mRNA_F-serratus_M_contig901.20421.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig901.20421.1
Unique NamemRNA_F-serratus_M_contig901.20421.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig901.20421.1 vs. uniprot
Match: D7FW44_ECTSI (Aromatic amino acid permease n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FW44_ECTSI)

HSP 1 Score: 532 bits (1370), Expect = 1.410e-183
Identity = 299/500 (59.80%), Postives = 352/500 (70.40%), Query Frame = 1
Query:   16 MKSAILLGTVLLEANLLQVHSFTQGPPLHLRRLVNRREQASDVFLLASTIPGTPDSTSISTSFTVYDKAADEGKHSRRGEGGGGIINNSALVAGNMVGAGVLALPHVAEGPGFLLSSAAMVVVWGYCLSSAIIVAECAGNGRETIQKMAEASVGRTAGNLMCASFLASNYLLLVAYISQGASLLPAVPA--LSSFLTSFVGDIHLAPMVFTTLVGFTSLWSPVRFAEKANTALVGMIILSFGGLVALGLPHVDVESLGLTPDASALPSMLPVAVCALTFQNVVPTVSKNLGGDPMKIRSSIAIGSGVPLMSYILWNAVVLGNIGGID---SAGMTSPTDALGATSPLLGVLVAVFSMSAIVTSFWGASFSLMSECTHLVDAMTS--RGSLWDTKEQPPIVDDTRPIDERTQHDGSAKTAAAAMLVLLPPAIVSTTCTDSFATALQYVGTYVNPFLYGVAPAFMAYRLRDVENHKIQFPGGTTALAFVAAVTCGYMLWQTF 1494
            M+S +LL    L A L     FT   PL L R    R Q+  VF   S++PGTPD         V+     + +  +  E  G I++NSALVAGNM+GAGVLALP V   PGF+LSS AMVVVWGYCL S I+VAECAG GR ++Q+MAEASVG+TAGN MCA+FL SNYLL+VAYI QGAS LP           TS + D HLAP++FT LVG  SLW P RF E ANTALVG+I +SFGGLVA GLP VDV  LGLTPDAS LP+MLPVA+CALTFQNVVP VSKNL GD  KI++S+AIGSG+PLM+YILWNAVVLG+ G +D   +  M SP DAL ATSP L  LV+VFS+SAI+TSFWGA+FSLM E THLVDA+ S  R  ++DT  Q P+ DD R IDE  +HD + K  A   LVL+PP +VS  C DSF TAL Y G YV+PFLYG+APA MAY +R  + H+ Q PGGT  LAFVA VT GY+ WQTF
Sbjct:    1 MRSQVLL----LAAALPTAVCFTGSLPLPLTRCAGNRGQSGSVFPRWSSVPGTPD---------VFPPVESDIEIPQE-ESHGSILSNSALVAGNMIGAGVLALPSVTGAPGFVLSSTAMVVVWGYCLCSGILVAECAGQGRSSVQEMAEASVGKTAGNFMCAAFLMSNYLLMVAYICQGASSLPLFRPEFCGPVFTSCMKDFHLAPLLFTGLVGSVSLWGPARFVEAANTALVGLIAISFGGLVATGLPRVDVALLGLTPDASTLPAMLPVALCALTFQNVVPAVSKNLNGDARKIKASLAIGSGLPLMTYILWNAVVLGSTGSLDPNSAVEMVSPLDALAATSPALASLVSVFSISAIITSFWGAAFSLMIELTHLVDALMSERRIGIFDTIGQFPMADDARSIDEVARHDQNVKLCATG-LVLVPPTVVSMACPDSFLTALDYAGIYVDPFLYGLAPACMAYYMRSGDGHRAQLPGGTGGLAFVAVVTSGYIAWQTF 485          
BLAST of mRNA_F-serratus_M_contig901.20421.1 vs. uniprot
Match: A0A836CN59_9STRA (Tryptophan/tyrosine permease family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CN59_9STRA)

HSP 1 Score: 243 bits (621), Expect = 2.310e-70
Identity = 171/460 (37.17%), Postives = 240/460 (52.17%), Query Frame = 1
Query:  241 SRRGEGGGG---------------IINNSALVAGNMVGAGVLALPHVAEGPGFLLSSAAMVVVWGYCLSSAIIVAE-CAGNGRE-----TIQKMAEASVGRTAGNLMCASFLASNYLLLVAYISQGASLLPAVPALSSFLT--SFVGDIH-LAPMVFTTLVGFTSLWSPVRFAEKANTALVGMIILSFGGLVALGLPHVDVESLGLTPDASALPSMLPVAVCALTFQNVVPTVSKNLGGDPMKIRSSIAIGSGVPLMSYILWNAVVLGNIGGIDSAGMTSPTDALGATSPL--LGVLVAVFSMSAIVTSFWGASFSLMSECTHLVDAMTSRGSLWDTKEQPPIVD-DTRPIDERTQHDGSAKTAAAAMLVLLPPAIVSTTCTDSFATALQYVGTYVNPFLYGVAPAFMAYRLRDVENHKIQF-------------------PGGTTALAFVAAVTCGYML 1482
            SRRG GG G               ++N +ALV GNMVGAG+LALP V   PGF+ +++AMV VWG+CL + +++AE CA +G       T++ +A A++G  AG L+ A F+A NYLL+VAYISQG+ ++ A+P         +F  D   L P++F   VG   LW   R  + AN ALV +I+ SF  LVA G PHVD  +L      +ALP +LPV +CA+TFQN+VP V+  LGGD  ++R+++  G+GVPL+ Y+ W+AV+LG      +        ALG    +  LG  VAVFS +A+VTSF+G+  SLM+E   L+      G+ W      P+                               A+ +    D+F TAL+  G   +P LYGV PA MA+R+RD                           PGG   L  V A++  +ML
Sbjct:   96 SRRGGGGSGDAAACPDAAPLFTPEVLNAAALVGGNMVGAGILALPTVTAAPGFVPAASAMVGVWGFCLLTGLLIAETCAAHGAAHGAPATVRGIAAATLGPRAGALVGAGFIAKNYLLMVAYISQGSHVVGALPVFDGLGGGGAFPDDAAALLPVLFAAAVGGFGLWGGARAVDGANAALVAVILASFAALVAAGAPHVDAAALLRGAAPAALPPVLPVILCAMTFQNIVPVVTTALGGDLPRVRAALVAGTGVPLLMYLTWDAVMLGQRAPPLAPLYDGAAAALGGGGGVDALGAAVAVFSFAALVTSFFGSCKSLMAEFEGLLSG-GGGGATWAEALARPLARLGXXXXXXXXXXXXXXXXXXXXXXXXTAAAVAAGDAQDAFLTALRIAGGLGDPLLYGVVPALMAWRVRDAAXXXXXXXXGGYATDETVDGAAETIVPGGKPMLGAVVALSVCFML 554          
BLAST of mRNA_F-serratus_M_contig901.20421.1 vs. uniprot
Match: A0A2Z6CRZ0_9NOSO (Aromatic amino acid permease n=5 Tax=Nostocales TaxID=1161 RepID=A0A2Z6CRZ0_9NOSO)

HSP 1 Score: 186 bits (473), Expect = 4.070e-50
Identity = 144/427 (33.72%), Postives = 213/427 (49.88%), Query Frame = 1
Query:  262 GGIINNSALVAGNMVGAGVLALPHVAEGPGFLLSSAAMVVVWGYCLSSAIIVAECAGN-----GRETIQKMA--EASVGRTAGNLMCASFLASNYLLLVAYISQGASLLPA----VPALSSFLTSFVGDIHLAPMVFTTLVGFTSLWSPVRFAEKANTALVGMIILSFGGLVALGLPHVDVESLGLTPDASALPSMLPVAVCALTFQNVVPTVSKNLGGDPMKIRSSIAIGSGVPLMSYILWNAVVLGNIGGIDSAGMT--SPTDAL--GATSPLLGVLVAVFSMSAIVTSFWGASFSLMSECTHLVDAMTSRGSLWDTKEQPPIVDDTRPIDERTQHDGSAKTAAAAMLVLLPPAIVSTTCTDSFATALQYVGTYVNPFLYGVAPAFMAYRLRDVENHKIQF-PGGTTALAFVAAVTCGYMLWQTF 1494
            G ++ ++ALVAG  VGAG+LALP V    G + S+  ++ VW Y L + +++AE + N     GR ++  +A  E ++G     +  A++L  +Y LLVAYI+QG  +L +    V  + + L S++G        FT L G        +F EK N  LVG+++ SF GL+ LG   V    L L  + SAL + +PV + AL + N+VP V   L GD  K+R SI IGS +PL+ ++ WNAV+LG++      G T   P   L  G    LLGVLV++FS  AI TSF G  + L+                          D  + I   TQ+  +++    + LVLLPP  +       F TAL + GT+    L G+ PA   ++ R    H   F PGG   L  +  +  G +L + F
Sbjct:   34 GSVLGSTALVAGTTVGAGILALPAVTLPSGIIPSTVLLIAVWLYTLVAGLLIAEVSINTMRLAGRPSVSLLAMIETALGLNGARMAGAAYLLLHYALLVAYITQGGEILMSAVSHVWGVQNSLPSWIGT-----TAFTLLFGSIMYLGRGKFIEKLNNFLVGIVLASFLGLLLLGFTQVKGVHL-LFQNWSALSTAIPVMLVALFYHNIVPVVVTQLEGDSRKVRQSIIIGSAIPLLMFLAWNAVILGSVSSEMIHGKTIFDPIQVLRAGGGGELLGVLVSIFSEFAIATSFIGFVYGLL--------------------------DFFQDIFATTQNKPASRLPLYS-LVLLPPIGLGAVNPSIFFTALDFTGTFSISILGGIIPALATWKQRQQLQHSNHFVPGGKLTLILMIGIALGIILKEIF 427          
BLAST of mRNA_F-serratus_M_contig901.20421.1 vs. uniprot
Match: UPI0016835787 (tyrosine transporter n=2 Tax=Nostoc TaxID=1177 RepID=UPI0016835787)

HSP 1 Score: 184 bits (466), Expect = 4.860e-49
Identity = 145/431 (33.64%), Postives = 210/431 (48.72%), Query Frame = 1
Query:  262 GGIINNSALVAGNMVGAGVLALPHVAEGPGFLLSSAAMVVVWGYCLSSAIIVAECAGN-----GRETIQKMA--EASVGRTAGNLMCASFLASNYLLLVAYISQGASLLPA----VPALSSFLTSFVGDIHLAPMVFTTLVGFTSLWSPVRFAEKANTALVGMIILSFGGLVALGLPHVDVESLGLTPDASALPSMLPVAVCALTFQNVVPTVSKNLGGDPMKIRSSIAIGSGVPLMSYILWNAVVLGNIG-GIDSAGMTSPTDAL-----GATSPLLGVLVAVFSMSAIVTSFWGASFSLMSECTHLVDAMTSRGSLWDTKEQPPIVDDTRPIDERTQHDGSAKTAAAAMLVLLPPAIVSTTCTDSFATALQYVGTYVNPFLYGVAPAFMAYRLRDVENHKIQF-PGGTTALAFVAAVTCGYMLWQTFFM 1500
            G ++ ++AL+AG  VGAG+LALP V    G       ++ VW Y L S +++AE + N     GR +I  +A  E ++G+    +   ++L  +Y LLVAYI+QG  +L +    V  + + L S+VG +      FT L G        +  EK N A VG+++ SF GL+ LG+  V      L  D +AL + +PV + AL + NVVP V   L GD  KIR SI IGS +PL+ ++ WNAV+LG++   I  AG  +  D L     G     LGVLV++FS  AI TSF G  + L+                          D  + I   TQ   +A       L+LLPP  +     + F TAL + GT+    L G+ PA   ++ R    H  +  PGG   L  +  V  G +L Q  F+
Sbjct:   34 GSVLGSTALIAGTTVGAGILALPAVTLPSGXXXXXVLLIAVWLYALISGLLIAEVSINTMRLAGRPSIGLLAMVENTLGQAGARIFGGAYLFLHYALLVAYITQGGDILVSAVSHVWGMQNILPSWVGTV-----AFTLLFGGIMYVGREKLIEKLNNAFVGIVLASFLGLLFLGITQVKTVHF-LFQDWNALGTAIPVMLVALFYHNVVPVVVTQLEGDSRKIRQSITIGSAIPLIMFLAWNAVILGSVSPDILKAGSQAVFDPLQVLRAGGGGQWLGVLVSIFSEFAIATSFIGFVYGLL--------------------------DLFKDISPNTQTQ-TANRLPLYSLILLPPMSLGAINPNIFLTALDFAGTFSISILGGIIPALATWKQRQQLQHTNRLVPGGKLTLIIMIGVALGLILKQIIFL 431          
BLAST of mRNA_F-serratus_M_contig901.20421.1 vs. uniprot
Match: A0A139X9S4_9CYAN (Tyrosine transporter n=3 Tax=Nostocales TaxID=1161 RepID=A0A139X9S4_9CYAN)

HSP 1 Score: 183 bits (464), Expect = 8.250e-49
Identity = 136/426 (31.92%), Postives = 210/426 (49.30%), Query Frame = 1
Query:  262 GGIINNSALVAGNMVGAGVLALPHVAEGPGFLLSSAAMVVVWGYCLSSAIIVAECAGNGRETIQK-------MAEASVGRTAGNLMCASFLASNYLLLVAYISQGASLLPAVP----ALSSFLTSFVGDIHLAPMVFTTLVGFTSLWSPVRFAEKANTALVGMIILSFGGLVALGLPHVDVESLGLTPDASALPSMLPVAVCALTFQNVVPTVSKNLGGDPMKIRSSIAIGSGVPLMSYILWNAVVLGNIGGIDSAGMTS------PTDAL--GATSPLLGVLVAVFSMSAIVTSFWGASFSLMSECTHLVDAMTSRGSLWDTKEQPPIVDDTRPIDERTQHDGSAKTAAAAMLVLLPPAIVSTTCTDSFATALQYVGTYVNPFLYGVAPAFMAYRLRDVENHKIQ------FPGGTTALAFVAAV 1464
            G ++ ++AL+AG  +GAG+LALP V    G + S+  ++ VW Y L S +++AE A N    + +       M E ++G  A  +   ++L  +Y LLVAY+SQG  +L +       L   L +++G        FT L G        +F EK N+A V +++ SF GL+ LG+ H+++ S     D  ALP  + V   AL + NV+PT+   L GD  KIR SI +GS +PL+ ++ WNAV+LG+I  +D+  +T+      P   L  G+    LG+LV++FS  A+VTSF G  + L+                          D  + I   T   GS+K      L+L+PP  +S    + F  AL Y GT+    L G+ PA M+++ R  +   +        PGG   L  +  V
Sbjct:   31 GSVLGSTALIAGTTIGAGILALPAVTLPSGVVPSTVLLIGVWLYALVSGLLIAEVALNAMRRVGRPSLGLLVMVERTLGSLAARIAGGAYLFLHYALLVAYVSQGGDILVSATEKLLGLHHVLPTWIGT-----TTFTLLFGGILYLGREKFIEKLNSAFVAIVLTSFVGLLFLGVTHINISSF-FFQDWKALPPAVSVMFVALFYHNVIPTIVTQLEGDARKIRQSIVVGSAIPLIMFLAWNAVILGSIN-VDAIQVTASGKTFDPLHILQSGSAGYSLGILVSIFSEFALVTSFIGFVYGLL--------------------------DFFKDIFPSTPQ-GSSKRLPLYSLILVPPMSLSALNPNIFLAALDYAGTFSISVLGGILPALMSWKQRQEQEEDLHSNVQPLVPGGKITLIVMIGV 422          
BLAST of mRNA_F-serratus_M_contig901.20421.1 vs. uniprot
Match: UPI001E2C35C8 (tyrosine transporter n=1 Tax=Nostoc sp. CHAB 5844 TaxID=2780405 RepID=UPI001E2C35C8)

HSP 1 Score: 182 bits (463), Expect = 1.120e-48
Identity = 141/422 (33.41%), Postives = 207/422 (49.05%), Query Frame = 1
Query:  262 GGIINNSALVAGNMVGAGVLALPHVAEGPGFLLSSAAMVVVWGYCLSSAIIVAECAGN-----GRETIQKMA--EASVGRTAGNLMCASFLASNYLLLVAYISQGASLLPAVPALSSFLTSFVGDIHLAPMVFTTLVGFTSLWSPVRFAEKANTALVGMIILSFGGLVALGLPHVDVESLGLTPDASALPSMLPVAVCALTFQNVVPTVSKNLGGDPMKIRSSIAIGSGVPLMSYILWNAVVLGNIGGIDSAGMTSPTDAL-----GATSPLLGVLVAVFSMSAIVTSFWGASFSLMSECTHLVDAMTSRGSLWDTKEQPPIVDDTRPIDERTQHDGSAKTAAAAMLVLLPPAIVSTTCTDSFATALQYVGTYVNPFLYGVAPAFMAYRLRDVENHKIQF-PGGTTALAFVAAVTCGYMLWQ 1488
            G ++ ++ALVAG  VGAG+LALP V    G    +  ++ VW Y L S +++AE + N     GR ++  +A  E ++G     +  A++L  +Y LLVAY++QG  +L +   L     S  G +     VFT L G     +  +F EK N  LVG+++ SF GL+ LG+  V      L  + SAL + +PV + AL + N+VP V   L GD  K++ SI IGS +PLM ++ WNAV+LG++      G  +  D L     G     LGVLV++FS  AI TSF G  + L+                          D  + I   TQ + +++    + LVLLPP  +       F TAL + GTY    L G+ PA   ++ R    H  Q  PGG   L  +  +  G +L Q
Sbjct:   34 GSLLGSTALVAGTTVGAGILALPAVTLPSGVXXXTVLLIAVWLYALVSGLLIAEVSINTMRLAGRPSVGLLAMIENTLGLVGARIAGAAYLFLHYTLLVAYVTQGGEILLSASHLWGMQNSLPGWV--GTTVFTLLFGSIMYLAREKFIEKLNNLLVGIVLASFLGLLLLGVTQVKGVHF-LFQNWSALGTAIPVMLVALFYHNIVPVVVTQLEGDSRKVKQSIIIGSAIPLMMFLAWNAVILGSVSPDMINGEGTVFDPLQVLRTGGGGEWLGVLVSIFSEFAIATSFIGFVYGLL--------------------------DFFKDISANTQTEPASRLPLYS-LVLLPPIGLGAINPSIFFTALDFAGTYSISILGGIIPALATWKQRQQLQHSNQLVPGGKLTLIVMIGIASGIILKQ 425          
BLAST of mRNA_F-serratus_M_contig901.20421.1 vs. uniprot
Match: A0A5B8MJA0_9CHLO (Tyrosine-specific transport protein n=1 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MJA0_9CHLO)

HSP 1 Score: 182 bits (463), Expect = 2.550e-48
Identity = 135/425 (31.76%), Postives = 209/425 (49.18%), Query Frame = 1
Query:  262 GGIINNSALVAGNMVGAGVLALPHVAEGPGFLLSSAAMVVVWGYCLSSAIIVAEC-------AGNGRETIQKMAEASVGRTAGNLMCASFLASNYLLLVAYISQGASLLPAVPALSSFLTSFVGDIHLAPMVFTTLVGFTSLWSPVRFAEKANTALVGMIILSFGGLVALGLPHVDVESLGLTPDASALPSMLPVAVCALTFQNVVPTVSKNLGGDPMKIRSSIAIGSGVPLMSYILWNAVVLG-NIGGIDSA--GMTSPTDALGATSPLLGVLVAVFSMSAIVTSFWGASFSLMSECTHLVDAMTSRGSLWDTKEQPPIVDDTRPIDERTQHDGSAKTAAAAMLVLLPPAIVSTTCTDSFATALQYVGTYVNPFLYGVAPAFMAYRLRDVENHKIQ-----FPGGTTALAFVAAVTCGYMLWQT 1491
            G ++ + +LVAG  VGAG+LALP V  G G+L SSA ++  W Y   + +++AE         G G  ++  MAE + G     L   +++  +Y LLVAYIS+G  L+  +   S  L S         + F +L+G T   S     ++ NTALVG ++LSF G++A+     D   LG   D   + S +PV   +  F N+VPTV+ +L GD  KI ++I  G+ +PL+ ++LWNA +LG N+ G D+A   +  P   L      +G  +  FS+ A+ TSF G    L+     + D +             P+               + K+     L L+PPA+ +    D+F +AL+Y GTY    L+GV PA MA+++R+ ++  +       PGG   L  V     G +  QT
Sbjct:   74 GSVLGSVSLVAGTTVGAGILALPAVTAGTGYLPSSAVILGCWAYSCVTGLLLAEVNLFLMCELGRGGVSMLSMAEDTFGGPGRILAGTTYVFLHYSLLVAYISRGGELISGIADFSPALAS---------VAFGSLLGVTIYASNPSVLDRVNTALVGGVVLSFFGILAVAFGKFDASQLGHA-DVGRVMSCVPVVALSFVFHNIVPTVTSSLEGDRRKITTAIVAGTTIPLVMFLLWNAAILGYNLDGSDAADGSILDPLKVL-EEDATVGTYIMSFSLLAVATSFIGFVLGLVD---FIADGLNM-----------PV---------------NTKSLVPFSLTLVPPALFAVVYPDAFLSALEYAGTYGVLALFGVLPAAMAWKIRERKDLGVADVPSLVPGGVPMLVVVGGAALGVITQQT 458          
BLAST of mRNA_F-serratus_M_contig901.20421.1 vs. uniprot
Match: A0A0M5MI44_9NOSO (Tyrosine transporter n=8 Tax=Nostocales TaxID=1161 RepID=A0A0M5MI44_9NOSO)

HSP 1 Score: 181 bits (459), Expect = 2.820e-48
Identity = 146/429 (34.03%), Postives = 215/429 (50.12%), Query Frame = 1
Query:  262 GGIINNSALVAGNMVGAGVLALPHVAEGPGFLLSSAAMVVVWGYCLSSAIIVAECAGN-----GRETIQKMA--EASVGRTAGNLMCASFLASNYLLLVAYISQGASLL-PAVPAL---SSFLTSFVGDIHLAPMVFTTLVGFTSLWSPVRFAEKANTALVGMIILSFGGLVALGLPHVDVESLGLTPDASALPSMLPVAVCALTFQNVVPTVSKNLGGDPMKIRSSIAIGSGVPLMSYILWNAVVLGNIGG--IDSAGMTSPTDAL--GATSPLLGVLVAVFSMSAIVTSFWGASFSLMSECTHLVDAMTSRGSLWDTKEQPPIVDDTRPIDERTQHDGSAKTAAAAMLVLLPPAIVSTTCTDSFATALQYVGTYVNPFLYGVAPAFMAYRLRDVENHKIQF-PGGTTALAFVAAVTCGYMLWQTFFM 1500
            G ++ ++ALVAG  VGAG+LALP V    G + S+  ++ VW Y L S +++AE + N     GR ++  +A  E ++G     +   +++  +Y LLVAY++QG  +L  AV  L    + L ++VG        FT L G        +F EK N  LVG++I+SF GL+ LG+  V      L  + SAL + +PV + AL + N+VP V   L GD  K+R SI IGS +PL+ ++ WNAV+LG++    I S  M  P   L  G    LLGVLV++FS  AI TSF G  + L+                          D  + I  +TQ   +++    + LVLLPP  +       F TAL + GT+    L G+ PA   ++ R    H  QF PGG   L  +  +    +L + F M
Sbjct:   13 GSVLGSTALVAGTTVGAGILALPAVTLPSGVIPSTVLLIAVWLYTLVSGLLIAEVSINTMRLAGRPSVGLLAMIENTLGTKGARMAGVAYMLLHYALLVAYVTQGGEILISAVSHLWGGQNLLPNWVGTAG-----FTLLFGSIMYLGRGKFIEKLNNFLVGIVIVSFLGLLLLGVTQVQGVHF-LFQNWSALGTAVPVMLVALFYHNIVPVVVTQLEGDSRKVRQSIIIGSAIPLVMFLAWNAVILGSVSPEMIHSTTMFDPIQVLRAGGGGELLGVLVSIFSEFAIATSFIGFVYGLL--------------------------DFFQDIFAKTQTKPTSRLPLYS-LVLLPPIGLGAINPGIFFTALDFAGTFSISILGGIIPALATWKQRQQLQHTNQFVPGGKLTLILMIGIAVVMILKEIFAM 408          
BLAST of mRNA_F-serratus_M_contig901.20421.1 vs. uniprot
Match: A0A8J7BZI2_9CYAN (Tyrosine transporter n=1 Tax=Iningainema tapete BLCC-T55 TaxID=2748662 RepID=A0A8J7BZI2_9CYAN)

HSP 1 Score: 181 bits (459), Expect = 4.140e-48
Identity = 141/433 (32.56%), Postives = 210/433 (48.50%), Query Frame = 1
Query:  262 GGIINNSALVAGNMVGAGVLALPHVAEGPGFLLSSAAMVVVWGYCLSSAIIVAECA-------GNGRETIQKMAEASVGRTAGNLMCASFLASNYLLLVAYISQGASLLPA----VPALSSFLTSFVGDIHLAPMVFTTLVGFTSLWSPVRFAEKANTALVGMIILSFGGLVALGLPHVDVESLGLTPDASALPSMLPVAVCALTFQNVVPTVSKNLGGDPMKIRSSIAIGSGVPLMSYILWNAVVLGNIG-----GIDSAGMTSPTDAL--GATSPLLGVLVAVFSMSAIVTSFWGASFSLMSECTHLVDAMTSRGSLWDTKEQPPIVDDTRPIDERTQHDGSAKTAAAAMLVLLPPAIVSTTCTDSFATALQYVGTYVNPFLYGVAPAFMAYRLRDVENHKIQ---FPGGTTALAF---VAAVTCGYMLWQ 1488
            G ++ ++AL+AG  VGAG+LALP V    G + S+A ++ VW Y L SA+++ E         G+    +  M E+++ +    +   ++L  +Y LLVAYI+QG  +L +    V  + + L  +VG        FT L G        +  EK N+A V ++I+SF GL+ L   H+      +  + SALP  + V   AL F N++P V+  L GD  KIRSSI IGS +PL+ ++ WNAV+LG++      GI  A +  P  AL  G    LLGVLV+VFS  AI TSF G  + L+                           D  P   +      ++      L+L PP  +ST     F TAL Y GT+ +  L G+ PA + ++ R + + +I+    PGG   L     VA    G  +W 
Sbjct:   27 GSVLGSTALIAGTTVGAGILALPAVTLPSGVVPSTALLIAVWLYALVSALLLVEVTLNTMRFGGSSSNGLLVMVESTLSKPIARITGGAYLFYHYTLLVAYIAQGGEILGSAVEKVAGVQNDLPVWVGT-----TTFTLLFGGIMYLGREKLVEKLNSAFVAIVIVSFIGLLLLAGTHIHPSQFSVQ-NWSALPPAVSVMFVALFFHNIIPVVTVQLEGDVRKIRSSIIIGSVIPLIMFLAWNAVILGSVSPDTIQGIGGA-VFDPLQALRNGGAGELLGVLVSVFSEFAIATSFIGFVYGLLD-----------------------FFKDISPAPNQL-----SRRLPLFSLILFPPLSLSTLNPGIFLTALDYAGTFSSSILAGIIPALICWKQRQLYSGRIEQTLVPGGKLTLVVMIGVALAVIGRQIWS 424          
BLAST of mRNA_F-serratus_M_contig901.20421.1 vs. uniprot
Match: K9WZ78_9NOST (Amino acid permease n=2 Tax=Cylindrospermum TaxID=56106 RepID=K9WZ78_9NOST)

HSP 1 Score: 181 bits (459), Expect = 4.830e-48
Identity = 148/433 (34.18%), Postives = 211/433 (48.73%), Query Frame = 1
Query:  262 GGIINNSALVAGNMVGAGVLALPHVAEGPGFLLSSAAMVVVWGYCLSSAIIVAECAGN-----GRETIQKMA--EASVGRTAGNLMCASFLASNYLLLVAYISQGASLLPAVPA----LSSFLTSFVGDIHLAPMVFTTLVGFTSLWSPVRFAEKANTALVGMIILSFGGLVALGLPHVDVESLGLTPDASALPSMLPVAVCALTFQNVVPTVSKNLGGDPMKIRSSIAIGSGVPLMSYILWNAVVLGNIGG----IDSAGMT--SPTDAL--GATSPLLGVLVAVFSMSAIVTSFWGASFSLMSECTHLVDAMTSRGSLWDTKEQPPIVDDTRPIDERTQHDGSAKTAAAAMLVLLPPAIVSTTCTDSFATALQYVGTYVNPFLYGVAPAFMAYRLRDVEN-----HKIQFPGGTTALAFVAAVTCGYMLWQ 1488
            G ++ ++AL+AG  VGAG+LALP V    G L S+A ++ VW Y L S +++AE   N     GR ++  +   E ++G+    +   ++L  +Y LLVAYI+QG  +L +  A    + + L ++VG        FT L G        RF +K N+A V ++I+SF GL+ LG   V    + L  D +AL S + V   AL +QNVVP V   L GD  KIR SI IGS +PL+ ++ WNAV+LG++      + S G T   P   L  G    LLGVLV++FS  AI TSF G  + L+                          D  + I   TQ  G         L+L PP  + T     F TAL Y GT     L G+ PA M+++ R  +      ++   PGG   L  V A+  G +  Q
Sbjct:   31 GSVLGSTALIAGTTVGAGILALPAVTLPSGVLPSTALLIAVWLYALVSGLLIAEVTLNAMRLEGRPSVGLLVVVEKTLGKLGARIAGGAYLFMHYALLVAYITQGGDILISAIAKILGMENVLPTWVGT-----TTFTLLFGGIMYLGRERFIQKLNSAFVAIVIVSFLGLLLLGGGQVKSAQI-LFQDWTALGSAVSVMCVALFYQNVVPVVVTQLEGDVHKIRQSIVIGSLIPLIMFLAWNAVILGSVSPDMLKLASVGATVFDPLQVLRTGGAGELLGVLVSIFSEFAIATSFIGFVYGLL--------------------------DFFKDISLLTQ--GGLSRLPLYSLILFPPMSLGTLNPSIFFTALDYTGTLSISILGGIIPALMSWKQRQAQELTNGINQPLVPGGKVTLIVVIAIALGLITRQ 429          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig901.20421.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FW44_ECTSI1.410e-18359.80Aromatic amino acid permease n=2 Tax=Ectocarpus Ta... [more]
A0A836CN59_9STRA2.310e-7037.17Tryptophan/tyrosine permease family-domain-contain... [more]
A0A2Z6CRZ0_9NOSO4.070e-5033.72Aromatic amino acid permease n=5 Tax=Nostocales Ta... [more]
UPI00168357874.860e-4933.64tyrosine transporter n=2 Tax=Nostoc TaxID=1177 Rep... [more]
A0A139X9S4_9CYAN8.250e-4931.92Tyrosine transporter n=3 Tax=Nostocales TaxID=1161... [more]
UPI001E2C35C81.120e-4833.41tyrosine transporter n=1 Tax=Nostoc sp. CHAB 5844 ... [more]
A0A5B8MJA0_9CHLO2.550e-4831.76Tyrosine-specific transport protein n=1 Tax=Chloro... [more]
A0A0M5MI44_9NOSO2.820e-4834.03Tyrosine transporter n=8 Tax=Nostocales TaxID=1161... [more]
A0A8J7BZI2_9CYAN4.140e-4832.56Tyrosine transporter n=1 Tax=Iningainema tapete BL... [more]
K9WZ78_9NOST4.830e-4834.18Amino acid permease n=2 Tax=Cylindrospermum TaxID=... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig901contigF-serratus_M_contig901:304251..313823 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score530.0
Seed ortholog evalue1.2e-147
Seed eggNOG ortholog2880.D7FW44
Hectar predicted targeting categorysignal peptide
EggNOG free text desc.Tryptophan/tyrosine permease family
EggNOG OGs2QSPD@2759,COG0814@1
Ec32 ortholog descriptionTryptophan/tyrosine permease
Ec32 orthologEc-01_003320.1
COG Functional cat.E
BiGG ReactioniEC55989_1330.EC55989_3581,iECO103_1326.ECO103_3910,iECO111_1330.ECO111_3985,iECO26_1355.ECO26_4267,iECSE_1348.ECSE_3447,iEcE24377_1341.EcE24377A_3643,iSSON_1240.SSON_3307
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons4
Model size1509
Cds size1494
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig901.20421.1prot_F-serratus_M_contig901.20421.1Fucus serratus malepolypeptideF-serratus_M_contig901 304266..313823 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932631.1160893-UTR-F-serratus_M_contig901:304250..3042651622932631.1160893-UTR-F-serratus_M_contig901:304250..304265Fucus serratus maleUTRF-serratus_M_contig901 304251..304265 +
1690964394.9682827-UTR-F-serratus_M_contig901:304250..3042651690964394.9682827-UTR-F-serratus_M_contig901:304250..304265Fucus serratus maleUTRF-serratus_M_contig901 304251..304265 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932631.1279032-CDS-F-serratus_M_contig901:304265..3043341622932631.1279032-CDS-F-serratus_M_contig901:304265..304334Fucus serratus maleCDSF-serratus_M_contig901 304266..304334 +
1690964394.9807184-CDS-F-serratus_M_contig901:304265..3043341690964394.9807184-CDS-F-serratus_M_contig901:304265..304334Fucus serratus maleCDSF-serratus_M_contig901 304266..304334 +
1622932631.1390345-CDS-F-serratus_M_contig901:311912..3121281622932631.1390345-CDS-F-serratus_M_contig901:311912..312128Fucus serratus maleCDSF-serratus_M_contig901 311913..312128 +
1690964394.9894958-CDS-F-serratus_M_contig901:311912..3121281690964394.9894958-CDS-F-serratus_M_contig901:311912..312128Fucus serratus maleCDSF-serratus_M_contig901 311913..312128 +
1622932631.1524224-CDS-F-serratus_M_contig901:312428..3130711622932631.1524224-CDS-F-serratus_M_contig901:312428..313071Fucus serratus maleCDSF-serratus_M_contig901 312429..313071 +
1690964394.9983554-CDS-F-serratus_M_contig901:312428..3130711690964394.9983554-CDS-F-serratus_M_contig901:312428..313071Fucus serratus maleCDSF-serratus_M_contig901 312429..313071 +
1622932631.198317-CDS-F-serratus_M_contig901:313257..3138231622932631.198317-CDS-F-serratus_M_contig901:313257..313823Fucus serratus maleCDSF-serratus_M_contig901 313258..313823 +
1690964395.010099-CDS-F-serratus_M_contig901:313257..3138231690964395.010099-CDS-F-serratus_M_contig901:313257..313823Fucus serratus maleCDSF-serratus_M_contig901 313258..313823 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig901.20421.1

>prot_F-serratus_M_contig901.20421.1 ID=prot_F-serratus_M_contig901.20421.1|Name=mRNA_F-serratus_M_contig901.20421.1|organism=Fucus serratus male|type=polypeptide|length=498bp
MKSAILLGTVLLEANLLQVHSFTQGPPLHLRRLVNRREQASDVFLLASTI
PGTPDSTSISTSFTVYDKAADEGKHSRRGEGGGGIINNSALVAGNMVGAG
VLALPHVAEGPGFLLSSAAMVVVWGYCLSSAIIVAECAGNGRETIQKMAE
ASVGRTAGNLMCASFLASNYLLLVAYISQGASLLPAVPALSSFLTSFVGD
IHLAPMVFTTLVGFTSLWSPVRFAEKANTALVGMIILSFGGLVALGLPHV
DVESLGLTPDASALPSMLPVAVCALTFQNVVPTVSKNLGGDPMKIRSSIA
IGSGVPLMSYILWNAVVLGNIGGIDSAGMTSPTDALGATSPLLGVLVAVF
SMSAIVTSFWGASFSLMSECTHLVDAMTSRGSLWDTKEQPPIVDDTRPID
ERTQHDGSAKTAAAAMLVLLPPAIVSTTCTDSFATALQYVGTYVNPFLYG
VAPAFMAYRLRDVENHKIQFPGGTTALAFVAAVTCGYMLWQTFFMTA*
back to top

mRNA from alignment at F-serratus_M_contig901:304251..313823+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig901.20421.1 ID=mRNA_F-serratus_M_contig901.20421.1|Name=mRNA_F-serratus_M_contig901.20421.1|organism=Fucus serratus male|type=mRNA|length=9573bp|location=Sequence derived from alignment at F-serratus_M_contig901:304251..313823+ (Fucus serratus male)
GCCGAAAGGCGTGGTATGAAGTCCGCAATCCTTCTAGGTACCGTGCTGCT CGAGGCCAACTTGCTACAAGTTCATTCCTTCACGGTGAGGAATTTATTTC GACGCATAAAATCCATAGGATTTCCTTGTTCCCGAACGAAAACTCCTCAA AAACCGGAACACGTCATCGAACTATGCTCTCAAAGGAACACCTTCTTGAG CTACAAGGCAGTATCGTAACGGTATAATATAATAAATACCGAACAATGAA CCACATCGCCGTTACTTTCTACATGCCCACTTCATACCAATAGTGGGTGT GGGAAAGAGAGGCGTATATTAATTGGTCCATAGTGACCTGCTAACGCAGC ACTCGTTCGGAACTACCTTGAGGTATGCTGGCCCTGTGCCGGCGGACTCT CGGCAGTGAACGCCATCGGTACGCAATTGCGTGACCCGATAAACTCGGGA CTTACCCGATGGCGTATGGCCGTTTAATATAAATATATGGACTCCGCCGC GGAACTCGGGATGAATCCCGTAAGTAAGCACCAGATTCAGCCTGAGTATG GAGATGGGCAGGCTGGCGCGGGACGGGACTGCCGAAACCGTCTCGCGAGA CCAAATTCTCAGGCACAAGCGCGGACAGGGGAATCTTCTTTTTCCTGTTC AGCTGACCACGAGTAGGATTGGTAACCTTACCCGGTTGATCCACATTCTT GCTATATGTGTGACCATACATAGACCTAAATATATAGCAACCGCTGAGAA ATGAACCCAAATTTACGTTTGTGGCAACCCACCACGTGCCCACTCGAGAC TTTGGTTTCGCGAGGTTTCACCAAGATTGGGTAATGGGAGTATTTATGTT GTGGGGGCCGGAGCGTTTTCAGAATTTGGCAGAAAAGCTGGGAAGCTTTA TTTTAGTACAGCGTGATGTATGTATGTGTGTATGTATATTTATTAAGTTG CATGTAACCGCGCAATCCGGCCCTGTAATCTACTCATTATATGCTACTGC CTGTAATGTATGTATGTATGTATATTTATTGCGAGCGTTTAGCGAGCTTC TAATCTGTATGCTGTATCAATTTAGGCTCGGGTGTATCAAAATACAGGGC ACTTTGACCAATCATGAATGTGCCGTATGTTCCTTTTCGTAATGCGTCCA CCCGACCGAATATGCTCAGAATTTTCCCCCCCTGTTTGGTTAAACCAACA CCTGTGTTCAGCTGACGATAGTTACCAAACTATCCTTTAGCGAGCGTATA GCGAGAGCTACCCTATCTTTAAATTGCACATAACCGCGCAATCCCGCCCT GTCATCCTAGTCATTCTATGCCACCCGTATTGATcctcCCAAGGGGGGAT CAATGAAACTTATTACGATGTATGTATGTATGTATGTATGTATGTATGTA TGTATGTATGTATGTATGTATGTATGTATGTATGTATCGTCATCACATAC ATAACCGGGTAAGGTTGCCAATCCTGCTCGTGGTCAGCTGAATTTAAACC ACCATACGCTATCAGGTCAGTCCCGAGTTTATCTGGTCACGCAATTGCGT ACCGATGGCGTTCACTGCCGAGAGTCCGCCGGCATAGGGCTAGTAAACCT CAAGGTAGTTCCAAACGGATGCTGCCTTGGCAGGTCGCCATGTATGTATG TATGCATGTATGTATGTATGTATGTATGTATGTATCGTGATCACATACAT AACCGGGTAAGGTTGCCAATCCTGCTCGTGGTCAGCTGAATTTAAACCAC CATACGCTATCGGGTCAGTCCCGAGTTTATCTGGTCACGCAATTACGTAC CGATGGCGTTCACTGCCGAGAGTCCGCCGGCATGGGGCTAGTAAACCTCA AGGTAGTTCCAAACGGGTGCTGCCTTGGCAGGTCACCATGTATGTATGTA TGTATGTATGTATCGTCATCACATACATAACCGGGTAAGGTTGCCAATCC TGCTCGTGGTCAGCTGAATTTAAACCACCATACGCTATCGGGTCAGTCCC GAGTTTATCTGGTCACGCAATTGCGTACCGATGGCGATCACTGCCGAGAG TCCGCCGGCATAGGGCTAGTAAACCTCAAGGTAGTTCCAAACGGGTGCTG CCTTGGTAGGTCACCATGGACCAATTAATATACCCCACTATTGATATGAA GCGGGCATGTTGAAGGTACAGTGAAATGTTGTAATCAAAGTTGAACGGCA TTCTCACTACCTGGTATTCTTATGATGCACGAAATTCTCCGCAGTATGAA TGTATGGTCATCACCTATAGCGAGGGTAAGGATCAACCCGGTAAGGTTGC CAATCCTGCTCGTGGTCAGCTGAGCAGGGAAAATGAATATTTCCCTGTCC TTGTTCGCGCCTGAGAATTTGGTATCACGAGACGGGTTGGGCAGTCCCGT CCCGCGTCAGCCTGCTCATCTTCATTCTCAGGCTGAATCTGGGGCTTTAC GGGATTCCTCCCGAGTTCCGCGGCGGCGTCCATTTATTTAGTTAAACCGC CATACGCCATCGGGACAGTCCCGAGTTTATCGGGTCACGCGATTGCGTAC CGATGGCGTTCACTGCCGAGAGAACGCCGGTACAGGGCCAGTAGTCTCCA AGGTAGTTCCAAACGGGTGCTGCCTTGGCAGGTCACCATGGACCAATTAA TACCCACCTCACTTTCACATACCCACTACACGCCGGTACTTCCAACATGC CCACTTCATACCATTAGTGGGGGTGGGAAAGAGAGGCGCAGATTAATTGG TCCATGGTGACCTGCCAAGGCAGCACCCGTTTCGAACTACCTTGAGGTTT ACTGGCCCTGTGCCGGCGAACTTTAAGCAGTGAACGCCATCGGTACGCAA TTGCGTGACCCGATAAACTCGGGACTGACCCGATGGCGTATGGCGGTTTC ATAATCGACGCCGCCGCGGAACTCGGGAGGAATCCCGTAAGTAAGCACCA GATTCAGCCTGAGTATGTAGATGAGCAGGCTGACGCGGGACTGGACGGCT GAACCCGTCTCGCGAGACCAAATTATCAGGCACGCACGGGGACAGGGGAA TATTATTTTCCCTGTTCAGCCGACCACGGGCAGGATTGGCAACCTTACCA GGTTGATCCATACTCTGCTATATGTGATGACCATACATATTGGTATGAAG TGGGCATGTTGAAAGTACAGGCGGGTAATCATCCTAGTACGTGGCGTACT TCGTACTGGTATATAATCAATGTAGGTATTATTGTTCCTTTCTTTTTGTC GGTTTTTGTTTTTTTGTTTTCAGTCTCACGTTGGAGCATTGTAGATGTTC TCCTGATATTTTCTTGTTCCGCAGATCACGTACCGGAATATTGGCAACCG CGTATTCTGTATTACTGGGTGTTAGTATGGTTGAGGCCCGGGTTAATGTG AAGAACACATCCACACACAGTAGAGAGAACTAACTGTACAAGAAGAGAGA GTGTGTCTGTCCCGTTTGTCGCGTCTATCAGAGGTTTTGGAAATAAGTAT CATCGATTTCCCTTTGGAAGGATCAATCCGGGTGACATAGAATGACTAGA ATGACAGGGCCGGATTACGCGGTTATGTGCAATTTAGTAAGTACACATAC ACACTGTATATATTATCCATGAGTACAGTAACAAGTGTTGGATTTTAGGG GTTTGAGAGCAATAACTTGTGGAAAAACTTTGGCAGCACCATCAGGTCGA AGATAGATGTAAATGAGTACTGTAGACTACCATATAGTTTTTAAACGTTT TCCAGACGTAGAGCCCCTTGCTTTTGTGCATGATGCACGAGTAGGGCTCG CGAGAAGTGTTCAATACGGGAATAATTGGCAGAGATCATAAGGCGATGTC TCAACCTAGATCTATACGAGTATGTATACTAACATTAAAAGAGCAAAATG CCTCAGAACTAGAAAAGGTGCCGTGATTCAATATTAAACTGGAGTGGGGA CCACCGAAATATACTGTACCAATATGTGTGTGTGTGTGTGTGTGTTTTCT TCCCATCCATTTTGGACATCAATGGACGTACCAGCCGGAGTCACACAGGA GGAAGGTCACACAGGATTTCGTATCCACCTTCCTTCTGCGGTGTGCGTGC CTTTAATTTTTATCGCGAGAAGGATTCAGCCATTCCTTTCCCTCGTCGAC CGTGAGGTCGAATTTTGTGTACTAACGAATTAATCGTTCTCCACCCGCTG GGCATTTTTATTTTGTTTTTTAGTTTTTAGTTAGAAAAATCCCGTTTACC GGGGTTGAACTCACGTCCCAACGTGTCAGAGGGTTACGAGGTTCCTCTGA GCTACCGGGGCGACCATGTTTTTTGTTTTGTTTTTGTTTTTGTTTTTGAG TGCCGATTATATGAGACTACTGGTAAGGTACTTCATACACAGGTGAAACA AATCGTCCGGAAATAAAAATAAATCGCGTCGGGAAAAAGTTGACACCTAC TAAAATCGTCCGCTTCGTTGCTGAGAACGCTGGCCGTGGGTAGACGACAA CAATCCGAGTCGATCGAGGTTGCTCTCGGTTTGAAGTGAGGAGGTTTGAT GAACTGTTTTGACATTGGCCGGTGACATTGCTTGTAGAGTCGCTTTTTGT CGCTATTTGGATCCCTGTTGGTCCGAGTAGCGGGCTGTCGCCATGATATG ACCCGTTGGCCTTCGTACTTCTATGTGAACACAAGCGGGGCTGGCATTTG ATTGTTCTATGGCTGACTTGATTAAGAAAAATCTGAACGCATCTAAACCT TCTGCGCATCCACCTTCAGGGGGAAAATTGTCAAAATATTTAGTTGGGAA CATTGGCTGTAGGGACGAAAACTCTTCACGGTATCAAAAGGGTTCATCAT CCCCAATGTAGTTACATAGGGTCAACAGTATAATATCGGGGAGAAGCCCG CCGTTATACTGTACACTTCCATTAATCGCCGTGCAGGGACACGCAAAACC ACAATCAAGGAACACAGTCACCGTAGTTTCTTCAGTTGCAAGGATAATAC GGAAAATGTGTGAATCAACAATAACTGTAGATGTGATCGCCTCTGAAACT GTCTGTATGTCTGTATCGCACTTGTCCACTATTAATACTATTAAAATTAT TATTACTACAGTACAGTACAGTCTATAGGTACGAGTGTACATAGAGCTAA ATCTACTAGCTCTACTATTAATAAGATAGATCTACTAAAGAGCTTCAACA ACAAAGACGGGAGATTACACTCGGTGGTTGTGAAGGCGTTCTTGGTCAGT TTGACAGACAGATGATTCTTCCTTCTGTATTTCTGGTCAACGCGGGACCA TAGCGAAGTCCATGTATGAGGAGCATCTGTGTGTCGTAGCCCTGACAAGT ATTGAGGGAGGAACCCAGTTCTTTCCGCTTGCCTCGTACTTCCTTGTGTG ATCTCCCACTGCTCTTCGTTTATTTCCAGGCGAATAACGGTGTCGTATTT CTGGATTATGAAGATAATTTACATCATCACGGTCCTCTGTTCTCGTTTCA ACATTATACTGGATTCGTCTTTATTGTTCGATGATGTACTGTTTTGTCTT CGCTGTTTTTCTGGTGTCCCTGCATGGCGATTAATGTAAGTGTACAGTAT AACGGTGGGCTTTTCCCCGATATTACACTGTTGACCCAATGTTACCACCA TAGGAGAACCCGTTTAAATGTCATGAAGAGGTTTTGTATTTGCAGCCTTT GATCCCACCTAAACGTTTTGACTCCTCCCCCCCCCCCCTAATCGGGAGAT GCTCAGAAGGTCTAGGTGCGTTCTGATTTTTCTTTAAACAAATTTGTTAG AACATGTTCTGTGGGGCTCGAGGTGATCCCAAATTTACCGGGGTCGGGTA GAGAATACAGGTACAGGTACATACGACAACACAAGGCAAGCACCTAGCGA GTCTAGGATATTGTTATAGCTTGTTGCCGTTTCGCTGTCAATTCGTGTGT AGCGAAGCATCACCGTAGACGAGGTGTTCTAACGGGACGAACACCCCGGG AGGCCTACTTACCAACTCAAGAAATGGACCACAAGGAAAAAGTTTTGATC GTTCGTTTCCAAAGCTGGAACGGCTCTTCGCTGACTTGTTTTCGGAAAAA GTGGGGGGAAAAATCTCCCCCCTCTAGCTGGTACGATACGCCTCGGGGCA CTTCGAACACCTACATGGTTCCCGGTGGGACTCTAATGATTGCTCAGGAG GTTTCGCTGCGTTCATATTTTTTCTTTACACGTGTCATACATCACCGTCG AGACAGCAGATCCCGAACCACACCGAATTTGTGAAAAGAGACCGATGTGC TGACCCGAAGAAGTTCACGACATACTAGTATTAGTATGGTATTTCAGGAC ACTAACAATATTAATACACAGAGTATTAATATTATAGAATACTAGACTAG AGTGTTTGCGGAACCCACATTTATGGCCCGCCGACCACCATTATTATGTT TCGCTCGAAGTTATATATATGATCGGTATTTCATGGGATTTTGCCCAAAA GCTATAAGTAGAAACTCATAATTATGAGTGCGGACCTGACGATTACTATA CCAGTACTATACAGCGATGTGGTTGGTCAACAATAATAACCTCGAACTGA TCTATTACTACGATAATTAATGGCCTTGCTAGGTGCTGGAATGCGGGAGC CAGACGAGAGCGATCTTTTTTTTTTTGCAACAGTAGTACGTATGATCGCT CTAGGATACCAGGCCGTCCCTTCTTGAGAGCCACAGCATCCAAAACATCT GGGCGGTTCAAGTTATTCGGCGGTACGAATGCTCGATGCTCTGTGCTGCA GAGCGCCTGAAGTTGTGTCAGCTTTAAGGGTGGCAGAGAGGTGCATGGTG CTGTTTAGCTGTTGGTAATGTAGAAATATACTTGTTGTTGGGGGAATGGC TGCTACTACAGTAACTAATTAACGCATTTGGCAAAGCGGCAGCGATCACG ACAAGAGACTCATATGCTACTCTACCGCCTAGGGTTGGAGGGGAAATTTT CGCTTTGTACGTACGCGCCCATGCGGGTACAACGCCCAGGGCGTTGAGTG TCTTTCTTTTTAGCCATTGTGTTGAGTTGTAAAGCAAGGGATGTTATTCT AATAACCAATTGTATATTTGAGGCGATATGTCAAATTCGAGAAATAGCCT GTCCCTGACCTAACATCAAGGGCGTTCACTTAATTTTTATGGGTTTCGCA AACACTCTAGTATCACTGTAGTAGAACACTAGAACAGCGCTTAGAGGATG TCACTGTTGCGAGCTGCCTGCTGTGTTTTTTTTTCCCTGCCTCAAGGTTA GAGTGTAATCGCTGGCATACCGGTAGCTCGATATTGTGCCTAGCATAGCT TAGCTTTCAGCTTCGAGGTACCATGTGCGTTCTTCTCGTAGCGAAACTAT TATGATTTTCATTAAAAACTACACATTGGAAAACTCCGAGGAATATACTG TATCTTGTACCTTGTACCATACCTTGTACCATACCTTGTACCATACCTTG TACCAGATATTATTAATAGTGGCCTTGAAACATTGAAACATCCACACTAT GAGATTACCAACCTCACTCTCTTCCCGGCCGGAATCTGTCACCACACATG CTTATCTTTTGCATTCTGTATTACGGTATGTATCATGCACGGCGTAACGT GTCTATTAACAGCAGGGCCCTCCGCTTCACCTCAGACGGCTGGTTAACCG CCGAGAACAGGCCAGCGATGTTTTTTTGCTAGCGAGCACCATACCTGGCA CACCAGACTCAACATCGATATCGACATCTTTCACTGTTTACGACAAAGCC GCCGATGAAGGAAAACATTCTCGACGAGGGGAAGGCGGAGGGGGCATCAT CAACAACTCGGCCCTGGTGGCTGGTAATGTGAGTTCAGTACGGCGGCTTA TATATTGGTGGCCTAGCAGAGTAGTCAATTTCGAGGGTACTTTAGAATCG CATCCGGGCACTGTGCAGCATAGACGAATAATAGGTGAAATACCTCGTAC TCTTCGAAGCGATTGCCTTTTCGAGATTGAAGCCCGTGGTATACGGTATT GCAAGAGCGACTGCTTTGGCCTGTGCCTTGACCGGTCCAACGGTTCAAGT TAGAGGTTAACTGGTTGTTGAAGACTGACCCCAAGCTTTTTAATTCGGCA TATTTACTCCTCTTCGTGTCGTTAATAGATGGTCGGAGCAGGTGTCCTCG CTTTGCCACACGTCGCCGAGGGACCAGGTTTCCTCCTGAGCTCAGCGGCG ATGGTGGTCGTGTGGGGATACTGTCTCTCGTCGGCAATAATCGTTGCGGA GTGCGCGGGGAATGGTCGCGAGACCATTCAGAAGATGGCTGAAGCTTCTG TTGGTCGCACCGCAGGAAACTTAATGTGTGCCTCATTTTTGGCGAGCAAT TACCTGCTCCTGGTAGCCTACATCAGCCAGGGTGCGTCGCTCCTACCCGC TGTCCCCGCGCTGTCTTCTTTTCTGACAAGCTTTGTGGGAGATATACATC TCGCGCCTATGGTGTTCACGACCTTGGTCGGATTCACGTCCCTTTGGAGT CCTGTTCGCTTCGCGGAGAAGGCAAACACGGCGCTGGTTGGTATGATAAT TTTGTCATTCGGCGGGCTGGTGGCATTAGGCTTACCCCACGTTGATGTGG AATCCTTGGGCCTGACTCCAGATGCATCTGCCCTGCCATCGATGTTGCCA GTGGCGGTCTGCGCACTCACGTTCCAGAACGTGGTACCCACAGTCTCGAA GAACCTCGGTGGTGACCCCATGAAAATACGATCATCGATCGCCATCGGCT CTGGAGTGCCACTCATGTCATGTAAGCTCGCGAAATGCGTACCCTCGTGC GTCAGGATGTCAGGATTTGTAGTCCAATTGCTGATCTCGATTATCCAGTG AAAGTACCGAGACGAGTATTCTGTCCTCCATACACGTCCTAATGCCTCTT ACGCCTGCCGATGTCCCGGTCGTACCGGTCGTTCCGGTCGCGCTTCGCAT GGCTCAGATATCCTCTGGAATGCTGTCGTGCTAGGAAACATAGGTGGTAT CGACTCGGCTGGGATGACGTCGCCCACGGATGCTCTGGGAGCGACTTCTC CTTTGTTGGGAGTGCTGGTCGCCGTGTTCAGCATGTCAGCGATAGTCACA TCGTTTTGGGGAGCTTCGTTCTCCCTCATGAGTGAGTGCACTCACTTGGT CGATGCCATGACGTCGCGTGGCTCCCTGTGGGACACCAAAGAGCAGCCCC CGATCGTGGATGACACGCGTCCCATCGATGAGAGGACTCAACATGACGGG TCAGCGAAGACAGCAGCAGCGGCTATGCTCGTGCTGCTGCCACCAGCAAT CGTTAGCACGACGTGCACAGACTCGTTCGCCACGGCCTTGCAGTACGTTG GTACGTACGTCAACCCGTTCTTGTACGGCGTTGCACCGGCGTTTATGGCA TATCGTCTACGTGATGTAGAAAACCACAAAATTCAGTTTCCTGGTGGAAC GACTGCTCTTGCGTTCGTAGCAGCGGTTACCTGCGGCTACATGTTATGGC AGACATTTTTTATGACTGCCTAA
back to top

Coding sequence (CDS) from alignment at F-serratus_M_contig901:304251..313823+

>mRNA_F-serratus_M_contig901.20421.1 ID=mRNA_F-serratus_M_contig901.20421.1|Name=mRNA_F-serratus_M_contig901.20421.1|organism=Fucus serratus male|type=CDS|length=2988bp|location=Sequence derived from alignment at F-serratus_M_contig901:304251..313823+ (Fucus serratus male)
ATGAAGTCCGCAATCCTTCTAGGTACCGTGCTGCTCGAGGCCAACTTGCT
ACAAGTTCATTCCTTCACGATGAAGTCCGCAATCCTTCTAGGTACCGTGC
TGCTCGAGGCCAACTTGCTACAAGTTCATTCCTTCACGCAGGGCCCTCCG
CTTCACCTCAGACGGCTGGTTAACCGCCGAGAACAGGCCAGCGATGTTTT
TTTGCTAGCGAGCACCATACCTGGCACACCAGACTCAACATCGATATCGA
CATCTTTCACTGTTTACGACAAAGCCGCCGATGAAGGAAAACATTCTCGA
CGAGGGGAAGGCGGAGGGGGCATCATCAACAACTCGGCCCTGGTGGCTGG
TAATCAGGGCCCTCCGCTTCACCTCAGACGGCTGGTTAACCGCCGAGAAC
AGGCCAGCGATGTTTTTTTGCTAGCGAGCACCATACCTGGCACACCAGAC
TCAACATCGATATCGACATCTTTCACTGTTTACGACAAAGCCGCCGATGA
AGGAAAACATTCTCGACGAGGGGAAGGCGGAGGGGGCATCATCAACAACT
CGGCCCTGGTGGCTGGTAATATGGTCGGAGCAGGTGTCCTCGCTTTGCCA
CACGTCGCCGAGGGACCAGGTTTCCTCCTGAGCTCAGCGGCGATGGTGGT
CGTGTGGGGATACTGTCTCTCGTCGGCAATAATCGTTGCGGAGTGCGCGG
GGAATGGTCGCGAGACCATTCAGAAGATGGCTGAAGCTTCTGTTGGTCGC
ACCGCAGGAAACTTAATGTGTGCCTCATTTTTGGCGAGCAATTACCTGCT
CCTGGTAGCCTACATCAGCCAGGGTGCGTCGCTCCTACCCGCTGTCCCCG
CGCTGTCTTCTTTTCTGACAAGCTTTGTGGGAGATATACATCTCGCGCCT
ATGGTGTTCACGACCTTGGTCGGATTCACGTCCCTTTGGAGTCCTGTTCG
CTTCGCGGAGAAGGCAAACACGGCGCTGGTTGGTATGATAATTTTGTCAT
TCGGCGGGCTGGTGGCATTAGGCTTACCCCACGTTGATGTGGAATCCTTG
GGCCTGACTCCAGATGCATCTGCCCTGCCATCGATGTTGCCAGTGGCGGT
CTGCGCACTCACGTTCCAGAACGTGGTACCCACAGTCTCGAAGAACCTCG
GTGGTGACCCCATGAAAATACGATCATCGATCGCCATCGGCTCTGGAGTG
CCACTCATGTCATATGGTCGGAGCAGGTGTCCTCGCTTTGCCACACGTCG
CCGAGGGACCAGGTTTCCTCCTGAGCTCAGCGGCGATGGTGGTCGTGTGG
GGATACTGTCTCTCGTCGGCAATAATCGTTGCGGAGTGCGCGGGGAATGG
TCGCGAGACCATTCAGAAGATGGCTGAAGCTTCTGTTGGTCGCACCGCAG
GAAACTTAATGTGTGCCTCATTTTTGGCGAGCAATTACCTGCTCCTGGTA
GCCTACATCAGCCAGGGTGCGTCGCTCCTACCCGCTGTCCCCGCGCTGTC
TTCTTTTCTGACAAGCTTTGTGGGAGATATACATCTCGCGCCTATGGTGT
TCACGACCTTGGTCGGATTCACGTCCCTTTGGAGTCCTGTTCGCTTCGCG
GAGAAGGCAAACACGGCGCTGGTTGGTATGATAATTTTGTCATTCGGCGG
GCTGGTGGCATTAGGCTTACCCCACGTTGATGTGGAATCCTTGGGCCTGA
CTCCAGATGCATCTGCCCTGCCATCGATGTTGCCAGTGGCGGTCTGCGCA
CTCACGTTCCAGAACGTGGTACCCACAGTCTCGAAGAACCTCGGTGGTGA
CCCCATGAAAATACGATCATCGATCGCCATCGGCTCTGGAGTGCCACTCA
TGTCATATATCCTCTGGAATGCTGTCGTGCTAGGAAACATAGGTGGTATC
GACTCGGCTGGGATGACGTCGCCCACGGATGCTCTGGGAGCGACTTCTCC
TTTGTTGGGAGTGCTGGTCGCCGTGTTCAGCATGTCAGCGATAGTCACAT
CGTTTTGGGGAGCTTCGTTCTCCCTCATGAGTGAGTGCACTCACTTGGTC
GATGCCATGACGTCGCGTGGCTCCCTGTGGGACACCAAAGAGCAGCCCCC
GATCGTGGATGACACGCGTCCCATCGATGAGAGGACTCAACATGACGGGT
CAGCGAAGACAGCAGCAGCGGCTATGCTCGTGCTGCTGCCACCAGCAATC
GTTAGCACGACGTGCACAGACTCGTTCGCCACGGCCTTGCAGTACGTTGG
TACGTACGTCAACCCGTTCTTGTACGGCGTTGCACCGGCGTTTATGGCAT
ATCGTCTACGTGATGTAGAAAACCACAAAATTCAGTTTCCTGGTGGAACG
ACTGCTCTTGCGTTCGTAGCAGCGGTTACCTGCGGCTACATGTTATGGCA
GACATTTTTTATGACTGCCTAAATATCCTCTGGAATGCTGTCGTGCTAGG
AAACATAGGTGGTATCGACTCGGCTGGGATGACGTCGCCCACGGATGCTC
TGGGAGCGACTTCTCCTTTGTTGGGAGTGCTGGTCGCCGTGTTCAGCATG
TCAGCGATAGTCACATCGTTTTGGGGAGCTTCGTTCTCCCTCATGAGTGA
GTGCACTCACTTGGTCGATGCCATGACGTCGCGTGGCTCCCTGTGGGACA
CCAAAGAGCAGCCCCCGATCGTGGATGACACGCGTCCCATCGATGAGAGG
ACTCAACATGACGGGTCAGCGAAGACAGCAGCAGCGGCTATGCTCGTGCT
GCTGCCACCAGCAATCGTTAGCACGACGTGCACAGACTCGTTCGCCACGG
CCTTGCAGTACGTTGGTACGTACGTCAACCCGTTCTTGTACGGCGTTGCA
CCGGCGTTTATGGCATATCGTCTACGTGATGTAGAAAACCACAAAATTCA
GTTTCCTGGTGGAACGACTGCTCTTGCGTTCGTAGCAGCGGTTACCTGCG
GCTACATGTTATGGCAGACATTTTTTATGACTGCCTAA
back to top