mRNA_F-serratus_M_contig923.20638.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig923.20638.1
Unique NamemRNA_F-serratus_M_contig923.20638.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
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BLAST of mRNA_F-serratus_M_contig923.20638.1 vs. uniprot
Match: A0A6H5KWT8_9PHAE (Ribosomal_S7 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KWT8_9PHAE)

HSP 1 Score: 389 bits (998), Expect = 6.770e-132
Identity = 204/236 (86.44%), Postives = 217/236 (91.95%), Query Frame = 1 
Query:   37 MATELNPEGWEGGND--APETMEETGWGGDAEDIDASLPVEEAVAVSEVKLFNKWTFDDIEIRDISLEDYIAVKGKYATFLPHTAGRYQKKRFRKATCPIVERLCVSLMRKGRNSGKKLMAARIVKHTLEIIHLLTDQNPVQVLVDAVINSGPREDSTRVGSAGVVRRQAVDLSPFRRVNQALYLITTGARESSFRNIKTIAECLADEIINAARGSSNSYAIKKKDEIERVAKANR 738
            MATELNP+GW+GG    A +     GWG    +++A L VEE+  +S+V+LFNKW+FDDIEIRDISLEDYIAVKGKYAT+LPHTAGRYQKKRFRKATCPIVERLC +LMRKGRNSGKKLMAARIVKHTLEIIHLLTDQNPVQVLVDAVINSGPREDSTRVGSAGVVRRQAVDLSPFRRVNQALYLITTGARESSFRNIKTIAECLADEIINAARGSSNSYAIKKKDEIERVAKANR
Sbjct:    1 MATELNPDGWDGGEPVVADDAGAAEGWG--EPEVEAPLAVEES-GISDVQLFNKWSFDDIEIRDISLEDYIAVKGKYATYLPHTAGRYQKKRFRKATCPIVERLCCALMRKGRNSGKKLMAARIVKHTLEIIHLLTDQNPVQVLVDAVINSGPREDSTRVGSAGVVRRQAVDLSPFRRVNQALYLITTGARESSFRNIKTIAECLADEIINAARGSSNSYAIKKKDEIERVAKANR 233
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BLAST of mRNA_F-serratus_M_contig923.20638.1 vs. uniprot
Match: A0A835ZGP4_9STRA (Ribosomal protein S7 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGP4_9STRA)

HSP 1 Score: 332 bits (852), Expect = 2.180e-110
Identity = 164/193 (84.97%), Postives = 184/193 (95.34%), Query Frame = 1 
Query:  160 VAVSEVKLFNKWTFDDIEIRDISLEDYIAVKGKYATFLPHTAGRYQKKRFRKATCPIVERLCVSLMRKGRNSGKKLMAARIVKHTLEIIHLLTDQNPVQVLVDAVINSGPREDSTRVGSAGVVRRQAVDLSPFRRVNQALYLITTGARESSFRNIKTIAECLADEIINAARGSSNSYAIKKKDEIERVAKANR 738
            ++ SE+KLFNKW++DDIEI DISL DY+AV  K+ATFLPHTAGRYQKKRFRKA CP++ERL VSLMRKGRNSGKKL+AAR+V+ T+EIIHLLTD+NP+Q LV+AVIN+GPREDSTRVGSAGVVRRQAVDLSPFRRVNQA+YL+TTGARESSFRNIKTIAECLADEIINA+RGSSNSYAIKKKDEIERVAKANR
Sbjct:    1 MSASEIKLFNKWSYDDIEIEDISLSDYLAVGTKHATFLPHTAGRYQKKRFRKAACPLIERLTVSLMRKGRNSGKKLLAARVVRSTMEIIHLLTDENPLQTLVNAVINAGPREDSTRVGSAGVVRRQAVDLSPFRRVNQAIYLLTTGARESSFRNIKTIAECLADEIINASRGSSNSYAIKKKDEIERVAKANR 193
[Close]
BLAST of mRNA_F-serratus_M_contig923.20638.1 vs. uniprot
Match: B8CC69_THAPS (RS5, ribosomal protein 5 n=10 Tax=Ochrophyta TaxID=2696291 RepID=B8CC69_THAPS)

HSP 1 Score: 328 bits (840), Expect = 3.420e-108
Identity = 167/216 (77.31%), Postives = 186/216 (86.11%), Query Frame = 1 
Query:  133 DASLPVEEAVAV--------------SEVKLFNKWTFDDIEIRDISLEDYIAVKGKYATFLPHTAGRYQKKRFRKATCPIVERLCVSLMRKGRNSGKKLMAARIVKHTLEIIHLLTDQNPVQVLVDAVINSGPREDSTRVGSAGVVRRQAVDLSPFRRVNQALYLITTGARESSFRNIKTIAECLADEIINAARGSSNSYAIKKKDEIERVAKANR 738
            D   P+EE V V              +EVKLF KW+FDDIEIRDISL DYIA KG +AT+LPHTAGRYQKKRFRKA+CPIVERL   LMRKGRNSGKKLMA RIV+HTLEIIHLLTDQNPVQV+VDA+INSGPREDSTRVG AGVVRRQAVD+SPFRRVN ALYL+ TGARE+SFRN+KT+AECLA+E++NAARGSSNSYAIKKKDEIERV+K+NR
Sbjct:    3 DVEDPIEEPVEVEXXXXXEFVAVGGATEVKLFGKWSFDDIEIRDISLVDYIACKGDHATYLPHTAGRYQKKRFRKASCPIVERLACCLMRKGRNSGKKLMAVRIVQHTLEIIHLLTDQNPVQVVVDAIINSGPREDSTRVGGAGVVRRQAVDMSPFRRVNYALYLLATGAREASFRNLKTVAECLAEELVNAARGSSNSYAIKKKDEIERVSKSNR 218
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BLAST of mRNA_F-serratus_M_contig923.20638.1 vs. uniprot
Match: D8TJL0_VOLCA (Component of cytosolic 80S ribosome and 40S small subunit n=2 Tax=Viridiplantae TaxID=33090 RepID=D8TJL0_VOLCA)

HSP 1 Score: 326 bits (836), Expect = 5.750e-108
Identity = 158/193 (81.87%), Postives = 180/193 (93.26%), Query Frame = 1 
Query:  160 VAVSEVKLFNKWTFDDIEIRDISLEDYIAVKGKYATFLPHTAGRYQKKRFRKATCPIVERLCVSLMRKGRNSGKKLMAARIVKHTLEIIHLLTDQNPVQVLVDAVINSGPREDSTRVGSAGVVRRQAVDLSPFRRVNQALYLITTGARESSFRNIKTIAECLADEIINAARGSSNSYAIKKKDEIERVAKANR 738
            +A  +VKLF KW+F+DIE++DISLEDYIAVK KYA ++PHTAGRYQKKRFRKA CPIVERLC SLM  GRN+GKKLMA RIVKH  +IIHLLTDQNP+QVLVDA+INSGPRED+TR+GSAGVVRRQAVD+SP RRVNQA+YL+TTGARE++FRNIKTIAECLADE++NAA+GSSNSYAIKKKDEIERVAKANR
Sbjct:    1 MATPDVKLFGKWSFEDIEVQDISLEDYIAVKTKYAVYVPHTAGRYQKKRFRKALCPIVERLCNSLMMHGRNNGKKLMAVRIVKHAFDIIHLLTDQNPIQVLVDAIINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADELVNAAKGSSNSYAIKKKDEIERVAKANR 193
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BLAST of mRNA_F-serratus_M_contig923.20638.1 vs. uniprot
Match: W7TXQ4_9STRA (Ribosomal protein S7, conserved site n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TXQ4_9STRA)

HSP 1 Score: 327 bits (837), Expect = 8.750e-108
Identity = 168/211 (79.62%), Postives = 189/211 (89.57%), Query Frame = 1 
Query:  127 DIDASLPVEEA-VAVS------EVKLFNKWTFDDIEIRDISLEDYIAVKGKYATFLPHTAGRYQKKRFRKATCPIVERLCVSLMRKGRNSGKKLMAARIVKHTLEIIHLLTDQNPVQVLVDAVINSGPREDSTRVGSAGVVRRQAVDLSPFRRVNQALYLITTGARESSFRNIKTIAECLADEIINAARGSSNSYAIKKKDEIERVAKANR 738
            +ID ++P E A +AV+      ++KLF KW+  D+EI+D+SLEDYI V GK AT+LPHTAGRYQKKRFRKA CP+VERL  SLMRKGRNSGKKL A RIVKHTLEIIHLLTDQNPVQV+VD++IN+GPREDSTRVGSAGVVRRQAVD+SPFRRVNQA+YLITTGARESSFRNIKTIAE LADEIINAA+GSSNSYAIKKKDE+ERVAKANR
Sbjct:    5 EIDETVPYEPADMAVAFEDNSADIKLFGKWSLSDVEIKDLSLEDYIGVNGKCATYLPHTAGRYQKKRFRKAQCPVVERLANSLMRKGRNSGKKLTANRIVKHTLEIIHLLTDQNPVQVVVDSIINAGPREDSTRVGSAGVVRRQAVDMSPFRRVNQAIYLITTGARESSFRNIKTIAETLADEIINAAKGSSNSYAIKKKDEVERVAKANR 215
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BLAST of mRNA_F-serratus_M_contig923.20638.1 vs. uniprot
Match: A0A7S3V821_9STRA (Hypothetical protein n=3 Tax=Bacillariophyta TaxID=2836 RepID=A0A7S3V821_9STRA)

HSP 1 Score: 324 bits (831), Expect = 9.340e-107
Identity = 160/215 (74.42%), Postives = 189/215 (87.91%), Query Frame = 1 
Query:   94 MEETGWGGDAEDIDASLPVEEAVAVSEVKLFNKWTFDDIEIRDISLEDYIAVKGKYATFLPHTAGRYQKKRFRKATCPIVERLCVSLMRKGRNSGKKLMAARIVKHTLEIIHLLTDQNPVQVLVDAVINSGPREDSTRVGSAGVVRRQAVDLSPFRRVNQALYLITTGARESSFRNIKTIAECLADEIINAARGSSNSYAIKKKDEIERVAKANR 738
            +EET +  + E+++           +E+KLF KW+FD+IE+RDISLEDYIA KG +AT+LPHTAGRYQ KRFRKA+CPIVERL   LM+KGRNSGKK+MA RIV+HTLEIIH+LTDQNP+Q++VDAVINSGPREDSTRVG AGVVRRQAVD+SPFRRVN ALYLI TGARE+SFRN+KT+AECLA+E+INAARGSSNSYAIKKKDEIERV+K+NR
Sbjct:    9 VEETTYDEEVEEVEEEPEFVGDAGGAEIKLFGKWSFDEIEVRDISLEDYIACKGDHATYLPHTAGRYQMKRFRKASCPIVERLACCLMKKGRNSGKKIMATRIVQHTLEIIHILTDQNPIQIVVDAVINSGPREDSTRVGGAGVVRRQAVDMSPFRRVNYALYLIATGAREASFRNLKTMAECLAEELINAARGSSNSYAIKKKDEIERVSKSNR 223
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BLAST of mRNA_F-serratus_M_contig923.20638.1 vs. uniprot
Match: A0A2K3DQA6_CHLRE (Ribosomal_S7 domain-containing protein n=9 Tax=CS clade TaxID=2812636 RepID=A0A2K3DQA6_CHLRE)

HSP 1 Score: 322 bits (826), Expect = 1.870e-106
Identity = 156/193 (80.83%), Postives = 179/193 (92.75%), Query Frame = 1 
Query:  160 VAVSEVKLFNKWTFDDIEIRDISLEDYIAVKGKYATFLPHTAGRYQKKRFRKATCPIVERLCVSLMRKGRNSGKKLMAARIVKHTLEIIHLLTDQNPVQVLVDAVINSGPREDSTRVGSAGVVRRQAVDLSPFRRVNQALYLITTGARESSFRNIKTIAECLADEIINAARGSSNSYAIKKKDEIERVAKANR 738
            +A  +VKLF KW+F+DIE+ DISLEDYIAVK KYA ++PHTAGRYQK+RFRKA CPIVERLC SLM  GRN+GKKLMA RIVKH  +IIHLLTDQNP+QV+VDA+INSGPRED+TR+GSAGVVRRQAVD+SP RRVNQA+YL+TTGARE++FRNIKTIAECLADE++NAA+GSSNSYAIKKKDEIERVAKANR
Sbjct:    1 MASPDVKLFGKWSFEDIEVTDISLEDYIAVKTKYAVYVPHTAGRYQKRRFRKALCPIVERLCNSLMMHGRNNGKKLMAVRIVKHAFDIIHLLTDQNPIQVVVDAIINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADELVNAAKGSSNSYAIKKKDEIERVAKANR 193
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BLAST of mRNA_F-serratus_M_contig923.20638.1 vs. uniprot
Match: A0A6V2ER46_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2ER46_9STRA)

HSP 1 Score: 324 bits (830), Expect = 1.870e-106
Identity = 161/196 (82.14%), Postives = 181/196 (92.35%), Query Frame = 1 
Query:  151 EEAVAVSEVKLFNKWTFDDIEIRDISLEDYIAVKGKYATFLPHTAGRYQKKRFRKATCPIVERLCVSLMRKGRNSGKKLMAARIVKHTLEIIHLLTDQNPVQVLVDAVINSGPREDSTRVGSAGVVRRQAVDLSPFRRVNQALYLITTGARESSFRNIKTIAECLADEIINAARGSSNSYAIKKKDEIERVAKANR 738
            E A A  EVKLF KW+FD+IE+RDISL DYIA KG +AT+LPHTAGRYQKKRFRKA+CPIVERL   LMRKGRN+GKKLMA RIV+HTLEIIHLLTDQNP+QV+VDA+INSGPREDSTRVG AGVVRRQAVD+SPFRRVN ALYL+ TGARE+SFRN+KT+AECLA+E+INAARGSSNSYAIKKKDEIERV+K+NR
Sbjct:   38 EVANAGPEVKLFGKWSFDEIEVRDISLVDYIACKGDHATYLPHTAGRYQKKRFRKASCPIVERLACCLMRKGRNAGKKLMAVRIVQHTLEIIHLLTDQNPIQVVVDAIINSGPREDSTRVGGAGVVRRQAVDMSPFRRVNYALYLLATGAREASFRNLKTMAECLAEELINAARGSSNSYAIKKKDEIERVSKSNR 233
[Close]
BLAST of mRNA_F-serratus_M_contig923.20638.1 vs. uniprot
Match: A0A7S4N0H9_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4N0H9_9STRA)

HSP 1 Score: 323 bits (829), Expect = 2.470e-106
Identity = 159/190 (83.68%), Postives = 177/190 (93.16%), Query Frame = 1 
Query:  169 SEVKLFNKWTFDDIEIRDISLEDYIAVKGKYATFLPHTAGRYQKKRFRKATCPIVERLCVSLMRKGRNSGKKLMAARIVKHTLEIIHLLTDQNPVQVLVDAVINSGPREDSTRVGSAGVVRRQAVDLSPFRRVNQALYLITTGARESSFRNIKTIAECLADEIINAARGSSNSYAIKKKDEIERVAKANR 738
            +EVKLF KW+FDD+E+RDISL DYIA  G +A FLPHTAGRYQKKRFRKA+CPIVERL   LM+KGRNSGKKLMA RIV+HTLEIIHLLTDQNP+QV+VDA+INSGPREDSTRVG AGVVRRQAVD+SPFRRVN ALYLI TGARE+SFRN+KT+AECLA+E+INAARGSSNSYAIKKKDEIERVAK+NR
Sbjct:   42 TEVKLFGKWSFDDVEVRDISLVDYIACTGDHAVFLPHTAGRYQKKRFRKASCPIVERLACCLMKKGRNSGKKLMACRIVQHTLEIIHLLTDQNPIQVVVDAIINSGPREDSTRVGGAGVVRRQAVDMSPFRRVNYALYLIATGAREASFRNLKTMAECLAEELINAARGSSNSYAIKKKDEIERVAKSNR 231
[Close]
BLAST of mRNA_F-serratus_M_contig923.20638.1 vs. uniprot
Match: F0XZC6_AURAN (Ribosomal_S7 domain-containing protein n=2 Tax=Pelagomonadales TaxID=54409 RepID=F0XZC6_AURAN)

HSP 1 Score: 322 bits (825), Expect = 2.840e-106
Identity = 157/190 (82.63%), Postives = 176/190 (92.63%), Query Frame = 1 
Query:  169 SEVKLFNKWTFDDIEIRDISLEDYIAVKGKYATFLPHTAGRYQKKRFRKATCPIVERLCVSLMRKGRNSGKKLMAARIVKHTLEIIHLLTDQNPVQVLVDAVINSGPREDSTRVGSAGVVRRQAVDLSPFRRVNQALYLITTGARESSFRNIKTIAECLADEIINAARGSSNSYAIKKKDEIERVAKANR 738
            SE+KLF KWT+DD+E+ DISLEDYIAVKGK++ +LPHTAGRYQKKRFRKA CPI ERL  +LMRKGRN+GKKL A RIV+ TLEI+HLLTDQNPVQVLV A++ SGPREDSTRVGSAGVVRRQAVD+SPFRRVN ALYL+ TGARE++FRN+KTIAECLADE+INAARGSSNSYAIKKKDEIERVAKANR
Sbjct:    6 SEIKLFGKWTYDDVEVNDISLEDYIAVKGKHSVYLPHTAGRYQKKRFRKALCPITERLVCALMRKGRNNGKKLKAVRIVQSTLEIVHLLTDQNPVQVLVQAILQSGPREDSTRVGSAGVVRRQAVDMSPFRRVNMALYLLCTGAREAAFRNVKTIAECLADEVINAARGSSNSYAIKKKDEIERVAKANR 195
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig923.20638.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KWT8_9PHAE6.770e-13286.44Ribosomal_S7 domain-containing protein n=2 Tax=Ect... [more]
A0A835ZGP4_9STRA2.180e-11084.97Ribosomal protein S7 domain-containing protein n=1... [more]
B8CC69_THAPS3.420e-10877.31RS5, ribosomal protein 5 n=10 Tax=Ochrophyta TaxID... [more]
D8TJL0_VOLCA5.750e-10881.87Component of cytosolic 80S ribosome and 40S small ... [more]
W7TXQ4_9STRA8.750e-10879.62Ribosomal protein S7, conserved site n=2 Tax=Monod... [more]
A0A7S3V821_9STRA9.340e-10774.42Hypothetical protein n=3 Tax=Bacillariophyta TaxID... [more]
A0A2K3DQA6_CHLRE1.870e-10680.83Ribosomal_S7 domain-containing protein n=9 Tax=CS ... [more]
A0A6V2ER46_9STRA1.870e-10682.14Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S4N0H9_9STRA2.470e-10683.68Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
F0XZC6_AURAN2.840e-10682.63Ribosomal_S7 domain-containing protein n=2 Tax=Pel... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig923contigF-serratus_M_contig923:312767..318399 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score391.0
Seed ortholog evalue4e-106
Seed eggNOG ortholog2880.D7G1X8
Preferred nameRPS5
KEGG koko:K02989,ko:K18914
KEGG Pathwayko03010,map03010
KEGG ModuleM00177
Hectar predicted targeting categoryother localisation
GOsGO:0000028,GO:0000184,GO:0000956,GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005730,GO:0005737,GO:0005773,GO:0005774,GO:0005829,GO:0005840,GO:0005844,GO:0005886,GO:0005911,GO:0006139,GO:0006401,GO:0006402,GO:0006403,GO:0006405,GO:0006407,GO:0006412,GO:0006413,GO:0006450,GO:0006518,GO:0006605,GO:0006611,GO:0006612,GO:0006613,GO:0006614,GO:0006725,GO:0006807,GO:0006810,GO:0006886,GO:0006913,GO:0006996,GO:0008104,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009506,GO:0009507,GO:0009536,GO:0009719,GO:0009725,GO:0009735,GO:0009892,GO:0009987,GO:0010033,GO:0010467,GO:0010468,GO:0010605,GO:0010629,GO:0015031,GO:0015833,GO:0015931,GO:0015935,GO:0016020,GO:0016043,GO:0016070,GO:0016071,GO:0019222,GO:0019439,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0030054,GO:0030312,GO:0030684,GO:0030686,GO:0031090,GO:0031503,GO:0031974,GO:0031981,GO:0032991,GO:0033036,GO:0033365,GO:0034613,GO:0034622,GO:0034641,GO:0034645,GO:0034655,GO:0042221,GO:0042254,GO:0042255,GO:0042274,GO:0042788,GO:0042886,GO:0043043,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044267,GO:0044270,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044428,GO:0044437,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0045047,GO:0045184,GO:0046483,GO:0046700,GO:0046907,GO:0048519,GO:0050657,GO:0050658,GO:0050789,GO:0050896,GO:0051029,GO:0051168,GO:0051169,GO:0051179,GO:0051234,GO:0051236,GO:0051641,GO:0051649,GO:0055044,GO:0060255,GO:0065003,GO:0065007,GO:0065008,GO:0070013,GO:0070727,GO:0070925,GO:0070972,GO:0071166,GO:0071426,GO:0071428,GO:0071702,GO:0071704,GO:0071705,GO:0071826,GO:0071840,GO:0071944,GO:0072594,GO:0072599,GO:0072657,GO:0090150,GO:0090304,GO:0097064,GO:0097159,GO:0098588,GO:0098805,GO:1901360,GO:1901361,GO:1901363,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1990904
EggNOG free text desc.rRNA binding
EggNOG OGsCOG0049@1,KOG3291@2759
EC1.18.1.6
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEbr01610,ko00000,ko00001,ko00002,ko01000,ko03011,ko03029
Exons5
Model size1354
Cds size705
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932673.357862-UTR-F-serratus_M_contig923:312766..3133791622932673.357862-UTR-F-serratus_M_contig923:312766..313379Fucus serratus maleUTRF-serratus_M_contig923 312767..313379 -
1690964415.8001041-UTR-F-serratus_M_contig923:312766..3133791690964415.8001041-UTR-F-serratus_M_contig923:312766..313379Fucus serratus maleUTRF-serratus_M_contig923 312767..313379 -
1622932673.481219-UTR-F-serratus_M_contig923:318363..3183991622932673.481219-UTR-F-serratus_M_contig923:318363..318399Fucus serratus maleUTRF-serratus_M_contig923 318364..318399 -
1690964415.8959734-UTR-F-serratus_M_contig923:318363..3183991690964415.8959734-UTR-F-serratus_M_contig923:318363..318399Fucus serratus maleUTRF-serratus_M_contig923 318364..318399 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932673.3781123-CDS-F-serratus_M_contig923:313379..3135471622932673.3781123-CDS-F-serratus_M_contig923:313379..313547Fucus serratus maleCDSF-serratus_M_contig923 313380..313547 -
1690964415.8138177-CDS-F-serratus_M_contig923:313379..3135471690964415.8138177-CDS-F-serratus_M_contig923:313379..313547Fucus serratus maleCDSF-serratus_M_contig923 313380..313547 -
1622932673.398017-CDS-F-serratus_M_contig923:314002..3141191622932673.398017-CDS-F-serratus_M_contig923:314002..314119Fucus serratus maleCDSF-serratus_M_contig923 314003..314119 -
1690964415.826836-CDS-F-serratus_M_contig923:314002..3141191690964415.826836-CDS-F-serratus_M_contig923:314002..314119Fucus serratus maleCDSF-serratus_M_contig923 314003..314119 -
1622932673.4196808-CDS-F-serratus_M_contig923:314717..3148521622932673.4196808-CDS-F-serratus_M_contig923:314717..314852Fucus serratus maleCDSF-serratus_M_contig923 314718..314852 -
1690964415.8447092-CDS-F-serratus_M_contig923:314717..3148521690964415.8447092-CDS-F-serratus_M_contig923:314717..314852Fucus serratus maleCDSF-serratus_M_contig923 314718..314852 -
1622932673.438919-CDS-F-serratus_M_contig923:315246..3153731622932673.438919-CDS-F-serratus_M_contig923:315246..315373Fucus serratus maleCDSF-serratus_M_contig923 315247..315373 -
1690964415.859766-CDS-F-serratus_M_contig923:315246..3153731690964415.859766-CDS-F-serratus_M_contig923:315246..315373Fucus serratus maleCDSF-serratus_M_contig923 315247..315373 -
1622932673.4618957-CDS-F-serratus_M_contig923:318205..3183631622932673.4618957-CDS-F-serratus_M_contig923:318205..318363Fucus serratus maleCDSF-serratus_M_contig923 318206..318363 -
1690964415.8742158-CDS-F-serratus_M_contig923:318205..3183631690964415.8742158-CDS-F-serratus_M_contig923:318205..318363Fucus serratus maleCDSF-serratus_M_contig923 318206..318363 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig923.20638.1prot_F-serratus_M_contig923.20638.1Fucus serratus malepolypeptideF-serratus_M_contig923 313380..318363 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig923.20638.1

>prot_F-serratus_M_contig923.20638.1 ID=prot_F-serratus_M_contig923.20638.1|Name=mRNA_F-serratus_M_contig923.20638.1|organism=Fucus serratus male|type=polypeptide|length=235bp
MATELNPEGWEGGNDAPETMEETGWGGDAEDIDASLPVEEAVAVSEVKLF
NKWTFDDIEIRDISLEDYIAVKGKYATFLPHTAGRYQKKRFRKATCPIVE
RLCVSLMRKGRNSGKKLMAARIVKHTLEIIHLLTDQNPVQVLVDAVINSG
PREDSTRVGSAGVVRRQAVDLSPFRRVNQALYLITTGARESSFRNIKTIA
ECLADEIINAARGSSNSYAIKKKDEIERVAKANR*
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mRNA from alignment at F-serratus_M_contig923:312767..318399-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig923.20638.1 ID=mRNA_F-serratus_M_contig923.20638.1|Name=mRNA_F-serratus_M_contig923.20638.1|organism=Fucus serratus male|type=mRNA|length=5633bp|location=Sequence derived from alignment at F-serratus_M_contig923:312767..318399- (Fucus serratus male)
CCCTCACCAAGCGTCCCGTGTCCTCGTGCTGGATCAATGGCGACCGAACT
GAACCCTGAGGGATGGGAAGGGGGAAATGATGCCCCAGAAACTATGGAAG
AAACTGGATGGGGAGGAGATGCGGAAGATATTGACGCTTCGCTCCCCGTG
GAGGAAGCTGTGGCGGTGTCCGAGGTGAAGCTCTTCAATAAGTGGTGAGC
AGCGAGGCGAGCTCGCGGGCAGCGAAGCAGGTCATGGCTGACGAGATCAT
CCAGGTCGCAATTATCATATAGGGCGTCGAGATGCCGTGCTGCCTGGGTT
TTCTATGTGTTGTCTCACGCGAGTGTGTACAGTTTGGTCTACGGCAGGCG
GAAAGTGCGGTCCCCCTTATTCTAGTCTAGCTTTAGATTTTACATTATTT
GAGGACGAGTAAAATTACTTAACATATTACCTAGGATTAGAACGCAGGAC
TATATAAAGAGAGATTGGAACGCCGGTCACCACACACGCCAGACAGCAGC
GCGTTGTCTGTGTACCCATCGATGAGAGAAAAACATTCAGACAACGAGCA
GTACTGCTGTTGTAGCAGTTGATAATGACTTCACAGATTTGCGGTCTCTG
TACCCACCCTTCTCCCACTTGAACGGATTGCGTGGAACCTGCCCGCGAGT
GCCGCTGAGCCGCTGACAGCGTCCATGCACCATACCAGTACACAATGTAA
ACTATACATACCAGTACATACTACTGCTGCATACTATAATTGTAATATTG
TTTGGTGCTTTAATGCCCCTTTTCGAGCGAATCGGAATGTACTACTTTTT
TAGACCTACTACTGTATTACCTTTAGGGCTGATAGAGCCCCGCGCTGTGA
CCGCCCGAATCGATGTTGAGCTTTCTGTACGCGCGATAGACTCAGTTTGG
CGGCGGGAAGGTGTCAGGAACTCCTCCACGCTGGTGTCCTTTTCCAGCGA
ATCTTTTTAGACCTACTGCTGTTGTAATACCGTTAGGGCTGATAGAGCAC
CGCGCTGTGACCGCCCCGAATCGATGTTGAGCTTTCTGTACGTGCGATAG
ACTCAGTTTGGCGATGTGGAGATGTCAGGAACTCCTCCACACTGGTGCTT
TTCACCTACGAAGCACGGTCACGATTCCCAGATTTTTACCTCCACAGACA
GCAGCAATCTACCAAGAGCAGCAGGATTCGTTATCGACGGTCAGTACCCA
CTCCCCTTCTCAAGCGTGTCGCCCGGCTTGCCTGATACCCTCCTAACTCA
TCTTCTTTTTCTAAGGATGTGCCGCTTGTGGCACTTTCACTCCATTCCAG
ACCACACCCCAGCGATGAAACAAAACAGCCTTTGATCCCACCTGAACGTT
TTGACATTTTTCCCCCTCCAACCGGGGGATGCTCAAAAGGTCTAGGTGCT
GTTCTGATTTTCTTTAAAAACCCGGCCAGGAGAGTGCTTGATTTTAGCTG
GCGCGTAGGTCGCCAACCACAACATGAAATGACCCAATGGTACTACCTTA
GGGGGACCCGTTTAAATGCCGTGAAGAGGTTTTGTATTTGCAGCCTTTGA
GCCGACCTGAACGTTTTGACATTTTTTCCCCCTGACTGGGGGATGCTCAG
AAGGTCTAGGTGCGTTCTGTATTTTCTTAAAAAAATAGAGCTACATTGTC
GTACGAGCACGAGTGCATGTGTTATTTTTTTTGCAGGGGTCCCTCGAATC
AAGGGGAGCTCGTCTCGCCTTTCTTTGGGAGAATCAATCGCGTACGGCAC
GAAGCCGACGGAAGTCTACGGCACTTTTTTTTTGTTCGTGGCCCCCTCCC
CAAAAAAGTCTGGGTGGGTAAGAGGGCCTGCTCCACTGGGTGCGGTCCAC
CTTACTTTCTCCTTCACAACAGTTCAAAAATAGTGAAGATTTACTTCCAC
TCACAGGCCGAATGATAAAAATCCCCTTTCCCCCCTCCACAATCCATAGT
AACTCCTTTCTTGTTGTATACTGGTACTAATAATACTGAACACTGCCAGT
ACTATTCATCGTACAGGAATATGTACCCTTTACACCCGCGAGGTGGCAAA
AAAGCGATGTAGTGAGGGTCGAAACACGTTCCGCCGGCGTGACAAATGCT
GTCTAGGTACTTGTACAATTAATACTCTAGACTCTAGACCCCCACCCTCC
CCGCCGGTGTGAACATGCACCAGCGCGAAGGTTTCCAAGATGATGGGGAA
ACATAACCTGGTGTGCCGACGTCGCCTGTCCCCTGAGCGAGATTTACTAC
TATCGTGGGAACGTGGCAAGTCATGGCCAACTGTGAAGTTGTGTTCGCTT
CCCCGCTTCTGCAATACACAATCTGTGGGACACCCACCCACCCGTGTTCT
CCAGGGTGGCCGTTAATCGTTTATTGAAATCGCCATCATACGGAATGGAA
TTTTCAACGGCAGTGTAGTACAGTACACAAATGTTTATCGCACTCACACC
CTTCATTTCTCGATATTTTTGCTGAAAAACTAGAGCCCTGAACCCAGGCC
AGGTTCCCTCCCTCCTCCCTCCTCCACACGATATACCCGTACACGCGAAA
AGTCCGCTCCGAAGAAAGCACCAAAATGACGTGCACGACCCCACTCAGCT
ATTTGTTTTATTTTTTCTCACTCCTTCTCTCTCTCTTTCTCTCCAGGCTC
TAGTCTCACCACTAGTTTAAGTCGAAGGTAGTACCCAAAGACGCCGCACA
GCTGTTTTGTGACTGTTCCATGATGTCATCCCGGAAAAGTCTTACCTGTA
GTCTAAGTAAATAGCGTTTTTGGTTTAGATTAGGACACAATCTCTAAATT
TTATATCTGCTTGAGTACACACACACTAGTATTTTTTTATTTATTTTTAT
TCAGAGTGTTGCCCGGATCACAAACGAATAGCACGATCGGTTCTTTTATA
TCTATCTTCCTCTCTTTTCCATGCGATTCAGATGCCGCAGCAAGCTCTTG
AGGCAGGCCTGAAAAAAAAAACTTGAAACTTACTTGGTGTGTGTTCGCAA
TCGCTAACCACGATATTATCACGCAGGACCTTTGACGACATCGAGATCCG
CGACATCTCTCTTGAGGACTACATCGCCGTCAAGGGCAAGTACGCCACCT
TCCTGCCCCACACGGCCGGCCGCTACCAGAAGAAACGCTTCCGCAAGGCC
ACGGTACGACGACCACTGCCATCGAATCATCGCTTTGTTCCCACTGTCAT
TTCGATTCAGTTCGCGTCGCGTGTTTTGTTTTTTATGGAGGGATTTCTTG
CAATTTGTAGCTATTTTAATAATATCATTATTAACCGAATATGAATCGTG
TGTTGGAACGTTGGTGCGCGATGGATATGTAACAAAGAGAGCACAAGGCG
CGTGAATAAAACGTTAGAATGCACTATTGGGTTCATATAAAACGTTAGAA
AATGTGCCAAGTCTTGTTTCATGCACCGTTTTTCCCAGCGTCGGGAAAAA
AGTAATCGGTCATTTTAATCGCTCTCCTCTCCTCGCACGTCTGCGTAACT
TTGCGCGGTATTCCGGCGTGGTGGATTCGGCGCGCGGACGACGCCAGTGC
CCCATCGTGGAGCGCCTGTGCGTGTCCCTCATGCGCAAGGGCCGCAACAG
CGGAAAGAAGCTCATGGCGGCACGGATTGTGAAGCACACTCTGGAGATCA
TCCACCTTCTTACGGACCAGAACCCCGTCCAGGTTGGTTTCCGCGTTGTA
AACAAAGCATGCGTGCAACGCGAATCGAAAGGGAGAGGCGATGCGGTGTC
GTCTTACGGGTTAAAGCACTTTTGCCACAAGTGGCGAGCGATTCTGATGT
GTTGGGGAAACAGCACAAACAAAATTCTTGAAAGGCTTTCTCATGACTCG
ACAAGAGCATTCAGAAACGTAACCTATGTGCCTAGTATCATACATCAAAT
GTCGTTAAGTTTTTGGGGGTAAGGACCACGCTCAAACGAGCGCAACAGTA
AGAAGGAAAGACGTCCACGCCTTCTGGATGCAGGAAGTCGTGGTGTTCGA
AGAGAAGTTGTTGCCGGATAGAGCAGGGGACAGTGGGAGGACAGGGTGGG
CACACACCAAATTTTGTGGCGATAAGTGTTATTTATACCAGGTAGCCTTG
GTTGGTACTGGCTCATTCCTTATCAGCAGTCTACACTGTCCGCCATTCGC
TGGGTTCACTCTTGAAGTTAATTTATCGCGATTTTCATGTGCTCCTCGTC
AACAGATCAACCCAGCCTACTACGGCCGTCTTCGTAGGTAATGACAATAC
AAACCACCATTGCATGCCCTGAACTCGCAGGTGCTCGTGGACGCGGTGAT
TAACTCGGGCCCCCGGGAGGACTCAACACGCGTGGGATCTGCCGGTGTGG
TACGGCGCCAGGCCGTCGACCTTTCGCCCTTCCGGCGCGTGAACCAGGTA
TGTTGTGTTGGTGTTGTGTTTGACATCATCTCATGTTATTTAAGAGCGGC
AGCATCGCGTCAGAGGGTGTGCCGTTTTCATCCCAATTTTCCCCGCATTT
GTTATACTTTAAAAAAAGCAGTGCAGCTTCCGTGTTTCTGATTAAAAGGA
GAGAGTGCTCTTCCTTGTAAAAAAAGCAACCGCGACAGCACACCACAATA
TTGCATCCTCTGCAGCTTTTCTATCATCCTACGTATGTACACTTCCCGAG
ACCCAAAGTCAATCACAGTATATTATTACGAAGGCGACTGTGTCTGTACC
TTTTTAAAGAAAATGTACCTTTTCTTCAATGGCATCCTTTTTTGTGTTCT
TCTGAACTTTGTTCGCTCCTCCCTTCGTCCCTCCCTCCCTCTCTCTCTTT
CTCCATGATTATCTCTCTTCCTCCATCATATTGTGGATGTGGATGGAGGC
AGGCTCTGTACCTCATCACCACCGGCGCCCGCGAGTCGTCGTTCCGCAAC
ATCAAGACCATCGCCGAGTGCCTAGCGGACGAAATCATTAACGCTGCCCG
TGGGTCGTCCAACTCCTACGCCATCAAGAAAAAGGACGAGATCGAGCGTG
TGGCCAAGGCTAACCGGTAGATGAGCCGCTATTACTGCTACACTCTGCCG
CGGCTTATTTCGCCCACGCGATGGCACGAGCCTCTCCTGTCGAGAAAATT
CTCGAGTGACTTGATGTCTCGAGGCCTGTCCGCGGTCGATGTAGCTCGTC
GATTGTGTTGGGTTCGGGCGTTTTGAGCCCGACTAATGAGTGTGGGGGAA
AGAGTTGCGGGTAAGGGGCTGGTGAGGATGAGTCTCGACTTGTTTTGCCA
CGATGATAAATGAGGACGAATGAGGATGAACTTGACATGCGATGATATGA
TTTATTCTTCCTGAAAGCTCTTCGCACACGACGGCGTGTGGGGCGTCTTG
CTCTCCCCCGCCACACCACCCAATGAACATTAGCGCGGTCAGCCTTGACA
AGGCATAAGGCATCTACTCTCGCTCGTCTGCATCTTGACGTTGCTACGCG
GGGTGTAATCCAAATGTTGTTATACGATATGGGCTCTCTCTGGCGCCCGC
TTGAACAAATCCTTTTATGCTAAGTCTTACCCTTACAAAACTCATGTATG
TACTACAAACGGTACCCTTCCTATCTCTTACTCATGCTGTCACAGATGCA
CATGTAGTGTGACTATAAGCACTACAAACGCTA
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Coding sequence (CDS) from alignment at F-serratus_M_contig923:312767..318399-

>mRNA_F-serratus_M_contig923.20638.1 ID=mRNA_F-serratus_M_contig923.20638.1|Name=mRNA_F-serratus_M_contig923.20638.1|organism=Fucus serratus male|type=CDS|length=1410bp|location=Sequence derived from alignment at F-serratus_M_contig923:312767..318399- (Fucus serratus male)
ATGGCGACCGAACTGAACCCTGAGGGATGGGAAGGGGGAAATGATGCCCC
AGAAACTATGGAAGAAACTGGATGGGGAGGAGATGCGGAAGATATTGACG
CTTCGCTCCCCGTGGAGGAAGCTGTGGCGGTGTCCGAGGTGAAGCTCTTC
AATAAGTGATGGCGACCGAACTGAACCCTGAGGGATGGGAAGGGGGAAAT
GATGCCCCAGAAACTATGGAAGAAACTGGATGGGGAGGAGATGCGGAAGA
TATTGACGCTTCGCTCCCCGTGGAGGAAGCTGTGGCGGTGTCCGAGGTGA
AGCTCTTCAATAAGTGGACCTTTGACGACATCGAGATCCGCGACATCTCT
CTTGAGGACTACATCGCCGTCAAGGGCAAGTACGCCACCTTCCTGCCCCA
CACGGCCGGCCGCTACCAGAAGAAACGCTTCCGCAAGGCCACGGACCTTT
GACGACATCGAGATCCGCGACATCTCTCTTGAGGACTACATCGCCGTCAA
GGGCAAGTACGCCACCTTCCTGCCCCACACGGCCGGCCGCTACCAGAAGA
AACGCTTCCGCAAGGCCACGTGCCCCATCGTGGAGCGCCTGTGCGTGTCC
CTCATGCGCAAGGGCCGCAACAGCGGAAAGAAGCTCATGGCGGCACGGAT
TGTGAAGCACACTCTGGAGATCATCCACCTTCTTACGGACCAGAACCCCG
TCCAGTGCCCCATCGTGGAGCGCCTGTGCGTGTCCCTCATGCGCAAGGGC
CGCAACAGCGGAAAGAAGCTCATGGCGGCACGGATTGTGAAGCACACTCT
GGAGATCATCCACCTTCTTACGGACCAGAACCCCGTCCAGGTGCTCGTGG
ACGCGGTGATTAACTCGGGCCCCCGGGAGGACTCAACACGCGTGGGATCT
GCCGGTGTGGTACGGCGCCAGGCCGTCGACCTTTCGCCCTTCCGGCGCGT
GAACCAGGTGCTCGTGGACGCGGTGATTAACTCGGGCCCCCGGGAGGACT
CAACACGCGTGGGATCTGCCGGTGTGGTACGGCGCCAGGCCGTCGACCTT
TCGCCCTTCCGGCGCGTGAACCAGGCTCTGTACCTCATCACCACCGGCGC
CCGCGAGTCGTCGTTCCGCAACATCAAGACCATCGCCGAGTGCCTAGCGG
ACGAAATCATTAACGCTGCCCGTGGGTCGTCCAACTCCTACGCCATCAAG
AAAAAGGACGAGATCGAGCGTGTGGCCAAGGCTAACCGGTAGGCTCTGTA
CCTCATCACCACCGGCGCCCGCGAGTCGTCGTTCCGCAACATCAAGACCA
TCGCCGAGTGCCTAGCGGACGAAATCATTAACGCTGCCCGTGGGTCGTCC
AACTCCTACGCCATCAAGAAAAAGGACGAGATCGAGCGTGTGGCCAAGGC
TAACCGGTAG
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