mRNA_F-serratus_M_contig900.20412.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig900.20412.1
Unique NamemRNA_F-serratus_M_contig900.20412.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig900.20412.1 vs. uniprot
Match: A0A6P0N5L4_9CYAN (Patatin-like protein n=1 Tax=Moorena sp. SIO3C2 TaxID=2607842 RepID=A0A6P0N5L4_9CYAN)

HSP 1 Score: 389 bits (999), Expect = 1.460e-118
Identity = 195/396 (49.24%), Postives = 271/396 (68.43%), Query Frame = 1
Query:    1 MENLFEEATVKAVIKKANPQSAAGPSGLRYSHLQAALCDELVEDLAAFATLVFSSRVLPQVFWTLHTSANLSALGQKARPVACGDVLRRVIGAVFCSRYGRKLADYFQPWGQYGVAVSSGVEIMALTATLGFEEGCIILSYDGANAFNSIYRHRFLPALAEIVPSVVPYASNLYAREPPKLLFALDGGGSEVVESARGVQQGCNLGPLCYSAGSLKILKEFRANPPVPGARAVSFIDDITVILPPESSLDIAAIGKVTEWLQERLGIEGISLNRRKSQALLADGVGPEQLTEEQRVAMDTTGLTVVRQGMRVVGVPVGTEQFQRDFLQEAVNGEPAELVRALAPMEDAQASFQMLRLSATSRLSHLLRTVPPSITGQAAASYDALVEWALASIIAG 1188
            +E  F   TV A I++ NPQ + GPSGLR+S LQ++L  EL E +A   +++F    LP  FW LHTSANLSA+G K RP+A GD+ RR++G V C +YG  LA++F+P GQYGVAV  G E++A  A L  ++G  +L+YD  NAFNS+ R   LPALA+++P ++PYA+N+YAREPPKLL+  D G   V+ SA GVQQGCNLGPLCYSAG LK+L++FRANPPV GA+ ++FIDD+ V+LP   + + AA   VT W+Q  +   G++LNR KS+ L   G   +   E+ R  ++ T L V   GMR+VGVPVG   + +    +   GEP +L++ +A ++DAQAS Q+LR SA +RL+ LLR++PP +T +AA+ +D  VE  L +I+ G
Sbjct: 1154 VEEPFATETVTATIRRGNPQGSPGPSGLRFSLLQSSLTPELCEAIAKLCSVIFDGSHLPDSFWQLHTSANLSAIGDKCRPIAVGDLFRRIVGGVICRQYGPSLAEHFEPQGQYGVAVPGGTELLAARAFLAHQKGQCLLAYDARNAFNSMKRSAILPALADLIPPMLPYATNIYAREPPKLLYKTDSG-MAVIPSATGVQQGCNLGPLCYSAGLLKLLRDFRANPPVVGAQLMAFIDDLVVLLPKNHACNPAAAEAVTTWIQANMQPLGVALNRSKSKILFPPGTDVKSWPEKDRETLERTQLAVAEGGMRIVGVPVGEPDYIKRSALDIARGEPTDLLKEIASLDDAQASLQILRFSAATRLNFLLRSLPPDLTKEAASEFDKSVEQTLETILNG 1548          
BLAST of mRNA_F-serratus_M_contig900.20412.1 vs. uniprot
Match: A0A6H5KGJ4_9PHAE (Reverse transcriptase domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGJ4_9PHAE)

HSP 1 Score: 365 bits (937), Expect = 5.290e-118
Identity = 197/394 (50.00%), Postives = 257/394 (65.23%), Query Frame = 1
Query:   13 FEEATVKAVIKKANPQSAAGPSGLRYSHLQAA-LCDELVEDLAAFATLVFS-SRVLPQVFWTLHTSANLSALGQKARPVACGDVLRRVIGAVFCSRYGRKLADYFQPWGQYGVAVSSGVEIMALTATLGFEEGCIILSYDGANAFNSIYRHRFLPALAEIVPSVVPYASNLYAREPPKLLFALDGGGSEVVESARGVQQGCNLGPLCYSAGSLKILKEFRANPPVPGARAVSFIDDITVILPPESSLDIAAIGKVTEWLQERLGIEGISLNRRKSQALLADGVGPEQLTEEQRVAMDTTGLTVVRQGMRVVGVPVGTEQFQRDFLQEAVNGEPAELVRALAPMEDAQASFQMLRLSATSRLSHLLRTVPPSITGQAAASYDALVEWALASIIAG 1188
            FE   +K  +KKANPQSA GP GLR+S+LQA  + D   E LA F+  VF     LP  FW LHTSANLSALG+K RP+A G VLRR+I   FC +Y   +A+ F+   Q+G  V  GVEI+A TA L  ++G  ILS+DG NA+NS+ R   LPA+A   P +V Y  N+YAR   KLLF ++ G  EVV S RGVQQGCNLG   +  G L I+KEF   PPVPGA+ + ++DD+ V LPP  + +I AI  VT W+Q+ L  +GI L+  KS+ L  +G+    LT +++  +  TGL+V   GM +VGVPVGTE FQR F+     G PAEL+R L+ ++D QAS+Q+LRLS   RL HLLRT+ PSIT  AA  +D L+ WA++ I+ G
Sbjct:  120 FEIKFIKQTVKKANPQSAPGPDGLRFSYLQAGGMSDFFTETLADFSFKVFYYGDELPDFFWNLHTSANLSALGEKKRPIAVGGVLRRIISGSFCHQYKGGIANIFEAANQFGGGVPGGVEIVASTAALSHQQGSTILSFDGKNAYNSMRRSSILPAVATHTPHLVKYFGNIYARTKAKLLFKMEDGSIEVVLSQRGVQQGCNLGGFGFCVGLLDIMKEFNNKPPVPGAKLIGYVDDLQVHLPPGLARNIQAIATVTNWIQDHLLQKGIELSLPKSKVLFPEGLFFSSLTNDEQRDLTKTGLSVAEGGMAIVGVPVGTECFQRSFVTNFARGNPAELIRRLSTLDDPQASYQLLRLSGVPRLFHLLRTIAPSITNTAAREHDNLMIWAVSKIVLG 513          
BLAST of mRNA_F-serratus_M_contig900.20412.1 vs. uniprot
Match: A0A6H5JCM0_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCM0_9PHAE)

HSP 1 Score: 367 bits (941), Expect = 4.960e-116
Identity = 194/394 (49.24%), Postives = 258/394 (65.48%), Query Frame = 1
Query:   13 FEEATVKAVIKKANPQSAAGPSGLRYSHLQAA-LCDELVEDLAAFATLVFS-SRVLPQVFWTLHTSANLSALGQKARPVACGDVLRRVIGAVFCSRYGRKLADYFQPWGQYGVAVSSGVEIMALTATLGFEEGCIILSYDGANAFNSIYRHRFLPALAEIVPSVVPYASNLYAREPPKLLFALDGGGSEVVESARGVQQGCNLGPLCYSAGSLKILKEFRANPPVPGARAVSFIDDITVILPPESSLDIAAIGKVTEWLQERLGIEGISLNRRKSQALLADGVGPEQLTEEQRVAMDTTGLTVVRQGMRVVGVPVGTEQFQRDFLQEAVNGEPAELVRALAPMEDAQASFQMLRLSATSRLSHLLRTVPPSITGQAAASYDALVEWALASIIAG 1188
            FE   +K  +KKANPQSA GP GLR+S+LQA  + D   E LA F+  VF     LP  FW LHTSANLSALG+K RP+A G VLRR+I   FC +Y   +A+ F+   Q+G  V  GVEI+A TA L  ++G  ILS+DG NA+NS+ R   LPA+A   P +V Y  N+YAR   KLLF ++ G  EVV S RGVQQGCNLG   +  G L I+KEF   PPVPG + + ++DD+   LPP  + ++ AI  VT W+QERL  +GI L+  KS+ L  +G+    LT +++  +   GL+V   GM VVG+PVGTE+FQR+F+ +   G+PAEL+  LA ++D QAS+Q+LRLS   RL HLLRT+ PSIT  AA  +D ++ WA++ I+ G
Sbjct:  120 FEIKFIKQTVKKANPQSAPGPDGLRFSYLQAGGMSDFFTETLADFSFKVFYYGDELPDFFWNLHTSANLSALGEKKRPIAVGGVLRRIISGSFCRQYKGGIANIFEAANQFGGGVPGGVEIVASTAALSHQQGSTILSFDGKNAYNSMRRSSILPAVATHTPHLVKYFGNIYARTKAKLLFKMEDGSIEVVLSQRGVQQGCNLGGFGFCVGLLDIMKEFNNKPPVPGVKLIGYVDDLQAHLPPGLARNMQAISTVTNWIQERLSQKGIELSLPKSKVLFPEGLCMSSLTNDEQQQLTKIGLSVTEGGMPVVGIPVGTEEFQRNFVSKIARGDPAELILRLATLDDPQASYQLLRLSGVPRLFHLLRTIAPSITNSAAKIHDNMMMWAMSKIVLG 513          
BLAST of mRNA_F-serratus_M_contig900.20412.1 vs. uniprot
Match: A0A6H5LN63_9PHAE (Reverse transcriptase domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LN63_9PHAE)

HSP 1 Score: 368 bits (944), Expect = 2.310e-114
Identity = 194/394 (49.24%), Postives = 258/394 (65.48%), Query Frame = 1
Query:   13 FEEATVKAVIKKANPQSAAGPSGLRYSHLQAA-LCDELVEDLAAFATLVFS-SRVLPQVFWTLHTSANLSALGQKARPVACGDVLRRVIGAVFCSRYGRKLADYFQPWGQYGVAVSSGVEIMALTATLGFEEGCIILSYDGANAFNSIYRHRFLPALAEIVPSVVPYASNLYAREPPKLLFALDGGGSEVVESARGVQQGCNLGPLCYSAGSLKILKEFRANPPVPGARAVSFIDDITVILPPESSLDIAAIGKVTEWLQERLGIEGISLNRRKSQALLADGVGPEQLTEEQRVAMDTTGLTVVRQGMRVVGVPVGTEQFQRDFLQEAVNGEPAELVRALAPMEDAQASFQMLRLSATSRLSHLLRTVPPSITGQAAASYDALVEWALASIIAG 1188
            FE   +K  +KKANPQSA GP GLR+S+LQA  + D   E LA F+  VF     LP  FW LHTSANLSALG+K RP+A G VLRR+I   FC +Y   +A+ F+   Q+G  V  GVEI+A TA L  ++G  ILS+DG NA+NS+ R   LPA+A   P +V Y  N+YAR   KLLF ++ G  EVV S RGVQQGCNLG   +  G L I+KEF   PPVPG + + ++DD+   LPP  + ++ AI  VT W+QERL  +GI L+  KS+ L  +G+    LT +++  +   GL+V   GM VVG+PVGTE+FQR+F+ +   G+PAEL+  LA ++D QAS+Q+LRLS   RL HLLRT+ PSIT  AA  +D ++ WA++ I+ G
Sbjct:  120 FEIKFIKQTVKKANPQSAPGPDGLRFSYLQAGGMSDSFTETLADFSFKVFYYGDELPDFFWNLHTSANLSALGEKKRPIAVGGVLRRIISGSFCRQYKGGIANIFEAANQFGGGVPGGVEIVASTAALSHQQGSTILSFDGKNAYNSMRRSSILPAVATHTPHLVKYFGNIYARTKAKLLFKMEDGSIEVVLSQRGVQQGCNLGGFGFCVGLLDIMKEFNNKPPVPGVKLIGYVDDLQAHLPPGLARNMQAISTVTNWIQERLSQKGIELSLPKSKVLFPEGLCMSSLTNDEQQQLTKIGLSVAEGGMPVVGIPVGTEEFQRNFVSKIARGDPAELILRLATLDDPQASYQLLRLSGVPRLFHLLRTIAPSITNSAAKIHDNMMMWAMSKIVLG 513          
BLAST of mRNA_F-serratus_M_contig900.20412.1 vs. uniprot
Match: A0A6H5KSY9_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSY9_9PHAE)

HSP 1 Score: 323 bits (829), Expect = 2.480e-103
Identity = 173/361 (47.92%), Postives = 230/361 (63.71%), Query Frame = 1
Query:  109 LCDELVEDLAAFATLVFS-SRVLPQVFWTLHTSANLSALGQKARPVACGDVLRRVIGAVFCSRYGRKLADYFQPWGQYGVAVSSGVEIMALTATLGFEEGCIILSYDGANAFNSIYRHRFLPALAEIVPSVVPYASNLYAREPPKLLFALDGGGSEVVESARGVQQGCNLGPLCYSAGSLKILKEFRANPPVPGARAVSFIDDITVILPPESSLDIAAIGKVTEWLQERLGIEGISLNRRKSQALLADGVGPEQLTEEQRVAMDTTGLTVVRQGMRVVGVPVGTEQFQRDFLQEAVNGEPAELVRALAPMEDAQASFQMLRLSATSRLSHLLRTVPPSITGQAAASYDALVEWALASIIAG 1188
            + D   E LA F+  VF     LP  FW LHTSANLSALG+K RP+A G VLRR+I   FC +Y   +A+ F+   Q+G  V  GVEI+A TA L  ++G  ILS+DG NA+NS+ R   LPA+A   P +  Y  N+YAR   KLLF ++ G  EVV S RGVQQGCNLG   +  G L I+KEF   PPVPGA+ + ++DD+ V LPP  + +I AI  VT W+Q+ L  +GI L+  KS  L  +G+    LT +++  +  TGL+V   GM +VGVPVGTE FQR F+     G PAEL+  L+ ++D Q S+Q+LR+S   RL HLLRT+ PSIT  AA  +D+L+ WA++ I+ G
Sbjct:    1 MSDYFTETLADFSFKVFYYGDELPDFFWNLHTSANLSALGEKKRPIAVGGVLRRIISGSFCRQYKGGIANIFEAANQFGGGVPGGVEIVASTAALSHQQGSTILSFDGKNAYNSMRRSSILPAVATHTPHLAKYFGNIYARTKAKLLFKMEDGSIEVVLSQRGVQQGCNLGGFGFCVGLLDIMKEFNNKPPVPGAKLIGYVDDLQVHLPPGLARNIQAIATVTNWIQDHLLQKGIELSLPKSNVLFPEGLFFSSLTNDEQRDLTKTGLSVAEGGMAIVGVPVGTECFQRSFVTNFARGIPAELIPRLSTLDDPQTSYQLLRMSGVPRLFHLLRTIAPSITNTAAREHDSLMIWAVSKIVLG 361          
BLAST of mRNA_F-serratus_M_contig900.20412.1 vs. uniprot
Match: A0A6H5K1H0_9PHAE (Reverse transcriptase domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1H0_9PHAE)

HSP 1 Score: 328 bits (841), Expect = 8.060e-99
Identity = 172/361 (47.65%), Postives = 233/361 (64.54%), Query Frame = 1
Query:  109 LCDELVEDLAAFATLVFS-SRVLPQVFWTLHTSANLSALGQKARPVACGDVLRRVIGAVFCSRYGRKLADYFQPWGQYGVAVSSGVEIMALTATLGFEEGCIILSYDGANAFNSIYRHRFLPALAEIVPSVVPYASNLYAREPPKLLFALDGGGSEVVESARGVQQGCNLGPLCYSAGSLKILKEFRANPPVPGARAVSFIDDITVILPPESSLDIAAIGKVTEWLQERLGIEGISLNRRKSQALLADGVGPEQLTEEQRVAMDTTGLTVVRQGMRVVGVPVGTEQFQRDFLQEAVNGEPAELVRALAPMEDAQASFQMLRLSATSRLSHLLRTVPPSITGQAAASYDALVEWALASIIAG 1188
            + D   E LA F+  VF     LP   W LHTSANLSALG+K RP+A G VLRR+I   F  +Y   +A+ F+   Q+G  V  GVEI+A TA L  ++G  ILS+DG NA+NS+ R   LPA+A + P +V Y  N+YAR   KLLF ++ G  EVV S RGVQQGCNLG   +  G L I+KEF   PPVPG + + ++DD+   LPP  + ++ AI  VT W+QERL  +GI L+  KS+ L  +G+    LT +++  +   GL+V   GM VVG+PVGTE+FQR+F+ +   G+PAEL+  LA ++D QAS+Q+LRLS   RL HLLRT+ PSIT  AA  +D ++ WA++ I+ G
Sbjct:    1 MSDSFTETLADFSFKVFYYGDELPDFLWNLHTSANLSALGEKKRPIAVGGVLRRIISGSFYRQYKGGIANIFEAANQFGGGVPGGVEIVASTAALSHQQGSTILSFDGKNAYNSMRRSSILPAVATLTPHLVKYFGNIYARTKAKLLFKMEDGSIEVVLSQRGVQQGCNLGGFGFCVGLLDIMKEFNNKPPVPGVKLIGYVDDLQAHLPPGLARNMQAISTVTNWIQERLSQKGIELSLPKSKVLFPEGLCMSSLTNDEQQQLTKIGLSVAEGGMPVVGIPVGTEEFQRNFVSKIARGDPAELILRLATLDDPQASYQLLRLSGVPRLFHLLRTIAPSITNSAAKIHDNMMMWAMSKIVLG 361          
BLAST of mRNA_F-serratus_M_contig900.20412.1 vs. uniprot
Match: A0A6H5KQ62_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQ62_9PHAE)

HSP 1 Score: 261 bits (666), Expect = 3.280e-80
Identity = 140/278 (50.36%), Postives = 179/278 (64.39%), Query Frame = 1
Query:   13 FEEATVKAVIKKANPQSAAGPSGLRYSHLQAA-LCDELVEDLAAFATLVFS-SRVLPQVFWTLHTSANLSALGQKARPVACGDVLRRVIGAVFCSRYGRKLADYFQPWGQYGVAVSSGVEIMALTATLGFEEGCIILSYDGANAFNSIYRHRFLPALAEIVPSVVPYASNLYAREPPKLLFALDGGGSEVVESARGVQQGCNLGPLCYSAGSLKILKEFRANPPVPGARAVSFIDDITVILPPESSLDIAAIGKVTEWLQERLGIEGISLNRRKSQAL 840
            FE   +K  +KKANPQSA GP GLR+S+LQA  + D   E LA F+  VF     LP  FW LHTSANLSALG+K RP+A G VLRR+I   FC +Y   +A+ F+   Q+G  V  GVEI+A TA L  ++G  ILS+DG NA+NS+ R   LPA+A   P +V Y  N+YAR   KLLF ++ G  EVV S RGVQQGCNLG   +  G L I+KEF   PPVPG + + ++DD+   LPP  + ++ AI  VT W+QERL  +GI L+  KS+ L
Sbjct:  120 FEIKFIKQTVKKANPQSAPGPDGLRFSYLQAGGMSDFFTETLADFSFKVFYYGDELPDFFWNLHTSANLSALGEKKRPIAVGGVLRRIISGSFCRQYKGGIANIFEAANQFGGGVPGGVEIVASTAALSHQQGSTILSFDGKNAYNSMRRSSILPAVATHTPHLVKYFGNIYARTKAKLLFKMEDGSIEVVLSQRGVQQGCNLGGFGFCVGLLDIMKEFNNKPPVPGVKLIGYVDDLQAHLPPGLARNMQAISTVTNWIQERLSQKGIELSLPKSKVL 397          
BLAST of mRNA_F-serratus_M_contig900.20412.1 vs. uniprot
Match: A0A6H5K541_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K541_9PHAE)

HSP 1 Score: 196 bits (498), Expect = 1.340e-56
Identity = 102/212 (48.11%), Postives = 139/212 (65.57%), Query Frame = 1
Query:  553 LDGGGSEVVESARGVQQGCNLGPLCYSAGSLKILKEFRANPPVPGARAVSFIDDITVILPPESSLDIAAIGKVTEWLQERLGIEGISLNRRKSQALLADGVGPEQLTEEQRVAMDTTGLTVVRQGMRVVGVPVGTEQFQRDFLQEAVNGEPAELVRALAPMEDAQASFQMLRLSATSRLSHLLRTVPPSITGQAAASYDALVEWALASIIAG 1188
            ++ G  E+V S RGVQQGCNLG   +S G L  +KEF   PPVPGA+ + ++DD+ V LPP  + +I AI  VT W+Q+ L  +GI L+  KS+ L  +G     LT +++  +  TGL+V   GM +VGVPVGTE FQR F+     G PAEL+R L+ ++D QAS+Q+LRLS   RL HLLRT+ PSIT  AA  +D L+ WA++ I+ G
Sbjct:    1 MEDGSIEIVRSQRGVQQGCNLGGFGFSVGLLDTMKEFNDKPPVPGAKLIGYVDDLQVHLPPGLARNIQAIATVTNWIQDHLLQKGIELSLPKSKVLFPEGFFFSSLTNDEQRDLTKTGLSVAEGGMAIVGVPVGTECFQRSFVTNFARGNPAELIRRLSTLDDPQASYQLLRLSGVPRLFHLLRTIAPSITNTAAREHDNLMIWAVSKIVLG 212          
BLAST of mRNA_F-serratus_M_contig900.20412.1 vs. uniprot
Match: A0A6H5JH58_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH58_9PHAE)

HSP 1 Score: 186 bits (473), Expect = 2.760e-48
Identity = 129/396 (32.58%), Postives = 203/396 (51.26%), Query Frame = 1
Query:    4 ENLFEEATVKAVIKKANPQSAAGPSGLRYSHLQAALCDELV-EDLAA-----FATLVFSSRVLPQVFWTLHTSANLSALGQKARPVACGDVLRRVIGAVFCSRYGRKLADYFQPWGQYGVAVSSGVEIMALTATLGFEEGCIILSYDGANAFNSIYRHRFLPALAEIVPSVVPYASNLYAREPPKLLFALDGGGSEVVESARGVQQGCNLGPLCYSAGSLKILKEFRANPPVPGARAVSFIDDITVILPPESSLDIAAIGKVTEWLQERLGIEGISLNRRKSQALLADGVGPEQLTEEQRVAMDTTGLTVVRQGMRVVGVPVGTEQFQRDFLQEAVNGEPAE-LVRALAPMEDAQASFQMLRLSATSRLSHLLRTVPPSITGQAAASYDALVEWAL 1170
            E  F+   +  VI   +  S AG  G R+SHL++    ++  ED        +  LV      P  FWTL   ++L ALG+K RPV  G   RR+I A    ++  KL + F+   Q+GVAV+ GVE +A+ A L  + G  I+  D +NAFN+  R   +   A+ +P +V Y +  Y   P   ++ +D G    +E   GVQQG  +GP  +S   + I+ + +      G    +++DDIT+ L   +   + A+  + + L E     GI +NR KS AL   G     +T++QR  ++  GLTV  +G+ VVGVP+GT+ + R+F  + +    AE L R L  M D Q +  +  LS   R +++ R + P++T +A    D +V+WAL
Sbjct:  535 EEEFDPQVLIEVINSRSSNSGAGNDGQRFSHLKSITNTKIGREDFCGAMSSLWRRLVNDPNTFPPEFWTLWKQSSLIALGEKCRPVCIGMTWRRLIAAGTVRQWKPKLEEMFREANQFGVAVAGGVERVAMEAQLVHQTGNWIIQTDCSNAFNTGKRTAIMAQAAKSLPDLVGYIARCYDEIPATAVYEMDSGERRTLECTSGVQQGDGMGPPLFSLILIPIILKLQDKYKPLGVAFKAYMDDITLHLKDLTEESVQAMTDLVDELAE----VGIVVNRAKSSALPPPG---HMITDQQRRLLEGVGLTVAGEGITVVGVPIGTDNYVREFAMKVITEGGAEKLARMLPLMSDRQVANLITSLSLIQRSAYIERGIDPTLTKEACERLDNMVQWAL 923          
BLAST of mRNA_F-serratus_M_contig900.20412.1 vs. uniprot
Match: A0A6H5JLD7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLD7_9PHAE)

HSP 1 Score: 165 bits (418), Expect = 1.680e-44
Identity = 81/179 (45.25%), Postives = 119/179 (66.48%), Query Frame = 1
Query:  652 LKEFRANPPVPGARAVSFIDDITVILPPESSLDIAAIGKVTEWLQERLGIEGISLNRRKSQALLADGVGPEQLTEEQRVAMDTTGLTVVRQGMRVVGVPVGTEQFQRDFLQEAVNGEPAELVRALAPMEDAQASFQMLRLSATSRLSHLLRTVPPSITGQAAASYDALVEWALASIIAG 1188
            +KEF   PPVPG + + ++DD+   LPP  + ++ AI  VT W+QERL  +GI L+  KS+ L  +G+    LT +++  +   GL+V   GM VVG+P GTE+FQR+F+ +   G+PAEL+  LA ++D QAS+Q+LRLS   RL HLLRT+ PSIT  AA  +D ++ WA++ I+ G
Sbjct:    1 MKEFNNKPPVPGVKLIGYVDDLQAHLPPGLARNMQAISTVTNWIQERLSQKGIELSLPKSKVLFPEGLCMSSLTNDEQQQLTKIGLSVAEGGMPVVGIPAGTEEFQRNFVSKIARGDPAELILRLATLDDPQASYQLLRLSGVPRLFHLLRTIAPSITNSAAKIHDNMMMWAMSKIVLG 179          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig900.20412.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6P0N5L4_9CYAN1.460e-11849.24Patatin-like protein n=1 Tax=Moorena sp. SIO3C2 Ta... [more]
A0A6H5KGJ4_9PHAE5.290e-11850.00Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JCM0_9PHAE4.960e-11649.24Reverse transcriptase domain-containing protein (F... [more]
A0A6H5LN63_9PHAE2.310e-11449.24Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KSY9_9PHAE2.480e-10347.92Reverse transcriptase domain-containing protein (F... [more]
A0A6H5K1H0_9PHAE8.060e-9947.65Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KQ62_9PHAE3.280e-8050.36Reverse transcriptase domain-containing protein (F... [more]
A0A6H5K541_9PHAE1.340e-5648.11Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JH58_9PHAE2.760e-4832.58Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JLD7_9PHAE1.680e-4445.25Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig900contigF-serratus_M_contig900:279009..280196 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score109.4
Seed ortholog evalue3.9e-21
Seed eggNOG ortholog400682.PAC_15708731
Preferred nameCWC27
KEGG koko:K01802,ko:K12737
Hectar predicted targeting categoryother localisation
GOsGO:0000375,GO:0000377,GO:0000398,GO:0000413,GO:0003674,GO:0003755,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005681,GO:0005684,GO:0005911,GO:0006139,GO:0006396,GO:0006397,GO:0006464,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008380,GO:0009506,GO:0009987,GO:0010467,GO:0016070,GO:0016071,GO:0016853,GO:0016859,GO:0018193,GO:0018208,GO:0019538,GO:0030054,GO:0031974,GO:0031981,GO:0032991,GO:0034641,GO:0036211,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0046483,GO:0055044,GO:0070013,GO:0071012,GO:0071013,GO:0071704,GO:0090304,GO:0140096,GO:1901360,GO:1901564,GO:1902494,GO:1990904
EggNOG free text desc.peptidyl-prolyl cis-trans isomerase activity
EggNOG OGsCOG0652@1,KOG0885@2759
EC5.2.1.8
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03041,ko03110
Exons1
Model size1188
Cds size1188
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932628.2535644-CDS-F-serratus_M_contig900:279008..2801961622932628.2535644-CDS-F-serratus_M_contig900:279008..280196Fucus serratus maleCDSF-serratus_M_contig900 279009..280196 -
1690964393.3197186-CDS-F-serratus_M_contig900:279008..2801961690964393.3197186-CDS-F-serratus_M_contig900:279008..280196Fucus serratus maleCDSF-serratus_M_contig900 279009..280196 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig900.20412.1prot_F-serratus_M_contig900.20412.1Fucus serratus malepolypeptideF-serratus_M_contig900 279009..280196 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig900.20412.1

>prot_F-serratus_M_contig900.20412.1 ID=prot_F-serratus_M_contig900.20412.1|Name=mRNA_F-serratus_M_contig900.20412.1|organism=Fucus serratus male|type=polypeptide|length=396bp
MENLFEEATVKAVIKKANPQSAAGPSGLRYSHLQAALCDELVEDLAAFAT
LVFSSRVLPQVFWTLHTSANLSALGQKARPVACGDVLRRVIGAVFCSRYG
RKLADYFQPWGQYGVAVSSGVEIMALTATLGFEEGCIILSYDGANAFNSI
YRHRFLPALAEIVPSVVPYASNLYAREPPKLLFALDGGGSEVVESARGVQ
QGCNLGPLCYSAGSLKILKEFRANPPVPGARAVSFIDDITVILPPESSLD
IAAIGKVTEWLQERLGIEGISLNRRKSQALLADGVGPEQLTEEQRVAMDT
TGLTVVRQGMRVVGVPVGTEQFQRDFLQEAVNGEPAELVRALAPMEDAQA
SFQMLRLSATSRLSHLLRTVPPSITGQAAASYDALVEWALASIIAG
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mRNA from alignment at F-serratus_M_contig900:279009..280196-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig900.20412.1 ID=mRNA_F-serratus_M_contig900.20412.1|Name=mRNA_F-serratus_M_contig900.20412.1|organism=Fucus serratus male|type=mRNA|length=1188bp|location=Sequence derived from alignment at F-serratus_M_contig900:279009..280196- (Fucus serratus male)
ATGGAGAACCTATTCGAGGAGGCCACGGTAAAAGCTGTAATCAAGAAAGC CAACCCACAAAGCGCGGCAGGTCCGTCTGGACTACGCTACAGCCATCTGC AGGCCGCGCTGTGCGATGAACTGGTCGAGGACCTCGCGGCGTTCGCGACG CTTGTTTTTTCCAGCCGTGTTTTGCCCCAAGTATTCTGGACACTGCACAC GAGTGCCAACCTTTCCGCGTTGGGGCAGAAGGCGAGACCAGTGGCGTGCG GCGATGTCTTGCGGAGAGTTATTGGCGCTGTTTTCTGCAGCCGATACGGT AGGAAACTGGCGGACTACTTCCAGCCCTGGGGCCAGTACGGCGTAGCGGT TTCAAGCGGAGTAGAGATAATGGCCCTCACAGCGACACTGGGTTTCGAAG AGGGTTGCATCATTCTCTCATACGACGGAGCAAACGCCTTTAACAGCATA TACCGCCACAGGTTCCTGCCCGCGCTAGCCGAAATCGTTCCCTCAGTGGT CCCCTACGCATCAAACCTGTACGCACGGGAACCCCCAAAACTTTTGTTTG CACTAGACGGTGGAGGTTCCGAAGTGGTTGAGTCAGCTCGGGGAGTACAG CAAGGATGTAATCTAGGTCCACTTTGCTACAGCGCAGGCTCACTGAAGAT CCTAAAAGAATTCAGAGCCAATCCACCGGTGCCAGGAGCGAGAGCGGTTT CGTTCATCGACGACATCACCGTCATTCTACCACCGGAAAGTTCTCTCGAT ATTGCGGCTATAGGAAAAGTTACTGAATGGCTGCAGGAACGCCTGGGGAT AGAAGGTATCTCGCTGAACCGAAGGAAATCGCAGGCCCTGCTAGCAGATG GAGTGGGGCCAGAACAACTGACGGAAGAGCAGCGAGTTGCAATGGATACT ACAGGGCTCACGGTGGTCCGACAGGGGATGAGGGTTGTGGGAGTACCAGT CGGAACAGAACAGTTCCAGCGCGATTTCTTACAGGAGGCGGTTAATGGAG AGCCAGCTGAGCTCGTGAGGGCGCTGGCCCCAATGGAGGATGCCCAAGCG AGCTTTCAGATGTTGCGTCTATCTGCCACCTCTCGCCTCTCGCACCTGCT CCGAACAGTCCCGCCCTCCATAACAGGCCAAGCTGCAGCAAGCTATGACG CTTTGGTGGAGTGGGCGTTGGCGTCTATCATAGCCGGC
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Coding sequence (CDS) from alignment at F-serratus_M_contig900:279009..280196-

>mRNA_F-serratus_M_contig900.20412.1 ID=mRNA_F-serratus_M_contig900.20412.1|Name=mRNA_F-serratus_M_contig900.20412.1|organism=Fucus serratus male|type=CDS|length=2376bp|location=Sequence derived from alignment at F-serratus_M_contig900:279009..280196- (Fucus serratus male)
ATGGAGAACCTATTCGAGGAGGCCACGGTAAAAGCTGTAATCAAGAAAGC
CAACCCACAAAGCGCGGCAGGTCCGTCTGGACTACGCTACAGCCATCTGC
AGGCCGCGCTGTGCGATGAACTGGTCGAGGACCTCGCGGCGTTCGCGACG
CTTGTTTTTTCCAGCCGTGTTTTGCCCCAAGTATTCTGGACACTGCACAC
GAGTGCCAACCTTTCCGCGTTGGGGCAGAAGGCGAGACCAGTGGCGTGCG
GCGATGTCTTGCGGAGAGTTATTGGCGCTGTTTTCTGCAGCCGATACGGT
AGGAAACTGGCGGACTACTTCCAGCCCTGGGGCCAGTACGGCGTAGCGGT
TTCAAGCGGAGTAGAGATAATGGCCCTCACAGCGACACTGGGTTTCGAAG
AGGGTTGCATCATTCTCTCATACGACGGAGCAAACGCCTTTAACAGCATA
TACCGCCACAGGTTCCTGCCCGCGCTAGCCGAAATCGTTCCCTCAGTGGT
CCCCTACGCATCAAACCTGTACGCACGGGAACCCCCAAAACTTTTGTTTG
CACTAGACGGTGGAGGTTCCGAAGTGGTTGAGTCAGCTCGGGGAGTACAG
CAAGGATGTAATCTAGGTCCACTTTGCTACAGCGCAGGCTCACTGAAGAT
CCTAAAAGAATTCAGAGCCAATCCACCGGTGCCAGGAGCGAGAGCGGTTT
CGTTCATCGACGACATCACCGTCATTCTACCACCGGAAAGTTCTCTCGAT
ATTGCGGCTATAGGAAAAGTTACTGAATGGCTGCAGGAACGCCTGGGGAT
AGAAGGTATCTCGCTGAACCGAAGGAAATCGCAGGCCCTGCTAGCAGATG
GAGTGGGGCCAGAACAACTGACGGAAGAGCAGCGAGTTGCAATGGATACT
ACAGGGCTCACGGTGGTCCGACAGGGGATGAGGGTTGTGGGAGTACCAGT
CGGAACAGAACAGTTCCAGCGCGATTTCTTACAGGAGGCGGTTAATGGAG
AGCCAGCTGAGCTCGTGAGGGCGCTGGCCCCAATGGAGGATGCCCAAGCG
AGCTTTCAGATGTTGCGTCTATCTGCCACCTCTCGCCTCTCGCACCTGCT
CCGAACAGTCCCGCCCTCCATAACAGGCCAAGCTGCAGCAAGCTATGACG
CTTTGGTGGAGTGGGCGTTGGCGTCTATCATAGCCGGCATGGAGAACCTA
TTCGAGGAGGCCACGGTAAAAGCTGTAATCAAGAAAGCCAACCCACAAAG
CGCGGCAGGTCCGTCTGGACTACGCTACAGCCATCTGCAGGCCGCGCTGT
GCGATGAACTGGTCGAGGACCTCGCGGCGTTCGCGACGCTTGTTTTTTCC
AGCCGTGTTTTGCCCCAAGTATTCTGGACACTGCACACGAGTGCCAACCT
TTCCGCGTTGGGGCAGAAGGCGAGACCAGTGGCGTGCGGCGATGTCTTGC
GGAGAGTTATTGGCGCTGTTTTCTGCAGCCGATACGGTAGGAAACTGGCG
GACTACTTCCAGCCCTGGGGCCAGTACGGCGTAGCGGTTTCAAGCGGAGT
AGAGATAATGGCCCTCACAGCGACACTGGGTTTCGAAGAGGGTTGCATCA
TTCTCTCATACGACGGAGCAAACGCCTTTAACAGCATATACCGCCACAGG
TTCCTGCCCGCGCTAGCCGAAATCGTTCCCTCAGTGGTCCCCTACGCATC
AAACCTGTACGCACGGGAACCCCCAAAACTTTTGTTTGCACTAGACGGTG
GAGGTTCCGAAGTGGTTGAGTCAGCTCGGGGAGTACAGCAAGGATGTAAT
CTAGGTCCACTTTGCTACAGCGCAGGCTCACTGAAGATCCTAAAAGAATT
CAGAGCCAATCCACCGGTGCCAGGAGCGAGAGCGGTTTCGTTCATCGACG
ACATCACCGTCATTCTACCACCGGAAAGTTCTCTCGATATTGCGGCTATA
GGAAAAGTTACTGAATGGCTGCAGGAACGCCTGGGGATAGAAGGTATCTC
GCTGAACCGAAGGAAATCGCAGGCCCTGCTAGCAGATGGAGTGGGGCCAG
AACAACTGACGGAAGAGCAGCGAGTTGCAATGGATACTACAGGGCTCACG
GTGGTCCGACAGGGGATGAGGGTTGTGGGAGTACCAGTCGGAACAGAACA
GTTCCAGCGCGATTTCTTACAGGAGGCGGTTAATGGAGAGCCAGCTGAGC
TCGTGAGGGCGCTGGCCCCAATGGAGGATGCCCAAGCGAGCTTTCAGATG
TTGCGTCTATCTGCCACCTCTCGCCTCTCGCACCTGCTCCGAACAGTCCC
GCCCTCCATAACAGGCCAAGCTGCAGCAAGCTATGACGCTTTGGTGGAGT
GGGCGTTGGCGTCTATCATAGCCGGC
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