mRNA_F-serratus_M_contig93.20683.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_F-serratus_M_contig93.20683.1
Unique Name	mRNA_F-serratus_M_contig93.20683.1
Type	mRNA
Organism	Fucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))

Homology

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BLAST of mRNA_F-serratus_M_contig93.20683.1 vs. uniprot
Match: D8LH19_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LH19_ECTSI)

HSP 1 Score: 144 bits (364), Expect = 5.820e-33
Identity = 74/135 (54.81%), Postives = 93/135 (68.89%), Query Frame = 3

Query:  168 SGFEQRASILQGSEELIVKLVCGGTTPEQWAEWLRAPLEHAAAQANYELVEKLLKAGANGKAGSRGCLGRTLLDAAAEGGSEKVVSALLDAGSKPDINLKTKGTHCTPLHRAARGGHADAARILLMAGASVDSLD 572
            + F++R + L G+EE + KLV    TP QWAEWLRAPLEHA A+ N  L   LL+AGA+G AG +GC GR+LLD A +GG+ K VSALL+AGS  D+N  T     +PLHRA  GGH   AR+L++AGA V  LD
Sbjct:    2 ANFDERTAALGGTEEQLFKLVSRHATPAQWAEWLRAPLEHAVAEGNQHLASTLLRAGADGGAGWKGCDGRSLLDVAVQGGNSKTVSALLEAGSLGDVNAVTGSDRRSPLHRAIAGGHTAVARVLMLAGAGVSLLD 136

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BLAST of mRNA_F-serratus_M_contig93.20683.1 vs. uniprot
Match: D8LHQ7_ECTSI (F-box domain and ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHQ7_ECTSI)

HSP 1 Score: 137 bits (346), Expect = 5.460e-32
Identity = 76/134 (56.72%), Postives = 95/134 (70.90%), Query Frame = 3

Query:  171 GFEQRASILQGSEELIVKLVCGGTTPEQWAEWLRAPLEHAAAQANYELVEKLLKAGANGKAGSRGCLGRTLLDAAAEGGSEKVVSALLDAGSKPDINLKTKGTHCTPLHRAARGGHADAARILLMAGASVDSLD 572
            G+E+R+SILQ   +   KLV    TP+QWAEWLRAPLEHAAA  N +LV+KLL AGANG AG RGC G+TLL AAAEGG+ +V++ L +AG+  D+  K   T  TPL  A  GG   AA+ L+MAGA+V+ LD
Sbjct:   45 GYEERSSILQDLGDTTFKLVRDRATPDQWAEWLRAPLEHAAATGNRDLVDKLLGAGANGGAGWRGCHGKTLLHAAAEGGNVQVITRLRNAGAGEDMKAKALDTGHTPLDLAVIGGKEAAAKALIMAGANVNMLD 178

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BLAST of mRNA_F-serratus_M_contig93.20683.1 vs. uniprot
Match: D7G2A3_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2A3_ECTSI)

HSP 1 Score: 140 bits (354), Expect = 1.030e-31
Identity = 78/134 (58.21%), Postives = 95/134 (70.90%), Query Frame = 3

Query:  171 GFEQRASILQGSEELIVKLVCGGTTPEQWAEWLRAPLEHAAAQANYELVEKLLKAGANGKAGSRGCLGRTLLDAAAEGGSEKVVSALLDAGSKPDINLKTKGTHCTPLHRAARGGHADAARILLMAGASVDSLD 572
            G+E+RASILQ   + I KLVC   TPEQWAEWLRAPLEHAA   N +LV+KLL AGAN  AG RGC G+TLL AAAEGG+  V+++L  AG+  D+  K+  T  TPL  A  GG   AA+ L+MAGA V++LD
Sbjct:    3 GYEERASILQDLGDTIFKLVCDRATPEQWAEWLRAPLEHAAGTGNRDLVDKLLGAGANVGAGWRGCHGKTLLHAAAEGGNVHVITSLRRAGAGRDMKAKSLDTGHTPLDLAVIGGKEAAAKALIMAGADVNTLD 136

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BLAST of mRNA_F-serratus_M_contig93.20683.1 vs. uniprot
Match: D7FQP1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQP1_ECTSI)

HSP 1 Score: 135 bits (341), Expect = 1.390e-30
Identity = 77/138 (55.80%), Postives = 94/138 (68.12%), Query Frame = 3

Query:  162 PASGFEQRASILQGSEELIVKLVCGGTTPEQWAEWLRAPLEHAAAQANYELVEKLLKAGANGKAGSRGCLGRTLLDAAAEGGSEKVVSALLDAGSKPDINLKTKG-THCTPLHRAARGGHADAARILLMAGASVDSLD 572
            P    E RA  L  +  +I KL+C   T EQWAEWLRAPLEHAA  AN +LVEKLLKAGA+G AG RGC  +TLL AAAEGG+E+VV+AL+ AG+  D+  K  G    TPLH A   G   AAR+L++AGA V++ D
Sbjct:    4 PREDAEDRAKTLGDAAGIIFKLMCDRATSEQWAEWLRAPLEHAAGTANQDLVEKLLKAGADGSAGWRGCDDKTLLHAAAEGGNEEVVTALVRAGAGEDMEAKVLGIVGGTPLHVAVATGKDAAARVLMLAGADVNAAD 141

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BLAST of mRNA_F-serratus_M_contig93.20683.1 vs. uniprot
Match: A0A6H5JXY4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXY4_9PHAE)

HSP 1 Score: 135 bits (341), Expect = 3.330e-30
Identity = 77/134 (57.46%), Postives = 94/134 (70.15%), Query Frame = 3

Query:  177 EQRASILQGSEELIVKLVCGGTTPEQWAEWLRAPLEHAAAQANYELVEKLLKAGANGKAGSRGCLGRTLLDAAAEGGSEK-VVSALLDAGSKPDINLKTKG-THCTPLHRAARGGHADAARILLMAGASVDSLD 572
            E RA IL  + ++I +L+C   T EQWAEWLRAPLEHAA  AN +LVEKLLKAGANG AG RGC   TLL AAAEGG+E+ VV+AL+ AG++ DI  K  G    TPLH A   G   AAR +++AGA V++ D
Sbjct:   11 EDRAKILGDAADMIFELMCDRATSEQWAEWLRAPLEHAAGTANQDLVEKLLKAGANGSAGRRGCDDNTLLHAAAEGGNEEEVVTALIKAGAEEDIEAKVVGMVRGTPLHVAVATGKEAAARAMMLAGADVNAAD 144

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BLAST of mRNA_F-serratus_M_contig93.20683.1 vs. uniprot
Match: D7FQP2_ECTSI (Pc16g06120 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQP2_ECTSI)

HSP 1 Score: 132 bits (331), Expect = 5.000e-30
Identity = 73/137 (53.28%), Postives = 89/137 (64.96%), Query Frame = 3

Query:  162 PASGFEQRASILQGSEELIVKLVCGGTTPEQWAEWLRAPLEHAAAQANYELVEKLLKAGANGKAGSRGCLGRTLLDAAAEGGSEKVVSALLDAGSKPDINLKTKGTHCTPLHRAARGGHADAARILLMAGASVDSLD 572
            P    E R  IL  + ++I KL+C   T EQW EWLRAPLEHAA  AN +LVEKLLKAGA+G AG RGC   TLL AA       VV+AL+ AG+  D+  KT GT  TPLH A   G   AAR+L++AGA V+++D
Sbjct:    4 PREDAEDRVKILGDAADMIFKLMCDRATSEQWTEWLRAPLEHAAGTANRDLVEKLLKAGADGSAGWRGCDDNTLLHAAXXXXXXXVVTALIRAGAGEDMEAKTPGTGGTPLHVAVMRGQEAAARVLVLAGADVNAVD 140

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BLAST of mRNA_F-serratus_M_contig93.20683.1 vs. uniprot
Match: D7FM65_ECTSI (Similar to ankyrin 2,3/unc44, partial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM65_ECTSI)

HSP 1 Score: 131 bits (329), Expect = 2.820e-29
Identity = 71/135 (52.59%), Postives = 88/135 (65.19%), Query Frame = 3

Query:  168 SGFEQRASILQGSEELIVKLVCGGTTPEQWAEWLRAPLEHAAAQANYELVEKLLKAGANGKAGSRGCLGRTLLDAAAEGGSEKVVSALLDAGSKPDINLKTKGTHCTPLHRAARGGHADAARILLMAGASVDSLD 572
            S  + R S L G+ ++I+ LVC   TP QW +WLR PLEHAA   N  LVEKLLK GAN  AG RGC GRTL+ A AEGGSE+V+S L  AG+   IN +   +  TPLH A  GG   A ++L++AGA V+ LD
Sbjct:    2 STHQDRKSTLHGTGDMILDLVCDLATPRQWTKWLRVPLEHAAGTGNAALVEKLLKVGANASAGWRGCDGRTLMHAGAEGGSEQVISMLTRAGAGKYINDQAPLSGLTPLHLAVSGGKLAATKVLMLAGADVNRLD 136

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BLAST of mRNA_F-serratus_M_contig93.20683.1 vs. uniprot
Match: D7FXA8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXA8_ECTSI)

HSP 1 Score: 133 bits (335), Expect = 3.420e-29
Identity = 71/124 (57.26%), Postives = 88/124 (70.97%), Query Frame = 3

Query:  201 GSEELIVKLVCGGTTPEQWAEWLRAPLEHAAAQANYELVEKLLKAGANGKAGSRGCLGRTLLDAAAEGGSEKVVSALLDAGSKPDINLKTKGTHCTPLHRAARGGHADAARILLMAGASVDSLD 572
            G E  I K+V  G TPEQWA WLRAPLEHAAA  N  LV++LLKAG +GKAG RGC GR+LLDAAA GG+  V+SALL AG  PD+N+    T  + L+++  G H  AAR L++AGA V+ +D
Sbjct:   10 GEEVEIFKIVSEGATPEQWARWLRAPLEHAAASGNLNLVDRLLKAGVDGKAGWRGCRGRSLLDAAALGGNAGVMSALLQAGCGPDVNVVASSTGRSALYQSVLGKHEAAARKLILAGADVNFVD 133

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BLAST of mRNA_F-serratus_M_contig93.20683.1 vs. uniprot
Match: A0A6H5K1F4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1F4_9PHAE)

HSP 1 Score: 133 bits (334), Expect = 8.100e-29
Identity = 72/132 (54.55%), Postives = 95/132 (71.97%), Query Frame = 3

Query:  183 RASILQGSEELIVKLVCGGTTPEQWAEWLRAPLEHAAAQANYELVEKLLKAGANGKAGSRGCLGRTLLDAAAEGGSEKVVSALLDAGSKPDINLKTKGTHCTPLHRAARGGHADAARILLMAGASVDSLDIG 578
            + ++L+G+E  I KL+  G TPEQWAEWLRAPLEHAAA+ N  LVE+LL AGANG AG RGC GRT+LDAAA GG+  VV+ LL +G   D+N+ +  +  + LH A+  GH  AA+ L++AGA V+ +D G
Sbjct:    6 KRALLEGAELEIFKLLYFGATPEQWAEWLRAPLEHAAARGNLGLVERLLNAGANGGAGWRGCRGRTMLDAAALGGNPDVVATLLASGCASDVNVVSLSSRRSALHVASVCGHEAAAKKLIIAGADVNRVDPG 137

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BLAST of mRNA_F-serratus_M_contig93.20683.1 vs. uniprot
Match: D8LRZ8_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRZ8_ECTSI)

HSP 1 Score: 130 bits (326), Expect = 2.680e-28
Identity = 71/127 (55.91%), Postives = 88/127 (69.29%), Query Frame = 3

Query:  192 ILQGSEELIVKLVCGGTTPEQWAEWLRAPLEHAAAQANYELVEKLLKAGANGKAGSRGCLGRTLLDAAAEGGSEKVVSALLDAGSKPDINLKTKGTHCTPLHRAARGGHADAARILLMAGASVDSLD 572
            + QG    I KLV    TP+QW EWLR PLEHAAA+ N  LV  LL+AGA+G AG +GC GRTL+DAAA GGSE VVSALL AG++PD+N+ +  +  + L+ A   GH DAAR L+ AGA V+  D
Sbjct:    9 LFQGMGSEIWKLVSHSATPQQWKEWLRVPLEHAAARGNLNLVNSLLEAGADGSAGWKGCRGRTLIDAAALGGSEPVVSALLRAGAQPDVNVVSVSSKRSSLYTATVCGHKDAARRLITAGADVNFED 135

The following BLAST results are available for this feature:

BLAST of mRNA_F-serratus_M_contig93.20683.1 vs. uniprot

BLAST of mRNA_F-serratus_M_contig93.20683.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LH19_ECTSI	5.820e-33	54.81	Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=28...	[more]
D8LHQ7_ECTSI	5.460e-32	56.72	F-box domain and ankyrin repeat protein n=1 Tax=Ec...	[more]
D7G2A3_ECTSI	1.030e-31	58.21	Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus si...	[more]
D7FQP1_ECTSI	1.390e-30	55.80	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5JXY4_9PHAE	3.330e-30	57.46	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7FQP2_ECTSI	5.000e-30	53.28	Pc16g06120 n=1 Tax=Ectocarpus siliculosus TaxID=28...	[more]
D7FM65_ECTSI	2.820e-29	52.59	Similar to ankyrin 2,3/unc44, partial n=1 Tax=Ecto...	[more]
D7FXA8_ECTSI	3.420e-29	57.26	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5K1F4_9PHAE	8.100e-29	54.55	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D8LRZ8_ECTSI	2.680e-28	55.91	Ankyrin repeat protein n=1 Tax=Ectocarpus siliculo...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
F-serratus_M_contig93	contig	F-serratus_M_contig93:391506..395995 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90	2022-09-19
OGS1.0 of Fucus serratus male	2021-02-24

Properties


Property Name	Value
Taxonomic scope	Eukaryota
Seed ortholog score	145.6
Seed ortholog evalue	6.1e-32
Seed eggNOG ortholog	2880.D8LH19
KEGG ko	ko:K21440
Hectar predicted targeting category	other localisation
GOs	GO:0001508,GO:0002027,GO:0002262,GO:0002376,GO:0002520,GO:0003008,GO:0003012,GO:0003013,GO:0003015,GO:0003205,GO:0003230,GO:0003279,GO:0003283,GO:0003674,GO:0005198,GO:0005200,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005783,GO:0005829,GO:0005856,GO:0005886,GO:0005911,GO:0005938,GO:0006725,GO:0006778,GO:0006779,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0006816,GO:0006873,GO:0006874,GO:0006875,GO:0006887,GO:0006888,GO:0006928,GO:0006936,GO:0006937,GO:0006941,GO:0006942,GO:0006996,GO:0007009,GO:0007010,GO:0007154,GO:0007163,GO:0007165,GO:0007267,GO:0007275,GO:0007507,GO:0008015,GO:0008016,GO:0008092,GO:0008093,GO:0008104,GO:0008150,GO:0008152,GO:0009058,GO:0009893,GO:0009987,GO:0010256,GO:0010468,GO:0010522,GO:0010604,GO:0010628,GO:0010638,GO:0010646,GO:0010880,GO:0010881,GO:0010882,GO:0010959,GO:0012505,GO:0014704,GO:0014731,GO:0015672,GO:0016020,GO:0016043,GO:0016192,GO:0016323,GO:0016528,GO:0016529,GO:0018130,GO:0019222,GO:0019438,GO:0019722,GO:0019725,GO:0019899,GO:0019900,GO:0019901,GO:0019932,GO:0022898,GO:0023051,GO:0023052,GO:0030001,GO:0030003,GO:0030011,GO:0030016,GO:0030017,GO:0030018,GO:0030029,GO:0030048,GO:0030054,GO:0030097,GO:0030099,GO:0030154,GO:0030218,GO:0030315,GO:0030424,GO:0030507,GO:0030673,GO:0030674,GO:0030863,GO:0031252,GO:0031253,GO:0031256,GO:0031430,GO:0031647,GO:0031672,GO:0031674,GO:0032409,GO:0032411,GO:0032412,GO:0032414,GO:0032501,GO:0032502,GO:0032589,GO:0032879,GO:0032940,GO:0032970,GO:0033013,GO:0033014,GO:0033036,GO:0033043,GO:0033267,GO:0033292,GO:0033365,GO:0034101,GO:0034394,GO:0034613,GO:0034641,GO:0034762,GO:0034764,GO:0034765,GO:0034767,GO:0035088,GO:0035090,GO:0035556,GO:0035637,GO:0036309,GO:0036371,GO:0042383,GO:0042391,GO:0042592,GO:0042692,GO:0042995,GO:0043005,GO:0043034,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043266,GO:0043268,GO:0043269,GO:0043270,GO:0043292,GO:0044057,GO:0044093,GO:0044237,GO:0044249,GO:0044271,GO:0044291,GO:0044304,GO:0044325,GO:0044422,GO:0044424,GO:0044425,GO:0044444,GO:0044448,GO:0044449,GO:0044456,GO:0044459,GO:0044463,GO:0044464,GO:0045197,GO:0045199,GO:0045202,GO:0045211,GO:0046483,GO:0046903,GO:0046907,GO:0048193,GO:0048468,GO:0048513,GO:0048518,GO:0048522,GO:0048534,GO:0048731,GO:0048821,GO:0048856,GO:0048869,GO:0048872,GO:0048878,GO:0050789,GO:0050794,GO:0050801,GO:0050821,GO:0050896,GO:0051049,GO:0051050,GO:0051117,GO:0051128,GO:0051130,GO:0051179,GO:0051186,GO:0051188,GO:0051234,GO:0051239,GO:0051270,GO:0051279,GO:0051282,GO:0051641,GO:0051649,GO:0051716,GO:0051899,GO:0051924,GO:0051928,GO:0055001,GO:0055065,GO:0055072,GO:0055074,GO:0055076,GO:0055080,GO:0055082,GO:0055117,GO:0060047,GO:0060048,GO:0060090,GO:0060255,GO:0060306,GO:0060307,GO:0060341,GO:0061024,GO:0061061,GO:0061245,GO:0061337,GO:0061515,GO:0065007,GO:0065008,GO:0065009,GO:0070252,GO:0070296,GO:0070727,GO:0070838,GO:0070972,GO:0071704,GO:0071840,GO:0071944,GO:0072359,GO:0072503,GO:0072507,GO:0072511,GO:0072657,GO:0072659,GO:0086001,GO:0086002,GO:0086003,GO:0086004,GO:0086005,GO:0086010,GO:0086012,GO:0086014,GO:0086015,GO:0086018,GO:0086019,GO:0086026,GO:0086046,GO:0086065,GO:0086066,GO:0086070,GO:0086091,GO:0090257,GO:0097060,GO:0097458,GO:0098590,GO:0098771,GO:0098794,GO:0098900,GO:0098901,GO:0098907,GO:0098910,GO:0099080,GO:0099081,GO:0099512,GO:0099568,GO:0099623,GO:0120025,GO:0120038,GO:1901016,GO:1901018,GO:1901019,GO:1901021,GO:1901360,GO:1901362,GO:1901379,GO:1901381,GO:1901564,GO:1901566,GO:1901576,GO:1903115,GO:1903169,GO:1903522,GO:1903779,GO:1904062,GO:1904064,GO:1904427,GO:1990778,GO:2001257,GO:2001259
EggNOG free text desc.	response to abiotic stimulus
EggNOG OGs	COG0666@1,KOG4177@2759
COG Functional cat.	G
Best tax level	Eukaryota
Best eggNOG OG	NA\|NA\|NA
BRITE	ko00000,ko04131
Exons	2
Model size	2872
Cds size	1455
Stop	1
Start	1

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_F-serratus_M_contig93.20683.1	prot_F-serratus_M_contig93.20683.1	Fucus serratus male	polypeptide	F-serratus_M_contig93 392774..395846 -

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622932681.316101-UTR-F-serratus_M_contig93:391505..392773	1622932681.316101-UTR-F-serratus_M_contig93:391505..392773	Fucus serratus male	UTR	F-serratus_M_contig93 391506..392773 -
1690964419.7456264-UTR-F-serratus_M_contig93:391505..392773	1690964419.7456264-UTR-F-serratus_M_contig93:391505..392773	Fucus serratus male	UTR	F-serratus_M_contig93 391506..392773 -
1622932681.3672888-UTR-F-serratus_M_contig93:395846..395995	1622932681.3672888-UTR-F-serratus_M_contig93:395846..395995	Fucus serratus male	UTR	F-serratus_M_contig93 395847..395995 -
1690964419.7837324-UTR-F-serratus_M_contig93:395846..395995	1690964419.7837324-UTR-F-serratus_M_contig93:395846..395995	Fucus serratus male	UTR	F-serratus_M_contig93 395847..395995 -

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622932681.329364-CDS-F-serratus_M_contig93:392773..393961	1622932681.329364-CDS-F-serratus_M_contig93:392773..393961	Fucus serratus male	CDS	F-serratus_M_contig93 392774..393961 -
1690964419.7617886-CDS-F-serratus_M_contig93:392773..393961	1690964419.7617886-CDS-F-serratus_M_contig93:392773..393961	Fucus serratus male	CDS	F-serratus_M_contig93 392774..393961 -
1622932681.3499212-CDS-F-serratus_M_contig93:395579..395846	1622932681.3499212-CDS-F-serratus_M_contig93:395579..395846	Fucus serratus male	CDS	F-serratus_M_contig93 395580..395846 -
1690964419.7729585-CDS-F-serratus_M_contig93:395579..395846	1690964419.7729585-CDS-F-serratus_M_contig93:395579..395846	Fucus serratus male	CDS	F-serratus_M_contig93 395580..395846 -

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at F-serratus_M_contig93:391506..395995-
coding sequence from alignment at F-serratus_M_contig93:391506..395995-

protein sequence of mRNA_F-serratus_M_contig93.20683.1

>prot_F-serratus_M_contig93.20683.1 ID=prot_F-serratus_M_contig93.20683.1|Name=mRNA_F-serratus_M_contig93.20683.1|organism=Fucus serratus male|type=polypeptide|length=485bp
MNRFPASGFEQRASILQGSEELIVKLVCGGTTPEQWAEWLRAPLEHAAAQ
ANYELVEKLLKAGANGKAGSRGCLGRTLLDAAAEGGSEKVVSALLDAGSK
PDINLKTKGTHCTPLHRAARGGHADAARILLMAGASVDSLDIGQCTPLHL
AFVKDGDQLACDLLLSGANPGAQDVYGFCPIHYAASRGRDRSVQLMLHKG
VDVNIRNTRGLTPLHAAAIAGRVDAATILLDAGADSGASDALGNTPLHHA
AEHNMYDIVQALVNAGANIGVRASDGWTPLHRAAFHSSPAAMLALLRQGA
DVKMATNAGWSALHVACWRGNPDAAELLLRWGADEQSSVPTGKTARDLIP
SVKDASEKDLPALEQLARLLAHAPRDRAWRRRGFLVLCRDHLGVDRARRG
AGRNDAGGVATRGHSTGGARKKQAKREVMFVCGTSQAGGGSPGSASSRSA
ARGEKVADSGSVDVVAWAVGLKQTILFRKIIGYL*

mRNA from alignment at F-serratus_M_contig93:391506..395995-

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_F-serratus_M_contig93.20683.1 ID=mRNA_F-serratus_M_contig93.20683.1|Name=mRNA_F-serratus_M_contig93.20683.1|organism=Fucus serratus male|type=mRNA|length=4490bp|location=Sequence derived from alignment at F-serratus_M_contig93:391506..395995- (Fucus serratus male)
CGCTTGTTTATCTTACCAGTATATTGTAAAAATACCAATACAATGTTTTG
CCGGCCCTCGTCGTCGCGGTAAGGCTCAAGGTACTCGATCTAATCGTGCT
TGTGGGCTGCTGGAGTGAGGACACGGTGCACCTTGAGCTCTTCCTTGCGA
TGAATCGTTTCCCAGCATCAGGCTTTGAACAACGGGCCAGCATTCTGCAA
GGATCGGAGGAGCTGATCGTGAAACTCGTGTGTGGGGGAACCACGCCGGA
GCAGTGGGCGGAATGGCTTCGTGCGCCGCTGGAGCATGCTGCGGCACAGG
CAAACTATGAGCTAGTGGAGAAGCTCCTGAAGGCTGGCGCGAATGGAAAA
GCAGGATCGCGCGGGTGCCTTGGGCGAACGCTTCTAGATGCGGCAGCCGA
AGGAGGAAGCGAGAAGGTGTGAATAGCCTCGGCGAACCATCTAGCACAGC
TACCTGGGTACTATGATACTGCTTGCTCTATATTCTGACATCCCCGGATC
TTGGCATGATACAGACAATTATTGATACGGTACTTTCAATATGCCCACAT
CATACCAACAGTGGGTGTGGGAAAGAGAGGGGTACACAAGCCGGTCGCCC
CGGTAGCTCAGTAGGTACCTCGTAACCTTCTGACACGTTGGGACGTGAGT
TCGATCTCGGTAAACGGGATTTTTCTCACAAAAAAACAAAAAAACAAAAT
AAAAATGCCCAACGGGTGGAGAACGATTAATTCGTCAGTACACAAAATTC
GACTTCACGGTCGACGAGGGAAAGTAATGGCTGAATCCTTCTCGCGATAA
AAATTAAGGCACGCCCCGCAGAACAGAAGGAAGGTGGATGAGAAATCCTG
TGTGACCTTCCTCCTGTGTGACCCCGGCTGGTACGTCCAACAAACTTGGT
GTCCAGAATGGATGGGAAGAAAACACACACACACACACACACAAGGAACT
CTGAGCTTAAGTAAGAATTGTACAAGTAGAGAGAGCGTGTCCCCTTTGTC
GCGTCTGATCAGAGGTTTTCGTAATAAGTATCATTGATCCCCCCTCGGGA
GGATCAATGCGAGTGGCATAGAATGACTAGGATGACAGGGCCGGATTGCG
TGGTTATGTGCAATTTAATAAATACACACACACACACAAACACACACACA
CACACACACACATTAAAGTGACCTGCTAAGGCAGCACTCGTTCGGAACTA
CCTTGAGGTTTACTTGCCCTGTGCCGGCGGAGTCTCGGCAATGAACGCCA
TCGGTACGCAATTGCGTGACCCGATTAACTTGGGACTGACCCGATGGCAT
ATGGCGGTTTGAAATAAATATATGCGCCGCCACGGAACTCGGGAGGAATC
CCGTAAGCACGAGATTCAGCCTGAGTATGGAGATGAGCAGCCTGACGCGG
GACGGGACTGCCGAAACCGTCTCGCGAGACCAAATTTTCAGGCACGAACG
CGGACAGGAAAACATTAATTTTCCCTGTTCAGCTGACCGCGAGCAGGATT
GGCAACCTTACACGGTTGATCCAAACTCTTGCTATTTGTGTGACCATACA
TCGTTGATCGATGGTGTTTCATTGCTTTGAAATCGGGACTTGAATACGGT
TTCACGAGATCACCGATCAACCATGTTCTAATGCCATCGGTTACCGGTCG
TCACGCGTGCTCATCACGCCTTAGCACGCGAGGAATTTTACAGCCGTTGC
CGTAGATGTCGTGTTCACGAGTTGTTCAAGGGCCATATTTCCTCCATTCG
GGGTTGAAAAGAAAAATCGAAACCCATATATATATACGTGCTGAGGATCC
ACATCCACCTACGGCCAGACGAAAATTGTATGTAATTCCTGAAGCACAGG
AATATTCTGTCTGAACAGTTCCAGGCACTTGAGTCTCACTCACTCGCCTT
TCATATCTTTCTGTTGAGCTTGTGTGTACGGAGTTGTTTTTCGATATGAC
ATGAGCCCTTCCTATTTATAGTGCTATTTACTTGCTAGCCAACCAACCGC
CTGTTTTCCGTTGCACGGCGTCAATCCCCCCAAGGTGGTGTCCGCTCTCC
TGGATGCGGGATCCAAGCCGGACATCAACTTGAAGACCAAGGGCACCCAC
TGCACACCGCTGCATCGCGCCGCTCGTGGAGGACATGCCGACGCGGCCAG
GATACTCTTGATGGCGGGAGCGAGCGTCGACTCCCTGGACATTGGTCAGT
GCACTCCGCTGCACCTTGCTTTCGTGAAAGACGGGGACCAGCTCGCTTGT
GACCTTTTGCTGAGCGGAGCCAATCCTGGCGCTCAAGACGTGTACGGCTT
CTGTCCTATCCACTACGCCGCGTCCCGAGGTCGGGATCGGAGCGTTCAGC
TGATGCTGCACAAAGGTGTGGACGTCAACATCCGGAACACTCGTGGACTG
ACACCCCTCCATGCGGCGGCCATCGCGGGTCGCGTCGATGCGGCAACCAT
CCTTCTGGATGCCGGCGCCGACTCGGGGGCCTCCGATGCGCTGGGGAACA
CTCCTCTGCACCACGCCGCCGAACACAACATGTATGACATAGTTCAAGCG
CTCGTTAATGCAGGGGCGAACATCGGAGTCCGCGCTAGCGACGGGTGGAC
ACCGCTTCATCGCGCGGCCTTCCACAGCAGTCCCGCGGCCATGCTCGCCC
TCCTGCGCCAAGGAGCCGACGTCAAGATGGCGACAAACGCCGGGTGGAGT
GCGTTGCACGTTGCGTGTTGGCGGGGCAACCCCGACGCGGCGGAATTGCT
GCTGCGGTGGGGGGCAGATGAACAGTCCTCGGTCCCTACCGGGAAGACCG
CTCGCGATCTGATACCATCGGTCAAGGATGCTTCAGAGAAAGACCTCCCT
GCTCTAGAGCAGCTGGCCAGGCTGCTGGCGCACGCACCAAGAGATCGGGC
GTGGCGTCGACGGGGTTTTCTTGTGCTGTGCCGGGATCACCTTGGAGTGG
ACAGGGCACGACGAGGAGCCGGGCGCAACGACGCCGGCGGAGTGGCCACG
CGGGGGCACTCAACCGGCGGAGCACGCAAGAAGCAGGCGAAGAGGGAGGT
GATGTTCGTTTGCGGGACATCGCAGGCTGGAGGTGGTTCTCCTGGGTCGG
CGAGCTCGCGCAGCGCGGCGCGCGGGGAAAAGGTCGCCGATTCAGGCTCT
GTCGATGTGGTGGCCTGGGCGGTAGGGCTCAAGCAGACGATTCTTTTCAG
GAAGATTATTGGTTACCTCTAGCAAAGACTGGAAGGATTTTTCAACATGT
CACCTTCATTTCGAGCCTGAAAAGACGTACTGGTACATCATCCAGAGCGC
GGTACACCGCGCCGGGCGTGCGGAGATCGTTTCACCTTCACCTGCACTAC
ACGAGTGAAAAAGCGATACGCGCATCTCGCGCGCTTGCTTGCGGGTTTGT
CCTGAAGTTTTTGTGTGTCGGCAAGCGCTTCGAGGAGCAACACGCCTCCT
TAATAATATTTTCCTCCGCATGACCATCCAGGAAGACAGACCTCCATTCC
CCGGGCTAGTTTAAATAGTCACTTGTTGCGGGACGAGGTTTACAAGTGTG
TTCGGCACAGGAAAGATTCGAACGCTCGAAGGAGTTCCAACATTTATGTA
TTTCGGAAGATGCGGGACGGGGCTCACATAATTTCTCCCCGCGCTCGAGA
GGAACTCTCGGCAATCTTCGGGATCGTTAGCCTGGCGTAAACCAGAGAAG
ACCATGTTTTTTTTTATGGTAGCGGGAGCGTTATTGCTGCCACCTGGTGG
AGGGATAGCGCTCCCGTTTGCATCTTCATGCTTTGGCGCAAAATGTGACT
CGCGTCGAGATGGAGGCGCATTTATAGATTAGAGACCGCAACGGTTTGCG
TAAGGGTTTCTCTTTTCGCTTTGGGTGCAGTACGTTGAGGCTTACATGTA
TATACAGTACAGTAAACCGTACTTGTACATAGTTTTCAGTCCTTGGGATG
AGGTGATCTTACAGTTGTTTTATTAATAGTGTGAAAACTATTATTCACAG
TGTCCTTGGGGTGAGACGATCGTGCAGTTGGTTTTGGTGTGTGTTTCTTT
TCTTTGTTTTCCAAGGTTTGGGGGAAGTTTTTGTTGAGAGGTTTTACTTT
AACGTGCGCGACGCATTTGAAGTGTGCACGCTTTTTCCCTCATCTTCCAC
GAAAAGGTCTTGTTTGCCGTCTACGATGAAGGCTGTTCAATCACCCGCCC
AGCCGGACCCATAGAGCTACAACTTGCAGCGCCAGTCGTTTGGTTTCAAC
TCCGGCGCAACGATAACGATCGACTCAAGACCGGTAGCACTTGACCCTGG
GGGGTACTACTTGAAATAACTTTGAAGCGCCAGACGAAAGCGAGTTCGTT
TTATTCCTTTCGGGGGTTCTCGAAAGCGTTTGCCGCCGTTGTAAAAGCGG
CGCGCTCTAACGGCGAACGAAACACAACAAATAACTCGTGCCATGCATTA
TTATATCATGAGCCTCTTCACATCCGCCGTGAGAGTTAAG

Coding sequence (CDS) from alignment at F-serratus_M_contig93:391506..395995-

>mRNA_F-serratus_M_contig93.20683.1 ID=mRNA_F-serratus_M_contig93.20683.1|Name=mRNA_F-serratus_M_contig93.20683.1|organism=Fucus serratus male|type=CDS|length=2910bp|location=Sequence derived from alignment at F-serratus_M_contig93:391506..395995- (Fucus serratus male)
ATGAATCGTTTCCCAGCATCAGGCTTTGAACAACGGGCCAGCATTCTGCA
AGGATCGGAGGAGCTGATCGTGAAACTCGTGTGTGGGGGAACCACGCCGG
AGCAGTGGGCGGAATGGCTTCGTGCGCCGCTGGAGCATGCTGCGGCACAG
GCAAACTATGAGCTAGTGGAGAAGCTCCTGAAGGCTGGCGCGAATGGAAA
AGCAGGATCGCGCGGGTGCCTTGGGCGAACGCTTCTAGATGCGGCAGCCG
AAGGAGGAAGCGAGAAGATGAATCGTTTCCCAGCATCAGGCTTTGAACAA
CGGGCCAGCATTCTGCAAGGATCGGAGGAGCTGATCGTGAAACTCGTGTG
TGGGGGAACCACGCCGGAGCAGTGGGCGGAATGGCTTCGTGCGCCGCTGG
AGCATGCTGCGGCACAGGCAAACTATGAGCTAGTGGAGAAGCTCCTGAAG
GCTGGCGCGAATGGAAAAGCAGGATCGCGCGGGTGCCTTGGGCGAACGCT
TCTAGATGCGGCAGCCGAAGGAGGAAGCGAGAAGGTGGTGTCCGCTCTCC
TGGATGCGGGATCCAAGCCGGACATCAACTTGAAGACCAAGGGCACCCAC
TGCACACCGCTGCATCGCGCCGCTCGTGGAGGACATGCCGACGCGGCCAG
GATACTCTTGATGGCGGGAGCGAGCGTCGACTCCCTGGACATTGGTCAGT
GCACTCCGCTGCACCTTGCTTTCGTGAAAGACGGGGACCAGCTCGCTTGT
GACCTTTTGCTGAGCGGAGCCAATCCTGGCGCTCAAGACGTGTACGGCTT
CTGTCCTATCCACTACGCCGCGTCCCGAGGTCGGGATCGGAGCGTTCAGC
TGATGCTGCACAAAGGTGTGGACGTCAACATCCGGAACACTCGTGGACTG
ACACCCCTCCATGCGGCGGCCATCGCGGGTCGCGTCGATGCGGCAACCAT
CCTTCTGGATGCCGGCGCCGACTCGGGGGCCTCCGATGCGCTGGGGAACA
CTCCTCTGCACCACGCCGCCGAACACAACATGTATGACATAGTTCAAGCG
CTCGTTAATGCAGGGGCGAACATCGGAGTCCGCGCTAGCGACGGGTGGAC
ACCGCTTCATCGCGCGGCCTTCCACAGCAGTCCCGCGGCCATGCTCGCCC
TCCTGCGCCAAGGAGCCGACGTCAAGATGGCGACAAACGCCGGGTGGAGT
GCGTTGCACGTTGCGTGTTGGCGGGGCAACCCCGACGCGGCGGAATTGCT
GCTGCGGTGGGGGGCAGATGAACAGTCCTCGGTCCCTACCGGGAAGACCG
CTCGCGATCTGATACCATCGGTCAAGGATGCTTCAGAGAAAGACCTCCCT
GCTCTAGAGCAGCTGGCCAGGCTGCTGGCGCACGCACCAAGAGATCGGGC
GTGGCGTCGACGGGGTTTTCTTGTGCTGTGCCGGGATCACCTTGGAGTGG
ACAGGGCACGACGAGGAGCCGGGCGCAACGACGCCGGCGGAGTGGCCACG
CGGGGGCACTCAACCGGCGGAGCACGCAAGAAGCAGGCGAAGAGGGAGGT
GATGTTCGTTTGCGGGACATCGCAGGCTGGAGGTGGTTCTCCTGGGTCGG
CGAGCTCGCGCAGCGCGGCGCGCGGGGAAAAGGTCGCCGATTCAGGCTCT
GTCGATGTGGTGGCCTGGGCGGTAGGGCTCAAGCAGACGATTCTTTTCAG
GAAGATTATTGGTTACCTCTAGGTGGTGTCCGCTCTCCTGGATGCGGGAT
CCAAGCCGGACATCAACTTGAAGACCAAGGGCACCCACTGCACACCGCTG
CATCGCGCCGCTCGTGGAGGACATGCCGACGCGGCCAGGATACTCTTGAT
GGCGGGAGCGAGCGTCGACTCCCTGGACATTGGTCAGTGCACTCCGCTGC
ACCTTGCTTTCGTGAAAGACGGGGACCAGCTCGCTTGTGACCTTTTGCTG
AGCGGAGCCAATCCTGGCGCTCAAGACGTGTACGGCTTCTGTCCTATCCA
CTACGCCGCGTCCCGAGGTCGGGATCGGAGCGTTCAGCTGATGCTGCACA
AAGGTGTGGACGTCAACATCCGGAACACTCGTGGACTGACACCCCTCCAT
GCGGCGGCCATCGCGGGTCGCGTCGATGCGGCAACCATCCTTCTGGATGC
CGGCGCCGACTCGGGGGCCTCCGATGCGCTGGGGAACACTCCTCTGCACC
ACGCCGCCGAACACAACATGTATGACATAGTTCAAGCGCTCGTTAATGCA
GGGGCGAACATCGGAGTCCGCGCTAGCGACGGGTGGACACCGCTTCATCG
CGCGGCCTTCCACAGCAGTCCCGCGGCCATGCTCGCCCTCCTGCGCCAAG
GAGCCGACGTCAAGATGGCGACAAACGCCGGGTGGAGTGCGTTGCACGTT
GCGTGTTGGCGGGGCAACCCCGACGCGGCGGAATTGCTGCTGCGGTGGGG
GGCAGATGAACAGTCCTCGGTCCCTACCGGGAAGACCGCTCGCGATCTGA
TACCATCGGTCAAGGATGCTTCAGAGAAAGACCTCCCTGCTCTAGAGCAG
CTGGCCAGGCTGCTGGCGCACGCACCAAGAGATCGGGCGTGGCGTCGACG
GGGTTTTCTTGTGCTGTGCCGGGATCACCTTGGAGTGGACAGGGCACGAC
GAGGAGCCGGGCGCAACGACGCCGGCGGAGTGGCCACGCGGGGGCACTCA
ACCGGCGGAGCACGCAAGAAGCAGGCGAAGAGGGAGGTGATGTTCGTTTG
CGGGACATCGCAGGCTGGAGGTGGTTCTCCTGGGTCGGCGAGCTCGCGCA
GCGCGGCGCGCGGGGAAAAGGTCGCCGATTCAGGCTCTGTCGATGTGGTG
GCCTGGGCGGTAGGGCTCAAGCAGACGATTCTTTTCAGGAAGATTATTGG
TTACCTCTAG