATTAATAGT
ATGTTAATAGTATATTAATAGTATATTAACCGTGTATCAATAGTACATTA
ATTGTATTTATACTTGGTGTTCTTGTCTGGGTACTGTTGCGACGTGTACA
AGTATTAATAGTTCAGATCCATACGAATAAGTACGAGTTGTCTTTCTCCC
AAAGAATATATATGTTGTGTGACTGCACAGCGCAAGCTTCAAACGCAAGG
TGCGACGAATATAACAGTGTGAGTACGAGCGCACAGCTCCTGCCCTGTAT
GGACGTAGCTGTCATTGTTGTTTCGAGGGCGCAGTTCACATGACATCTGG
GTACCGTACTTGCTTGTACTCTAGCTTTCCAATCTATACTGCCTTCAGTT
GTTGTTGTTCTTGATTCACACATGCAGCGTATTGTCCTTGCAACTGAAGA
AACTACGGTGACACAACAAGTCAGCCATAGACCTATCAAATGCTAATCCC
GCTTGTGGTCACAAAGAGGTGCAAAGGTCAACGGGCCACATCATGGTGAC
AACCCGCTACTCAGACCAACAGGGATTCAAATCGCGACAAAAAGTTATGC
GACTCTAAAAGCAATGGCACCGACCAATATCAAAACGGTTAATCAAAACA
TCCTTACTCCGTAATCGAGAGCAACCTCGATCGACTCGGATTGTTGTCGC
CTACCCACGACCAGCGTTCTCAGCTAAAAACCCCGGAAGAATTACGCTCC
AACCAGTTTTGATCAACAAGAAGTCCAAGTTTCTCAAGGCCACGCAATCG
TACAGAAATAAGGAAAAATGAAATACCGAGGTCCATACTGCTGCATTTGC
CTTGTTCAAGACCGTGTGGTATCTCCCTGTTTTTCATCGCTTCCTTCGTA
TCATTTTACCTGCTGTCAATAATACATACTATACCAGGGTACTTGTTTCG
TGTTTGTAATTTTCTGCTTCGAAATCTAGACTATTTGTCTTTCAGCACAT
ATCATGCCTTGCCCTTGTTTACTAGAGTATAATACCAAGTACTCCTCTGA
ATTGTCCAATGAATTAACTATCTTGTTCTTTGTCGGATGCTTTGCACGAT
TTATTTTATATTTTGGTTCGAAAAGCTGACATTCCTCTCGTAAAAGTCCA
GGTGAATTGATCTTTGTTGTACTCGAGGGCGTACTATTAATAAGAGAAAA
CTGCAATATGGGATGGAAAGAGCAATACGAAAAACTTAAGAGAGTACATG
GACGAATACACTATACAGTTCAGTATTTGATTAAGCCTGGTCCCGTAGTG
CTTGACAGCCTGACACACGGGAAAAAGTTAGAAGAACGTGTTGTTATTAA
TAGCTTGGGGAGATAAAAAGCAAGTGCCGAAACAGGCCAACACGTGAAAA
AACATACCAGCGATAGTTATTCCCCGATCATGACGACCTCATAGGGTGTA
GCAGCCCGAGATTATCCCAGAATATCTACGAAGCGATCTCTGTAATCCAA
TGACAACGAGTAAGAGTAAGAGGCACAATCGAACACCCTCCCCGCATCCC
AACGAGAGTCGCTATAATAGCTAAAGGCTTGTAAGCGGTCCCCTTAAAAA
ACACGAAACCTGTGCAGTATTACGAAGATTAGACGATGACCCGGCTGTTC
GGGACGGAATCTGAAAAAAACGCCCTCAACAAGAACTTGCACTCAGCTCA
GAAACAAAGCGAGCCACTTCGGCAAATCCATTAGGAAAGAACGGCGTTTA
TTAATAGGGAACGCTTCCGGCCCAAGAGGCTATGTCGGAATTTCAATATA
TTGGTATTAAATAGTAAGACTCTTTTGTCCTGGATAGTTAAGATCTTGCG
ATTCTTCAAGTCTCTGATGAAGTGATACCAGTACTGTACGTGACTGTGCT
TCGTCCGCCCTCACGTCGATCCGCCATCTGCCATAGCGATCGCCCGCTGA
TTGTGTGCTCAAACACATGAGTAACCTCGCTCAACGAGCTGGGGTTGCAG
TACGGCTTGCGTAAACCACACGCAATTTGCCCCTTGCGTCAAGGCTACGT
AAAAAAAGCAAATACGACCACCGAGCTTAGGTGCTCGAGTTTCTGTTATC
GGAGAGAGAGGTTTCCCGTGTCTGTTGACCATAGAGCACCCTTAGCTTTG
CCGAGAACGTGGTACTAGACAGTAATTGGAGTTCACTACGGAACCAGACC
TAATCTAATAGAAGTACTAGTAATAGTGTCGTGGTCAAACGACTATTAAT
ACAATTTCGCTCGTGGCTTAAGTTAGTTACCTGGTCGATGAATATGACTG
ATCGAATCGACGGAGGAAGCGGAGCTTTACCAAGACGCTAGCGTATTTTA
TTAAGCCTGGTTCTGCAGTGCTTGGCAGCTTGACATACGGTAGCTGGAAG
GACGTATTTGATGCTATATAAGATCGCCGGTACTTTCAACATGCCCACTT
CATACCATTAGTGGATGTGGGAAAGAAAGGCGCATATTTATTGGTCCATG
ATGACCTGGCAAGGCATCACTCGTTCGGAACTACCTTGAGGTTTACTGGC
CTTGTGCCGGCGGACTCTCGGCAGTGAACGCCATCGGTACGCAATTGCGT
GACCCGATAAACTCGGGACTGACCTGATGCCGTATGGCGGTTTCATGAAT
GGACGCCGGGGTCATGGCACGAATGCGTCCCCGCGTTGTGTTGGCTTGGG
GTCATGGTACTGGTTGTCCCGACATCCATGTACGGTATTTAAGCTACACA
TAATACATGCGAGTTCGCCTTCAAAAATAGTAAGAAACGAACTCCGTCCA
GTCACTTGACACTGGACACTCATGTATTTTCATAGCCTACAGATTACAGA
GTGCCCGACGCTTAGTGCCGGGAAGTAATTAGAGTCGCAGCAGCGCGCGA
CTCAAAGCGCAGTTGGTAGAGCTAACCGATGTCAAGCGCACAATGCCGAC
CTGTTCATTGAGGTCGATCGGCGCAGACGCAATGCATGGGGCAGCTTCCG
GAAGTACACCCTCAAGCTGTACGATCGACCAAGCGCTCCCCGCGAGCTCA
AAATCCGGATGCTCAGAGCGGAGATACTCGAGGCCATGCTGTGCGGCTGC
TTCACGTGGAGTCCGCACGCGTGCCACTACGACACGCTGCGCCGATCCCA
CCACAGCTTCCTGACTCGCTGCATCGGTCGTCGAAAGAACAGTTACGCCG
ACCACTTGATTTCCTATCTGGATACGTTTATGAAGACGGGAAGAGAGAGC
ATCGAGGCGGCCTCGACGCAGGAGGCGGATCTTGTTCGCGGATTTGTGGC
GCGCATGAAGGGTTCGAGAGTGCCGAAGTTCGTGATGTTTGGAGAATTGG
TGGGGGGGCAGGAAAAGGAGTGGATGGGGTGTTTCCTGGACGACCTCAGA
GCTTTCGGCTTTAGCACCGCCCAGTGGACGACTGCAGACCAGGACGAAGA
GGAATGGCGCAGGACGGCGGGACAAGGGGCGGAACGTTTTATGGCGAAAT
GGATCGCTGAAGAGAAAGCCAGGGCTGGACTACGCCATGCAGTGGTATGC
GGAAGGACCTTGGAGAGAAAGGCTCAAAGCAATCGGGCTTTTGCTGGTTC
GTTCGTCCTTTTTGACCTGCCACAAGTGGCGCGAACTTGTATCTTCCGAG
CGTTTGGTTTGCTCATGTCATGTCACCTTTCTCTGGTGTTACGTTTGTTT
TTGTTTTGTTTCGTTTTAGTCTTTTTGCTTTCACTGAAGCCGCGGCCCTT
CGTTCAATCGTTCTTCGTTCTTCGATATGCATGCATGATGCACCCCGACA
GCCACACGCAGTTACCTAGCAACTGTCTGCGCCCTTTTTTGTTTTTGTTT
CTTCCTTGTTTTTAAAGAAAAACTCCTTGTTTTGTTTCTTTGGAGATGTC
CCTTTTTCCTAGTAGTTTTGTACCATTACCGTTTTCTCTTTGTGTAAAGA
GTACGTCGTACGTTTTCCCCTTCCGGATGATGTTTTTCTATCTTGTCACC
ACGGGCTGGATTTTTTATTTCAGTTTATGTGATGATTCAATCCAATCAAT
TAATCGAAGAACAAGGACGTTGTGGGACTGACTGCTACATACGAGGAGCA
TATCCACAAATAAAAACTCACGATCTAGCTCCTCCAATCAACGTAAAAGT
CGTCGGCGAAAATACGGGGCGGACCACCGTTCTGTCCCAAATAAAATTCA
GCTGAAAACCCTCAAAACGCTCTGGAAATAGAGCTATATCAGTAACTCTA
GCCCTTCGAACCTCCACGCCTAAAGTACCTTCGTCACACATAGAAAATCT
CAATAGCTATGAAAATCCGGTGCATCTCGTGAAGATTTCTCATAATTACG
TCCGAAAGCCACCCTGCTGAAATGAATCGAGCTCACAGAAGTTCTTCGTC
TGCCCATTCACCTCTTTTGCGACTTTCAGTGGAACCAAACTCGATACGGA
CGCTAGGAACGGGATCAAGGAAGCGCTAGTCCTCCTTCAAGGGGAAGAAG
AAAAGCTTGTCAAAGCTGGTGAAGCTGGTGAGGTTGTTTCACATGCGGTA
CACCTACGACGTATTTTAGTACCGTTTCATTTCGGACTCTTTTCTGAGTC
TCTCCGTTGCGAGGCAGGAGAGATACGTCAAGAAGAAAAGGCGGTACAAT
TATCCTTTCGATTATCGTGCAGCAGTTTTGAGGTGCGATGTCTCTGAAGA
CGCTACAAAGCTCTCCCCCGAGTGCGGGATTCTGATACTGCCTGCCCATA
AACGCTGGGATGAAGACGCAGTTTGATGATTTTATCCTGGCACATGGGCG
CCACATAATCACCAACTACATCCTGTACCATGCAAGGCTATGGCATTACA
GTGGAGCAGAAATAGCATGTGTTCGCTTTCACGTGGACAGTACTATTAAT
ATATACAACTGACAAGGTTCGTATGCCACTGCCGTCTACGCCTGTCCTTT
GCCTGCAAAGTAAATGCGCATCAATGTCTACATGCGGACGTGGAAGCTCT
CCGACGACAGGTCAGGTCGGAAGAGAGACGCGTTCAGGATTGCGCCCGAC
ATCTCACAGAGGCGGACTCAGTATTACGAGGGCCACTGCAGGACGCCAAG
CGCATCCTGGAAGCTGGGCGACAGGCGGAAGCAGGCGAGGATTTCGGTCT
CTACTTTGTTCGTCGTTGAAGTCAGTATGCTCGCGGGATTGAAGGCATAC
AGCTTCTTCCTAAGCCACCTTCAGCGACGGTTGTGGGTTCTCATGTGACG
TTCGTACAGCGTCGAGTATCCTTGCAAATCCTCGGCCCGTGTTCTTCAGA
CCCTTAAACCACGAGCATGAAGACTTGACAAGTCAAAATCACAAACGTAC
GAGTTTTTTCAATGCCTCCCTCCCCCCTGATTGTTTTGAAATACTAATCG
CTTTCCCGAATAGCCGAGATCAGGGTAAGGGATGTTGTGGACTATGCCCA
GCGCATCAGCGGGATCACCTCTGCTCCTTCCTATTGGAAACCCGGGATGG
CGATGGTAGGATTCGCGCCGCCCGCGCCAAGGCCTGAGATGATGCGCGCG
GGAGCTCTAAGCGCGTTCGCGGATGCCCTAGGTGCGTCGTGAAGGCCACT
CTGGGCGTCGAGTCAAACAGTTGATGGGTGGCGGGACAGTAACATTTGAG
GGACAGGATGTGTGTATCTAGAAGCCATATACTTCTTCGCAGCACTTGAG
CTGTGCCGGTATGACTGCCTCGCACGCTTTGCGCGTTTTTTTCTTCGTTT
TTTTTCTTGTCCCACGAGTTCAAGACGCAATCTTTAGTTTTCATGTGGTC
CGCCTGCCTGGAACAGGTTTCTCGGTGTCACTTTTCCCTGCCGGCAATCG
CCTGATGTTGCATTGCTGTTTTTGTCCCCACGCGGAACAACAGGGAACTC
TCTCCCGGCCGATGATTTGCTGAGACTTGTGCAAGATCTGGACAGGCCTC
CACGGAAGACGTCACAAAGAACTGCGGGGCAATCGGTCAACGGCGTCGAG
GGCACCGACGATCTCAGCTCACAAGATAGTGAGAAAGATGAAAAGGGAGG
GCGGAGTAGTTTTAGTAGTACTGGTGAGAGGAAAAAGGGTGGTGAAAGGC
GAACAGCGAAGGGCGACGAGAAGAGCGTTCCCACGAAATTGAAACGAGAA
ACGTCGGTTAACTTTGGACGGGAGGATCCGCCGAAGCGACCGAAGATTTC
GCTTGACCTCGACGACTTGGACAGTGACAGCGAGGAAGACGACGAGTAAA
TGAAATGAAGTTGTCGAAGTTCCTTAGTAAATGTGTAATTGATTGGGAGG
CAGGCAGCGGTGTGATAAGATGAGTTTGATGAAAGAACCACACAAAGCTA
TGGAATATGAGCACGTAATAATAAAATGATTGGACGCGTGCAGGTAAATA
TATAAAGTACTTCGTAGGTTTTAGTTGCCCAGGTTTGTGCCATCTATCC
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Coding sequence (CDS) from alignment at F-serratus_M_contig943:265378..275526-

>mRNA_F-serratus_M_contig943.20799.1 ID=mRNA_F-serratus_M_contig943.20799.1|Name=mRNA_F-serratus_M_contig943.20799.1|organism=Fucus serratus male|type=CDS|length=1770bp|location=Sequence derived from alignment at F-serratus_M_contig943:265378..275526- (Fucus serratus male)
ATGGCGGAAGTAGCGCGCACGCTTTCCCTCCTCAGGAAAGAGATATTGAT
CACGGATGAGGTGCTGGGCGCGCTCAGCAGGTGTCAAAGATGGCGGAAGT
AGCGCGCACGCTTTCCCTCCTCAGGAAAGAGATATTGATCACGGATGAGG
TGCTGGGCGCGCTCAGCAGGTGTCAAAGTGGAACCAAACTCGATACGGAC
GCTAGGAACGGGATCAAGGAAGCGCTAGTCCTCCTTCAAGGGGAAGAAGA
AAAGCTTGTCAAAGCTGGTGAAGCTGTGGAACCAAACTCGATACGGACGC
TAGGAACGGGATCAAGGAAGCGCTAGTCCTCCTTCAAGGGGAAGAAGAAA
AGCTTGTCAAAGCTGGTGAAGCTGTAAATGCGCATCAATGTCTACATGCG
GACGTGGAAGCTCTCCGACGACAGGTCAGGTCGGAAGAGAGACGCGTTCA
GGATTGCGCCCGACATCTCACAGAGGCGGACTCAGTATTACGAGGGCCAC
TGCAGGACGCCAAGCGCATCCTGGAAGCTGGGCGACAGGCGGAAGCAGTA
AATGCGCATCAATGTCTACATGCGGACGTGGAAGCTCTCCGACGACAGGT
CAGGTCGGAAGAGAGACGCGTTCAGGATTGCGCCCGACATCTCACAGAGG
CGGACTCAGTATTACGAGGGCCACTGCAGGACGCCAAGCGCATCCTGGAA
GCTGGGCGACAGGCGGAAGCAGCCGAGATCAGGGTAAGGGATGTTGTGGA
CTATGCCCAGCGCATCAGCGGGATCACCTCTGCTCCTTCCTATTGGAAAC
CCGGGATGGCGATGGTAGGATTCGCGCCGCCCGCGCCAAGGCCTGAGATG
ATGCGCGCGGGAGCTCTAAGCGCGTTCGCGGATGCCCTAGCCGAGATCAG
GGTAAGGGATGTTGTGGACTATGCCCAGCGCATCAGCGGGATCACCTCTG
CTCCTTCCTATTGGAAACCCGGGATGGCGATGGTAGGATTCGCGCCGCCC
GCGCCAAGGCCTGAGATGATGCGCGCGGGAGCTCTAAGCGCGTTCGCGGA
TGCCCTAGGGAACTCTCTCCCGGCCGATGATTTGCTGAGACTTGTGCAAG
ATCTGGACAGGCCTCCACGGAAGACGTCACAAAGAACTGCGGGGCAATCG
GTCAACGGCGTCGAGGGCACCGACGATCTCAGCTCACAAGATAGTGAGAA
AGATGAAAAGGGAGGGCGGAGTAGTTTTAGTAGTACTGGTGAGAGGAAAA
AGGGTGGTGAAAGGCGAACAGCGAAGGGCGACGAGAAGAGCGTTCCCACG
AAATTGAAACGAGAAACGTCGGTTAACTTTGGACGGGAGGATCCGCCGAA
GCGACCGAAGATTTCGCTTGACCTCGACGACTTGGACAGTGACAGCGAGG
AAGACGACGAGTAAGGAACTCTCTCCCGGCCGATGATTTGCTGAGACTTG
TGCAAGATCTGGACAGGCCTCCACGGAAGACGTCACAAAGAACTGCGGGG
CAATCGGTCAACGGCGTCGAGGGCACCGACGATCTCAGCTCACAAGATAG
TGAGAAAGATGAAAAGGGAGGGCGGAGTAGTTTTAGTAGTACTGGTGAGA
GGAAAAAGGGTGGTGAAAGGCGAACAGCGAAGGGCGACGAGAAGAGCGTT
CCCACGAAATTGAAACGAGAAACGTCGGTTAACTTTGGACGGGAGGATCC
GCCGAAGCGACCGAAGATTTCGCTTGACCTCGACGACTTGGACAGTGACA
GCGAGGAAGACGACGAGTAA
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