mRNA_F-serratus_M_contig921.20627.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig921.20627.1 vs. uniprot
Match: D7G4R6_ECTSI (Nitrite transporter NAR1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G4R6_ECTSI) HSP 1 Score: 159 bits (401), Expect = 7.220e-46 Identity = 77/90 (85.56%), Postives = 82/90 (91.11%), Query Frame = 1
Query: 1 VWMSAGANDAFGKFCAIFLPISAFVAMGLDHSVANMFLIPLGMGLGAGVSWSQFLYANLLPVTLGNIVGGAVAVCGLYAASFGSLFSKKK 270
VWMS A+DA GKF AIFLPISAFVA+GLDHSVANMFLIPLGM LGAGV+WSQFL ANLLPVTLGNIVGGAVAVCGLY+ +FGSLF KKK
Sbjct: 255 VWMSVSASDAAGKFFAIFLPISAFVALGLDHSVANMFLIPLGMALGAGVTWSQFLLANLLPVTLGNIVGGAVAVCGLYSGAFGSLFGKKK 344
BLAST of mRNA_F-serratus_M_contig921.20627.1 vs. uniprot
Match: K0TJP3_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TJP3_THAOC) HSP 1 Score: 114 bits (284), Expect = 2.950e-30 Identity = 57/89 (64.04%), Postives = 67/89 (75.28%), Query Frame = 1
Query: 1 VWMSAGANDAFGKFCAIFLPISAFVAMGLDHSVANMFLIPLGMGLGAGVSWSQFLYANLLPVTLGNIVGGAVAVCGLYAASFGSLFSKK 267
V+M++G GK A++ PISAFVAMG DHSVANMF+IPLGM GA VS S FL NLLPVTLGNIVGGA+ V GLY ++FG+ KK
Sbjct: 74 VYMASGCASLIGKMVAVWFPISAFVAMGFDHSVANMFIIPLGMLRGADVSVSDFLLKNLLPVTLGNIVGGALCVMGLYGSTFGNWGKKK 162
BLAST of mRNA_F-serratus_M_contig921.20627.1 vs. uniprot
Match: A0A835YP49_9STRA (Nitrite transporter NAR1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YP49_9STRA) HSP 1 Score: 117 bits (292), Expect = 9.420e-30 Identity = 56/84 (66.67%), Postives = 68/84 (80.95%), Query Frame = 1
Query: 1 VWMSAGANDAFGKFCAIFLPISAFVAMGLDHSVANMFLIPLGMGLGAGVSWSQFLYANLLPVTLGNIVGGAVAVCGLYAASFGS 252
V+MSAGA+DA GK AIFLPISAFVA+G DH VANMFL+P M +GA + +FL+ +LLPVTLGNIVGGA AV G+Y+ +FGS
Sbjct: 242 VYMSAGASDAGGKLAAIFLPISAFVALGTDHCVANMFLLPAAMMVGADIGLGRFLFGHLLPVTLGNIVGGAAAVAGMYSLAFGS 325
BLAST of mRNA_F-serratus_M_contig921.20627.1 vs. uniprot
Match: A0A7S1BVI6_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BVI6_9STRA) HSP 1 Score: 110 bits (275), Expect = 1.100e-29 Identity = 54/90 (60.00%), Postives = 68/90 (75.56%), Query Frame = 1
Query: 1 VWMSAGANDAFGKFCAIFLPISAFVAMGLDHSVANMFLIPLGMGLGAGVSWSQFLYANLLPVTLGNIVGGAVAVCGLYAASFGSLFSKKK 270
V+M++G GK A++ PISAFVA+GL+HSVANMF+IPLG+ GA VS FL NLLPVTLGNIVGGA+ V GLY ++FG+ F K+
Sbjct: 10 VYMASGCASLAGKMVAVWFPISAFVALGLEHSVANMFIIPLGIMRGANVSAMDFLTKNLLPVTLGNIVGGALCVMGLYGSAFGNWFKPKE 99
BLAST of mRNA_F-serratus_M_contig921.20627.1 vs. uniprot
Match: I0YIS8_COCSC (Formate/nitrite transporter (Fragment) n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0YIS8_COCSC) HSP 1 Score: 111 bits (278), Expect = 1.970e-28 Identity = 53/85 (62.35%), Postives = 68/85 (80.00%), Query Frame = 1
Query: 1 VWMSAGANDAFGKFCAIFLPISAFVAMGLDHSVANMFLIPLGMGLGAGVSWSQFLYANLLPVTLGNIVGGAVAVCGLYAASFGSL 255
V+M+ A+ A GK A++ PISAFVA+GL+HSVANMF++PLG+ LGA VS++ FL ANLLPVTLGNIVGGAV + +YA FG +
Sbjct: 159 VYMANAASSAPGKVVAVWFPISAFVALGLEHSVANMFMVPLGIALGAKVSFATFLTANLLPVTLGNIVGGAVCIAAVYAVCFGKM 243
BLAST of mRNA_F-serratus_M_contig921.20627.1 vs. uniprot
Match: A0A061RZ79_9CHLO (Formate nitrite transporter n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061RZ79_9CHLO) HSP 1 Score: 113 bits (283), Expect = 2.310e-28 Identity = 58/88 (65.91%), Postives = 65/88 (73.86%), Query Frame = 1
Query: 1 VWMSAGANDAFGKFCAIFLPISAFVAMGLDHSVANMFLIPLGMGLGAGVSWSQFLYANLLPVTLGNIVGGAVAVCGLYAASFGSLFSK 264
VW + AN GK ++ PISAFVAMGL+HSVANMFLIP+GM LGA VS SQFL ANL+PVTLGNIVGGA+ V YA FG L K
Sbjct: 257 VWQATAANSLSGKAIGVWFPISAFVAMGLEHSVANMFLIPMGMALGAPVSISQFLTANLIPVTLGNIVGGAIFVGTAYAYIFGRLGKK 344
BLAST of mRNA_F-serratus_M_contig921.20627.1 vs. uniprot
Match: S0F3U1_CHOCR (Nitrite transporter NAR1 (Fragment) n=1 Tax=Chondrus crispus TaxID=2769 RepID=S0F3U1_CHOCR) HSP 1 Score: 109 bits (272), Expect = 2.050e-27 Identity = 52/83 (62.65%), Postives = 61/83 (73.49%), Query Frame = 1
Query: 1 VWMSAGANDAFGKFCAIFLPISAFVAMGLDHSVANMFLIPLGMGLGAGVSWSQFLYANLLPVTLGNIVGGAVAVCGLYAASFG 249
V++S A+ KF A+FLP+SAFV MGLDHSVANMFL+P+GM LGA V W FL ANL PVTLGNIVGG V G+Y +G
Sbjct: 177 VYLSNAASGFGSKFLAVFLPVSAFVTMGLDHSVANMFLVPMGMALGADVGWKTFLMANLWPVTLGNIVGGMGMVAGMYYLCYG 259
BLAST of mRNA_F-serratus_M_contig921.20627.1 vs. uniprot
Match: A0A8J9ST54_9CHLO (Probable formate transporter 1 n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9ST54_9CHLO) HSP 1 Score: 110 bits (275), Expect = 2.920e-27 Identity = 54/85 (63.53%), Postives = 68/85 (80.00%), Query Frame = 1
Query: 1 VWMSAGANDAFGKFCAIFLPISAFVAMGLDHSVANMFLIPLGMGLGAGVSWSQFLYANLLPVTLGNIVGGAVAVCGLYAASFGSL 255
V+M+ A+ A GK A++ PISAFVA+GL+HSVANMF++PLG+ LGA VS++ FL ANLLPVTLGNIVGGAV + YAA FG +
Sbjct: 245 VYMANAASSAPGKAVAVWFPISAFVALGLEHSVANMFMVPLGIALGAKVSFATFLTANLLPVTLGNIVGGAVCIALAYAACFGKM 329
BLAST of mRNA_F-serratus_M_contig921.20627.1 vs. uniprot
Match: B8BXN4_THAPS (Formate/nitrite transporter family member n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BXN4_THAPS) HSP 1 Score: 108 bits (271), Expect = 3.560e-27 Identity = 51/89 (57.30%), Postives = 66/89 (74.16%), Query Frame = 1
Query: 1 VWMSAGANDAFGKFCAIFLPISAFVAMGLDHSVANMFLIPLGMGLGAGVSWSQFLYANLLPVTLGNIVGGAVAVCGLYAASFGSLFSKK 267
V+M++G GK A++ PISAFVA+GLDHSVANMF+IPLGM GA ++ F+ NL+PVTLGNIVGGA+ V G+Y ++FG F K
Sbjct: 181 VYMASGCASLAGKMVAVWFPISAFVALGLDHSVANMFIIPLGMMRGAQITVGDFITKNLIPVTLGNIVGGALCVMGIYGSAFGKWFKSK 269
BLAST of mRNA_F-serratus_M_contig921.20627.1 vs. uniprot
Match: A0A7S0GAY3_9STRA (Hypothetical protein n=2 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GAY3_9STRA) HSP 1 Score: 109 bits (272), Expect = 5.340e-27 Identity = 54/90 (60.00%), Postives = 66/90 (73.33%), Query Frame = 1
Query: 1 VWMSAGANDAFGKFCAIFLPISAFVAMGLDHSVANMFLIPLGMGLGAGVSWSQFLYANLLPVTLGNIVGGAVAVCGLYAASFGSLFSKKK 270
V M++G + GK A++ PISAFVA+GLDHSVANMFLIPLGM GA ++ + NL+PVTLGNIVGGAV V Y +FGS FSKK+
Sbjct: 221 VLMASGCSSMIGKMTAVWFPISAFVALGLDHSVANMFLIPLGMMRGAEITIADMFIKNLIPVTLGNIVGGAVCVMAPYGKTFGSWFSKKE 310 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig921.20627.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig921.20627.1 >prot_F-serratus_M_contig921.20627.1 ID=prot_F-serratus_M_contig921.20627.1|Name=mRNA_F-serratus_M_contig921.20627.1|organism=Fucus serratus male|type=polypeptide|length=89bp MSAGANDAFGKFCAIFLPISAFVAMGLDHSVANMFLIPLGMGLGAGVSWSback to top mRNA from alignment at F-serratus_M_contig921:212066..213201- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig921.20627.1 ID=mRNA_F-serratus_M_contig921.20627.1|Name=mRNA_F-serratus_M_contig921.20627.1|organism=Fucus serratus male|type=mRNA|length=1136bp|location=Sequence derived from alignment at F-serratus_M_contig921:212066..213201- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig921:212066..213201- >mRNA_F-serratus_M_contig921.20627.1 ID=mRNA_F-serratus_M_contig921.20627.1|Name=mRNA_F-serratus_M_contig921.20627.1|organism=Fucus serratus male|type=CDS|length=534bp|location=Sequence derived from alignment at F-serratus_M_contig921:212066..213201- (Fucus serratus male)back to top |