mRNA_F-serratus_M_contig92.20607.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig92.20607.1 vs. uniprot
Match: D8LTK2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTK2_ECTSI) HSP 1 Score: 331 bits (848), Expect = 1.910e-98 Identity = 218/472 (46.19%), Postives = 294/472 (62.29%), Query Frame = 1
Query: 1627 PQSPVVIAARAVSHDESVRSTLCMQRAAKAVAIEDERM-----HLDTLGFEKVVSRSFLLPVRKSTKLPYAWELWKSMDTGLASAMQKEDKKWRQKLKASAPHQHAELERDQALELTREVLRIKHAEKAQERNARGQPTGRRRRRSPPRKPRKSKPSQDCHNYVARPIKDSVARSCGLSSTQLVLLRTSRELAEADNTQRKPDRQRTDRLAQPKAKRPATRIRDPATESLVKELTQCMNDKDKRAFLYACLADVKECTYSPNSRSSA---QYKEGG---NKRGDAENKKEQGEK----EAFLYRVDAREKARNAAMEYRRGELMYNATLDKRVCPSCDIEQSYDEVQEGRKXXXXXXXXYRRPMTWAGVRKDFFKRMDTFEKSRRAFIEGAAK-RQEKEVRSENSDYDLKKEERLYWEDIEGDFISRLQEDTARRQASQETRLATIAGEEYTFQPKLSTASDRFMRDSAWTG 2994
P SPV +AAR +S +ESVRSTL M+RAA+A+A+ED R+ H + + + K D + +K +K + L+A A + AE++RD+ALELT EVLR KHA+K + + +R SPP RKSK D +AR +KDS ARSCGLS Q++LLR SR+L + R +RT++LAQPK RPATR R+ ATE+LV+ELT+ M DK+KRAFL+ACLAD KECT+ P +RS+A ++++GG G E K+ +AFLYR+ A+E+A+NAAME+RRGEL Y A LDKRVCP C EQSYDEV+E RK X YR+P TWA VRKDF R++ F++S+R ++ A + R + YD + ERL+WEDIE DF+ RLQED ARRQ S E+R A + +++TF+P LS AS+R + +SAW G
Sbjct: 45 PGSPVAVAARVISQEESVRSTLRMKRAAEAIALEDARILAEVKHQEXXXXXXXXXXXXXXXXXXXXXXXHGDDPAKEED----ARARKAEKMRVRALRALAAREEAEIDRDRALELTLEVLRRKHADKRRGVSTIPSAPAYKRAHSPP---RKSKRPDDHRTTLARRVKDSAARSCGLSQAQVLLLRRSRKLGREGDAPRTVSERRTEQLAQPKEHRPATRTRNSATEALVEELTKTMTDKEKRAFLHACLADAKECTHRPYTRSAAAAARHRKGGAGDGATGGGEEAKDGSGPGASIDAFLYRMGAQERAKNAAMEHRRGELAYKAVLDKRVCPGCGAEQSYDEVEEKRKICXNCEAEYRKPKTWASVRKDFLNRVEAFQESKREAVQAATQSRMRTFALGSHRSYDGAERERLFWEDIEDDFVYRLQEDAARRQESLESRSAALY-QDWTFRPTLSAASERVVDESAWAG 508
BLAST of mRNA_F-serratus_M_contig92.20607.1 vs. uniprot
Match: A0A6H5JHI1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHI1_9PHAE) HSP 1 Score: 276 bits (705), Expect = 1.010e-77 Identity = 217/535 (40.56%), Postives = 286/535 (53.46%), Query Frame = 1
Query: 1627 PQSPVVIAARAVSHDESVRSTLCMQRAAKAVAIEDERMHLD------------------------TLGFEKVVSRSFLLPVRKSTKLPYAWELWKSMDTGLASAMQKEDKKWRQK-LKASAPHQHAELERDQALELTREVLRIKHAEKAQERNARGQPTGRRRRRSPPRKPRKSKPSQDCHNY-VARPIKDSVARSCGLSSTQLVLLRTSRELAEADNTQRKPDRQRTDRLAQPKAKRPATRIR-------------------------------------------DPATESLVKELTQCMNDKDKRAFLYACLADVKECTYSPNSRSSA---QYKEGG---NKRGDAENKKEQGEK----EAFLYRVDAREKARNAAMEYRRGELMYNATLDKRVCPSCDIEQSYDEVQEGRKXXXXXXXXYRRPMTWAGVRKDFFKRMDTFEKSRRAFIEGAAKRQEKEVRSENSDYDLKKEERLYWEDIEGDFISRLQEDTARRQASQETRLATIAGEEYTFQPKLSTASDRFMRDSAWTG 2994
P SP+ +AAR +S +ESVRSTL M+RAA+A+A+ED R+ + T R LP S T +K+ +K R + L+ A + AE+++D+AL LT EVLR KHA+K + + G +R SPPRK R+ D H +AR +KDS AR CGLS Q++LLR SR+L + R +RT++LAQPK RPATR R +PAT++LV+ELT+ M DK+KRAFL+ACLAD KECT+ P +RS+A +++ GG G E K+ +AFLYR+DA+E+A+NAAME+RRGEL Y A LDKRVCP C EQSYDEV+E RK XXXX YR+P TWA VRK R F G+ + YD + ERL+WEDIE DF RLQ D ARRQAS E+R A + +++TF+P LS AS+R + +SAW G
Sbjct: 42 PGSPIAVAARVISQEESVRSTLRMKRAAEAIALEDARILAEVKRQEXXXXXXXXXXXXXXXXXXRTXXXXXXXXXXXXEDARARGSLP---SNPMSCCTLCPCMTKKQAEKMRVRALRVLAAREEAEIDQDRALALTLEVLRRKHADKRRGVSTLPSVPGNKRAHSPPRKSRRP----DNHRTTLARRVKDSAARLCGLSQAQVLLLRRSRKLGREGDAPRTVSERRTEQLAQPKEHRPATRTRCGRVMTLVSSSNTSVAALAAREVQMKTRWYLVVRRQLASKVSRNPATDALVEELTKTMTDKEKRAFLHACLADAKECTHRPYTRSAAAVARHRRGGAGDGATGGGEEAKDGSGPGASIDAFLYRMDAQERAKNAAMEHRRGELAYKAVLDKRVCPDCGAEQSYDEVEEKRKIXXXXEAEYRKPKTWASVRKI------------RTFALGS-----------HRSYDGAEGERLFWEDIEDDFFCRLQHDAARRQASLESRSAALY-QDWTFRPTLSAASERVVDESAWAG 545
BLAST of mRNA_F-serratus_M_contig92.20607.1 vs. uniprot
Match: W4GNP8_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GNP8_9STRA) HSP 1 Score: 80.9 bits (198), Expect = 6.730e-12 Identity = 75/246 (30.49%), Postives = 123/246 (50.00%), Query Frame = 1
Query: 2257 KRPATRIRD-PATESLVKELTQCMNDKDKRAF-LYACLADVKECTYSPN-SRSSAQYKEGGNKRGDAENKKEQGEKEAFLYRVDAREKARNAAMEYRRGELMYNATLDKRVCPSCDIEQSYDEVQEGRKXXXXXXXXYRRPMTWAGVRKDFFKRMDTFEKSRRAFIEGAAKRQEKEVRSENSDYDLKKEER------LYWEDIEGDFISRLQEDTARRQASQETRLATIAGEEYTFQPKLSTASDR 2967
K P R RD A + + + + K++R YA +D + C + P R SA+ + D +N K+ + F+ R++A EKA+ ++ +R E +Y A LDK+ CP C QSY EVQ+ RKXXXXX YR + W + +FF+R+D E+ R +E + + R + K+ R L WE++E DF++R+Q D R +++ G +T+ P ++ + R
Sbjct: 322 KSPNNRQRDNQAHMEYINRIAKPVKPKNRRGKEQYARESDRRHCKFKPRVGRGSAESGRRSDGDDDDDNAKDN---QDFIRRMEAAEKAKLDGIQRQRAERVYLAKLDKKECPKCGNPQSYSEVQQKRKXXXXXGVTYRSRLAWGDISSEFFERVDLSEEQRVRHLEQLSADRTPCFRVSDKRVFDKRHNRMVRAKPLTWEEVELDFLTRVQLDATNRITNRQELEQKFYGS-FTYHPHITALAKR 563
BLAST of mRNA_F-serratus_M_contig92.20607.1 vs. uniprot
Match: T0R1Q3_SAPDV (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=T0R1Q3_SAPDV) HSP 1 Score: 78.2 bits (191), Expect = 4.380e-11 Identity = 65/185 (35.14%), Postives = 89/185 (48.11%), Query Frame = 1
Query: 2353 YACLADVKECTYSPNSRSSAQYKEGGNKRGDAENKKEQGEKEAFLYRVDAREKARNAAMEYRRGELMYNATLDKRVCPSCDIEQSYDEVQEGRKXXXXXXXXYRRPMTWAGVRKDFFKRMDTFEK---SRRAFIEGAAKR-----QEKEVRSENSDYDLKKEERLYWEDIEGDFISRLQEDTARR 2883
YA D K C + P + ++ GG D E + + F+ R++A EKA+N ++ R E Y A LDK+ CP C QSY EV++ RKXXXXX YR M W V DFF R+ FE SRR + A + K + ++ L W D+E DF+ R+Q D R
Sbjct: 333 YAREDDRKHCRFKPRLGRGS-HESGGRSDDDDET-----DNQDFIRRMEAAEKAKNESIRRNREEREYIAQLDKKECPKCGNLQSYSEVKQKRKXXXXXGVAYRSRMAWGDVESDFFTRVSDFESHKASRRQQVAAATTPVFRVLERKVLDPHTHTITTQRLRPLTWNDVEADFLGRVQLDEMNR 511
BLAST of mRNA_F-serratus_M_contig92.20607.1 vs. uniprot
Match: A0A7S1GBD2_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1GBD2_9STRA) HSP 1 Score: 66.2 bits (160), Expect = 1.730e-7 Identity = 54/173 (31.21%), Postives = 85/173 (49.13%), Query Frame = 1
Query: 2482 FLYRVDAREKARNAAMEYRRGELMYNATLDKRVCPSCDIEQSYDEVQEGRKXXXXXXXX---YRRPMTWAGVRKDFFKRMDTFEKSRRAFIEGAAKRQEKEVRSENS---DYDLKKEERLY-----WEDIEGDFISRLQEDTARRQASQETRLAT--IAGE----EYTFQPKL 2949
FL R++++E+AR + +E+ GE YNA D++VCP C Q+Y E + K +R + W V+ DF R++ + + A +E A K+ + R D K + + W ++ DF+ R ++D ARRQ + RL T +A E TFQPKL
Sbjct: 199 FLIRMESKEQARRSGIEHAVGEKAYNARHDRKVCPDCGQYQTYSEWKANIKRCQNERCSGRLFRPRLAWGDVQTDFLTRLNETQAQKEAKLEEAMKKSTPQFRMAKKVVFDPATGKPKEVATKPKNWAEVRADFLKRNEDDLARRQENMR-RLNTEGLASNPMYAECTFQPKL 370
BLAST of mRNA_F-serratus_M_contig92.20607.1 vs. uniprot
Match: D7G9I9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9I9_ECTSI) HSP 1 Score: 53.5 bits (127), Expect = 2.940e-5 Identity = 24/35 (68.57%), Postives = 25/35 (71.43%), Query Frame = 1
Query: 2515 RNAAMEYRRGELMYNATLDKRVCPSCDIEQSYDEV 2619
RNA ME+ RGEL A LDKRVCP C EQSYDE
Sbjct: 12 RNAGMEHHRGELADKAVLDKRVCPGCGAEQSYDEA 46 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig92.20607.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 6
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig92.20607.1 >prot_F-serratus_M_contig92.20607.1 ID=prot_F-serratus_M_contig92.20607.1|Name=mRNA_F-serratus_M_contig92.20607.1|organism=Fucus serratus male|type=polypeptide|length=1012bp MPGSLNYSPSESEGGRSRTGQVDLDKGLVGIDFTATPGTTPVKWRNGSGKback to top mRNA from alignment at F-serratus_M_contig92:842137..854363+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig92.20607.1 ID=mRNA_F-serratus_M_contig92.20607.1|Name=mRNA_F-serratus_M_contig92.20607.1|organism=Fucus serratus male|type=mRNA|length=12227bp|location=Sequence derived from alignment at F-serratus_M_contig92:842137..854363+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig92:842137..854363+ >mRNA_F-serratus_M_contig92.20607.1 ID=mRNA_F-serratus_M_contig92.20607.1|Name=mRNA_F-serratus_M_contig92.20607.1|organism=Fucus serratus male|type=CDS|length=6072bp|location=Sequence derived from alignment at F-serratus_M_contig92:842137..854363+ (Fucus serratus male)back to top |