mRNA_F-serratus_M_contig927.20655.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig927.20655.1
Unique NamemRNA_F-serratus_M_contig927.20655.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig927.20655.1 vs. uniprot
Match: D8LBH4_ECTSI (COP9 signalosome complex subunit 6 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBH4_ECTSI)

HSP 1 Score: 432 bits (1110), Expect = 6.820e-149
Identity = 238/368 (64.67%), Postives = 256/368 (69.57%), Query Frame = 1
Query:    1 LTVISISDHHTRVSMGGGAQEAGGRVIGLLFGSQNGLDVSIFDAMEVACTASGKDGVELNEGLIEKQRDLYTAVYPMYEILGWYTVGTEATELDLRLQRQMMKFNQAPLFLLMNPNPAQGSKELPVLIHESEAHTLDGRSKLIFVQLAFQASSLLLEAHRFSRWKYRRAILEVRSINRVVPPSW*RYLNYLNMLSTVHEQWEHSTIRYNSTSYFLVACAGAYNGDPFGTC*TTVNDCTV*LETTQAEQISVEHVAKATPTDGISSIDLHAGAVSTSLRTLLARIEILRRLLQETKDGNIAVDYPLLRQISSICNQLPTMGGEQFSEEFMREFNDSLSVTYLACVQKSAGSLNDLADKFMVAYSHRRAL 1104
            LTVI+ISDHHTRVS GGGAQEAGGRVIGLLFGSQNG DVSI+DAMEVACTA G +G+ELNE L+EKQ++LYTAVYPMYEILGWYTVGTE TELDL +QRQM KFN +PLFLLMNP+PAQGSKELPVLIHESE+H LDG ++  FVQLAFQ                                                                                          LETTQAEQISVEHVAKATPTDGISSIDLHAGAVSTSLRTLLARIEILRR L+ETK GNI+VDYPLLRQISSICNQLPTM G QFSEEFMREFNDSLSV YLA VQKSAGS+NDLADKFM A+ HRR +
Sbjct:   41 LTVITISDHHTRVSTGGGAQEAGGRVIGLLFGSQNGRDVSIYDAMEVACTAVGANGLELNEALVEKQKNLYTAVYPMYEILGWYTVGTEVTELDLGIQRQMTKFNSSPLFLLMNPSPAQGSKELPVLIHESESHMLDGVAQSTFVQLAFQ------------------------------------------------------------------------------------------LETTQAEQISVEHVAKATPTDGISSIDLHAGAVSTSLRTLLARIEILRRFLEETKKGNISVDYPLLRQISSICNQLPTMDGAQFSEEFMREFNDSLSVAYLASVQKSAGSMNDLADKFMTAFGHRRPI 318          
BLAST of mRNA_F-serratus_M_contig927.20655.1 vs. uniprot
Match: A0A6H5KLY7_9PHAE (JAB_MPN domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLY7_9PHAE)

HSP 1 Score: 256 bits (653), Expect = 1.730e-81
Identity = 126/152 (82.89%), Postives = 139/152 (91.45%), Query Frame = 1
Query:    1 LTVISISDHHTRVSMGGGAQEAGGRVIGLLFGSQNGLDVSIFDAMEVACTASGKDGVELNEGLIEKQRDLYTAVYPMYEILGWYTVGTEATELDLRLQRQMMKFNQAPLFLLMNPNPAQGSKELPVLIHESEAHTLDGRSKLIFVQLAFQAS 456
            LTVI+ISDHHTRVS GGGAQEAGGRVIGLLFGSQNG DVSI+DAMEVACTA G +G+ELNE L+EKQ+DLYTAVYPMYEILGWYTVGTE TELDL +QRQM KFN +PLFLLMNP+PAQGSKELPVLIHESE+H LDG ++  FVQLAFQA+
Sbjct:   41 LTVITISDHHTRVSTGGGAQEAGGRVIGLLFGSQNGRDVSIYDAMEVACTAVGANGLELNEALVEKQKDLYTAVYPMYEILGWYTVGTEVTELDLGIQRQMTKFNSSPLFLLMNPSPAQGSKELPVLIHESESHMLDGVAQSTFVQLAFQAT 192          
BLAST of mRNA_F-serratus_M_contig927.20655.1 vs. uniprot
Match: A0A7S2B7N9_9STRA (COP9 signalosome complex subunit 6 n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2B7N9_9STRA)

HSP 1 Score: 213 bits (542), Expect = 3.720e-63
Identity = 130/368 (35.33%), Postives = 181/368 (49.18%), Query Frame = 1
Query:    1 LTVISISDHHTRVSMGGGAQEAGGRVIGLLFGSQNGLDVSIFDAMEVACTASGKDGVE-LNEGLIEKQRDLYTAVYPMYEILGWYTVGTEATELDLRLQRQMMKFNQAPLFLLMNPNPAQGSKELPVLIHESE-AHTLDGRSKLIFVQLAFQASSLLLEAHRFSRWKYRRAILEVRSINRVVPPSW*RYLNYLNMLSTVHEQWEHSTIRYNSTSYFLVACAGAYNGDPFGTC*TTVNDCTV*LETTQAEQISVEHVAKATPTDGISSIDLHAGAVSTSLRTLLARIEILRRLLQETKDGNIAVDYPLLRQISSICNQLPTMGGEQFSEEFMREFNDSLSVTYLACVQKSAGSLNDLADKFMVAYSHRR 1098
            L +I+ISDH T +  G   +  G +V+GLL+G Q GL+VSI DA E+  T  G DGV  +    +  Q+DLYT VY  YE+LGWY+VG +A   D+ + R+M K+N++P FLLM+P+P   + +LP+ ++ES+     D    ++FV   FQ                                                                                          L+T QAE+I++E +AKATPTDG++S+DLH  ++  SLRTL  R + L   L+ TK G +  DY LLRQ+SSICNQLP +   +   +F+ E+ND L V YLA V KS+ SL DL DK     SH R
Sbjct:   31 LAIITISDHFTCIESGASVKPRGSKVLGLLWGKQQGLEVSIMDAQELHYTL-GDDGVPVITAEKVNSQKDLYTEVYKNYELLGWYSVGIDADGKDMAVHREMTKYNESPFFLLMHPSPDPEASDLPISLYESKMVMGADDTPTIVFVTSEFQ------------------------------------------------------------------------------------------LQTMQAERITMERIAKATPTDGVASLDLHINSLGASLRTLNLRFDALLAFLKATKAGEVPTDYRLLRQVSSICNQLPAVDTAELKGDFITEYNDMLMVNYLASVTKSSASLGDLIDKHSAVVSHHR 307          
BLAST of mRNA_F-serratus_M_contig927.20655.1 vs. uniprot
Match: A0A7S2BCI8_9STRA (COP9 signalosome complex subunit 6 n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BCI8_9STRA)

HSP 1 Score: 200 bits (508), Expect = 5.710e-58
Identity = 114/365 (31.23%), Postives = 176/365 (48.22%), Query Frame = 1
Query:    1 LTVISISDHHTRVSMGGGAQEAGGRVIGLLFGSQNGLDVSIFDAMEVACTASGKDGVELNEGLIEKQRDLYTAVYPMYEILGWYTVGTEATELDLRLQRQMMKFNQAPLFLLMNPNPAQGSKELPVLIHESEAHTLDGRSKLIFVQLAFQASSLLLEAHRFSRWKYRRAILEVRSINRVVPPSW*RYLNYLNMLSTVHEQWEHSTIRYNSTSYFLVACAGAYNGDPFGTC*TTVNDCTV*LETTQAEQISVEHVAKATPTDGISSIDLHAGAVSTSLRTLLARIEILRRLLQETKDGNIAVDYPLLRQISSICNQLPTMGGEQFSEEFMREFNDSLSVTYLACVQKSAGSLNDLADKFMVAYSHR 1095
            L +I +SDH+T +  GG   + G +V+GLL+G Q GL+VSI DAME+  +        +    +   +DLY   +   ++LGWY+VG E  E+D+ + R+M K+N++P FLLMNPNP + +K+LP+ ++ESE H ++    ++FV   FQ                                                                                          L+T Q E+I     AK    +G +++DLH   VS+SL+TL +R   L + L+ TK+G +  DY LLRQ++S+CNQLP +  ++ S EF+ ++ND+L V YLA + K    LNDLA+KF +  + R
Sbjct:   38 LAIIGMSDHYTTIEAGGSLAKPGSKVLGLLWGRQQGLEVSIMDAMELGYSLDANGVPVIEAEKVNGMKDLYLENFKDRDLLGWYSVGLEVVEMDMAIHREMTKYNESPFFLLMNPNPDEEAKDLPISLYESEMHVINDTPTMLFVTCEFQ------------------------------------------------------------------------------------------LQTMQMERIXXXXXAKEKAHEGEATLDLHMNTVSSSLKTLSSRASALVQYLEATKNGTVPTDYRLLRQVASVCNQLPAVDTDELSGEFVGDYNDTLMVNYLASITKGTNELNDLAEKFNMISTQR 312          
BLAST of mRNA_F-serratus_M_contig927.20655.1 vs. uniprot
Match: F0Y0C1_AURAN (Trehalase n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y0C1_AURAN)

HSP 1 Score: 196 bits (499), Expect = 3.490e-52
Identity = 122/360 (33.89%), Postives = 177/360 (49.17%), Query Frame = 1
Query:    1 LTVISISDHHTRVSMGGGAQEAGGRVIGLLFGSQNGLDVSIFDAMEVACTASGKDGVELNEGLIEKQRDLYTAVYPMYEILGWYTVGTEATELDLRLQRQMMKFNQAPLFLLMNPNPAQGSKELPVLIHESEAHTLDGRSKLIFVQLAFQASSLLLEAHRFSRWKYRRAILEVRSINRVVPPSW*RYLNYLNMLSTVHEQWEHSTIRYNSTSYFLVACAGAYNGDPFGTC*TTVNDCTV*LETTQAEQISVEHVAKATPTDGISSIDLHAGAVSTSLRTLLARIEILRRLLQETKDGNIAVDYPLLRQISSICNQLPTMGGEQFSEEFMREFNDSLSVTYLACVQKSAGSLNDLADKFMV 1080
            L ++ +SDH TRV +GG        V+GLLFG Q GLDV++FDA+E++  A GK    L+   ++KQ +L+T VY   E+LGWY +   AT   L L R+ + +N++PL L+M+P P+  SK+LP+ I E+E   +D    ++F  L F                                                                                           LET QAE+IS+E VAK  PTDG S++D H  AV TSLRTL +R+ +L   L+    G    D+ LLRQ+S +C+ LPT G    + + MR++ND+L V+YLA V K+A ++NDL++KFM+
Sbjct:  847 LAIVGVSDHFTRVKLGGARVAPDSPVLGLLFGKQVGLDVAVFDAIELSM-ADGK----LDHDFLKKQAELFTDVYADRELLGWYCLAKSATPAHLDLHREFLAYNESPLCLMMDPEPSAESKDLPITILEAEVQVVDDVPTMLFATLPFT------------------------------------------------------------------------------------------LETLQAERISMEIVAKTAPTDGESALDTHVEAVDTSLRTLGSRVAVLVDYLRAVAGGKAEPDFALLRQVSGLCDTLPTGGAPDQTRDLMRDYNDALMVSYLASVTKNANAVNDLSEKFML 1111          
BLAST of mRNA_F-serratus_M_contig927.20655.1 vs. uniprot
Match: A0A7S2S2E8_9STRA (COP9 signalosome complex subunit 6 n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S2E8_9STRA)

HSP 1 Score: 185 bits (470), Expect = 4.340e-52
Identity = 112/368 (30.43%), Postives = 184/368 (50.00%), Query Frame = 1
Query:    1 LTVISISDHHTRVSMGGGAQEAGGRVIGLLFGSQNGLDVSIFDAMEVACTASGKDGVELNEGLIEKQRDLYTAVYPMYEILGWYTVGTEATELDLRLQRQMMKFNQAPLFLLMNPNPAQGSKELPVLIHESEAHTLDGRSKLIFVQLAFQASSLLLEAHRFSRWKYRRAILEVRSINRVVPPSW*RYLNYLNMLSTVHEQWEHSTIRYNSTSYFLVACAGAYNGDPFGTC*TTVNDCTV*LETTQAEQISVEHVAKATPTDGISSIDLHAGAVSTSLRTLLARIEILRRLLQETKDGNIAVDYPLLRQISSICNQLPTMGGEQFSEEFMREFNDSLSVTYLACVQKSAGSLNDLADKFMVAYSHRRAL 1104
            L ++++SDH T +  G   +  G +V+G+L+G Q GL VSI DA+E+A     +    ++   + +Q+ LY  VY  +E+LGWY+VG E T +D  +Q++  K+N++P FLL+ P P   +K+LP+ ++ES+   ++   K+ FV  +FQ                                                                                          L+TTQAE+I++E V+KA+ T G+SS+DLH   +S+SLR+L +R +IL   L+   D  + VD+ LLR+I+S+CNQLP    ++    F+ +FND+L + +LA + KS+ S+++L+ KF  A+S   AL
Sbjct:   60 LAIVAVSDHCTGIQTGASTKPPGSKVLGILWGKQQGLQVSITDAVELAYELDAQGMPVIDPEAVNQQKSLYMEVYKGHEMLGWYSVGEEVTPVDGLIQQEFTKYNESPFFLLVQPVPDPEAKQLPLTLYESQWTQVNEEMKMTFVPCSFQ------------------------------------------------------------------------------------------LDTTQAERITMEAVSKASTTAGVSSMDLHVQELSSSLRSLASRTQILVSYLKAIADQQVPVDHKLLREIASVCNQLPAADAQELQGAFLSDFNDTLLINHLALITKSSNSVSELSTKFS-AFSTTSAL 336          
BLAST of mRNA_F-serratus_M_contig927.20655.1 vs. uniprot
Match: A0A835YT38_9STRA (JAB_MPN domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YT38_9STRA)

HSP 1 Score: 185 bits (469), Expect = 4.810e-52
Identity = 116/374 (31.02%), Postives = 184/374 (49.20%), Query Frame = 1
Query:    1 LTVISISDHHTRVSMGGGAQEAGGRVIGLLFGSQNGLDVSIFDAMEVACTASGKDGVELNEGLIEKQRDLYTAVYPMYEILGWYTVGTEATELDLRLQRQMMKFNQAPLFLLMNPNPAQGSKELPVLIHESEAHTLDG-RSKLIFVQLAFQASSLLLEAHRFSRWKYRRAILEVRSINRVVPPSW*RYLNYLNMLSTVHEQWEHSTIRYNSTSYFLVACAGAYNGDPFGTC*TTVNDCTV*LETTQAEQISVEHVAKATPTDGISSIDLHAGAVSTSLRTLLARIEILRRLLQETKDGNIAVDYPLLRQISSICNQLPTMGGEQ--------FSEEFMREFNDSLSVTYLACVQKSAGSLNDLADKFMVAYSHR 1095
            L +I+ISDH+TRVS GGG      +++G+LFG ++G ++ I+DA E+     G + + L++  + KQ +LY AVYP Y++LGWY+VG E    D++LQ+QM      P+F+L++P P + +K LPV +++SE     G  +  +FVQ +FQ                                                                                          L+T QAEQI +EHVA++TP +G S+I+ HA  ++TSL  L +R+ +LRR L   + G++  D+ LLRQI+++ ++L  MG            SE   R+  D+L+VT LA +QK A +++  A KF +A+S +
Sbjct:   33 LAIITISDHYTRVSTGGGVPPRDAKILGVLFGERSGAEIGIYDASEIGYDVVGGE-IVLSQASVAKQVELYEAVYPTYKVLGWYSVGLEPCPSDIKLQQQMKTHCANPIFVLLDPEPPKDAKALPVTVYQSEDQAGGGGAAATVFVQGSFQ------------------------------------------------------------------------------------------LQTVQAEQIGMEHVARSTPAEGSSAIERHATTMTTSLTALASRLAVLRRYLVAVRGGDVPADHKLLRQITAVTSELRAMGNASGSGGGDAALSEALARDRCDALAVTALAALQKGAAAMDAAAHKFNLAHSDK 315          
BLAST of mRNA_F-serratus_M_contig927.20655.1 vs. uniprot
Match: A0A2D4BSB4_PYTIN (COP9 signalosome complex subunit 6 n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BSB4_PYTIN)

HSP 1 Score: 174 bits (442), Expect = 4.260e-48
Identity = 111/371 (29.92%), Postives = 178/371 (47.98%), Query Frame = 1
Query:    1 LTVISISDHHTRVSMG------GGAQEAGGRVIGLLFGSQNGLDVSIFDAMEVACTASGKDGVELNEGLIEKQRDLYTAVYPMYEILGWYTVGTEATELDLRLQRQMMKFNQAPLFLLMNPNPAQGS--KELPVLIHESEAHTLDGRSKLIFVQLAFQASSLLLEAHRFSRWKYRRAILEVRSINRVVPPSW*RYLNYLNMLSTVHEQWEHSTIRYNSTSYFLVACAGAYNGDPFGTC*TTVNDCTV*LETTQAEQISVEHVAKATPT--DGISSIDLHAGAVSTSLRTLLARIEILRRLLQETKDGNIAVDYPLLRQISSICNQLPTMGGEQFSEEFMREFNDSLSVTYLACVQKSAGSLNDLADKFMVA 1083
            L V++I+DH+TR            A  A  +VIG LFG QNGLDV++FD+ E+         V +++  +  +   ++ V+P +E+LGWYTVG++A + DL + R +M+FN++PLFLLM+P P   S  K+LP+ + ESE H LDG   +IFV+ +++                                                                                          +ET++ E I V+ ++K  P      SS+  + G V  +++ L  ++E++ R L+  K G I+ D+ LLRQISS+CNQLP +   QF   F++E+ND++ V+YLA + K A + N + D+F +A
Sbjct:   35 LVVMNIADHYTRQKRNFQHENKKAALSALPQVIGALFGVQNGLDVAVFDSFEIKYDLGSNGDVVIDKEFLTSRIQQFSQVFPGFELLGWYTVGSKAKQSDLTIHRSIMEFNESPLFLLMDPTPQGMSTKKKLPISLFESELHVLDGSPTMIFVKTSYK------------------------------------------------------------------------------------------IETSEMEGICVDRISKIAPMGDSSKSSLXPYLGNVRDAIKMLQRQVEVIVRWLEAVKKGEISADHNLLRQISSLCNQLPALSSPQFDASFLQEYNDAMLVSYLATLTKGATNANTVIDRFAMA 315          
BLAST of mRNA_F-serratus_M_contig927.20655.1 vs. uniprot
Match: A0A2G5F758_AQUCA (COP9 signalosome complex subunit 6 n=2 Tax=Thalictroideae TaxID=1463137 RepID=A0A2G5F758_AQUCA)

HSP 1 Score: 167 bits (423), Expect = 2.430e-45
Identity = 109/381 (28.61%), Postives = 179/381 (46.98%), Query Frame = 1
Query:    1 LTVISISDHHTRV---SMGGGAQEAGG----------RVIGLLFGSQNGLDVSIFDAMEVACTASGKDGVELNEGLIEKQRDLYTAVYPMYEILGWYTVGTEATELDLRLQRQMMKFNQAPLFLLMNPNPAQGSKELPVLIHESEAHTLDGRSKLIFVQLAFQASSLLLEAHRFSRWKYRRAILEVRSINRVVPPSW*RYLNYLNMLSTVHEQWEHSTIRYNSTSYFLVACAGAYNGDPFGTC*TTVNDCTV*LETTQAEQISVEHVAKATPTDGISS---IDLHAGAVSTSLRTLLARIEILRRLLQETKDGNIAVDYPLLRQISSICNQLPTMGGEQFSEEFMREFNDSLSVTYLACVQKSAGSLNDLADKFMVAYSHR 1095
            L +++ISDH+TRV   S G     + G          RV G + G Q G  V IF++ E+    S      L+   +EK+++LY  V+P + ILGWY+ G++A ELD+++ R +M  N++P+++L+NP      K+LPV I+ESE H +DG  +LIFV+ ++                                                                                           +ET +AE+ISV+HVA   P+DG S+   +  H   + ++++ L +RI++L   L   + G+I  D  L RQ+SS+  +LP +   +F ++F+ E+ND+L VTYLA +   + ++N+L DKF +AY  +
Sbjct:   20 LVILNISDHYTRVKSQSHGAPVNNSNGASASISLPLPRVFGCVIGIQRGRTVEIFNSFELLYDESTNS---LDRIFLEKKQELYKKVFPNFYILGWYSTGSDAQELDMQIHRALMDINESPVYVLLNPAINHAHKDLPVTIYESELHVIDGIPQLIFVRSSYT------------------------------------------------------------------------------------------IETVEAERISVDHVAHLKPSDGGSAATQLAAHLTGIHSAIKMLNSRIKVLHEYLLAMQKGDIPYDNSLARQVSSLLRRLPAIESGKFQDDFLMEYNDTLLVTYLAMITNCSSTMNELVDKFNIAYDRQ 307          
BLAST of mRNA_F-serratus_M_contig927.20655.1 vs. uniprot
Match: A0A176W4C4_MARPO (COP9 signalosome complex subunit 6 n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A176W4C4_MARPO)

HSP 1 Score: 166 bits (421), Expect = 2.710e-45
Identity = 99/366 (27.05%), Postives = 177/366 (48.36%), Query Frame = 1
Query:    1 LTVISISDHHTRV-SMGGGAQEAGGRVIGLLFGSQNGLDVSIFDAMEVACTASGKDGVELNEGLIEKQRDLYTAVYPMYEILGWYTVGTEATELDLRLQRQMMKFNQAPLFLLMNPNPAQGSKELPVLIHESEAHTLDGRSKLIFVQLAFQASSLLLEAHRFSRWKYRRAILEVRSINRVVPPSW*RYLNYLNMLSTVHEQWEHSTIRYNSTSYFLVACAGAYNGDPFGTC*TTVNDCTV*LETTQAEQISVEHVAKATPTDGISS---IDLHAGAVSTSLRTLLARIEILRRLLQETKDGNIAVDYPLLRQISSICNQLPTMGGEQFSEEFMREFNDSLSVTYLACVQKSAGSLNDLADKFMVAY 1086
            L +++I+DHHTRV +  GGA     RV G + G Q+G  V IF++ E+    +      L+   +E +++ Y  V+P Y++LGWY+ G++  + D+ + + +M  N++P+++L+NP      K+LP+ ++ESE H ++G   LIFV+ ++                                                                                           +ET +AE+ISV+HVA   P+DG ++   +  H   + ++++ L +R+++L   L   + GN+  ++ LLRQISS+  +LP +   +F ++F+ E+ND+L +TYLA + K + ++N+L DKF VAY
Sbjct:   14 LVILNIADHHTRVKAQSGGASGRPPRVFGCVLGVQSGRTVEIFNSFELKYDPALDC---LDRQFLETKQEQYKKVFPKYDVLGWYSTGSDVQDSDMLIHKALMDINESPIYILLNPAINHAQKDLPITLYESELHVIEGVPSLIFVKSSYT------------------------------------------------------------------------------------------IETVEAERISVDHVAHIKPSDGSTAATQLAAHLTGMHSAIKMLNSRVKVLHHHLVSIQKGNVPYEHSLLRQISSLVRRLPAIDSTKFQDDFLMEYNDTLLMTYLATITKCSSTINELVDKFNVAY 286          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig927.20655.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LBH4_ECTSI6.820e-14964.67COP9 signalosome complex subunit 6 n=1 Tax=Ectocar... [more]
A0A6H5KLY7_9PHAE1.730e-8182.89JAB_MPN domain-containing protein n=1 Tax=Ectocarp... [more]
A0A7S2B7N9_9STRA3.720e-6335.33COP9 signalosome complex subunit 6 n=1 Tax=Dictyoc... [more]
A0A7S2BCI8_9STRA5.710e-5831.23COP9 signalosome complex subunit 6 n=1 Tax=Florenc... [more]
F0Y0C1_AURAN3.490e-5233.89Trehalase n=1 Tax=Aureococcus anophagefferens TaxI... [more]
A0A7S2S2E8_9STRA4.340e-5230.43COP9 signalosome complex subunit 6 n=1 Tax=Rhizoch... [more]
A0A835YT38_9STRA4.810e-5231.02JAB_MPN domain-containing protein n=1 Tax=Tribonem... [more]
A0A2D4BSB4_PYTIN4.260e-4829.92COP9 signalosome complex subunit 6 n=1 Tax=Pythium... [more]
A0A2G5F758_AQUCA2.430e-4528.61COP9 signalosome complex subunit 6 n=2 Tax=Thalict... [more]
A0A176W4C4_MARPO2.710e-4527.05COP9 signalosome complex subunit 6 n=2 Tax=Marchan... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig927contigF-serratus_M_contig927:97278..101890 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score225.7
Seed ortholog evalue1.6e-56
Seed eggNOG ortholog2880.D8LBH4
Preferred nameCOPS6
KEGG rclassRC00049
KEGG koko:K01194,ko:K01410,ko:K12179
KEGG ReactionR00010
KEGG Pathwayko00500,ko01100,map00500,map01100
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000338,GO:0000715,GO:0000909,GO:0002009,GO:0003006,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006281,GO:0006283,GO:0006289,GO:0006464,GO:0006508,GO:0006511,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0007275,GO:0007276,GO:0007281,GO:0007283,GO:0008150,GO:0008152,GO:0008180,GO:0009056,GO:0009057,GO:0009653,GO:0009888,GO:0009987,GO:0010387,GO:0016043,GO:0016333,GO:0019538,GO:0019827,GO:0019941,GO:0019953,GO:0022412,GO:0022414,GO:0022607,GO:0030154,GO:0030163,GO:0030582,GO:0030584,GO:0030718,GO:0031647,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0032504,GO:0032991,GO:0033554,GO:0034622,GO:0034641,GO:0036099,GO:0036211,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043632,GO:0043687,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0046483,GO:0046983,GO:0048138,GO:0048140,GO:0048232,GO:0048468,GO:0048608,GO:0048609,GO:0048729,GO:0048731,GO:0048856,GO:0048869,GO:0050821,GO:0050896,GO:0051276,GO:0051603,GO:0051704,GO:0051716,GO:0060429,GO:0061458,GO:0065003,GO:0065007,GO:0065008,GO:0070013,GO:0070646,GO:0070647,GO:0070791,GO:0071704,GO:0071840,GO:0075259,GO:0090304,GO:0098727,GO:1901360,GO:1901564,GO:1901565,GO:1901575
EggNOG free text desc.protein deneddylation
EggNOG OGsCOG1310@1,KOG3050@2759
EC3.2.1.28,3.4.24.59
COG Functional cat.V
CAZyGH37
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00537,ko01000,ko01002,ko03029,ko04121
Exons6
Model size1104
Cds size513
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig927.20655.1prot_F-serratus_M_contig927.20655.1Fucus serratus malepolypeptideF-serratus_M_contig927 97320..99746 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932676.3705409-UTR-F-serratus_M_contig927:97277..973191622932676.3705409-UTR-F-serratus_M_contig927:97277..97319Fucus serratus maleUTRF-serratus_M_contig927 97278..97319 +
1690964417.234114-UTR-F-serratus_M_contig927:97277..973191690964417.234114-UTR-F-serratus_M_contig927:97277..97319Fucus serratus maleUTRF-serratus_M_contig927 97278..97319 +
1622932676.4432378-UTR-F-serratus_M_contig927:99746..999871622932676.4432378-UTR-F-serratus_M_contig927:99746..99987Fucus serratus maleUTRF-serratus_M_contig927 99747..99987 +
1690964417.2809832-UTR-F-serratus_M_contig927:99746..999871690964417.2809832-UTR-F-serratus_M_contig927:99746..99987Fucus serratus maleUTRF-serratus_M_contig927 99747..99987 +
1622932676.4704347-UTR-F-serratus_M_contig927:100778..1008711622932676.4704347-UTR-F-serratus_M_contig927:100778..100871Fucus serratus maleUTRF-serratus_M_contig927 100779..100871 +
1690964417.28929-UTR-F-serratus_M_contig927:100778..1008711690964417.28929-UTR-F-serratus_M_contig927:100778..100871Fucus serratus maleUTRF-serratus_M_contig927 100779..100871 +
1622932676.5007298-UTR-F-serratus_M_contig927:101312..1014131622932676.5007298-UTR-F-serratus_M_contig927:101312..101413Fucus serratus maleUTRF-serratus_M_contig927 101313..101413 +
1690964417.2978191-UTR-F-serratus_M_contig927:101312..1014131690964417.2978191-UTR-F-serratus_M_contig927:101312..101413Fucus serratus maleUTRF-serratus_M_contig927 101313..101413 +
1622932676.5567234-UTR-F-serratus_M_contig927:101776..1018901622932676.5567234-UTR-F-serratus_M_contig927:101776..101890Fucus serratus maleUTRF-serratus_M_contig927 101777..101890 +
1690964417.3066077-UTR-F-serratus_M_contig927:101776..1018901690964417.3066077-UTR-F-serratus_M_contig927:101776..101890Fucus serratus maleUTRF-serratus_M_contig927 101777..101890 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932676.3880765-CDS-F-serratus_M_contig927:97319..974881622932676.3880765-CDS-F-serratus_M_contig927:97319..97488Fucus serratus maleCDSF-serratus_M_contig927 97320..97488 +
1690964417.2487965-CDS-F-serratus_M_contig927:97319..974881690964417.2487965-CDS-F-serratus_M_contig927:97319..97488Fucus serratus maleCDSF-serratus_M_contig927 97320..97488 +
1622932676.4064536-CDS-F-serratus_M_contig927:99007..990961622932676.4064536-CDS-F-serratus_M_contig927:99007..99096Fucus serratus maleCDSF-serratus_M_contig927 99008..99096 +
1690964417.2640693-CDS-F-serratus_M_contig927:99007..990961690964417.2640693-CDS-F-serratus_M_contig927:99007..99096Fucus serratus maleCDSF-serratus_M_contig927 99008..99096 +
1622932676.4280322-CDS-F-serratus_M_contig927:99491..997461622932676.4280322-CDS-F-serratus_M_contig927:99491..99746Fucus serratus maleCDSF-serratus_M_contig927 99492..99746 +
1690964417.2725503-CDS-F-serratus_M_contig927:99491..997461690964417.2725503-CDS-F-serratus_M_contig927:99491..99746Fucus serratus maleCDSF-serratus_M_contig927 99492..99746 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig927.20655.1

>prot_F-serratus_M_contig927.20655.1 ID=prot_F-serratus_M_contig927.20655.1|Name=mRNA_F-serratus_M_contig927.20655.1|organism=Fucus serratus male|type=polypeptide|length=171bp
MGGGAQEAGGRVIGLLFGSQNGLDVSIFDAMEVACTASGKDGVELNEGLI
EKQRDLYTAVYPMYEILGWYTVGTEATELDLRLQRQMMKFNQAPLFLLMN
PNPAQGSKELPVLIHESEAHTLDGRSKLIFVQLAFQASSLLLEAHRFSRW
KYRRAILEVRSINRVVPPSW*
back to top

mRNA from alignment at F-serratus_M_contig927:97278..101890+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig927.20655.1 ID=mRNA_F-serratus_M_contig927.20655.1|Name=mRNA_F-serratus_M_contig927.20655.1|organism=Fucus serratus male|type=mRNA|length=4613bp|location=Sequence derived from alignment at F-serratus_M_contig927:97278..101890+ (Fucus serratus male)
CTGACAGTTATCTCGATATCAGACCACCACACTAGAGTGTCGATGGGAGG TGGGGCTCAAGAGGCAGGGGGGCGAGTCATCGGTCTCCTGTTCGGCTCTC AGAACGGGCTCGACGTGAGCATATTCGACGCGATGGAGGTGGCATGCACC GCATCGGGAAAGGACGGCGTGGAACTGAACGAGGGTCTGATCGAGAAGCA AAGAGATCTCTGTGAGTTACCAAAACACGTATGTGCCGGTTCTTCGAACA TCTACTGTACTGTACCGTTTCCGATACTTTCTTCATCCCACATGTCCACA ACAGATTCAGTCTGAGTGTGGAGAATGAGCAAGCTGACGCGGGACGGGAC TGCCGAACCTGTCTCGCAAGACCAAATTATCAGGCGCGAACGGGGACAGG GAATAAGTTTTTTTCCCTGTTCAGGTTCAGCTGACCACGAGCAGGATTGG CAGCCTTACCCGATGGATCCATACTCTGATTTATGTAATGAATATACATA CATACATACATACATACCAAAAGTGGGTGTGTGGGGGAAAGGAGGCACAC AAAAATCGATCCACCGATACCGGAAAAGGCAGCACCCGTCTGGAACTATT TTGAGGACTACCTGCCCTGCGCCGGCGGCCTCTCGGCTCTGAACGCCATG GGTACACTTTTGCGTGGCCTGATAAACTCTAATAAGGACTGACGCAATGG CGGCGGACGGTACAAATAAATGGACTCCTTCGCGGAAAACGGAAGGAATC CCGTGAGAAGGCACCAGATTCAGCCTATTAATAGTGTGGATAATAAGAAG GCTGACGCGAGGCGGGACGGCCGAACCTGTCTCGCGAGGCAAAATTTATC AGGCGTGAACGGGGATAGGGAAAAGTTAATTTTCCCAATTCAGCTGACCA CGACCAGGATTGGCAACCTTACCCGGTTTTGATCTAATACAGTCTTTTAA GCATACATATTGTCGCCCGACTGTTCTAGTAGGTAACCTGCACATCTGCT GGTGCAGAAGTCTTGAGTTCGATTCTTGCCAAAGCAGGATTTGTATTCTT TCTTCCGTAACGGAAAGCGTGAGTACGTGAGTGAGTTAACCATTGTGATT GGTTGACGAGTTGTAAGAGTACTGAACTTGTATCGCGATAAAAAAATCGT AAGGCGTGAACCAGGGAGAGATGGGAAGGTCCCTAGTGAGCACAGGCAGA ATGGTAATGAGGTCCATAGGCTATAAGTGTGATGAAATAAATATAAATAT AAATAAATACATAAGCTGTACATTGAGAACCGACGCTACACTTGAAATAT ATCCTCAACGAAACATACGAGCTCAGGCCAGTCATTCCGAGCCGTAGGAC CTCAGTGCATACTTAGCATTAAATTAACTTAAATACGTACATGATGCCGG ACGATGGTGACCCTAGGGCTCCGCTAGAGAAAAACCATGTTTATCTAACG GAAGCGCTGTCGCGGCTTGGCCGAAACCCGCTCACCTAACAAAGCACGGC CAAAGAATCGAGCTCAACGGATGACTGCCGTGGAACAGCTAAAGTCCTTC TCGCAGGAAGTATGCATCCTTTCACTCTTCGGTATCATTGCAAGTTCTCT CAATGTGCGGCATCAACGCCGTCGACGATGTCATCATGCTGCCGTCGCTT CCGCTTCGTTCTGTTTCCGTTTACCTGGTACGATTCAAGCTCGTCTTTTC GCTTTCCTTGTTTCGTCTTCCTATCAATAGACACTGCGGTTTACCCTATG TATGAGATTCTGGGATGGTACACGGTCGGCACGGAGGCCACGGAGCTCGA TCTACGCCTTCAACGACAGGTGCACGCCGCCAGAGTAGTCGTAGCACTGT ACTTCTGGTGTTCGCGTACCACGTTGTGTGGAGCATCGCGGACGTTCGTT TGTAGATCGTTTTGTTGCTGTACTGTACGTAGTAGCTTTTCCCATTTTCG CATGCGCCGGGTAACGACTCGCATCAGGTTAACCGGAGGTCTGTGGATTA ATATCAATTGATACCGCGTGCTGTAGTGTAGAATATCATGGGCTGGGGTG ACAATGCTGGTTGGAAACTGTCGTTACAACAGCTTCTACCCGCTTCCGCG TTCATCATCAGTCATATGCGGTGATTTTTCGTGCGAAACTCTTGAAATCA TCTTGAACTGAAGGCGTCACGCACTTGTCATCCGCCTTCCTCTCGTATGT CATCCATGTGGCAGATGATGAAATTCAATCAGGCCCCGCTGTTCCTACTG ATGAATCCTAACCCGGCGCAAGGCTCCAAAGAGCTTCCCGTGTTGATCCA TGAGTCGGAAGCGCACACGCTGGACGGGAGGTCCAAGCTGATTTTCGTTC AGCTGGCATTCCAGGCGAGTTCACTGCTGTTGGAAGCTCACCGATTTTCT CGCTGGAAATACCGTCGCGCCATCTTGGAAGTACGGTCTATTAATAGGGT TGTTCCACCATCATGGTAGCGCTATTTAAACTATCTAAACATGTTATCAA CAGTTCATGAACAATGGGAGCATTCTACCATTCGGTACAACAGTACGTCA TATTTTTTAGTGGCGTGCGCAGGAGCATATAACGGTGATCCCTTCGGTAC CTGCTGAACTACTGTTAATGACTGTACGGTTTAGCTCGAGACCACACAAG CGGAGCAAATATCAGTGGAGCACGTTGCCAAGGCTACCCCGACAGATGGG ATATCTTCAAGTGAGCTTAACCCTTTTGGTACTATCGGTCTGACAACGGC TATTTTTTTTGTCGTGACAGTCCTGTGCTGCTCGCGCTACTTTACATGGG CCAGCCACCATGATCACTCATTTTACAGTACAATGTCTACACACCCCAAG TAGTATACGCCTTCTTCGTCTCTAACTGTTGGTGTTAAGCGATTGTTAGT ACCAAACTAGTACGAGATTTTTCAGGAAAGCTGTAGTAAAGTCAAGTGAA GAACAAAGTTGGTTTGGGGTTTACATTTTGTACCGTGCACAGTTTTGCGG GGTTGATTCATGGTAGATCCTCGCTGAGCCGTATCTTGGGACTGCTTTTA GTTTGGGAAGGTGCTGTACTCGGGCTCCGGACCTCGCTGCCCAATCAAGG CTGGAAAATAAACAGACGGTCGACCGCCTGTTAAGCCCTCTCAAGTACCA AAGGGGTTAAGCCGTGCACCACCAACTTCGGAAACCATGTTGGACTGTTG GACTTCTGGAGTAAGGCGAAATGCAACCTTTTTTATTTATGTGGTGACTC GCAGTCGTCATGGAAGGAGGCATGTTCTAGATTGCCCTTTACAGTTTGTT GCGAGGTTATTGACGTCGTACTGCAAAGGAATACGCCCCTCGACTGAAAA CATATTTTGGCTGTAGTGCTTGTTGTGCATGCTCACGTCTAATATTATGT AACTTGTTGCTCAATGCAATGACAGTCGAAAAACAGGCGCTCTTTCGTCT CATCCGAGGGAAGGTGTGACGTTGTACCCTCCCCCGTTAAATGCTCTCCA GTTGACCTGCACGCAGGCGCGGTGAGCACGTCCCTGCGGACCCTTCTTGC CCGGATCGAGATACTAAGGAGATTGCTACAGGAAACAAAGGACGGTGAGA TCTTGTATTTTTAACAACACCGATAGCATTTACAACCTGGTTGTATCCGT GTCGATTTGGAAACGGAATTGTCCATATATACCATACTGCCTTGTTATTA GGGAAAATGAAATTCTGCCTTTAGAAGTCGTATTTTCTTTTTCAATGATA ACTATCCAGTATGCGCGACTTCCTACGGTTTGACCAGGTAGTATTTGAAG AAAATACAGAACGCACCTAGACCTTCTGAGCATCGTTTATACCACGATGC CGCTTGGACGAGCAACATGTGCCCCTGGATATCGATAATGAAAACGTCAA GATTGTGGAATAAGGCCCCACCGTCGCCCATTGCTTTGGTGATTGGTGCT AAGCGGGATGAATACCCTGACTTGAACCAGGTTATGGCGCCCACTTTTTA GAACTCCCTTGATTTATCCGCGCCTGTACTGCCAGGAAACATTGCGGTAG ATTACCCACTGTTGCGGCAAATTTCAAGCATTTGCAACCAGCTTCCAACC ATGGGCGGCGAGCAGTTCTCGGAGGAGTTCATGCGGGTGAGTCCACCTTT GCCTTCGACCGAACATTGTTCGCGAAGAAACGGGACCACAGGTAGATCTA TTGCCTACCTGTACCAAAGAAATCGCAACTAACTGTAGCTGTAAACGACG AGAGACTTGAACACTCGTATTTAAAGTGCGCAGTTTGGCAAGGGATGTTG ACTCCCGCACTCGTGGCTGGACTTTCTCGCCTCCCTTACAGTACGGCACG AGCTGCCTACACGGCCTTAAAAATCTTAGCACCACATACTACGGTATTAA GTAGGCACCAGAAGAATCTACAGCAAGTAGCACGAATGAGCGCAGCTGCA TCTCGTTTTTTTATGAGAGTTGCCGTTTGTTCTCTCGCTACCTGCCCAGG AATTCAACGATTCTCTGTCAGTGACCTACCTCGCGTGCGTGCAGAAGAGT GCCGGTTCGCTCAACGACCTTGCTGACAAGTTCATGGTGGCCTACAGCCA CCGAAGAGCACTT
back to top

Coding sequence (CDS) from alignment at F-serratus_M_contig927:97278..101890+

>mRNA_F-serratus_M_contig927.20655.1 ID=mRNA_F-serratus_M_contig927.20655.1|Name=mRNA_F-serratus_M_contig927.20655.1|organism=Fucus serratus male|type=CDS|length=1026bp|location=Sequence derived from alignment at F-serratus_M_contig927:97278..101890+ (Fucus serratus male)
ATGGGAGGTGGGGCTCAAGAGGCAGGGGGGCGAGTCATCGGTCTCCTGTT
CGGCTCTCAGAACGGGCTCGACGTGAGCATATTCGACGCGATGGAGGTGG
CATGCACCGCATCGGGAAAGGACGGCGTGGAACTGAACGAGGGTCTGATC
GAGAAGCAAAGAGATCTCTATGGGAGGTGGGGCTCAAGAGGCAGGGGGGC
GAGTCATCGGTCTCCTGTTCGGCTCTCAGAACGGGCTCGACGTGAGCATA
TTCGACGCGATGGAGGTGGCATGCACCGCATCGGGAAAGGACGGCGTGGA
ACTGAACGAGGGTCTGATCGAGAAGCAAAGAGATCTCTACACTGCGGTTT
ACCCTATGTATGAGATTCTGGGATGGTACACGGTCGGCACGGAGGCCACG
GAGCTCGATCTACGCCTTCAACGACAGACACTGCGGTTTACCCTATGTAT
GAGATTCTGGGATGGTACACGGTCGGCACGGAGGCCACGGAGCTCGATCT
ACGCCTTCAACGACAGATGATGAAATTCAATCAGGCCCCGCTGTTCCTAC
TGATGAATCCTAACCCGGCGCAAGGCTCCAAAGAGCTTCCCGTGTTGATC
CATGAGTCGGAAGCGCACACGCTGGACGGGAGGTCCAAGCTGATTTTCGT
TCAGCTGGCATTCCAGGCGAGTTCACTGCTGTTGGAAGCTCACCGATTTT
CTCGCTGGAAATACCGTCGCGCCATCTTGGAAGTACGGTCTATTAATAGG
GTTGTTCCACCATCATGGTAGATGATGAAATTCAATCAGGCCCCGCTGTT
CCTACTGATGAATCCTAACCCGGCGCAAGGCTCCAAAGAGCTTCCCGTGT
TGATCCATGAGTCGGAAGCGCACACGCTGGACGGGAGGTCCAAGCTGATT
TTCGTTCAGCTGGCATTCCAGGCGAGTTCACTGCTGTTGGAAGCTCACCG
ATTTTCTCGCTGGAAATACCGTCGCGCCATCTTGGAAGTACGGTCTATTA
ATAGGGTTGTTCCACCATCATGGTAG
back to top