mRNA_F-serratus_M_contig902.20439.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig902.20439.1
Unique NamemRNA_F-serratus_M_contig902.20439.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig902.20439.1 vs. uniprot
Match: D7FHX3_ECTSI (RTP1_C1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHX3_ECTSI)

HSP 1 Score: 367 bits (942), Expect = 2.380e-110
Identity = 246/525 (46.86%), Postives = 290/525 (55.24%), Query Frame = 1
Query:    1 MEAHLRKITRCLGKAVAELEQVSTSEKFAHPIAPHSIGQVDAEWIARFHAGITVPVPPDNDSFAKEE---NDSHLASRNGEDGVGRTDLSRWEFLESKWLPLLRDLHRTVSALDREEGEIQKAENARSSKEKEACSGSEDAAGEAAHHGVPGRRGAAP-------PPRPPKGLLSLRDYTVVHAALEIVVHWGLAPVLEPGLGSFDFDKRPRSRAVKISRRVLQYWKK------------PRQRPEFAG------SSRLAAKDSEPAPSLSAEGSVNHPSLGTGRARAQLALCVKAIQGVVTTDQFLPMLLPLYLPDLLAARLQLVYGRGAAVGSPLDERGCRRRDRSTAPAGMR--------GDVGTTLMFPPSATTGGSRAERQPMGEALQNLLRDLGPRQIMGALRQLLSEGARTPSWLRHHGGRMLSEIVLRPGGVQATLEVYLAGAWAAGGGGSADGGESGKWTEGDGLKACQRVAKLLATPPKRVLPGEYVSRVAPQLAGMLHYDGQQKALITRQVPRV 1467
            ME HLRKITRCLG+AVAELE+VS SEK A+        Q+D EW+ARF AGI VP P +    A+ +    +   AS      V   DL RW FL++KWLPLL+DL+RTV  LDREE  +Q  E                                         PPRPPKGLLSLRDYTV+HAALE+VVHWGL PVLE G+G F+ DKRPRSRAVKISRRVL YW              PR+RP  +       ++R AAK +        EG           A AQLALC + +QGVVT+ QF+PML+PLYLPDLLAARLQLV+GR A                  +   +R        G   T     P                     + + GPRQ+MGALR LLS+G+R P W R   GR+LSEIVLRPGGVQATLEVYLAGA                    +G+KAC RVAKLLATPPKRV  G YVSRVAPQLA MLH+DGQQ+A++TR V  +
Sbjct:    1 MEGHLRKITRCLGRAVAELERVSASEKIANE-------QLDEEWMARFFAGIAVPAPSEATQGAEAQAGFGEQQTAS------VAEKDL-RWTFLKTKWLPLLQDLYRTVGVLDREESALQALEQKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPRPPKGLLSLRDYTVIHAALEVVVHWGLVPVLEAGVGVFEADKRPRSRAVKISRRVLHYWSAEKRHVTGDGPSPPRRRPNASSPCGDPVATRPAAKPA----GCCGEGDATARGAD---AYAQLALCTEVVQGVVTSGQFMPMLMPLYLPDLLAARLQLVFGRTAVATXXXXXXXXXXXXTPASALTVRDNDGDERAGATATVADGEPXXXXXXXXXXXXXXXXXXXAAVTNAGPRQVMGALRYLLSQGSRAPPWFRQRAGRILSEIVLRPGGVQATLEVYLAGAXXXXX-------XXXXXXXXEGMKACLRVAKLLATPPKRVASGVYVSRVAPQLAEMLHFDGQQRAIVTRVVAMI 497          
BLAST of mRNA_F-serratus_M_contig902.20439.1 vs. uniprot
Match: A0A6H5JPL2_9PHAE (RTP1_C1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPL2_9PHAE)

HSP 1 Score: 348 bits (893), Expect = 1.200e-103
Identity = 246/559 (44.01%), Postives = 291/559 (52.06%), Query Frame = 1
Query:    1 MEAHLRKITRCLGKAVAELEQVSTSEKFAHPIAPHSIGQVDAEWIARFHAGITVPVPPDNDSFAKEE---NDSHLASRNGEDGVGRTDLSRWEFLESKWLPLLRDLHRTVSALDREEGEIQKAENARSSKEKEACSGSEDAAGEAAHHGVPGRRGAAPPP-------RPPKGLLSLRDYTVVHAALEIVVHWGLAPVLEPGLGSFDFDKRPRSRAVKISRRVLQYWKK------------PRQRPEFAGS--SRLAAKDSEPAPSLSAEGSVNHPSLGTGRARAQLALCVKAIQGVVTTDQFLPMLLPLYLPDLLAARLQLVYGRGAAVGSPLD--------------------------------------------ERGCRRRDRSTAPAGMRGDVGTTLMFPPSATTGGSRAERQPMG--EALQNLLRDLGPRQIMGALRQLLSEGARTPSWLRHHGGRMLSEIVLRPGGVQATLEVYLAGAWAAGGGGSADGGESGKWTEGDGLKACQRVAKLLATPPKRVLPGEYVSRVAPQLAGMLHYDGQQKALITRQVPRV 1467
            ME HLRKITRCLG+AV ELE+VS SEK A+          +A  + R    I VP P D    A+ +    +   AS      VG+ DL RW FL++KWLPLL+DL+RTV  LDREE  +Q  E                                           RPPKGLLSLRDYTV+HAALE+VVHWGL PVLE G+G F+ DKRPRSRAVKISRRVL YW              PR+RP  + S    +A   +        EG       G   A AQLALC + +QGVVT+ QF+PML+PLYLPDLLAARLQLV+GR A   +                                               E    RR          G+ GT            S A   P+     L+ +++D GPRQ+MGALR LLS+GAR P WLR   GR+LSEIVLRPGGVQATLEVYLAGA                    +G+KAC RVAKLLATPPKRV  G YVSRVAPQLA MLH+DGQQ+A++TR V  +
Sbjct:    1 MEGHLRKITRCLGRAVTELERVSASEKIAN----------EARILLRGRQRIAVPAPSDATQGAEAQASFGEQETAS------VGQKDL-RWTFLKTKWLPLLQDLYRTVGVLDREESALQALEQKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPPKGLLSLRDYTVIHAALEVVVHWGLVPVLEAGVGVFEADKRPRSRAVKISRRVLHYWSAEKRRVTGDGPSPPRRRPNASSSCGDPVATWPAAKPARCCGEGDAT---AGGADAYAQLALCAEVVQGVVTSGQFMPMLMPLYLPDLLAARLQLVFGRTAVAMAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPAEGDRHRRXXXXXXVTSEGETGTA-----------SAAAHSPLSMMPPLRAMVQDAGPRQVMGALRHLLSQGARAPPWLRQRAGRILSEIVLRPGGVQATLEVYLAGAXXXXX-------XXXXXXXXEGMKACLRVAKLLATPPKRVASGVYVSRVAPQLAEMLHFDGQQRAIVTRVVAMI 521          
BLAST of mRNA_F-serratus_M_contig902.20439.1 vs. uniprot
Match: A0A835YW23_9STRA (RTP1_C1 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YW23_9STRA)

HSP 1 Score: 98.6 bits (244), Expect = 5.320e-18
Identity = 80/236 (33.90%), Postives = 111/236 (47.03%), Query Frame = 1
Query:  469 PRPPKGLLSLRDYTVVHAALEIVVHWGLAPVLEPGLGSFDFDKRPRSRAVKISRRVLQYWKKPRQRPEFAGSSRLAAKDSEPAPSLSAEGSVNHPSLGTGRARAQLALCVKAIQGVVTTDQFLPMLLPLYLPDLLAARLQLVYGRGAAVGSPLDERGCRRRDRSTAPAGMRGDVGTTLMFPPSATTGGSRAERQPMGEALQNLLR-DLGPRQIMGALRQLLSEGARTPSWLRHHGG 1173
            P+ P+GLLSLRDY+ VH ALE++V+W + P +EPG+G FD + RP ++AVK+ RR+L +           G S  + K                  + T  A AQL   +  +Q ++  DQF PMLLP YL D+LA  LQ+ YG    +             RSTA + +  D  T  + P           R  MG   Q L R D  PR +          GART + ++  GG
Sbjct:  118 PKAPRGLLSLRDYSAVHTALELLVYWAIIPAVEPGVGPFDPETRPPAKAVKVHRRLLLW-----------GLSYASKKG-----------------MVTQEAVAQLLAVLGVMQRLLMLDQFAPMLLPRYLADVLAGLLQVAYGFNTDL-------------RSTAQSAL--DALTAALNP-----------RLTMGSLRQLLSRGDAAPRWLRA------HAGARTTALVQRPGG 293          
BLAST of mRNA_F-serratus_M_contig902.20439.1 vs. uniprot
Match: W4FLD8_9STRA (RTP1_C1 domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FLD8_9STRA)

HSP 1 Score: 73.6 bits (179), Expect = 4.240e-10
Identity = 89/318 (27.99%), Postives = 133/318 (41.82%), Query Frame = 1
Query:  469 PRPPKGLLSLRDYTVVHAALEIVVHWGLAPVLEPGLGSFDFDKRPRSRAVKISRRVLQYWKKPRQRPEFAGSSRLAAKDSEPAPSLSAEGSVNHPSLGTGRARAQLALCVKAIQGVVTTDQFLPMLLPLYLPDLLAARLQLVYGRGAAVGSPLDERGCRRRDRSTAPAGMRGDVGTTLMFPPSATTGGSRAERQPMGEALQNLLRDLGPRQIMGALRQLLSEGARTPSWLRHHGGRMLSEIVLRPGGVQATLEVYLAGAWAAGGGGSADGGESGKWTEGDGLKACQRVAKLLATPPKRVLPGEYVSRVAPQLAGMLHY 1422
            PR P  LLSLRDYT V AA+E+++ WG  P +E G+ +    +R  ++  KI R ++Q+               +A  +S P+                    A L   ++ +  V+   QF PMLLP YL DLLA    LVY R     SP                            PP+A               LQ L+  L  R  MG+LR +L+      ++ +   G +LS+ VL+ GGV AT+E+ L+         S D G +         +A   VA L+A  P+ +   +Y+  + PQ+  +L Y
Sbjct:   91 PRAPLCLLSLRDYTTVQAAVELILVWGAYPCVEAGILT-PIPQRVVAKTFKIDRAMVQH---------------VATLESNPS------------------TPAHLDNVLRGLLHVLELSQFKPMLLPAYLADLLAC---LVY-RIHCQPSP----------------------------PPTAAAA-----------RLQQLMDVLPIRVFMGSLRGVLATPHANTTF-KAQCGHLLSQCVLKDGGVLATIEMLLS---------SVDDGNT---------QARLHVAALVARCPRALTTTQYLLAIGPQVMWLLTY 312          
BLAST of mRNA_F-serratus_M_contig902.20439.1 vs. uniprot
Match: W4FL01_9STRA (RTP1_C1 domain-containing protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FL01_9STRA)

HSP 1 Score: 73.6 bits (179), Expect = 4.720e-10
Identity = 89/318 (27.99%), Postives = 133/318 (41.82%), Query Frame = 1
Query:  469 PRPPKGLLSLRDYTVVHAALEIVVHWGLAPVLEPGLGSFDFDKRPRSRAVKISRRVLQYWKKPRQRPEFAGSSRLAAKDSEPAPSLSAEGSVNHPSLGTGRARAQLALCVKAIQGVVTTDQFLPMLLPLYLPDLLAARLQLVYGRGAAVGSPLDERGCRRRDRSTAPAGMRGDVGTTLMFPPSATTGGSRAERQPMGEALQNLLRDLGPRQIMGALRQLLSEGARTPSWLRHHGGRMLSEIVLRPGGVQATLEVYLAGAWAAGGGGSADGGESGKWTEGDGLKACQRVAKLLATPPKRVLPGEYVSRVAPQLAGMLHY 1422
            PR P  LLSLRDYT V AA+E+++ WG  P +E G+ +    +R  ++  KI R ++Q+               +A  +S P+                    A L   ++ +  V+   QF PMLLP YL DLLA    LVY R     SP                            PP+A               LQ L+  L  R  MG+LR +L+      ++ +   G +LS+ VL+ GGV AT+E+ L+         S D G +         +A   VA L+A  P+ +   +Y+  + PQ+  +L Y
Sbjct:   91 PRAPLCLLSLRDYTTVQAAVELILVWGAYPCVEAGILT-PIPQRVVAKTFKIDRAMVQH---------------VATLESNPS------------------TPAHLDNVLRGLLHVLELSQFKPMLLPAYLADLLAC---LVY-RIHCQPSP----------------------------PPTAAAA-----------RLQQLMDVLPIRVFMGSLRGVLATPHANTTF-KAQCGHLLSQCVLKDGGVLATIEMLLS---------SVDDGNT---------QARLHVAALVARCPRALTTTQYLLAIGPQVMWLLTY 312          
BLAST of mRNA_F-serratus_M_contig902.20439.1 vs. uniprot
Match: UPI001591F7F9 (transport and Golgi organization protein 6 homolog isoform X1 n=10 Tax=Lacertinae TaxID=162266 RepID=UPI001591F7F9)

HSP 1 Score: 72.4 bits (176), Expect = 1.150e-9
Identity = 100/339 (29.50%), Postives = 138/339 (40.71%), Query Frame = 1
Query:  457 AAPPPRPPKGLLSLRDYTVVHAALEIVVHWGLAPVLEPGLGSFDFDKRPRSRAVKISRRVLQYWKKPRQRPEFAGSSRLAAKDSEPAPSLSAEGSVNHPSLGTGRARAQLALCVKAIQGVVTTDQFLPMLLPLYLPDLLAARLQLVY----GRGAAVGSPLDER--GCRRRDRSTAPAGMRGDVGTTLMFPPSATTGG-SRAERQPMGEALQNLL---------RDL-----GPRQIMGALRQLLSEG-ARTPSWLRHHGGRMLSEIVLRPGGVQATLEVYLAGAWAAGGGGSADGGESGKWTEGDGLKACQRVAKLLATPPKRVLPGE-YVSRVAPQL 1404
            AAPP  P    LS+     V AAL+ VV  G+ P L PG+G                   L      R R EF+   +  A                 P   +   R   A C   ++ V        ++L  +L DLLA   QL +     +G     PL+E+   C+   R          VG  L   P     G +  ER    EALQ LL         R+L     GP+Q  G+  +    G A  P+WLR   G++LSE ++RPGGVQA +   L GA A   GGS+    +  W      + C  VA++L+T P++ L  E Y  +V PQ+
Sbjct:  122 AAPPLSP--DTLSIAQEKTVQAALQFVVTLGICPYLLPGVG-------------------LPL----RSRTEFSALVQEVAS----------------PRCISSATRRLYATCTVLME-VADHTSLSRLILTRHLGDLLAGLCQLGFCPARRKGEEEAKPLEEQVVSCQLGFRVGNLLWPSAAVGLQLPSAPGVMGNGLTEEERSSCREALQGLLDRVYQPLVVRELLLLQGGPKQGSGSSGRSSERGLAPAPAWLRRLCGQLLSERLIRPGGVQAVVRGILEGAGAGAAGGSSAEAAAADW------RKCDAVARILSTCPQQSLSLEDYCQQVCPQV 412          
BLAST of mRNA_F-serratus_M_contig902.20439.1 vs. uniprot
Match: A0A024U9C1_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U9C1_9STRA)

HSP 1 Score: 72.0 bits (175), Expect = 1.440e-9
Identity = 88/319 (27.59%), Postives = 137/319 (42.95%), Query Frame = 1
Query:  469 PRPPKGLLSLRDYTVVHAALEIVVHWGLAPVLEPGLGSFDFDKRPRSRAVKISRRVLQYWKKPRQRPEFAGSSRLAAKDSEPAPSLSAEGSVNHPSLGTGRARAQLALCVKAIQGVVTTDQFLPMLLPLYLPDLLAARLQLVYGRGAAVGSPLDERGCRRRDRSTAPAGMRGDVGTTLMFPPSATTGGSRAERQPMGEALQNLLRDLGPRQIMGALRQLLSEGARTP---SWLRHHGGRMLSEIVLRPGGVQATLEVYLAGAWAAGGGGSADGGESGKWTEGDGLKACQRVAKLLATPPKRVLPGEYVSRVAPQLAGML 1416
            PR P  LLSLRDYT V AA+E+++ WG  P +E G+ +    +R  ++  KI + ++Q+               +A   S P         +N PS        QL   +K++  ++   QF PMLLP YL DLL   +  ++              C                       P +  G + A        LQ+LL  +  R IM +LR +L+    TP   +  +   GR+LS+ VL+ GGV AT+E+ L+         + D G +         +A  +VA L+A  P+ +   EY   +APQ+  +L
Sbjct:   94 PRAPLCLLSLRDYTGVQAAMELILVWGAYPCVEHGVLT-PIPQRVVAKTFKIDQAMVQH---------------VATAASSP---------INPPS--------QLDNVLKSLLRILLLSQFKPMLLPAYLSDLLVCLIVRIH--------------CM----------------------PDSPPGAAAA-------LLQHLLDAVPIRVIMASLRGVLA----TPHDNAVFKAQCGRLLSQCVLKDGGVLATIEMLLS---------TVDEGNT---------QARLQVAALIARCPRALTTTEYFHAIAPQVRWLL 314          
BLAST of mRNA_F-serratus_M_contig902.20439.1 vs. uniprot
Match: A0A6G0XAH2_9STRA (RTP1_C1 domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XAH2_9STRA)

HSP 1 Score: 71.2 bits (173), Expect = 2.490e-9
Identity = 86/325 (26.46%), Postives = 133/325 (40.92%), Query Frame = 1
Query:  469 PRPPKGLLSLRDYTVVHAALEIVVHWGLAPVLEPGLGSFDFDKRPRSRAVKISRRVLQYWKKPRQRPEFAGSSRLAAKDSEPAPSLSAEGSVNHPSLGTGRARAQLALCVKAIQGVVTTDQFLPMLLPLYLPDLLAARLQLVYGRGAAVGSPLDERGCRRRDRSTAPAGMRGDVGTTLMFPPSATTGGSRAERQPMGEALQNLLRDLGPRQIMGALRQLLSEGARTPSWLRHHGGRMLSEIVLRPGGVQATLEVYLAGAWAAGGGGSADGGESGKWTEGDGLKACQRVAKLLATPPKRVLPGEYVSRVAPQLAGMLHYDGQQKAL 1443
            PR P  LLSLRDYT V AA+E++  WG  P +E G+ +   D+R  +R  K+ +  +Q               R+AA ++          SV++P+        QL   +  +  ++   QF PMLLP YL DLLA  +  ++              C   +  T    +                             L  L   L  R IM +LR +L +   T    +   G +LS+ VL+ GGV AT+E+ L+         + D G +         +A   VA L++  PK +   +Y+  VAPQ+  +L +    K L
Sbjct:   94 PRAPLCLLSLRDYTTVQAAIELITVWGAYPCVEAGILT-PIDQRVMTRTFKMDKTFVQ---------------RVAALNA----------SVDNPA-------EQLDNVISHLLSLLQLSQFKPMLLPSYLSDLLACLVFRIH--------------CMPENPPTTSRSL-----------------------------LNTLFETLPIRVIMSSLRGVLGQ-RHTNIPFKAQCGLLLSQCVLKDGGVLATIEMLLS---------TVDEGNT---------QARLHVAALISRCPKALSASDYLRAVAPQVHHLLTHSTTTKLL 323          
BLAST of mRNA_F-serratus_M_contig902.20439.1 vs. uniprot
Match: A0A8C2V0B2_CHILA (Transport and golgi organization 6 homolog n=3 Tax=Chinchilla lanigera TaxID=34839 RepID=A0A8C2V0B2_CHILA)

HSP 1 Score: 70.5 bits (171), Expect = 4.590e-9
Identity = 52/141 (36.88%), Postives = 72/141 (51.06%), Query Frame = 1
Query: 1048 QPMGEALQNLLRDLGPRQIMGALRQLLSEGARTPSWLRHHGGRMLSEIVLRPGGVQATLEVYLAGAWAAGGGGSADGGESGKWTEGDGLKACQRVAKLLATPPKRVL-PGEYVSRVAPQLAGMLHYDGQQKALITRQVPRV 1467
            QP+      +L+   P+   GA  QL     RTP+WLR   G++LSE ++RPGGVQA +   L GA A   GGS     +  W      K C  +AK+LA+ P++ L P  Y   + PQ+  + H+   Q  L  RQ  RV
Sbjct:  269 QPLAVRELLILQGGPPQSCTGAKTQLR---CRTPAWLRRLCGQLLSERLMRPGGVQAVVRGILEGAGAGAAGGSDAEATAADW------KKCDLIAKILASCPQQSLSPESYYRDICPQILDLFHF---QDKLTARQFQRV 397          
BLAST of mRNA_F-serratus_M_contig902.20439.1 vs. uniprot
Match: G5C699_HETGA (Transmembrane and coiled-coil domain-containing protein 7 n=1 Tax=Heterocephalus glaber TaxID=10181 RepID=G5C699_HETGA)

HSP 1 Score: 69.3 bits (168), Expect = 9.120e-9
Identity = 44/110 (40.00%), Postives = 61/110 (55.45%), Query Frame = 1
Query: 1141 RTPSWLRHHGGRMLSEIVLRPGGVQATLEVYLAGAWAAGGGGSADGGESGKWTEGDGLKACQRVAKLLATPPKRVL-PGEYVSRVAPQLAGMLHYDGQQKALITRQVPRV 1467
            RTP+WLRH  G++LSE ++RP GVQA +   L GA A   GGS     +  W      K C  +AK+LA+ P++ L P +Y   + PQ+  + H+   Q  L  RQ  RV
Sbjct:  188 RTPAWLRHLCGQLLSERLMRPSGVQAVVRGILEGAGAGAAGGSDAEATAADW------KKCDLIAKILASCPQQSLSPEDYYRDICPQILDLFHF---QDKLTVRQFQRV 288          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig902.20439.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FHX3_ECTSI2.380e-11046.86RTP1_C1 domain-containing protein n=1 Tax=Ectocarp... [more]
A0A6H5JPL2_9PHAE1.200e-10344.01RTP1_C1 domain-containing protein n=1 Tax=Ectocarp... [more]
A0A835YW23_9STRA5.320e-1833.90RTP1_C1 domain-containing protein n=1 Tax=Tribonem... [more]
W4FLD8_9STRA4.240e-1027.99RTP1_C1 domain-containing protein n=1 Tax=Aphanomy... [more]
W4FL01_9STRA4.720e-1027.99RTP1_C1 domain-containing protein n=3 Tax=Aphanomy... [more]
UPI001591F7F91.150e-929.50transport and Golgi organization protein 6 homolog... [more]
A0A024U9C1_9STRA1.440e-927.59Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]
A0A6G0XAH2_9STRA2.490e-926.46RTP1_C1 domain-containing protein n=1 Tax=Aphanomy... [more]
A0A8C2V0B2_CHILA4.590e-936.88Transport and golgi organization 6 homolog n=3 Tax... [more]
G5C699_HETGA9.120e-940.00Transmembrane and coiled-coil domain-containing pr... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig902contigF-serratus_M_contig902:178635..182651 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score377.9
Seed ortholog evalue7.4e-102
Seed eggNOG ortholog2880.D7FHX3
Preferred nameTANGO6
KEGG rclassRC00961
KEGG koko:K01763,ko:K08489
KEGG ReactionR03599
KEGG Pathwayko00450,ko01100,ko04130,map00450,map01100,map04130
Hectar predicted targeting categoryother localisation
GOsGO:0002790,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005794,GO:0005829,GO:0006606,GO:0006810,GO:0006886,GO:0006913,GO:0006996,GO:0007030,GO:0008104,GO:0008150,GO:0009306,GO:0009987,GO:0010256,GO:0012505,GO:0015031,GO:0015833,GO:0016043,GO:0017038,GO:0032940,GO:0033036,GO:0033365,GO:0034504,GO:0034613,GO:0042886,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044444,GO:0044464,GO:0045184,GO:0046903,GO:0046907,GO:0051169,GO:0051170,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0070727,GO:0071702,GO:0071705,GO:0071840,GO:0072594
EggNOG free text desc.protein transport
EggNOG OGsKOG4653@1,KOG4653@2759
EC4.4.1.16
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko04131
Exons4
Model size1476
Cds size1476
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig902.20439.1prot_F-serratus_M_contig902.20439.1Fucus serratus malepolypeptideF-serratus_M_contig902 178635..182651 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932635.514019-CDS-F-serratus_M_contig902:178634..1796611622932635.514019-CDS-F-serratus_M_contig902:178634..179661Fucus serratus maleCDSF-serratus_M_contig902 178635..179661 -
1690964397.14354-CDS-F-serratus_M_contig902:178634..1796611690964397.14354-CDS-F-serratus_M_contig902:178634..179661Fucus serratus maleCDSF-serratus_M_contig902 178635..179661 -
1622932635.5339448-CDS-F-serratus_M_contig902:180158..1803471622932635.5339448-CDS-F-serratus_M_contig902:180158..180347Fucus serratus maleCDSF-serratus_M_contig902 180159..180347 -
1690964397.155477-CDS-F-serratus_M_contig902:180158..1803471690964397.155477-CDS-F-serratus_M_contig902:180158..180347Fucus serratus maleCDSF-serratus_M_contig902 180159..180347 -
1622932635.5606651-CDS-F-serratus_M_contig902:181322..1815011622932635.5606651-CDS-F-serratus_M_contig902:181322..181501Fucus serratus maleCDSF-serratus_M_contig902 181323..181501 -
1690964397.1699169-CDS-F-serratus_M_contig902:181322..1815011690964397.1699169-CDS-F-serratus_M_contig902:181322..181501Fucus serratus maleCDSF-serratus_M_contig902 181323..181501 -
1622932635.584098-CDS-F-serratus_M_contig902:182570..1826511622932635.584098-CDS-F-serratus_M_contig902:182570..182651Fucus serratus maleCDSF-serratus_M_contig902 182571..182651 -
1690964397.1810038-CDS-F-serratus_M_contig902:182570..1826511690964397.1810038-CDS-F-serratus_M_contig902:182570..182651Fucus serratus maleCDSF-serratus_M_contig902 182571..182651 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig902.20439.1

>prot_F-serratus_M_contig902.20439.1 ID=prot_F-serratus_M_contig902.20439.1|Name=mRNA_F-serratus_M_contig902.20439.1|organism=Fucus serratus male|type=polypeptide|length=492bp
MEAHLRKITRCLGKAVAELEQVSTSEKFAHPIAPHSIGQVDAEWIARFHA
GITVPVPPDNDSFAKEENDSHLASRNGEDGVGRTDLSRWEFLESKWLPLL
RDLHRTVSALDREEGEIQKAENARSSKEKEACSGSEDAAGEAAHHGVPGR
RGAAPPPRPPKGLLSLRDYTVVHAALEIVVHWGLAPVLEPGLGSFDFDKR
PRSRAVKISRRVLQYWKKPRQRPEFAGSSRLAAKDSEPAPSLSAEGSVNH
PSLGTGRARAQLALCVKAIQGVVTTDQFLPMLLPLYLPDLLAARLQLVYG
RGAAVGSPLDERGCRRRDRSTAPAGMRGDVGTTLMFPPSATTGGSRAERQ
PMGEALQNLLRDLGPRQIMGALRQLLSEGARTPSWLRHHGGRMLSEIVLR
PGGVQATLEVYLAGAWAAGGGGSADGGESGKWTEGDGLKACQRVAKLLAT
PPKRVLPGEYVSRVAPQLAGMLHYDGQQKALITRQVPRVDP*
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mRNA from alignment at F-serratus_M_contig902:178635..182651-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig902.20439.1 ID=mRNA_F-serratus_M_contig902.20439.1|Name=mRNA_F-serratus_M_contig902.20439.1|organism=Fucus serratus male|type=mRNA|length=4017bp|location=Sequence derived from alignment at F-serratus_M_contig902:178635..182651- (Fucus serratus male)
ATGGAAGCTCACCTTCGCAAGATAACTCGATGCCTAGGGAAAGCTGTGGC GGAGCTAGAGCAGGTGTCCACGTCGGAGAAGGTGGCGGGCCAGGCAAGTT TGAGTTTTCGATTGTCACAATCCCATCGCGACTGCTTCGCGCTGTTCGGC CGCTCGTTCCATTCATTGAATCATTGTGAATTTCAACGCTTTACCAGTAT CTGCAGAACACACCGGAGGCCATGAAGTGAAGGCTGCACAACAACAGATT TAGACAAGCAGACCCGCGTTGCAGTACGTCCAATGGCTGCGACAAAGTAT GTATGATCATTACTTCATCACAGCAGAGAATAGGGATCAACCGGGTAATT TTGCCAATCCTGGTCATGGTCAGCGGAACAGGGCAAATAATTTATTCCCT GTCGCCGTTCGCGCCCGAGAACTTGGTCTCGCGAGACCGGTTCGGCCGTC CCGTCCCGCGTCAGCCTGTCTACTCTCCACACTTGGGCTGAATCACTACA TGTATGGAAAAATACGAGCTCCCTCATCGCTTACCGATAGCTCAAGACTT CGCTTGTTATAGGGACTTCGAGACCTTCTAAGAAAATCTTATTATTATTA TTAGTCTGTACGACAACAGTCCCGAGAAGTCGCCATCAATCTGCTGTCTT CGATGATGCACTTCGTCCTTTCCGGTGATTGTTGGCCAATCTGAAGGCAT CTGAACTTTCCGAGCATCAACACCTTCCAGGGAGATTTGTGTTGAAACAA TTGGGTGGAAGCATGTCGTGACTGTACGAATAGCCTCGTCGATCTCCGCC AGACGAAGCGCGAGCGTCCATCAGCAAAAAGTTTCAAAATCTAGCCTGCA TCCTGGTAAAAAAGTCACATCTTGCGCGCACACAAAGTGTTTCGGTGTTC GCGGACAGCGGGAGGACGGAGAGGAGACCCTGAGTAAGCATCAGATTCGG CTTGGGGGTGGAGAATGATCGGGCTGACGCGGGACGGGACAGTCGAACCT AGTATCGCGAGACCAAATTCTCAAGCGCTAACGGCGACAGCGAAAATGTA TTTCCCTTGTTCAGCTGTCCACGAGCAGCATTGGCAACCTTACAGGGTTG GTGCCCAAATTGCCAAACGTGCTACAATGTTCAATAGGCTTAACACGCAG TTTGCACATCCGATCGCGCCGCATTCGATCGGTCAGGTGGACGCGGAATG GATCGCCCGATTCCACGCAGGGATTACCGTGCCAGTTCCGCCCGACAACG ATTCCTTTGCCAAGGAGGAAAACGACTCTCATTTGGCCTCAAGAAACGGA GAAGATGGCGTGGGAAGAACCGACCTAAGGTGTCAAGTTCCGAGCCGCTC GGAGGCAACATCGATCCCTTGTGCGACCAAACCGCCCGCGCCCATTTTAG CACCGCGTCTGGCGGGGCATCCGATATGTACCGAGTCCAAACACGTGGAC CTCTCGAGGTGTCGCGTGTGTCATTTTTTCCCCTTCATACACCATTTCTA AGCTCTACCAGCATTGCCTTGGGGCGTGCTGATGACCTTTTACAGCCAAG AGTACTCTAAAGCTATAGCGATTGCACGTCTCTGACGTAAAAACATCTTG ATCGTCTTCGTAGCGCCAGTGACTAAATCAAAACGCCTCCTGGAAAGAAG CTGTTGTACCCGTACCATCGTGTCCAAAGGCAATTCTCTTCGAGCTATCA GTTTTACCTGGAAGGAAACATAAAATGTGGTCGTCCTGGTAGCTCAGAGG TAACTTCGTAGCCTTCTGATACGTTGGGACGTGAGTTCGATCCCGGCAAA CTGGGGTTTTCTCACTCAAAACTCAAAACTAAAAAAAAAATGCCCAACGA GTGGAGAACGATTAAATCGTCAGTACATAAAATTCGACTTCACTGTCGAC GAGAGAAATGAATGGCTGAATCCTTCTCGCGAGAATTGTTAAGGCACGCA CCGCAGAAGGAAGGTGGATAAAACATCCTGTGTGACCCCGGCTGGTACGT CCAACGAACTTGATGTCCAGAATGAATGGGAAGAAAACACACGCACACAC ACACACACACACACTATGTGCTATGTACTACGTATCTAATTCTCAACACA GCGTGGTCCGTACTATTTTTTTTAAAGAAAAACCAGAACGCGCCTATACC TTCTGAGCATCCTCCAGTCAGAAGAAAAAATGTCAAAACGTTTAGGTGGG ATCAAAGGCTGCAAATACAAAACCTCTTCATGGCAAATATTTATTACACC AGGATAAGGGTTCCGCCCCAACTCTTACGACTCGAACGCCCAAACCGTCC CGAGTAGGTGGGAGTTCCTCGAATCGAAATGGCTACCGCTCTTGCGCGAC CTCCACCGCACTGTTTCTGCGCTCGACCGAGAAGAGGGGGAGATCCAAAA GGCCGAAAATGCAAGAAGTTCGAAAGAAAAGGAAGCATGCAGCGGGAGCG AAGACGCAGCGGGCGAGGCGGCTCATCACGGGGTGCCGGGGAGGTACCGT GCTGTAGTATTTCGAGTGTATTGAAAGCAATACGTTGCGGCTGGGCTGTC GGTATTTCAGCCGCGGACGGCGTTTCGTCAGCTTTCCCGGTGACCTAAGC TCGCGAGATTCCGCGTGCTTGAATTCCTGTCGTTCGTATGCGCTTACGAA GGAACAAGTGTGTTGCTTTGACGTGCCGCAAGATTTAAGGGGTGACGCTA TGCCATTTACTTTTGAAGTGGGGTATTGGGGTTGGTAGAGCAACAAGTTT GGTTTTGTTCGGCACGATGCTGGTTCCTCGTAATAGAATGAGCAAGGAAT CGTTCGGAGGGTCACGCTTGACGCCGTTGCCGAAAGACGGGGATATAGCA CCGTCGTCCCCCCGGTCTTATGCTGTACGGTCGGCGACGATCATCATCAA TAATTCGCAGCACCTCGACCTAGTCGAATCAAACTTTCTCCGTCCGGCAC CTCATTTTCCTTTCCGCTTCTCGCATCCGATGTTGCGCAGGCGAGGAGCA GCGCCCCCGCCCCGCCCTCCGAAGGGCCTCCTATCCCTCCGCGACTACAC GGTCGTCCATGCCGCCCTCGAAATCGTGGTCCACTGGGGTCTGGCACCGG TGCTGGAACCCGGGTTGGGCAGCTTCGATTTCGACAAGAGACCGCGATCT CGAGCGGTTAAAATATCCCGCCGGGTGCTGCAGTACTGGAAAAAACCAAG GCAACGCCCCGAGTTTGCGGGGTCGTCTCGCCTGGCTGCAAAGGACTCGG AACCCGCTCCTTCATTATCGGCCGAAGGCAGCGTCAACCACCCTTCTCTC GGCACTGGACGCGCGCGTGCGCAGCTTGCGCTTTGTGTGAAAGCCATTCA GGGAGTGGTGACTACAGATCAGTTCCTGCCCATGCTGCTGCCGCTCTACC TGCCCGACCTCCTTGCCGCAAGACTGCAGCTCGTGTACGGCCGGGGCGCC GCTGTGGGTTCACCCCTCGACGAGCGAGGATGTCGCCGCCGCGATCGATC AACCGCACCGGCCGGAATGCGTGGTGATGTGGGCACAACCTTGATGTTTC CACCATCCGCCACGACGGGCGGGTCTCGCGCTGAGCGGCAGCCGATGGGG GAGGCCCTTCAAAATCTGCTGAGGGATTTAGGCCCCCGGCAAATCATGGG AGCGCTCCGGCAGCTGCTGTCGGAAGGTGCGCGGACTCCCTCGTGGCTTC GGCACCACGGCGGCCGAATGCTATCCGAGATCGTTCTGCGACCTGGGGGT GTACAGGCAACGCTCGAGGTATATCTCGCGGGGGCGTGGGCGGCTGGGGG TGGAGGGAGTGCGGACGGCGGCGAAAGCGGGAAGTGGACTGAAGGGGATG GCTTAAAAGCCTGCCAACGCGTGGCGAAGCTGTTGGCGACGCCTCCGAAG CGAGTGCTTCCCGGGGAGTACGTCTCGCGGGTGGCGCCGCAGTTAGCAGG AATGCTTCACTACGACGGGCAGCAGAAAGCACTCATAACCAGGCAAGTGC CCCGGGTGGACCCTTAA
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Coding sequence (CDS) from alignment at F-serratus_M_contig902:178635..182651-

>mRNA_F-serratus_M_contig902.20439.1 ID=mRNA_F-serratus_M_contig902.20439.1|Name=mRNA_F-serratus_M_contig902.20439.1|organism=Fucus serratus male|type=CDS|length=2952bp|location=Sequence derived from alignment at F-serratus_M_contig902:178635..182651- (Fucus serratus male)
ATGGAAGCTCACCTTCGCAAGATAACTCGATGCCTAGGGAAAGCTGTGGC
GGAGCTAGAGCAGGTGTCCACGTCGGAGAAGATGGAAGCTCACCTTCGCA
AGATAACTCGATGCCTAGGGAAAGCTGTGGCGGAGCTAGAGCAGGTGTCC
ACGTCGGAGAAGTTTGCACATCCGATCGCGCCGCATTCGATCGGTCAGGT
GGACGCGGAATGGATCGCCCGATTCCACGCAGGGATTACCGTGCCAGTTC
CGCCCGACAACGATTCCTTTGCCAAGGAGGAAAACGACTCTCATTTGGCC
TCAAGAAACGGAGAAGATGGCGTGGGAAGAACCGACCTAAGTTTGCACAT
CCGATCGCGCCGCATTCGATCGGTCAGGTGGACGCGGAATGGATCGCCCG
ATTCCACGCAGGGATTACCGTGCCAGTTCCGCCCGACAACGATTCCTTTG
CCAAGGAGGAAAACGACTCTCATTTGGCCTCAAGAAACGGAGAAGATGGC
GTGGGAAGAACCGACCTAAGTAGGTGGGAGTTCCTCGAATCGAAATGGCT
ACCGCTCTTGCGCGACCTCCACCGCACTGTTTCTGCGCTCGACCGAGAAG
AGGGGGAGATCCAAAAGGCCGAAAATGCAAGAAGTTCGAAAGAAAAGGAA
GCATGCAGCGGGAGCGAAGACGCAGCGGGCGAGGCGGCTCATCACGGGGT
GCCGGGGAGTAGGTGGGAGTTCCTCGAATCGAAATGGCTACCGCTCTTGC
GCGACCTCCACCGCACTGTTTCTGCGCTCGACCGAGAAGAGGGGGAGATC
CAAAAGGCCGAAAATGCAAGAAGTTCGAAAGAAAAGGAAGCATGCAGCGG
GAGCGAAGACGCAGCGGGCGAGGCGGCTCATCACGGGGTGCCGGGGAGGC
GAGGAGCAGCGCCCCCGCCCCGCCCTCCGAAGGGCCTCCTATCCCTCCGC
GACTACACGGTCGTCCATGCCGCCCTCGAAATCGTGGTCCACTGGGGTCT
GGCACCGGTGCTGGAACCCGGGTTGGGCAGCTTCGATTTCGACAAGAGAC
CGCGATCTCGAGCGGTTAAAATATCCCGCCGGGTGCTGCAGTACTGGAAA
AAACCAAGGCAACGCCCCGAGTTTGCGGGGTCGTCTCGCCTGGCTGCAAA
GGACTCGGAACCCGCTCCTTCATTATCGGCCGAAGGCAGCGTCAACCACC
CTTCTCTCGGCACTGGACGCGCGCGTGCGCAGCTTGCGCTTTGTGTGAAA
GCCATTCAGGGAGTGGTGACTACAGATCAGTTCCTGCCCATGCTGCTGCC
GCTCTACCTGCCCGACCTCCTTGCCGCAAGACTGCAGCTCGTGTACGGCC
GGGGCGCCGCTGTGGGTTCACCCCTCGACGAGCGAGGATGTCGCCGCCGC
GATCGATCAACCGCACCGGCCGGAATGCGTGGTGATGTGGGCACAACCTT
GATGTTTCCACCATCCGCCACGACGGGCGGGTCTCGCGCTGAGCGGCAGC
CGATGGGGGAGGCCCTTCAAAATCTGCTGAGGGATTTAGGCCCCCGGCAA
ATCATGGGAGCGCTCCGGCAGCTGCTGTCGGAAGGTGCGCGGACTCCCTC
GTGGCTTCGGCACCACGGCGGCCGAATGCTATCCGAGATCGTTCTGCGAC
CTGGGGGTGTACAGGCAACGCTCGAGGTATATCTCGCGGGGGCGTGGGCG
GCTGGGGGTGGAGGGAGTGCGGACGGCGGCGAAAGCGGGAAGTGGACTGA
AGGGGATGGCTTAAAAGCCTGCCAACGCGTGGCGAAGCTGTTGGCGACGC
CTCCGAAGCGAGTGCTTCCCGGGGAGTACGTCTCGCGGGTGGCGCCGCAG
TTAGCAGGAATGCTTCACTACGACGGGCAGCAGAAAGCACTCATAACCAG
GCAAGTGCCCCGGGTGGACCCTTAAGCGAGGAGCAGCGCCCCCGCCCCGC
CCTCCGAAGGGCCTCCTATCCCTCCGCGACTACACGGTCGTCCATGCCGC
CCTCGAAATCGTGGTCCACTGGGGTCTGGCACCGGTGCTGGAACCCGGGT
TGGGCAGCTTCGATTTCGACAAGAGACCGCGATCTCGAGCGGTTAAAATA
TCCCGCCGGGTGCTGCAGTACTGGAAAAAACCAAGGCAACGCCCCGAGTT
TGCGGGGTCGTCTCGCCTGGCTGCAAAGGACTCGGAACCCGCTCCTTCAT
TATCGGCCGAAGGCAGCGTCAACCACCCTTCTCTCGGCACTGGACGCGCG
CGTGCGCAGCTTGCGCTTTGTGTGAAAGCCATTCAGGGAGTGGTGACTAC
AGATCAGTTCCTGCCCATGCTGCTGCCGCTCTACCTGCCCGACCTCCTTG
CCGCAAGACTGCAGCTCGTGTACGGCCGGGGCGCCGCTGTGGGTTCACCC
CTCGACGAGCGAGGATGTCGCCGCCGCGATCGATCAACCGCACCGGCCGG
AATGCGTGGTGATGTGGGCACAACCTTGATGTTTCCACCATCCGCCACGA
CGGGCGGGTCTCGCGCTGAGCGGCAGCCGATGGGGGAGGCCCTTCAAAAT
CTGCTGAGGGATTTAGGCCCCCGGCAAATCATGGGAGCGCTCCGGCAGCT
GCTGTCGGAAGGTGCGCGGACTCCCTCGTGGCTTCGGCACCACGGCGGCC
GAATGCTATCCGAGATCGTTCTGCGACCTGGGGGTGTACAGGCAACGCTC
GAGGTATATCTCGCGGGGGCGTGGGCGGCTGGGGGTGGAGGGAGTGCGGA
CGGCGGCGAAAGCGGGAAGTGGACTGAAGGGGATGGCTTAAAAGCCTGCC
AACGCGTGGCGAAGCTGTTGGCGACGCCTCCGAAGCGAGTGCTTCCCGGG
GAGTACGTCTCGCGGGTGGCGCCGCAGTTAGCAGGAATGCTTCACTACGA
CGGGCAGCAGAAAGCACTCATAACCAGGCAAGTGCCCCGGGTGGACCCTT
AA
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