mRNA_F-serratus_M_contig903.20451.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig903.20451.1
Unique NamemRNA_F-serratus_M_contig903.20451.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig903.20451.1 vs. uniprot
Match: D7FTF8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTF8_ECTSI)

HSP 1 Score: 531 bits (1368), Expect = 1.140e-182
Identity = 253/302 (83.77%), Postives = 273/302 (90.40%), Query Frame = 3
Query:  408 SDGDFSSRSVDQVVLSRQQPEGMGAMVRRSIGGGRLRNFDPFLLLDEFDVGPPAGFPDHPHRGFETVTYMLKGITEHEDFCGHRGKIGPGSLQWMTAGRGIVHAEMPFGPDRGLGLQLWVNLKSKDKMVEPAYQELNKEEIPTVTKDGVTAVVIAGEALGTSSPVYTRTPTHYIHFKMEPNTELKQPIPSTMNSFLYVLEGKAAIGDGQGDKDQIDAHNTVTLTKEGSGVTVKTFDSPADFVLISGEPTNEPVVQHGPFVMNTRQEIQQAMMDYQSNSNGFENASKWYSQIGLPLTGADKRR 1313
            S+G+FSSRSVDQVVLSR+Q EG GA VRRSIGG  LRNFDPFL+LDEFDV   AGFPDHPHRGFETVTYMLKGI EHEDFCGHRGKIGPGSLQWMTAG+GIVHAEMP GPDRG GLQLWVNLKS DKMV PAYQELN +EIP  TKDGVTA+VIAGEALG SSPV TRTPTHYIHFKMEP +ELKQPIP+ MN FLY+LEGKAA+G G+ +KDQI AHNTVTLTK GSGV VKTFDS ADFVL+ GEPTNEPVVQHGPFVMNTRQEIQ+AM+DYQS+SNGFENASKWYS+IGLP+T AD+RR
Sbjct:    3 SEGEFSSRSVDQVVLSREQAEGQGARVRRSIGGVALRNFDPFLMLDEFDVATTAGFPDHPHRGFETVTYMLKGIMEHEDFCGHRGKIGPGSLQWMTAGKGIVHAEMPTGPDRGHGLQLWVNLKSGDKMVSPAYQELNADEIPRATKDGVTAIVIAGEALGISSPVQTRTPTHYIHFKMEPGSELKQPIPTNMNGFLYILEGKAAVGPGREEKDQIQAHNTVTLTKGGSGVLVKTFDSSADFVLVCGEPTNEPVVQHGPFVMNTRQEIQEAMLDYQSSSNGFENASKWYSEIGLPMTHADRRR 304          
BLAST of mRNA_F-serratus_M_contig903.20451.1 vs. uniprot
Match: A0A835YLH7_9STRA (RmlC-like cupin domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLH7_9STRA)

HSP 1 Score: 422 bits (1086), Expect = 3.370e-140
Identity = 207/299 (69.23%), Postives = 235/299 (78.60%), Query Frame = 3
Query:  420 FSSRSVDQVVLSRQQPEGMGAMVRRSIGGGRLRNFDPFLLLDEFDVGPPAGFPDHPHRGFETVTYMLKGITEHEDFCGHRGKIGPGSLQWMTAGRGIVHAEMPFGPDRGLGLQLWVNLKSKDKMVEPAYQELNKEEIPTVTKD-GVTAVVIAGEALGTSSPVYTRTPTHYIHFKMEPNTELKQPIPSTMNSFLYVLEGKAAIGDGQGDKDQIDAHNTVTLTKEGSGVTVKTFDSPADFVLISGEPTNEPVVQHGPFVMNTRQEIQQAMMDYQSNSNGFENASKWYSQIGLPLTGADKRR 1313
            F SRS D+VVLSR Q EG+GA VRRSIG   LRNFDPFL+LDEFD G PAGFPDHPHRGFETVTYML+G  EHEDF G+RGKIGPG LQWMTAGRGIVH+EMPFG  R  GLQLWVNL SKDKM EPAYQEL  EEIP V+   GV+A VIAG ALGT SPVYTRTP HY+H+ MEP + L+  IP+  ++FLY L+G   +G   G   ++ AH+T+TL  +G GV VK   + ADFVLI G+P  EP+VQHGPFVMNTR EIQQAM+DYQS SNGFE A KWYSQIGLP+T AD+RR
Sbjct:    4 FKSRSADKVVLSRAQSEGVGATVRRSIGNHELRNFDPFLMLDEFDSGKPAGFPDHPHRGFETVTYMLEGAFEHEDFMGNRGKIGPGDLQWMTAGRGIVHSEMPFGDGRSHGLQLWVNLGSKDKMCEPAYQELKAEEIPEVSDGKGVSARVIAGTALGTDSPVYTRTPAHYVHYTMEPGSVLQHAIPAGWSAFLYTLKGDVEVGGSGGV--EVAAHHTITLDGDGEGVEVKAGKAGADFVLICGKPHGEPIVQHGPFVMNTRAEIQQAMLDYQSGSNGFEGAGKWYSQIGLPITHADRRR 300          
BLAST of mRNA_F-serratus_M_contig903.20451.1 vs. uniprot
Match: A0A226EWE3_FOLCA (Pirin n=1 Tax=Folsomia candida TaxID=158441 RepID=A0A226EWE3_FOLCA)

HSP 1 Score: 381 bits (978), Expect = 4.550e-124
Identity = 183/294 (62.24%), Postives = 219/294 (74.49%), Query Frame = 3
Query:  420 FSSRSVDQVVLSRQQPEGMGAMVRRSIGGGRLRNFDPFLLLDEFDVGPPAGFPDHPHRGFETVTYML---KGITEHEDFCGHRGKIGPGSLQWMTAGRGIVHAEMPFGPDRGLGLQLWVNLKSKDKMVEPAYQELNKEEIPTVTKDGVTAVVIAGEALGTSSPVYTRTPTHYIHFKMEPNTELKQPIPSTMNSFLYVLEGKAAIGDGQGDKDQIDAHNTVTLTKEGSGVTVKTFDSPADFVLISGEPTNEPVVQHGPFVMNTRQEIQQAMMDYQSNSNGFENASKWYSQIGLPL 1292
            FSSR V QV+LS +Q EG+GA VRRSIG   LRNFDPFL+LDEF  G PAGFPDHPHRGFETVTY+L   KG  EHEDFCGHRG IGPG LQWMTAGRGI+H+EMP   +   GLQLW+NL +KDKM  P YQEL  E++P +TKDGVTA++IAGE+LGT S +YTRTPT+YIHF MEPN+ ++Q +PS   +F Y +EGK     G    + IDAH+TVT    G G+  +T D P +FVLISG+P  EPVVQHGPFVM+T++EI +A+ DY    NGFENA  W S+I   L
Sbjct:    3 FSSRGVKQVLLSVEQSEGVGAKVRRSIGRQELRNFDPFLMLDEFRAGRPAGFPDHPHRGFETVTYILPTSKGSFEHEDFCGHRGTIGPGDLQWMTAGRGILHSEMPLSDEISHGLQLWINLSAKDKMCPPEYQELRSEDVPKITKDGVTAIIIAGESLGTVSKIYTRTPTNYIHFIMEPNSRIEQRVPSEWAAFAYTVEGKVKFSAG----NFIDAHSTVTFNPGGDGIIAETGDEPGNFVLISGKPIGEPVVQHGPFVMSTQKEIIEAINDYSQAKNGFENAQTWESEIAKKL 292          
BLAST of mRNA_F-serratus_M_contig903.20451.1 vs. uniprot
Match: F2TX92_SALR5 (Pirin family protein n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2TX92_SALR5)

HSP 1 Score: 376 bits (966), Expect = 1.440e-121
Identity = 184/291 (63.23%), Postives = 226/291 (77.66%), Query Frame = 3
Query:  426 SRSVDQVVLSRQQPEGMGAMVRRSIGGGRLRNFDPFLLLDEFDVGPPAGFPDHPHRGFETVTYMLKGITEHEDFCGHRGKIGPGSLQWMTAGRGIVHAEMPFGPDRGLGLQLWVNLKSKDKMVEPAYQELNKEEIPTVTKDGVTAVVIAGEALGTSSPVYTRTPTHYIHFKMEPNTELKQPIPSTMNSFLYVLEGKAAIGDGQGDKDQIDAHNTVTLTK--EGSGVTVKTFDSPADFVLISGEPTNEPVVQHGPFVMNTRQEIQQAMMDYQSNSNGFENASKWYSQIGLPL 1292
            SR+V+Q +LS++Q EGMGA VRRSIG   LRNFDPFL+LDEF V   AGFPDHPHRGFETVTYML G  EHEDFCGHRG+I  G LQWMTAGRG+VHAEMP   + G GLQLWVNL +KDK+VEP YQEL  +EIP   KDGV A++IAG+A G  SPV+TRTPT+Y+HFKM+P++ L Q IP+ MN+FLY L G   +G+  G+K   +AH+TVTLT+  E +GVT+K     A+FVLI+G P  EP+VQ+GPFVMNT ++IQQA +DYQ+  NGFE A ++ S+IG PL
Sbjct:   55 SRAVNQQLLSQEQGEGMGARVRRSIGRPELRNFDPFLMLDEFRVKKGAGFPDHPHRGFETVTYMLDGAFEHEDFCGHRGRINAGDLQWMTAGRGVVHAEMPAS-EEGHGLQLWVNLGAKDKLVEPQYQELKADEIPHAEKDGVEAIIIAGKAFGVESPVFTRTPTYYLHFKMQPDSRLDQEIPAEMNAFLYTLSGTILVGES-GEK--CEAHSTVTLTRDDEQTGVTIKADKGAAEFVLIAGVPHGEPIVQYGPFVMNTPEQIQQAFLDYQTGRNGFEKARRFQSEIGKPL 341          
BLAST of mRNA_F-serratus_M_contig903.20451.1 vs. uniprot
Match: A0A8B6FFM8_MYTGA (Uncharacterized protein n=2 Tax=Mytilus galloprovincialis TaxID=29158 RepID=A0A8B6FFM8_MYTGA)

HSP 1 Score: 362 bits (930), Expect = 6.020e-117
Identity = 177/285 (62.11%), Postives = 209/285 (73.33%), Query Frame = 3
Query:  426 SRSVDQVVLSRQQPEGMGAMVRRSIGGGRLRNFDPFLLLDEFDVGPPAGFPDHPHRGFETVTYMLKGITEHEDFCGHRGKIGPGSLQWMTAGRGIVHAEMPFGPDRGLGLQLWVNLKSKDKMVEPAYQELNKEEIPTVTKDGVTAVVIAGEALGTSSPVYTRTPTHYIHFKMEPNTELKQPIPSTMNSFLYVLEGKAAIGDGQGDKDQIDAHNTVTLTKEGSGVTVKTFDSP--ADFVLISGEPTNEPVVQHGPFVMNTRQEIQQAMMDYQSNSNGFENASKWYS 1274
            SR V Q + +++Q EG+GA VRRS+G  +LRNFDPFLLLD+F V  PAGFPDHPHRGFETVTY+L+G   HEDFCGH+G I PG LQWMTAGRGIVH EMP G ++  GLQLWVNL SKDKM  PAYQEL  ++IP   ++GV   VIAGE+LG  SPVYTRTPT Y+ F+++    L QPIP   NSF+Y L GKA  G+G   K Q +AHNT+ L + G G+ V+   SP    FVLI G+P  EPV QHGPFVMNT +EIQQAM DYQ   NGFENAS+W S
Sbjct:    3 SRKVKQAIQNKEQDEGVGAKVRRSVGSNQLRNFDPFLLLDDFSVKAPAGFPDHPHRGFETVTYVLEGGVTHEDFCGHKGTIHPGDLQWMTAGRGIVHCEMPHGTEQAHGLQLWVNLASKDKMTAPAYQELLDKDIPKTKQNGVHVKVIAGESLGIKSPVYTRTPTMYLDFQLDQGAALNQPIPQGWNSFIYTLSGKATFGEGSAAK-QHEAHNTLVLDQNGDGIRVEN-KSPELCRFVLIGGKPLGEPVKQHGPFVMNTPEEIQQAMFDYQMGKNGFENASRWES 285          
BLAST of mRNA_F-serratus_M_contig903.20451.1 vs. uniprot
Match: A0A8J5AK36_9DIPT (Uncharacterized protein n=2 Tax=Bradysia TaxID=35571 RepID=A0A8J5AK36_9DIPT)

HSP 1 Score: 362 bits (928), Expect = 1.810e-116
Identity = 184/305 (60.33%), Postives = 216/305 (70.82%), Query Frame = 3
Query:  420 FSSRSVDQVVLSRQQPEGMGAMVRRSIGGGRLRNFDPFLLLDEFDVGPP--AGFPDHPHRGFETVTYML---KGITEHEDFCGHRGKIGPGSLQWMTAGRGIVHAEMPFGPDRGLGLQLWVNLKSKDKMVEPAYQELNKEEIPTVTKDGVTAVVIAGEALGTSSPVYTRTPTHYIHFKMEPNTELKQPIPSTMNSFLYVLEGKAAIGD---GQGDKDQIDAHNTVTLTKEGSGVTVKTFDSPADFVLISGEPTNEPVVQHGPFVMNTRQEIQQAMMDYQSNSNGFENASKWYSQIGLPLTGADKR 1310
            F SR + ++VLS +Q EG GA VRRSIG   L+NFDPFLLLDEF       +GFPDHPHRGFETVTY+L   +G  +HEDFCGH+G I PG+LQWMTAGRGIVH+EMP+G   G GLQLWVNL SKDKM EPAYQEL  +EI TV KDG+TA+VIAG A G  S VYTRTP HY HF MEPNT L+  IP    SF+YVL GK  + +   GQ     I+AHNT+ L + G GV V   D  ++FVLISG+P  E VVQHGPFVMN++ EI+QA  DYQ+  NGFE A  W S+IG  L    K+
Sbjct:    3 FKSRGISKIVLSVEQSEGRGARVRRSIGRPELKNFDPFLLLDEFKSSSETLSGFPDHPHRGFETVTYVLPTSQGSFQHEDFCGHKGTIEPGALQWMTAGRGIVHSEMPYGSGVGHGLQLWVNLHSKDKMCEPAYQELKADEITTVKKDGITAIVIAGNAFGVESKVYTRTPMHYTHFIMEPNTVLQHHIPVNWTSFIYVLSGKIKVENCTTGQ----FIEAHNTIALNEHGDGVIVTAGDEGSNFVLISGKPIGEKVVQHGPFVMNSQAEIEQAFDDYQNGKNGFEKAPGWESEIGKVLLKPSKK 303          
BLAST of mRNA_F-serratus_M_contig903.20451.1 vs. uniprot
Match: A9V3G4_MONBE (Predicted protein n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9V3G4_MONBE)

HSP 1 Score: 361 bits (927), Expect = 1.080e-115
Identity = 183/294 (62.24%), Postives = 215/294 (73.13%), Query Frame = 3
Query:  420 FSSRSVDQVVLSRQQPEGMGAMVRRSIGGGRLRNFDPFLLLDEFDVGPPAGFPDHPHRGFETVTYMLKGITEHEDFCGHRGKIGPGSLQWMTAGRGIVHAEMPFGPDRGL---GLQLWVNLKSKDKMVEPAYQELNKEEIPTVTKDGVTAVVIAGEALGTSSPVYTRTPTHYIHFKMEPNTELKQPIPSTMNSFLYVLEGKAAIGDGQGDKDQIDAHNTVTLTKEGSG---VTVKTFDSPADFVLISGEPTNEPVVQHGPFVMNTRQEIQQAMMDYQSNSNGFENASKWYSQIG 1283
            F SR+VD+ VLSR+Q EG GA VRRSIG   LRNFDPFL+LDEF V   AGFPDHPHRGFETVT+ML G+ EHEDF GH G IGPG LQWMTAG+GIVHAEMP  P+      GLQLW+NL SKDKMV P YQEL  E+IP V KDGV   VIAGEALGT SPVYT TP+ Y+HFK++P + ++Q IP   N+F+Y L+GK  IGD      +IDAH+T TLT++ S    V     +  A+FVLI GEP NEP+ Q+GPFVMNTR+EI +A  DYQS  NGFE A  + S+IG
Sbjct:   52 FVSRAVDKKVLSREQGEGAGARVRRSIGNAALRNFDPFLMLDEFRVPLTAGFPDHPHRGFETVTFMLDGLFEHEDFAGHAGTIGPGDLQWMTAGKGIVHAEMPH-PESDAEPHGLQLWINLGSKDKMVPPKYQELKNEDIPKVEKDGVWVAVIAGEALGTKSPVYTVTPSCYLHFKIQPQSRIEQAIPPEFNAFVYTLKGKLKIGD---KGTEIDAHHTATLTRDASANGVVLANEGEEVAEFVLIGGEPHNEPIEQYGPFVMNTREEIMKAFTDYQSGRNGFERAPTFQSKIG 341          
BLAST of mRNA_F-serratus_M_contig903.20451.1 vs. uniprot
Match: A0A6J8ANT6_MYTCO (PIR n=3 Tax=Mytilus TaxID=6548 RepID=A0A6J8ANT6_MYTCO)

HSP 1 Score: 357 bits (916), Expect = 7.440e-115
Identity = 177/285 (62.11%), Postives = 207/285 (72.63%), Query Frame = 3
Query:  426 SRSVDQVVLSRQQPEGMGAMVRRSIGGGRLRNFDPFLLLDEFDVGPPAGFPDHPHRGFETVTYMLKGITEHEDFCGHRGKIGPGSLQWMTAGRGIVHAEMPFGPDRGLGLQLWVNLKSKDKMVEPAYQELNKEEIPTVTKDGVTAVVIAGEALGTSSPVYTRTPTHYIHFKMEPNTELKQPIPSTMNSFLYVLEGKAAIGDGQGDKDQIDAHNTVTLTKEGSGVTVKTFDSP--ADFVLISGEPTNEPVVQHGPFVMNTRQEIQQAMMDYQSNSNGFENASKWYS 1274
            SR+V Q + +++Q EG+GA VRRS+G  +LRNFDPFLLLD+F V  PAGFPDHPHRGFETVTY+L+G   HEDFCGH+G I PG LQWMTAGRGIVH EMP G ++  GLQLWVNL SKDKM  PAYQEL  ++IP   ++GV   VIAGE+LG  SPVYTRTPT Y+ F+++    L QPIP   N F+Y L GKA  G+G+  K Q  AH T+ L + G GV V+   SP    FVLI G+P  EPV QHGPFVMNT  EIQQAM DYQ   NGFENASKW S
Sbjct:    3 SRNVKQAIQNKEQDEGVGAKVRRSVGSSQLRNFDPFLLLDDFRVKAPAGFPDHPHRGFETVTYVLEGGVTHEDFCGHKGTIHPGDLQWMTAGRGIVHCEMPHGTEQAHGLQLWVNLSSKDKMTAPAYQELLDKDIPKTKQNGVHVKVIAGESLGIKSPVYTRTPTMYLDFQLDQGAGLNQPIPQGWNVFIYTLSGKATFGEGEAAK-QHGAHYTLVLDQNGDGVRVEN-KSPELCRFVLIGGKPLGEPVKQHGPFVMNTPDEIQQAMFDYQMGKNGFENASKWES 285          
BLAST of mRNA_F-serratus_M_contig903.20451.1 vs. uniprot
Match: A0A210QK08_MIZYE (Pirin n=3 Tax=Mizuhopecten yessoensis TaxID=6573 RepID=A0A210QK08_MIZYE)

HSP 1 Score: 357 bits (915), Expect = 9.610e-114
Identity = 177/299 (59.20%), Postives = 212/299 (70.90%), Query Frame = 3
Query:  393 QYCAMSDGDFSSRSVDQVVLSRQQPEGMGAMVRRSIGGGRLRNFDPFLLLDEFDVGPPAGFPDHPHRGFETVTYMLKGITEHEDFCGHRGKIGPGSLQWMTAGRGIVHAEMPFGPDRGLGLQLWVNLKSKDKMVEPAYQELNKEEIPTVTKDGVTAVVIAGEALGTSSPVYTRTPTHYIHFKMEPNTELKQPIPSTMNSFLYVLEGKAAIGDGQGDKDQIDAHNTVTLTKEGSGVTVKTFDSPAD---FVLISGEPTNEPVVQHGPFVMNTRQEIQQAMMDYQSNSNGFENASKWYSQI 1280
            QYC++     +S+SV + VLS +Q EG+GA VRRS+G   LRN DPFL+LDEF    P GFPDHPHRGFETVTY+LKG   HEDFCGH G I  G LQWMTAGRGIVH EMP+G     GLQLWVNL +K+KM++PAYQEL  ++IP  TKDGVT  VIAGEA G  SPVYTRTPT Y+ FKM+P T+L QPIP    SFLY+L+G    GD    K+ +D H T  L+KEG  +  + ++   +   FVLI GEP NEP+VQHG FVMNT++EI QA+ DYQ   NGFENA  W S +
Sbjct:   54 QYCSVI-ATMTSKSVVKSVLSVEQDEGVGARVRRSVGRAELRNLDPFLMLDEFKDKQPGGFPDHPHRGFETVTYILKGAIRHEDFCGHAGTINEGDLQWMTAGRGIVHCEMPWGDGITHGLQLWVNLSAKNKMIKPAYQELLDKDIPRTTKDGVTVKVIAGEAFGIKSPVYTRTPTMYLDFKMDPGTKLAQPIPKGFTSFLYILQGTGHFGDSAHQKE-VDTHTTAVLSKEGDQL--EAYNKGKEMLHFVLIGGEPLNEPIVQHGLFVMNTQEEINQALKDYQREQNGFENALTWNSFV 348          
BLAST of mRNA_F-serratus_M_contig903.20451.1 vs. uniprot
Match: UPI00145833A6 (pirin-like isoform X1 n=2 Tax=Pecten maximus TaxID=6579 RepID=UPI00145833A6)

HSP 1 Score: 352 bits (904), Expect = 4.200e-112
Identity = 172/296 (58.11%), Postives = 213/296 (71.96%), Query Frame = 3
Query:  393 QYCAMSDGDFSSRSVDQVVLSRQQPEGMGAMVRRSIGGGRLRNFDPFLLLDEFDVGPPAGFPDHPHRGFETVTYMLKGITEHEDFCGHRGKIGPGSLQWMTAGRGIVHAEMPFGPDRGLGLQLWVNLKSKDKMVEPAYQELNKEEIPTVTKDGVTAVVIAGEALGTSSPVYTRTPTHYIHFKMEPNTELKQPIPSTMNSFLYVLEGKAAIGDGQGDKDQIDAHNTVTLTKEGSGVTVKTFDSPA-DFVLISGEPTNEPVVQHGPFVMNTRQEIQQAMMDYQSNSNGFENASKWYSQ 1277
            QYC++     +++SV + VLS +Q EG+GA VRRS+G   L+N DPFL+LDEF    P GFPDHPHRGFETVTY+LKG   HEDFCGH G I  G LQWMTAGRGIVH EMP+G     GLQLWVNL +++KM++PAYQEL  ++IP  TKDGVT  VIAGE+ G  SPVYTRTPT Y+ FKM+P + L QPIP+   SFLYVL GK   G G+G + ++ AH+TV L+KEG  + V+        FVL+ G+P  +P+VQHGPFVMNT QEIQQAM+D+   +NGFE    W S+
Sbjct:   54 QYCSVIP-TMTAKSVVKTVLSVEQDEGVGARVRRSVGRPELQNLDPFLMLDEFKGQQPGGFPDHPHRGFETVTYILKGAVRHEDFCGHAGTINEGDLQWMTAGRGIVHCEMPWGDGVTHGLQLWVNLSAENKMIKPAYQELLDKDIPQTTKDGVTVKVIAGESFGIKSPVYTRTPTMYLDFKMDPGSTLAQPIPNGFTSFLYVLNGKGHFG-GRGHQQEVGAHHTVVLSKEGDLLEVQNKGREMLRFVLVGGKPLGQPIVQHGPFVMNTAQEIQQAMVDFHQGTNGFEGVRTWQSE 347          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig903.20451.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FTF8_ECTSI1.140e-18283.77Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YLH7_9STRA3.370e-14069.23RmlC-like cupin domain-containing protein n=1 Tax=... [more]
A0A226EWE3_FOLCA4.550e-12462.24Pirin n=1 Tax=Folsomia candida TaxID=158441 RepID=... [more]
F2TX92_SALR51.440e-12163.23Pirin family protein n=1 Tax=Salpingoeca rosetta (... [more]
A0A8B6FFM8_MYTGA6.020e-11762.11Uncharacterized protein n=2 Tax=Mytilus galloprovi... [more]
A0A8J5AK36_9DIPT1.810e-11660.33Uncharacterized protein n=2 Tax=Bradysia TaxID=355... [more]
A9V3G4_MONBE1.080e-11562.24Predicted protein n=1 Tax=Monosiga brevicollis Tax... [more]
A0A6J8ANT6_MYTCO7.440e-11562.11PIR n=3 Tax=Mytilus TaxID=6548 RepID=A0A6J8ANT6_MY... [more]
A0A210QK08_MIZYE9.610e-11459.20Pirin n=3 Tax=Mizuhopecten yessoensis TaxID=6573 R... [more]
UPI00145833A64.200e-11258.11pirin-like isoform X1 n=2 Tax=Pecten maximus TaxID... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig903contigF-serratus_M_contig903:149728..161925 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score533.1
Seed ortholog evalue1.1e-148
Seed eggNOG ortholog2880.D7FTF8
Preferred namePIR
KEGG koko:K06911
Hectar predicted targeting categorychloroplast
GOsGO:0001101,GO:0002376,GO:0002520,GO:0002521,GO:0002573,GO:0003674,GO:0003712,GO:0003824,GO:0004857,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006351,GO:0006366,GO:0006725,GO:0006807,GO:0006950,GO:0006952,GO:0007154,GO:0007165,GO:0007275,GO:0007586,GO:0008127,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009314,GO:0009416,GO:0009605,GO:0009607,GO:0009617,GO:0009628,GO:0009637,GO:0009719,GO:0009725,GO:0009737,GO:0009738,GO:0009755,GO:0009785,GO:0009889,GO:0009892,GO:0009987,GO:0010033,GO:0010466,GO:0010467,GO:0010556,GO:0010605,GO:0016020,GO:0016070,GO:0016491,GO:0016701,GO:0016702,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0023052,GO:0030097,GO:0030099,GO:0030154,GO:0030162,GO:0030224,GO:0030234,GO:0030414,GO:0030522,GO:0031323,GO:0031324,GO:0031326,GO:0031974,GO:0031981,GO:0032268,GO:0032269,GO:0032501,GO:0032502,GO:0032774,GO:0032870,GO:0033993,GO:0034641,GO:0034645,GO:0034654,GO:0042221,GO:0042742,GO:0043086,GO:0043167,GO:0043169,GO:0043170,GO:0043207,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044092,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0045861,GO:0046483,GO:0046872,GO:0048513,GO:0048519,GO:0048523,GO:0048534,GO:0048731,GO:0048856,GO:0048869,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051171,GO:0051172,GO:0051213,GO:0051246,GO:0051248,GO:0051252,GO:0051336,GO:0051346,GO:0051704,GO:0051707,GO:0051716,GO:0052547,GO:0055114,GO:0060255,GO:0061134,GO:0065007,GO:0065009,GO:0070013,GO:0070887,GO:0071214,GO:0071215,GO:0071229,GO:0071310,GO:0071396,GO:0071478,GO:0071482,GO:0071483,GO:0071495,GO:0071704,GO:0071944,GO:0080090,GO:0090304,GO:0097305,GO:0097306,GO:0097659,GO:0098542,GO:0098772,GO:0104004,GO:0140110,GO:1901360,GO:1901362,GO:1901576,GO:1901700,GO:1901701,GO:1903131,GO:1903506,GO:2001141
EggNOG free text desc.quercetin 2,3-dioxygenase activity
EggNOG OGs2QQ5A@2759,COG1741@1
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000
Exons10
Model size2209
Cds size1131
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig903.20451.1prot_F-serratus_M_contig903.20451.1Fucus serratus malepolypeptideF-serratus_M_contig903 150618..161737 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932637.0840297-UTR-F-serratus_M_contig903:149727..1506171622932637.0840297-UTR-F-serratus_M_contig903:149727..150617Fucus serratus maleUTRF-serratus_M_contig903 149728..150617 -
1690964397.929484-UTR-F-serratus_M_contig903:149727..1506171690964397.929484-UTR-F-serratus_M_contig903:149727..150617Fucus serratus maleUTRF-serratus_M_contig903 149728..150617 -
1622932637.2687058-UTR-F-serratus_M_contig903:161737..1619251622932637.2687058-UTR-F-serratus_M_contig903:161737..161925Fucus serratus maleUTRF-serratus_M_contig903 161738..161925 -
1690964398.044891-UTR-F-serratus_M_contig903:161737..1619251690964398.044891-UTR-F-serratus_M_contig903:161737..161925Fucus serratus maleUTRF-serratus_M_contig903 161738..161925 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932637.1051548-CDS-F-serratus_M_contig903:150617..1507341622932637.1051548-CDS-F-serratus_M_contig903:150617..150734Fucus serratus maleCDSF-serratus_M_contig903 150618..150734 -
1690964397.943116-CDS-F-serratus_M_contig903:150617..1507341690964397.943116-CDS-F-serratus_M_contig903:150617..150734Fucus serratus maleCDSF-serratus_M_contig903 150618..150734 -
1622932637.1225998-CDS-F-serratus_M_contig903:151229..1513491622932637.1225998-CDS-F-serratus_M_contig903:151229..151349Fucus serratus maleCDSF-serratus_M_contig903 151230..151349 -
1690964397.9538286-CDS-F-serratus_M_contig903:151229..1513491690964397.9538286-CDS-F-serratus_M_contig903:151229..151349Fucus serratus maleCDSF-serratus_M_contig903 151230..151349 -
1622932637.1427062-CDS-F-serratus_M_contig903:151925..1520301622932637.1427062-CDS-F-serratus_M_contig903:151925..152030Fucus serratus maleCDSF-serratus_M_contig903 151926..152030 -
1690964397.9644885-CDS-F-serratus_M_contig903:151925..1520301690964397.9644885-CDS-F-serratus_M_contig903:151925..152030Fucus serratus maleCDSF-serratus_M_contig903 151926..152030 -
1622932637.1590958-CDS-F-serratus_M_contig903:152714..1527631622932637.1590958-CDS-F-serratus_M_contig903:152714..152763Fucus serratus maleCDSF-serratus_M_contig903 152715..152763 -
1690964397.974757-CDS-F-serratus_M_contig903:152714..1527631690964397.974757-CDS-F-serratus_M_contig903:152714..152763Fucus serratus maleCDSF-serratus_M_contig903 152715..152763 -
1622932637.1779726-CDS-F-serratus_M_contig903:153317..1534361622932637.1779726-CDS-F-serratus_M_contig903:153317..153436Fucus serratus maleCDSF-serratus_M_contig903 153318..153436 -
1690964397.984707-CDS-F-serratus_M_contig903:153317..1534361690964397.984707-CDS-F-serratus_M_contig903:153317..153436Fucus serratus maleCDSF-serratus_M_contig903 153318..153436 -
1622932637.2006164-CDS-F-serratus_M_contig903:153820..1539311622932637.2006164-CDS-F-serratus_M_contig903:153820..153931Fucus serratus maleCDSF-serratus_M_contig903 153821..153931 -
1690964397.9948277-CDS-F-serratus_M_contig903:153820..1539311690964397.9948277-CDS-F-serratus_M_contig903:153820..153931Fucus serratus maleCDSF-serratus_M_contig903 153821..153931 -
1622932637.2150521-CDS-F-serratus_M_contig903:154348..1543881622932637.2150521-CDS-F-serratus_M_contig903:154348..154388Fucus serratus maleCDSF-serratus_M_contig903 154349..154388 -
1690964398.005246-CDS-F-serratus_M_contig903:154348..1543881690964398.005246-CDS-F-serratus_M_contig903:154348..154388Fucus serratus maleCDSF-serratus_M_contig903 154349..154388 -
1622932637.2286942-CDS-F-serratus_M_contig903:154979..1550451622932637.2286942-CDS-F-serratus_M_contig903:154979..155045Fucus serratus maleCDSF-serratus_M_contig903 154980..155045 -
1690964398.015489-CDS-F-serratus_M_contig903:154979..1550451690964398.015489-CDS-F-serratus_M_contig903:154979..155045Fucus serratus maleCDSF-serratus_M_contig903 154980..155045 -
1622932637.2420876-CDS-F-serratus_M_contig903:155945..1560941622932637.2420876-CDS-F-serratus_M_contig903:155945..156094Fucus serratus maleCDSF-serratus_M_contig903 155946..156094 -
1690964398.0253847-CDS-F-serratus_M_contig903:155945..1560941690964398.0253847-CDS-F-serratus_M_contig903:155945..156094Fucus serratus maleCDSF-serratus_M_contig903 155946..156094 -
1622932637.254595-CDS-F-serratus_M_contig903:161482..1617371622932637.254595-CDS-F-serratus_M_contig903:161482..161737Fucus serratus maleCDSF-serratus_M_contig903 161483..161737 -
1690964398.0350838-CDS-F-serratus_M_contig903:161482..1617371690964398.0350838-CDS-F-serratus_M_contig903:161482..161737Fucus serratus maleCDSF-serratus_M_contig903 161483..161737 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig903.20451.1

>prot_F-serratus_M_contig903.20451.1 ID=prot_F-serratus_M_contig903.20451.1|Name=mRNA_F-serratus_M_contig903.20451.1|organism=Fucus serratus male|type=polypeptide|length=377bp
MPCGSERLALFLLSASLPSSRGAFSRLQQHSAFSSFAATSSFLLGAASSA
TSRSAAATLEENAHGASRQYCAMSDGDFSSRSVDQVVLSRQQPEGMGAMV
RRSIGGGRLRNFDPFLLLDEFDVGPPAGFPDHPHRGFETVTYMLKGITEH
EDFCGHRGKIGPGSLQWMTAGRGIVHAEMPFGPDRGLGLQLWVNLKSKDK
MVEPAYQELNKEEIPTVTKDGVTAVVIAGEALGTSSPVYTRTPTHYIHFK
MEPNTELKQPIPSTMNSFLYVLEGKAAIGDGQGDKDQIDAHNTVTLTKEG
SGVTVKTFDSPADFVLISGEPTNEPVVQHGPFVMNTRQEIQQAMMDYQSN
SNGFENASKWYSQIGLPLTGADKRRR*
back to top

mRNA from alignment at F-serratus_M_contig903:149728..161925-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig903.20451.1 ID=mRNA_F-serratus_M_contig903.20451.1|Name=mRNA_F-serratus_M_contig903.20451.1|organism=Fucus serratus male|type=mRNA|length=12198bp|location=Sequence derived from alignment at F-serratus_M_contig903:149728..161925- (Fucus serratus male)
GAAAAAGTTTCCGCGGGAGGATTCAGTTGCTTCTATCGGTTCATTCGAAG CAATTGATATCTGCCGCCTGTGGTCCCGAAGACTTGCCTTATCGTCTGTA CATACTTTTGGTTCTTGTCACCCCCATATTCCCACTCCCCAAGCCACCAG GAGCACATCGATTCGAAGCCCGAGCAAGTGCTATTTTTATGCCTTGCGGG AGTGAAAGGCTCGCCCTGTTTCTGCTCTCCGCTTCCCTTCCTTCGTCCCG CGGCGCCTTCTCCCGTCTTCAGCAACACAGCGCCTTCAGTTCCTTTGCCG CCACATCTAGTTTCTTGCTAGGAGCAGCATCATCGGCAACATCCCGATCG GCCGCCGCGACGCTCGAAGAAAACGCTCACGGCGCTTCCCGACAGTATTG TGCCATGTCTGACGGAGATTTCTCCAGCCGATCGGTTGACCAGGTGTGCT GACTGTCGCTTCCCTGATGCTTCACTTTAGGTTAAGAACCTACCAGGTAC AATACAGTAAGGAGTACTGGCAATGTCTGCGTACTTGGTGCCGACAACAA AGTATTTAATGTAAACACAAGGATTGGCAACCATAACGGTTGAAGCCCAG TCTGTTGAACGTGTCTTGAGATATATTCCGCAAGCTCTATGGAAATGTTG GCTTCGATGCCGCGCATGCTAGCTGTGCACTGCAGCGGCTCTTCGCCACT GTATGGCGAATATTCAGAGTGGAAAAGTTTGCCGTGTCGGCAAAGGCAGC AGCACATGTGCCTCCTGACTACAGCTTTGTACATGCACACGGTTCTGTAA CGGTACATCTTTCCACGAACCTCGCATAATCTGTACTTTTAAAGAAAAAT CAGAACGTACTGTATGCGAGTGTGTGTGTCTGTTCTCATTTGTCAATCTG GCCTCAACCATGGTATACGCGGTTGTTTCAAGAAAAATCTAAACGCATCT AAAGAAAAATCTGAACGCATCTAAACCTTCTGAGCATACTACTGCTGTAC ACCCAAGATCAAGGGGGAAAGATGAACGTTGGGGTGGGAACTTAGGACAA AAACTCTTCATGGCATTTAATCGGGTTCCCCGATGGTAGTAGCATAGGGT CGCCAGCATAATATCGGGTAGAAACCCACCTTTATTCTGTACACTTCCTT GTGCACCAAAACATACGCACAAACGAATTACATAATGACAAGCTATAGTC TAGTCTAAAATGAAAAATGTACAAGTACGAGCACACTCCCAAGTGAGATG GGCATGTACGCGTCGATAAGGTAATGCGCGTTGACACAGTATCAGATAAA GTATGGAGTACGAGGCAGTACAGGTGAAGATTTAAGCGACATAGAGCTAG AGCTCAAAGCTAATCATAAAAAGTCTGAATTGATGTAGTGAGATTATTGG TGGAGGAGACCGTCGGAGCTACGGTATTCGAAGTATACTTGTTAAAATTA GGCACAACTATAATGTATTGTGGTCGTTGTTGTGTTTTCTTCCCATTCAT TCTGGACATCAAGTTTGTTGGACGTACCAGCCGGGCGGGGTCACACAGAA GGAAGGTCACATAGAAGGAAGGTCACACAGGATTTCTCATCCACCTTCCT TCTGCGGTGCGTGCCTCAATTTTTATCGCGAGAAGGATTCAGCCATTCCT TTCCCTCGTCGACCGTGAAGTCGAATTTTGTGTACTAACGATTCAATCGT TCTCCACTCGTTGGGCATTTTTATTTGTTTTTTTTTAGTTTTTAGTGAGA AAAATCGCGTTTGTCGGGATCGAACTAACGTCCGAACGCGTCAGAAGGTT ACGAGGTTACCTCTGAGCTACCTGAGCGACCGGTACGCTAGTTTAAGGCA TTAGTTCGAAAAAGCGTGAGTTCGAACCTCTTGATCATGACAATTTTTTA GAGTACACTGGTCGCTCCGGTGGTTCAGTTGGTAACCTCGAAACCTTCTG ACGTTAGGACGTGAGTTCAAATCTGAGTGTAGTCACACGAACTGGGAATT TTCCTCATCATGCCCAACAAGCGGAGAACGATTAATTTGTGGGTACACAA AATTCGACTTCACGGTCGACGACGGAAAGGGACAGCTGAATCCTTCTCGC AATCAAAATCAAGGCAAGCACCGCAGAAGGGAGGTGGAGAAATCCTGTGT GGCCTTCCTCCTGTGTGACCTCCCCCCTGTGTGACCCCGGCTGGTGCGTC CACAAGTCTGACGTCTAGAATAAATGGGATGACAACACAAACACACAAAC ACAAACAAACACACACACACACGCATACACACACACACAAGTATCATTGA TCCCCCCTCGGGAGGATCAATGCGAGTGGCATAGAATGACTAGGATGACA GGGCCGGATTGCGTGGTTATGTGCAATTTCATAAATACACACACACACAT AGTTAGCTTCAGGTAAAAGTTGTTAAAATATAAATCTGAACGTATCTAAA ACTCCTGAGCATCCCGCCGACAGGGAAAAAATCTCAAAAGATTTAGGGGG GAACATATGGTATTTAGTCGGGTTCCCTAGTGGTTACCGTCACTTTCCAT ATGCCCACTTCATACCATTAGTGGGTGTGGGAAAGAGAAGCGTATATTAA TTGGTCCATGATGACCTGCCAAGGCAGCACTCGTTCGGAACTACCTTGAG TTTTACTGGCTCTGTGCCGGCGGACTCTCGGCAGTGAAAGCCGTCGGTAC GCAATTGCGTGACCCGATAAACTCAGGACTGACCCGATGGCGTATGGTGG TTTGAATAAATAAATGGACGCCGCCGCGGAACCCGGGAGAAGTCCCTTAA GTAAGCACCAGATTCAGCCTGATTATGGAGATGAACAGGCTGACGCGGGA CGGGACTGCTGAACCCGTCTCGCAAGACCAAATTCTCAGGCGCGAACGCG GACAGGGAAATATTATGTTTCCCTGTTCAGCTGACCACATGCAGGATTGG CAACCTTACCCGGTTGATCCATACTCTTGCTACATGTATGTATGTATGTA TGTATGTATGTATATTTCTTAAATTGCACATAACCGCGCAATCCGGCCCT GTCATCCTAGTCATTCTATGCCACTCGTATTGATCCTCCCAAGGGGGGAT CAATGAAACTTATTACTATGTACGTATGTATGTATGTATGTATATTTATT AAATTGCACATAACCGCGCAATCCGGCCCTGTCATCCTAGTCATTCTATG CCACTCGTATTGATCCTCCCAAGGGGGGATCAATGAATGTATGTATGTAT GTATGTATGTATGTATGTATGTATGGTGATCACATGTAGCAAGAGTATGG ATCAACCGGGTAAGGTTGCCAATCCTGCTCATGGTCAGCTGAACAGGGAA AATGAATATTTCCCTGTCCCCGTGCGTGCCTGACAATTTGGTCTTGCCAT ACGGGTTCATCCGTCCCGTCCCGCGTCAGCCTGCTCATCTCCATACTCAG GCTGAATCTGGTACTTACTTAAGGGACTCCTCCCGAGTTCCGCGGCGGCG TCCATTTATTTATTCAAACCACCATACGCCATCGGGTCAGTCCTGAGTTT ATCGGGTCACGCAATTGCGTACTGACGGCCTTTACTGCCGAGAGTCCGCC GGCACAGGGCCAGTAAAACTCAAGGTAGTTCCGAACGGGTGCTGCCTCGG CAGGTCACCATGGACCAATTCATATTCGCCTCTCTTTCTCACACCCACTA TTGGTATGAAGTGGGCATGTTGAAAAACCGGCTATGTATTTATGTATGGT CATCACATATAGGAGAGTACGGATCAACTGGGTAAGGTTGCCAATCCTGC TCGTGGTCAGCTGAACAGGAAAAACCAATATTCCCCTTTCCGCGTTCGTG CCTGAGAATTTGGTCTCGCGAAACGGGTTCGGCAGTCCCGGCTCGCGTCA GCCTGCTCATCTCCATACTCAGGCTGAATCTGGTGCCTACTTACGCGGTT CCTCCCGAGTTCCGCGGCGGCGTCCATATATTTATTTTGAACCGCCATAC GCCATCGGGTCACTCCCAAGTTTATCGGGTCGCGCAACTGCGTACCGATG GCCTTCACTACCGGGAGTCCGCCGGCACAGGGCCAGTAAACCTCAAGGTA GTTCCGAATAGGTGCTACCTTGGCAGGTCACCATGGAGCAATTAATATTC GCCTCTCGTGACCGTACATACATACATGGTGGTAACATAGGGTCAAAAAT ATAATGTCGGGGAGAAAGAAGCCCACCGTTATACTGTACACTTTCAATAA TCGCCATTCAGGGATACCAAAACAGAGGAAGATGAAAACCTGGAAACAGC TCAATTTTGTTACAGTACATTGGGTCTGGGATCGGATGGGTGTCAGCACC TATTAATATAGTATTATATTACCATATTATTAGCCATCAAACAAATTGTA GATTGACAAGTCTAGGGGACAAGGTTTTGCTTTCTTATAACTGTTCAAAG AAAAATCTGAACGCATCCAGCTAGACCTTATGAGCATCATCATCGCCCAG TCAAGGGGAAACATGTCAAAACGTTTAGGCGGGATCATAGGCTGCAAATA AAAACCTGTTCGTGGCATTCAAACGGGTTCCCCGATGGTAGTAGCTCGTC GCCCGAGTGGTCTACTTCGTAGTAGGTAACCTGCACACCCGGTATTAATA GTGCGGAAGTCGTGAGTTGGATTCTTAGCTTAATCAGAATTTGTGTTCTT TCTTTCGTAACGGAAAGCGTGGGAACGTGAGTAAGTAAAATTCAACCTTT GGTTGACGTGTGGTAAGATTGCTGAACTTGCATCGCGATAAAAAGTTGTA AGGCGTGAACCGGGGAGAGATGGGAAGATCCTTAGTGACCACAGACAGGA TGGTGATGAGGTCCATCGGCTATAAGTGAGATAAAAAAAAAGAAGTAACA TTGGGTTTTTGTTTCACACATTCAGCTTATTTTTCGCTTGCAACTGAAGA AACTACGGCGAATTCTAATTCTGTAAGTGTTCTGCTGGGCAGGAAAAGAT CGGGAAAAGCTCCAACGCCAACGAGAGCATAAAAACTAACAAAAACGACA TGAAAGAACGAGAAAAACTAGAAAGCAAATACCAAAGAGGATAAAAAGGA CGCAGAGAGGCGCAAGGGGCCCATGCCATGCTTTTTATTCTATTGATAGC GGCCAATGTTCCCCCACCTTAACATTTCGATACAATTCCCCCTCGATGGT GGAGGTGCTCGGAATATCTAGCTAGATGCGTTAGTTAATAGTTCATACTA TTAATAGTATGTTTCTATGCACAATTGCTTCAAACAGGCCAAGGCATACT GTAGAACCCAGAAATCAAGGCGGCATTCACGCCGCAGCAGGGTGGCTGTT TGGGGTTGGGCCGCGCTAATCCCCCGAGCCTTCCGGAAATATAGGCACAG GTCTAGCTTTTGAGCTCTGGCCAGTACAGCGCTGGAAAATATTACGTCTG GGGCCATACCTATAGACTAATGTAACTGATACTGTGGCCATAGTATAAAT ATTGTAGTACCTCAAACTTCTTGGAGCCTCCTAATTTATGGTTGAGATCA TTTTTCAGAAATTATTGTTCGCGATCTTGCAGGAACACGATCAGTCTATC GCGTCACGAAGTCAATACCTTGCCGTTCGGGACTTGATTTGACAGGGTAG AGGTTCCCATGAGCTTTGGTTGGGACAGACACGTAGCTGTATCCTGGCAC ACTTTTTTAATGTCCTAGCATCATTTCTGACAACTCTGCAACTCCTGTGT AGGCACCTTGCGAAATCAACTAGTTGAGTATTTTTTGCTCAAAGTTCCTT CCGTTTCTCTTCACCCCTTTTGCTGTATCAGGTGGTCCTTTCCAGGCAGC AGCCGGAGGGGATGGGAGCCATGGTTCGCCGAAGCATCGGAGGCGGTCGC CTTCGCAATTTCGACCCTTTCCTGCTGCTCGACGAGTTTGACGTCGGACC GCCGGCGGGCTTCCCTGACCACCCTCACAGGCGAGAGGACGTCGCGCAAC GCCAAGGCGCCTCCGGGTGATAGGAATAGAGAACTTGGAGGTTGGAACAT TCCCAGCGTGCGTGGTGGTGGATAGGCTCTATCCCATAGACGTGCAGATC CTTCCGTATGCCATGAAGAGGTTTTGTATTTGCAGCCTTTGATCCGACCT AAACGTTCTGACATTTCCCCCCCCTGACTGGGGGATGCTCAGAAGGTCTC GGTACGTTCTGTATTTTCTTTAAACACGCGAAATACTCGCGTTTAATGCG CGCAGTACCATCAAGTGATTTTTAACCCTCAATGGGGTTTACGCGCCAAA AACTGTAAAAAGGCACATAACCGTTTTTTTTTTCAATCGCTTTGGCGTTC AGATCTTATGATTTAGTAAAAACGCGTCATGAGAAGCCTGTCTCCGCGCT CGTTTTATATCGCTTTATGCGCCAGCTCCCCAAACTATCTCAGCCGCATG TGCAGTTGACCTCGTGCAGCTTTCCGTGTGGAGCTCCACCTCCGTGACGG TCTACCGGTAAACAGTACAGTAGACCGTCTTGATCGGAGAAAACGCCCCC CTCCTCCCACTTTTGTATTGATTATGGAGACAGACCCTATACGTGGCAGT GAAAATATCCCCAAAAATATCTTGAGCAACTGTGCACTCTGCGATCCAGA GAAAAGTATTGGGGGCAGGAGGGGAGGGGTCCCCCGGGGGGGCGTTCTCT CCTAACATTACCGCTATTGATGCCCGGCAGCAGTACTGCGATAACAGTGG TATCAATCTCAAAACTAATGTACTCACCTTCTCACCTGTACGCCCTATCG ACAAAGGCAAGAGCTACCAGATGTACACCCGTTTTGATCCGTTTTTTTGT CGCGGTGCGCTTTTCTCGACCACGCGGCAGGGGTTTTGAGACGGTGACTT ACATGCTGAAGGGTATTACAGAGCACGAAGACTTTTGCGGCCACAGGTGA CGACGGTCTCGTATTTATCCGCCTTGGAGCGAAACGTAGGTACTGATTGA TACCCGGAGCGTTGCACGCCGGCTGCCGTTGGTCTATACGAGGTTCGTAC CGGAAGGGGCGTGTACCTTCGTAGGCACCAGACTTGAACTGAACAGTGCT TGAAGTAGGAGTAGGATTTCTCAGATGTTGCTCGCAGGGCGGCGGTCACT TGCGGCCCCGGCGTTCTTTTTCCTTATACTGACAGCCCACTTATAATATA CGTATGTATATAACACAACTGCTGGATTCGCCCTGGCCTACTTGGTGAAT AAGTGCAAGGAAGCTTTGCTTCGAGCGAGGTAGCCCGCGACGGACAGAAG TCGTCGCTCTCCGGGCAAGATGCCCTCTCGGATAAGGCCGACCTCAGACA ATGTATTCGACTTTTTTTTGTCAAACTCTGTATCTCACCTTCGACTGCCC CCATCGATGGCCTTTCGTATATCCTTGGCCGTCCCGCCGAAAACGGACGC GTCATCATGCCAATGGACGCCTCTGGCATGTGGTGCTGCTGCCGTTGCCT GGACGCCATGTCGGTATGAAACGCGGTCGCTTCGCAGGGGCAAGATTGGC CCTGGCAGCTTGCAATGGATGACGGCGGTGAGGCTCAAAAGGCAATGTTT GGTTGCTTTTGTCTCGGTTTAAGCTTTGGCTCGGTTTTGGCAGCCTCCAG GCCTGTGCAGAGTAAAATATTGCCTTCGAGGCATCCTCTACCTACCAAGG AGCGCGTATCCTCGACCTACGCTCACACTCCGGGGGTTTCCCTCCAGCGC TGCAGCGTACGATGTTCTTGGGCGTAACCTTGACGTCGGCTGACAGTCGC AACTCTGAAGATCTACCACGCTCGGTTGGTGCGATCTTGTCGTTGGTCTT TGGTCTACACCTTGTAAAGCACCATAGAATGAAAAAAATCCCCGTCGACA GCGTCACCTAAACGAGAGAATCCGACGGGGGATCGATCATACCCGTAGAC CTCTACACAACCCTCCCAACCCCCTTCTCGTTCTCGTTCTACAGGGCAGG GGCATCGTGCACGCCGAGATGCCGTTTGGACCGGACCGCGGCTTGGGCCT TCAGCTCTGGGTGAACCTCAAGAGCAAAGACAAGATGGTGGAGCCAGCCT ACCAGGTTATTATAGCCAAGGGCAGCAGCAGTTGTGATGGTTTTGGCGTG TCGTCATTCGTGATCCAGGCACGGCGTTGGCTGTTTCAAACTGCTGTTAC AGCTGCTGTTACTGCTGCTGCGGCACCTACTGTATGTGTGTGTGCATACG TGTGCCTGCTATATCCGAAACGCTCCGGGGGATGAAACTGTATCCAAAAC GGTAAAATAGCTCTAAATCCGTGGTCGCCACCTGTGTAACCTACTTCTCA GCGTGTTCGCAAAGACCGTTTTAGAGCGCGTTCGGCGGCAGTTTTCCTCG AGGCAGCTCGTTATTTCTCTGCCAGCCTGGCCCACGCAGCGTGGATCCCG CACCCATCCCCCCGCCCTCTCCTCGGGCTACTCTATCAGGAGCTGAACAA GGAGGAAATTCCCACCGTGACCAAGGACGGAGTGACTGCCGTGGTCATCG CCGGAGAAGCTCTTGGTACTTCCTCCCCTGTTTACACGCGAACACCCACA CACTACATGTAAGCACTATTATATAATAGCATGTAAGCATAATTGGACTT GTGACTACTTTAAGTGTGATCATTGTACATGTGACCACCACCTGTAAATG CGCCCCCTTTCAATGTTAGGACAACGGCGCGGAAGTGTCCTCTCAGAGAG TTGGTATTTTTTAAGTGAGTCTACGGTTCTCGTGATTGTGAGAGAACAAG CTGGATTGCTACCGTAGGAAATCGTTGCCTACCCTCGCATACAGCAGTAC CGCGAATGCCTTACAAAAATGTTATAGCTCGCCATATGCAGGCGCCTCAC GATGGGTTTTCTCCCTTGGGGAACATGGGGTGTCAGTTCCTAGGTTCTCC GCGACGGGAGCATTGCGCCCCGTCACGCGTGTGAATGTTCACCTTGTTGG CTGTAGCTCCTTGATCGCCCGGATAGACGCCGCAAATTGTCTTACGCCAC CCGCGCACATGTCGATTTTTTTCATGAGTTTTACCTTCTTTTTTTTTTCG ATGCGGCACGCGACCGTGATCTTATTTCCTTCCGTGGTTTGGTTTGGCTT CGCCTCCCGCAGCCACTTCAAGATGGAGCCCAACACCGAGCTCAAGCAGC CCATCCCGAGCGTGAGTGGCAGCAGTGCATTTCGTGTCTTGAGGGGAATG ACCCCGAGTTGACGACCTATCGTCGATGCCGTGGTGTGACGAGTGTGGTT TATGCGCGATGCGCAGTCGAGCGCAAGCACGACAATGCGATTAATCCCAC CGACCCATCCATAATCTACAGATAGTCGTCGACCTTCGGGTTCACGCCCC TACGCCGACGAGCTCTTGGTTTAACAATAATCGCGCGTCTTGATTTCGAT AGCTTCGGCTCGTGACCCGTCGAGCTCGCAGAGGTGTACCGCTTTGCAAG CGAAGACGAGTAGTGGTTGATAAATACCCCGACAAATGGGGGGTTGATTA CATAACGTATGAAATTATGCATGCAGTGTTATCTCGACCCCATCCATCAG TTTGTCCGGTACTGTTGTACGTGACCCTAGAAAATGTGGCTCTATACCCC CACGATCATTAATTACAAAAGCACGTTAGTCTCAACAGCGAGCAAAAACA AAAAGGATGTCTTGAGTGTGCTCTCCAAAATAGTTCGTCGTCGTCCGAAT CCGGCTATAGTAGTAGGAATAGAGCTAGTGTTGTGGGATGTGCAGGCTAT ACATAGATCCCGCAACGATGTCTCCCGCCAACCCTCCACACTTTTCCCTT TCGGCCGCATCTTGGCTGCATGTCTCCACCGATCCCTTGCGACAGACAAT GAACAGCTTCCTTTACGTGCTTGAGGGCAAGGCGGCGATTGGCGATGGCC AGGGCGATAAGGACCAGATCGACGCGCATAACACTGTTACCCTTACAAAG GTACAACAGCAAGCTAGATAGTAAAGTTCGCTAAACTGCCCTCCGTGCCA CGCCCGTGGGAAAGCTCCCATCGATAATTCGCGCTGCTGCTGTAGAGGCG ACGCTTCTCAAGCGAAGCAACGCTTGGTACGGTGGTCGCCTTGCACCGGT ACCGCGCACGGTACTACCATCTGAAACGCAAAGCGTAATTCACTTTTTCG CCCTTGCGTTGATGTTTTTTTTCAAATTATTCTCCTTTTTTTGGCAGCAA TGCCTCTTGCTTTTTGTAGTGATAGGTGCTCCAACGAGCGTCCCCTTTTT CTTCGCGGAGGGGCGCGAGTGGCACAATTTGTATACACCACAGTATGTGG AAATACGTATCCGTCCGACAGACCCTTCGGGACAACGCAAATTTAGAGCT ACCGCATCAAGAGTATGCGCGAAATCATATGGTTCCAAGCTAAGAACTTT GCCGCTCGCAATGATTGAAATTATGGCCGCACCTGCAGGAGAACCCTCTC ACCCCCCCTCCCCAAACCCCTTCAACTTTCAAAATGTATCAAAAATGAAA TATTATTGCTTCCACGTTTTTCTCAGGAGGGATCTGGTGTGACCGTGAAG ACCTTCGACTCCCCCGCGGATTTCGTGCTCATAAGCGGCGAGCCCACCAA CGAGCCCGTCGTCCAGCATGGGCCTTTCGTCATGAACACTCGCCAGGTAT CCTACTCAAGTCGGTACTATAAACCGCACCGTGCTGAGCCTAACCGTCGG TACTGTAGAGCATTCGAGTCGTTGGAAGATTGTAGCTTGTGTTAAACACT ACATTTCATCGTGGCTCATTTGTCCCCTATCCTATAACCTTTAGTGAGTG GAGTTTTGCTTCCGTCACTGTGTAAGTCCACCGGATTTAGTCCGAGAACC CCCTTCTCGGGGTCAATATACGGCATATCTACGGAAGCAATGGCATGCGG TAAGAAGTGCCCCAGACCATTTACAATTCTTCTCTTTTCCGCCCTCTCTC TTCGTCGGGACGAATTACCCCGGCAGACACCGGCTTGGAATTACTATAAA GCTAACCTCTCAACCTGCCCTACAAAAAGTGTCTAATAAAAAAATAATTT GGATTGTTTTTTTATGTTTTGTTTTATTTTTGCGTTTCGGTACACGCGCC TACACGTCCGGCCGTGGACTCTGCTGGCGCTTTCTCTACAGGAAATCCAG CAAGCGATGATGGACTACCAGAGCAATTCGAACGGTTTCGAGAACGCCTC TAAATGGTACTCCCAGATCGGTTTGCCCCTCACGGGCGCGGATAAGAGGA GACGTTGATATGCGCTGTCACGGAAGGGAAGCCGCTCTTTTAGTGAGACG CTGATACTCGTAGGTAGTCGACGGAGGAGTTGTTCGATTCAACTTGCGAT CCTTGCAGCAACGGCTACAGTTGTACGTTATTGTGTTAATACGTGTTCGA TTTTTTGGAGGACAGTGGACGACAAGTGTTTGTCCCTGTGTGAGAGGAGG ATTCCGGTAGTTTTTAGTAACCTTGTAACTGTAAGGGGGAAGGGGGAGGG GATCGCTACCATCGCATCGATCTGAGAGAAATTGTCTATTGTGAGTGTCC CGTGAGTTTCTTGTCGTTTGGGATGAAAGCTCGTGTCATGTGAAGGCTTC ACATCCTGATCGATGACGGTCGTCAGGTGTACCGCTGCGGAGAACCTGAG GTAGAGTTGTAAAGGTACTTCACGTACACTGTAGCCGGGCATTCAAACAG CTTTTGCTTTTTCGATGAGGGTTTGGTAGCCTAGGCTGTGCGAAGAGCAT TCGATCATTTAGAGGAGCTCCGCATACGTTATGTATCAGGTACCTTCGCG TCTGTGTATACCCCAAAGAAAGGTTGAGGGGTTACTCGGTATCTCAGATT TTGCTGCAACAGGCTCTCGTGTCCGTCATAGACGAAAACACAACTGCAGT ACTGTAGTGGTTGCAGAGATCTTTGTAAATTGTAAAGTAAAGTAACCAAA ACTGTAAAATGATGCTTCGGTTTGGGGTGCTTGCTCCACACAGATATGAT TAATCTTGTGCACACGAAAAACTGTGTCAGGTTCGCCGATACTACTGATT TTTTTTCTAGTTCCCCGATGCGCCGATGAAACCGTTCGACGTACCAGGTT GAGGCCAACTAATCTACGTGTGGGTACAGTGCCAACGCTGCCAATCCA
back to top

Coding sequence (CDS) from alignment at F-serratus_M_contig903:149728..161925-

>mRNA_F-serratus_M_contig903.20451.1 ID=mRNA_F-serratus_M_contig903.20451.1|Name=mRNA_F-serratus_M_contig903.20451.1|organism=Fucus serratus male|type=CDS|length=2262bp|location=Sequence derived from alignment at F-serratus_M_contig903:149728..161925- (Fucus serratus male)
ATGCCTTGCGGGAGTGAAAGGCTCGCCCTGTTTCTGCTCTCCGCTTCCCT
TCCTTCGTCCCGCGGCGCCTTCTCCCGTCTTCAGCAACACAGCGCCTTCA
GTTCCTTTGCCGCCACATCTAGTTTCTTGCTAGGAGCAGCATCATCGGCA
ACATCCCGATCGGCCGCCGCGACGCTCGAAGAAAACGCTCACGGCGCTTC
CCGACAGTATTGTGCCATGTCTGACGGAGATTTCTCCAGCCGATCGGTTG
ACCAGATGCCTTGCGGGAGTGAAAGGCTCGCCCTGTTTCTGCTCTCCGCT
TCCCTTCCTTCGTCCCGCGGCGCCTTCTCCCGTCTTCAGCAACACAGCGC
CTTCAGTTCCTTTGCCGCCACATCTAGTTTCTTGCTAGGAGCAGCATCAT
CGGCAACATCCCGATCGGCCGCCGCGACGCTCGAAGAAAACGCTCACGGC
GCTTCCCGACAGTATTGTGCCATGTCTGACGGAGATTTCTCCAGCCGATC
GGTTGACCAGGTGGTCCTTTCCAGGCAGCAGCCGGAGGGGATGGGAGCCA
TGGTTCGCCGAAGCATCGGAGGCGGTCGCCTTCGCAATTTCGACCCTTTC
CTGCTGCTCGACGAGTTTGACGTCGGACCGCCGGCGGGCTTCCCTGACCA
CCCTCACAGGTGGTCCTTTCCAGGCAGCAGCCGGAGGGGATGGGAGCCAT
GGTTCGCCGAAGCATCGGAGGCGGTCGCCTTCGCAATTTCGACCCTTTCC
TGCTGCTCGACGAGTTTGACGTCGGACCGCCGGCGGGCTTCCCTGACCAC
CCTCACAGGGGTTTTGAGACGGTGACTTACATGCTGAAGGGTATTACAGA
GCACGAAGACTTTTGCGGCCACAGGGGTTTTGAGACGGTGACTTACATGC
TGAAGGGTATTACAGAGCACGAAGACTTTTGCGGCCACAGGGGCAAGATT
GGCCCTGGCAGCTTGCAATGGATGACGGCGGGGCAAGATTGGCCCTGGCA
GCTTGCAATGGATGACGGCGGGCAGGGGCATCGTGCACGCCGAGATGCCG
TTTGGACCGGACCGCGGCTTGGGCCTTCAGCTCTGGGTGAACCTCAAGAG
CAAAGACAAGATGGTGGAGCCAGCCTACCAGGGCAGGGGCATCGTGCACG
CCGAGATGCCGTTTGGACCGGACCGCGGCTTGGGCCTTCAGCTCTGGGTG
AACCTCAAGAGCAAAGACAAGATGGTGGAGCCAGCCTACCAGGAGCTGAA
CAAGGAGGAAATTCCCACCGTGACCAAGGACGGAGTGACTGCCGTGGTCA
TCGCCGGAGAAGCTCTTGGTACTTCCTCCCCTGTTTACACGCGAACACCC
ACACACTACATGAGCTGAACAAGGAGGAAATTCCCACCGTGACCAAGGAC
GGAGTGACTGCCGTGGTCATCGCCGGAGAAGCTCTTGGTACTTCCTCCCC
TGTTTACACGCGAACACCCACACACTACATCCACTTCAAGATGGAGCCCA
ACACCGAGCTCAAGCAGCCCATCCCGAGCCCACTTCAAGATGGAGCCCAA
CACCGAGCTCAAGCAGCCCATCCCGAGCACAATGAACAGCTTCCTTTACG
TGCTTGAGGGCAAGGCGGCGATTGGCGATGGCCAGGGCGATAAGGACCAG
ATCGACGCGCATAACACTGTTACCCTTACAAAGACAATGAACAGCTTCCT
TTACGTGCTTGAGGGCAAGGCGGCGATTGGCGATGGCCAGGGCGATAAGG
ACCAGATCGACGCGCATAACACTGTTACCCTTACAAAGGAGGGATCTGGT
GTGACCGTGAAGACCTTCGACTCCCCCGCGGATTTCGTGCTCATAAGCGG
CGAGCCCACCAACGAGCCCGTCGTCCAGCATGGGCCTTTCGTCATGAACA
CTCGCCAGGAGGGATCTGGTGTGACCGTGAAGACCTTCGACTCCCCCGCG
GATTTCGTGCTCATAAGCGGCGAGCCCACCAACGAGCCCGTCGTCCAGCA
TGGGCCTTTCGTCATGAACACTCGCCAGGAAATCCAGCAAGCGATGATGG
ACTACCAGAGCAATTCGAACGGTTTCGAGAACGCCTCTAAATGGTACTCC
CAGATCGGTTTGCCCCTCACGGGCGCGGATAAGAGGAGACGTTGAGAAAT
CCAGCAAGCGATGATGGACTACCAGAGCAATTCGAACGGTTTCGAGAACG
CCTCTAAATGGTACTCCCAGATCGGTTTGCCCCTCACGGGCGCGGATAAG
AGGAGACGTTGA
back to top