mRNA_F-serratus_M_contig903.20457.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig903.20457.1 vs. uniprot
Match: A0A6H5K9K6_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9K6_9PHAE) HSP 1 Score: 167 bits (423), Expect = 8.920e-45 Identity = 91/156 (58.33%), Postives = 113/156 (72.44%), Query Frame = 2
Query: 11 IPVFADANYAKKVDNLRSMSGVAVTVGKSYVSWFSSTQKIVTLSTTEAEYVALEDGVKEALFVKEVLSFIILYISEKCIKVFVDNDGAISPANNPLSSETTKHIDVRFHFVRELTRSKTISVEYVPTKEQRADILTKALMGAIFKEHRNFLMNLHG 478
+ V+ DA+YA + RS++G+AVTVG + VS S TQ+IV+LST+EAEY+A +GVKEALFV+ VLSFI S IKV DN GAIS NP SS +KHIDVRFHF+REL +S ISVEY+PT EQ AD+LTKAL ++HRN LMN+ G
Sbjct: 216 LEVYVDASYADRDTGRRSVTGIAVTVGGTVVSHASKTQRIVSLSTSEAEYIAAGEGVKEALFVRAVLSFIAPETSGAKIKVLEDNQGAISLVQNPFSSARSKHIDVRFHFIRELFKSGRISVEYIPTDEQHADLLTKALGRTKLEDHRNALMNIPG 371
BLAST of mRNA_F-serratus_M_contig903.20457.1 vs. uniprot
Match: A0A6H5JUW6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUW6_9PHAE) HSP 1 Score: 160 bits (406), Expect = 4.080e-44 Identity = 85/151 (56.29%), Postives = 107/151 (70.86%), Query Frame = 2
Query: 20 FADANYAKKVDNLRSMSGVAVTVGKSYVSWFSSTQKIVTLSTTEAEYVALEDGVKEALFVKEVLSFIILYISEKCIKVFVDNDGAISPANNPLSSETTKHIDVRFHFVRELTRSKTISVEYVPTKEQRADILTKALMGAIFKEHRNFLMNL 472
+ADA++A K + RS+SG VT G VSWFS TQK VTLSTTEAEYVAL D VKE LF++++ F++ + CI VF DN GAI A NP+S+ +KHIDVR HF+REL K ISV +VP+ QRAD LTK+L F+ HR+F+MNL
Sbjct: 60 YADADFASKAADRRSVSGGIVTCGGGAVSWFSRTQKCVTLSTTEAEYVALGDVVKEILFLRQIWRFMLPQVGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFLRELVERKEISVIHVPSPYQRADFLTKSLPKDAFESHRDFVMNL 210
BLAST of mRNA_F-serratus_M_contig903.20457.1 vs. uniprot
Match: A0A6H5KIJ7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIJ7_9PHAE) HSP 1 Score: 161 bits (407), Expect = 4.640e-44 Identity = 84/151 (55.63%), Postives = 106/151 (70.20%), Query Frame = 2
Query: 20 FADANYAKKVDNLRSMSGVAVTVGKSYVSWFSSTQKIVTLSTTEAEYVALEDGVKEALFVKEVLSFIILYISEKCIKVFVDNDGAISPANNPLSSETTKHIDVRFHFVRELTRSKTISVEYVPTKEQRADILTKALMGAIFKEHRNFLMNL 472
+ADA++A K N RS+SG VT G VSWFS TQK VTLSTTEAEYVAL D VKE +F++++ F++ + CI +F DN GAI A NP+S+ +KHIDVR HF+REL K ISV +VP+ QRAD LTK+L F+ HR F+MNL
Sbjct: 76 YADADFASKAANRRSVSGGIVTCGGGSVSWFSRTQKCVTLSTTEAEYVALGDVVKEIIFLRQIWRFMLPQVGMPCIPIFEDNQGAIQLAQNPISNSNSKHIDVRHHFLRELVERKEISVIHVPSPYQRADFLTKSLSKDSFESHREFVMNL 226
BLAST of mRNA_F-serratus_M_contig903.20457.1 vs. uniprot
Match: A0A6H5JWJ4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWJ4_9PHAE) HSP 1 Score: 161 bits (407), Expect = 1.060e-43 Identity = 85/151 (56.29%), Postives = 107/151 (70.86%), Query Frame = 2
Query: 20 FADANYAKKVDNLRSMSGVAVTVGKSYVSWFSSTQKIVTLSTTEAEYVALEDGVKEALFVKEVLSFIILYISEKCIKVFVDNDGAISPANNPLSSETTKHIDVRFHFVRELTRSKTISVEYVPTKEQRADILTKALMGAIFKEHRNFLMNL 472
+ADA++A K + RS+SG VT G VSWFS TQK VTLSTTEAEYVAL D VKE LF++++ F++ + CI VF DN GAI A NP+S+ +KHIDVR HF+REL K ISV +VP+ QRAD LTK+L F+ HR+F+MNL
Sbjct: 105 YADADFASKAADRRSVSGGIVTCGGGAVSWFSRTQKCVTLSTTEAEYVALGDVVKEILFLRQIWRFMLPQVGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFLRELVERKEISVIHVPSPYQRADFLTKSLSKDAFESHRDFVMNL 255
BLAST of mRNA_F-serratus_M_contig903.20457.1 vs. uniprot
Match: A0A6H5KEZ8_9PHAE (Uncharacterized protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEZ8_9PHAE) HSP 1 Score: 158 bits (399), Expect = 5.150e-43 Identity = 84/155 (54.19%), Postives = 108/155 (69.68%), Query Frame = 2
Query: 8 SIPVFADANYAKKVDNLRSMSGVAVTVGKSYVSWFSSTQKIVTLSTTEAEYVALEDGVKEALFVKEVLSFIILYISEKCIKVFVDNDGAISPANNPLSSETTKHIDVRFHFVRELTRSKTISVEYVPTKEQRADILTKALMGAIFKEHRNFLMNL 472
S+ +ADA++A K + RS+SG VT G VSWFS TQK VTLSTTEAEYVAL + VK LF++++ F++ + CI VF DN GAI A NP+S+ +KHIDVR HF+REL K ISV +VP+ QRAD LTK+L F+ HR+F+MNL
Sbjct: 61 SLQGYADADFASKAADRRSVSGGIVTCGGGAVSWFSRTQKCVTLSTTEAEYVALGEVVKVILFLRQIWRFMLPQVGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFLRELVERKEISVIHVPSPYQRADFLTKSLSKDAFESHRDFVMNL 215
BLAST of mRNA_F-serratus_M_contig903.20457.1 vs. uniprot
Match: A0A6H5K7L4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7L4_9PHAE) HSP 1 Score: 157 bits (396), Expect = 1.010e-42 Identity = 81/155 (52.26%), Postives = 106/155 (68.39%), Query Frame = 2
Query: 8 SIPVFADANYAKKVDNLRSMSGVAVTVGKSYVSWFSSTQKIVTLSTTEAEYVALEDGVKEALFVKEVLSFIILYISEKCIKVFVDNDGAISPANNPLSSETTKHIDVRFHFVRELTRSKTISVEYVPTKEQRADILTKALMGAIFKEHRNFLMNL 472
S+ + DA++A K + RS+SG VT G VSWFS TQK VTLSTTEAEYV+L D VKE LF++++ F++ + CI +F DN GAI A NP+S+ +KHIDVR HF+REL K IS +VP+ QRAD L K+L F+ HR+F+MNL
Sbjct: 49 SLQGYTDADFASKAADRRSVSGGIVTCGGGAVSWFSRTQKCVTLSTTEAEYVSLGDAVKEILFLRQIWRFMLPQVGMPCIPIFEDNQGAIQLAQNPISNSNSKHIDVRHHFLRELVERKAISAIHVPSPYQRADFLPKSLSEDAFESHRDFVMNL 203
BLAST of mRNA_F-serratus_M_contig903.20457.1 vs. uniprot
Match: A0A6H5JTK6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTK6_9PHAE) HSP 1 Score: 159 bits (401), Expect = 1.880e-42 Identity = 87/171 (50.88%), Postives = 115/171 (67.25%), Query Frame = 2
Query: 8 SIPVFADANYAKKVDNLRSMSGVAVTVGKSYVSWFSSTQKIVTLSTTEAEYVALEDGVKEALFVKEVLSFIILYISEKCIKVFVDNDGAISPANNPLSSETTKHIDVRFHFVRELTRSKTISVEYVPTKEQRADILTKALMGAIFKEHRNFLMNLHG*ISDSVY-LCDSSS 517
S+ VFADA+YA K + RS+SG V G +SWFS TQK VTLSTTEAEYV+L D +KE LF+++V F++ CI V DN GAI A NP+S+ T+KHIDVR HF+REL R K IS+ +V + Q AD LTKAL F+ HRN++M++ I +Y +CD ++
Sbjct: 99 SMEVFADADYASKAADRRSVSGGLVMCGGGCMSWFSRTQKCVTLSTTEAEYVSLADVMKEVLFLRQVRRFVLPEAGMPCIPVLEDNQGAIQLAQNPISNSTSKHIDVRHHFIRELVRRKEISIFHVESAYQHADFLTKALNAGDFECHRNYVMSMDYYIGVWIYFVCDQTT 269
BLAST of mRNA_F-serratus_M_contig903.20457.1 vs. uniprot
Match: A0A6H5KSZ5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSZ5_9PHAE) HSP 1 Score: 159 bits (401), Expect = 2.140e-42 Identity = 83/155 (53.55%), Postives = 108/155 (69.68%), Query Frame = 2
Query: 8 SIPVFADANYAKKVDNLRSMSGVAVTVGKSYVSWFSSTQKIVTLSTTEAEYVALEDGVKEALFVKEVLSFIILYISEKCIKVFVDNDGAISPANNPLSSETTKHIDVRFHFVRELTRSKTISVEYVPTKEQRADILTKALMGAIFKEHRNFLMNL 472
S+ +ADA++A K + RS+SG VT G VSWFS TQK VTLSTTEAEYVAL D VKE LF++++ F++ + CI +F DN GAI A NP+S+ +KHIDVR HF+REL + SV +VP+ QRAD LTK+L F+ HR+F+MNL
Sbjct: 137 SLQGYADADFASKAADRRSVSGGIVTCGGGAVSWFSITQKCVTLSTTEAEYVALGDVVKEILFLRQIWRFMLPQVGIPCIPIFEDNQGAIQLAQNPISNSNSKHIDVRHHFLRELVEREEFSVMHVPSPNQRADCLTKSLSKDAFESHRDFVMNL 291
BLAST of mRNA_F-serratus_M_contig903.20457.1 vs. uniprot
Match: A0A6H5JKS3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKS3_9PHAE) HSP 1 Score: 167 bits (423), Expect = 5.090e-42 Identity = 91/156 (58.33%), Postives = 113/156 (72.44%), Query Frame = 2
Query: 11 IPVFADANYAKKVDNLRSMSGVAVTVGKSYVSWFSSTQKIVTLSTTEAEYVALEDGVKEALFVKEVLSFIILYISEKCIKVFVDNDGAISPANNPLSSETTKHIDVRFHFVRELTRSKTISVEYVPTKEQRADILTKALMGAIFKEHRNFLMNLHG 478
+ V+ DA+YA + RS++G+AVTVG + VS S TQ+IV+LST+EAEY+A +GVKEALFV+ VLSFI S IKV DN GAIS NP SS +KHIDVRFHF+REL +S ISVEY+PT EQ AD+LTKAL ++HRN LMN+ G
Sbjct: 1091 LEVYVDASYADRDTGRRSVTGIAVTVGGTVVSHASKTQRIVSLSTSEAEYIAAGEGVKEALFVRAVLSFIAPETSGAKIKVLEDNQGAISLVQNPFSSARSKHIDVRFHFIRELFKSGRISVEYIPTDEQHADLLTKALGRTKLEDHRNALMNIPG 1246
BLAST of mRNA_F-serratus_M_contig903.20457.1 vs. uniprot
Match: A0A6H5L175_9PHAE (Uncharacterized protein n=9 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L175_9PHAE) HSP 1 Score: 167 bits (423), Expect = 5.570e-42 Identity = 91/156 (58.33%), Postives = 113/156 (72.44%), Query Frame = 2
Query: 11 IPVFADANYAKKVDNLRSMSGVAVTVGKSYVSWFSSTQKIVTLSTTEAEYVALEDGVKEALFVKEVLSFIILYISEKCIKVFVDNDGAISPANNPLSSETTKHIDVRFHFVRELTRSKTISVEYVPTKEQRADILTKALMGAIFKEHRNFLMNLHG 478
+ V+ DA+YA + RS++G+AVTVG + VS S TQ+IV+LST+EAEY+A +GVKEALFV+ VLSFI S IKV DN GAIS NP SS +KHIDVRFHF+REL +S ISVEY+PT EQ AD+LTKAL ++HRN LMN+ G
Sbjct: 1644 LEVYVDASYADRDTGRRSVTGIAVTVGGTVVSHASKTQRIVSLSTSEAEYIAAGEGVKEALFVRAVLSFIAPETSGAKIKVLEDNQGAISLVQNPFSSARSKHIDVRFHFIRELFKSGRISVEYIPTDEQHADLLTKALGRTKLEDHRNALMNIPG 1799 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig903.20457.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig903.20457.1 >prot_F-serratus_M_contig903.20457.1 ID=prot_F-serratus_M_contig903.20457.1|Name=mRNA_F-serratus_M_contig903.20457.1|organism=Fucus serratus male|type=polypeptide|length=139bp MSGVAVTVGKSYVSWFSSTQKIVTLSTTEAEYVALEDGVKEALFVKEVLSback to top mRNA from alignment at F-serratus_M_contig903:284426..285543+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig903.20457.1 ID=mRNA_F-serratus_M_contig903.20457.1|Name=mRNA_F-serratus_M_contig903.20457.1|organism=Fucus serratus male|type=mRNA|length=1118bp|location=Sequence derived from alignment at F-serratus_M_contig903:284426..285543+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig903:284426..285543+ >mRNA_F-serratus_M_contig903.20457.1 ID=mRNA_F-serratus_M_contig903.20457.1|Name=mRNA_F-serratus_M_contig903.20457.1|organism=Fucus serratus male|type=CDS|length=834bp|location=Sequence derived from alignment at F-serratus_M_contig903:284426..285543+ (Fucus serratus male)back to top |