mRNA_F-serratus_M_contig90.20396.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig90.20396.1
Unique NamemRNA_F-serratus_M_contig90.20396.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
[Close]
BLAST of mRNA_F-serratus_M_contig90.20396.1 vs. uniprot
Match: D7FKH6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKH6_ECTSI)

HSP 1 Score: 454 bits (1168), Expect = 5.360e-152
Identity = 275/450 (61.11%), Postives = 319/450 (70.89%), Query Frame = 3 
Query:    6 MRRVACGFTRVLRGPSSSSLRVLKSRVVW-----HGASTLASP--HDFLSSLRRDRVKCNPAQTTGFLNRARHLASSSSP--------QPPSNSTEKESSAVSTLASNEGASKS-LTGPRITSKKGYLERENMIRETQKAVRQYYQEGMYQDALEVTHRLVDQVDDHFGRAHGVYASALSDMALMMKSMGQHKEATEVYLKALEVYREVYKGEENASFASTLHNLGMAFRAMAEESRKLEQIPLLERAAEAFDRCTQIREKILTNNHPDLQLARSRLAMVQSLLGS-EKEETEAKLRAALDGLQMAVGDGDASTANAMTNLALFLKGEEQYEEATKLFTTALETRKELYGPKHVDVLVSMHNLSMMHFAAGREDEAVELQEAIGRIGDELGVTEEEQVEAGG--GGSEGMAEDAAVTRKDTEHPEKQRQEINRKPEKGKGGEESDTAWRP 1298
            MRR A G    LR  S+S  R   + +V      +G S+   P  H   S          PA T     R    +SS  P          P    E ES+ V+TL S+EG+S S LTGPR+ SKKGYLERE MIRETQKAVR+YY+EGMYQDALEV  RLVDQVDDHFGRAHGVY SALSDMALM+KSMG+H+EATE YLKALEVYR VYKGEENASFASTLHNLGM FRAMAE+S+KLE+IPL+ERAAE+F+RC QIREKILTNNHPDLQLARSRLA VQ +LG  EKE TEA+LRAALDGLQMAVG+ DASTANA TNLALFLKGE +  EAT L+T  LETRK+LYG KH DVLVSMHNLSM H  AGREDEA++L++ I +IG+E+G+T EEQ EA G  GG+  +A++                E  + PEK K   +S + W+P
Sbjct:    1 MRRAATGVANCLRVVSASCSRTTPAVLVGRHGVEYGPSSAMWPSVHTGSSKNSATAAAAVPAATPSHGRRLSSKSSSGKPTEAADGAGSEPEKILEVESTPVNTLVSSEGSSPSMLTGPRVKSKKGYLEREGMIRETQKAVREYYKEGMYQDALEVAERLVDQVDDHFGRAHGVYGSALSDMALMLKSMGRHQEATETYLKALEVYRAVYKGEENASFASTLHNLGMLFRAMAEDSKKLEKIPLMERAAESFERCVQIREKILTNNHPDLQLARSRLATVQDMLGGGEKEGTEARLRAALDGLQMAVGNDDASTANAKTNLALFLKGEGKLAEATDLYTDVLETRKKLYGRKHFDVLVSMHNLSMTHHVAGREDEAIKLRDEIAKIGEEMGMTPEEQSEASGAAGGAVKLAQE----------------EGKKAPEKKKN--DSGSTWKP 432
[Close]
BLAST of mRNA_F-serratus_M_contig90.20396.1 vs. uniprot
Match: W4GGN5_9STRA (Uncharacterized protein n=5 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GGN5_9STRA)

HSP 1 Score: 135 bits (340), Expect = 1.020e-31
Identity = 90/264 (34.09%), Postives = 141/264 (53.41%), Query Frame = 3 
Query:  336 YLERENMIRETQKAVRQYYQEGMYQDALEVTHRLVDQVDDHFGRAHGVYASALSDMALMMKSMGQHKEATEVYLKALEVYREVYKGEENASFASTLHNLGMAFRAMAEESRKLEQIPLLERAAEAFDRCTQIREKILTNNHPDLQLARSRLAMVQSLLGSEKEETEAKLRAALDGLQMAVGDGDASTANAMTNLALFLKGEEQYEEATKLFTTALETRKELYGPKHVDVLVSMHNLSMMHFAAGREDEAVELQ-EAIGRIGDEL 1124
            Y+  E+ I   Q  +R+ Y +G +   LE+     D V DHFG  H VYAS L+++ALM K++    EA   Y  AL VY+    GE +AS+A+TLHNLG  +R  A     ++++  ++ A E F+   ++R  IL  +HPD+ ++   + M+      +K + E  L  A + L+  VG     TA A  NL +  K   +++ A +LF  A   RK   G  HV+ + +MHN +    A GRED+A  +Q E +  +GD++
Sbjct:   46 YMIVESDIAGMQHKIRELYSKGDFVSGLEMAEICRDTVRDHFGEDHPVYASTLNNLALMQKNLSLLDEAIGSYEAALRVYKSCV-GENHASWATTLHNLGGVYRLQAHNLSGMKKVEGIDHALECFEESLRVRRDILAPDHPDIAISMCNVGMLYWHT-HKKAKAEEILVEAAERLESKVGPTSPLTALAWNNLGIVYKELGKFDAAVELFAKATAVRKASLGDMHVETITTMHNWAEALRAGGREDDAAVIQKEILDLVGDDV 307
[Close]
BLAST of mRNA_F-serratus_M_contig90.20396.1 vs. uniprot
Match: A0A485LCH3_9STRA (Aste57867_19411 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LCH3_9STRA)

HSP 1 Score: 110 bits (276), Expect = 4.340e-23
Identity = 82/259 (31.66%), Postives = 128/259 (49.42%), Query Frame = 3 
Query:  348 ENMIRETQKAVRQYYQEGMYQDALEVTHRLVDQVDDHFGRAHGVYASALSDMALMMKSMGQHKEATEVYLKALEVYREVYKGEENASFASTLHNLGMAFRAMAEESRKLEQIPLLERAAEAFDRCTQIREKILTNNHPDLQLARSRLAMVQSLLGSEKEETEAKLRAALDGLQMAVGDGDASTANAMTNLALFLKGEEQYEEATKLFTTALETRKELYGPKHVDVLVSMHNLSMMHFAAGREDEAVELQEAIGR-IGDE 1121
            E+ I   Q+ +R++Y +G +   LE+     D V  HFG  H VYAS L++MALM K++   +E+   Y  AL VY+    GE +AS+A+TLHNLG   R  +     +++I  L+ A E F+   ++R  IL  +HPD+ ++   + ++      +K + E  L  A++ L+  VG     TA A                                    V+ + +MHNL+    AAGR+DEA ++QEAI   +GDE
Sbjct:   56 ESEIAGMQQKIREFYSKGDFVSGLEIAEICRDTVKVHFGEEHPVYASTLNNMALMQKNLSLLEESIATYEHALRVYKACV-GENHASWATTLHNLGGVHRLHSHALTGMKKIESLDLALECFEESLRVRRDILAADHPDIAISMCNVGILYWHT-HKKAKAEDMLVDAVERLEAKVGPSSPLTALAYNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVETITTMHNLAETLRAAGRDDEATKIQEAILELVGDE 312
[Close]
BLAST of mRNA_F-serratus_M_contig90.20396.1 vs. uniprot
Match: A0A397DE51_9STRA (EF-hand domain-containing protein (Fragment) n=5 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397DE51_9STRA)

HSP 1 Score: 111 bits (277), Expect = 1.090e-21
Identity = 76/226 (33.63%), Postives = 116/226 (51.33%), Query Frame = 3 
Query:  336 YLERENMIRETQKAVRQYYQEGMYQDALEVTHRLVDQVDDHFGRAHGVYASALSDMALMMKSMGQHKEATEVYLKALEVYREVYKGEENASFASTLHNLGMAFRAMAEESRKLEQIPLLERAAEAFDRCTQIREKILTNNHPDLQLARSRLAMVQSLLGSEKEETEAKLRAALDGLQMAVGDGDASTANAMTNLALFLKGEEQYEEATKLFTTALETRKELYGPKH 1013
            Y+  E+ I   Q  +R+ Y  G +   LE+     D V DHFG  H VYAS L+++ALM K++    EA   Y  AL VY+    GE +AS+A+TLHNLG  +R  A     ++++  ++ A E F+   ++R  IL  +HPD+ ++   + M+      +K + E  L  A + L+  VG     TA A  NL +  K   +++ A +LF  A   RK   G  H
Sbjct:   43 YMIVESDIAGMQHKIRELYSYGDFVSGLEMAEICRDTVRDHFGEDHPVYASTLNNLALMQKNLSLLDEAIGSYEAALRVYKSCV-GENHASWATTLHNLGGVYRLQAHNLSGMKKVEGIDHALECFEESLRVRRDILAPDHPDIAISMCNVGMLYWHT-HKKAKAEEILVEAAERLESKVGPTSPLTALAWNNLGIVYKELGKFDAAVELFAKATAVRKASLGDMH 266
[Close]
BLAST of mRNA_F-serratus_M_contig90.20396.1 vs. uniprot
Match: A0A024UG34_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UG34_9STRA)

HSP 1 Score: 106 bits (265), Expect = 1.110e-21
Identity = 81/266 (30.45%), Postives = 126/266 (47.37%), Query Frame = 3 
Query:  318 ITSKKG----YLERENMIRETQKAVRQYYQEGMYQDALEVTHRLVDQVDDHFGRAHGVYASALSDMALMMKSMGQHKEATEVYLKALEVYREVYKGEENASFASTLHNLGMAFRAMAEESRKLEQIPLLERAAEAFDRCTQIREKILTNNHPDLQLARSRLAMVQSLLGSEKEETEAKLRAALDGLQMAVGDGDASTANAMTNLALFLKGEEQYEEATKLFTTALETRKELYGPKHVDVLVSMHNLSMMHFAAGREDEAVELQEAI 1103
            +TS +G    Y+  E  I   QK +R+ Y +G +   LE+     D V DHFG  H VYAS L+++ALM K++ Q  EA E Y  AL VY+    GE +AS+A+TLHNLG  +R  A     ++++  L+ A E F+   ++R +IL  +HPD+ ++   + M+      +KE+ E  L  A++ L+  VG                                                  +MHN +    A+GR+D+A E+Q+ I
Sbjct:   35 VTSTQGRRNDYMVVEADIAGMQKKIRELYSKGDFVSGLEMAEICRDAVRDHFGDDHPVYASTLNNLALMQKNLSQLDEAIESYEAALRVYKSCV-GENHASWATTLHNLGGVYRLQAHSLSGMKKVEGLDHALECFEESLRVRREILAADHPDIAMSMCNVGMLYWHT-HKKEKAEEMLVEAVERLEAKVGATSPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTMHNWAEALRASGRDDDAAEIQKTI 298
[Close]
BLAST of mRNA_F-serratus_M_contig90.20396.1 vs. uniprot
Match: A0A1V9Z3R8_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Z3R8_9STRA)

HSP 1 Score: 107 bits (268), Expect = 5.660e-21
Identity = 69/199 (34.67%), Postives = 119/199 (59.80%), Query Frame = 3 
Query:  291 ASKSLTGPRITSKKG---YLERENMIRETQKAVRQYYQEGMYQDALEVTHRLVDQVDDHFGRAHGVYASALSDMALMMKSMGQHKEATEVYLKALEVYREVYKGEENASFASTLHNLGMAFRAMAEESRKLEQIPLLERAAEAFDRCTQIREKILTNNHPDLQLARSRLAMVQSLLGSEKEETEAKLRAALDGLQMAVG 878
            A +SL  P +TS  G   ++E EN I   Q+ +R++Y +G ++ AL++     D V +HFG  H VYAS L+++ALM K++ +  EA E Y +AL VY+E   GE +ASFA+T+HNLG  +R  +     ++++  ++ A E F    +IR++ L  +HPD+ ++ + + M+      +K++ E  +  A++ LQ  +G
Sbjct:  254 AMRSLHVP-VTSTPGRSHFVEVENDIAGMQQKIREFYTQGDFESALDIAEICRDNVKEHFGTEHPVYASTLNNIALMQKNLSKLTEAIETYEEALRVYKECV-GENHASFATTMHNLGGVYRLQSHSLSGMKKVEAMDYALEYFQESLRIRQENLAPDHPDVAVSMTNVGMLHWHT-HKKDKGEDMVVEAMERLQKKLG 449
[Close]
BLAST of mRNA_F-serratus_M_contig90.20396.1 vs. uniprot
Match: A0A2D4CBT8_PYTIN (rRNA adenine N(6)-methyltransferase n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CBT8_PYTIN)

HSP 1 Score: 92.0 bits (227), Expect = 8.500e-16
Identity = 63/188 (33.51%), Postives = 97/188 (51.60%), Query Frame = 3 
Query:  336 YLERENMIRETQKAVRQYYQEGMYQDALEVTHRLVDQVDDHFGRAHGVYASALSDMALMMKSMGQHKEATEVYLKALEVYREVYKGEENASFASTLHNLGMAFRAMAEESRKLEQIPLLERAAEAFDRCTQIREKILTNNHPDLQLARSRLAMVQSLLGSEKEETEAKLRAALDGLQMAVGDGDASTA 899
            Y++ E  I   Q+ +R  Y +G +QDALEV  +  D V  HFG +H VYAS ++++ALM K+MGQ +EA E Y  AL VY+                      +A+A   + +E++  L RA + F+   +IR+ +L   HPD+ L+   L ++      + E+  A L+ AL  L+  VG     TA
Sbjct:   65 YVQVEQDIAAMQREIRDAYSKGSFQDALEVGLQCRDLVKSHFGESHPVYASTITNIALMYKNMGQVEEAIESYEFALRVYKXXXXXXXXXXXXXXXXXXXXX-QALAHGVKGMERVQALHRAQDCFEESLKIRKLLLEPGHPDIALSMCNLGIIH-WHNKQAEKAVATLKDALQALEARVGKDSTLTA 250
[Close]
BLAST of mRNA_F-serratus_M_contig90.20396.1 vs. uniprot
Match: A0A0P1AF21_PLAHL (Kinesin light chain n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AF21_PLAHL)

HSP 1 Score: 85.9 bits (211), Expect = 1.390e-14
Identity = 63/195 (32.31%), Postives = 94/195 (48.21%), Query Frame = 3 
Query:  336 YLERENMIRETQKAVRQYYQEGMYQDALEVTHRLVDQVDDHFGRAHGVYASALSDMALMMKSMGQHKEATEVYLKALEVYREVYKGEENASFASTLHNLGMAFRAMAEESRKLEQIPLLERAAEAFDRCTQIREKILTNNHPDLQLARSRLAMVQSLLGSEKEETEAKLRAALDGLQMAVGDGDASTANAMTNLA 920
            Y++ E  I   Q+ +R  Y  G YQ ALEV  +  D V  HFG  H VYAS ++++ALM K++GQ +EA E Y  AL+ Y+                            +  +E++  L RA E F+   +IR +IL   H D+ L+ S + ++      + ++  A L  A+D L+  VG     TA A  NLA
Sbjct:   58 YVQVEQNIASMQREIRDAYNSGDYQAALEVGFQCRDLVKSHFGENHPVYASTITNIALMYKNLGQTEEAIESYEFALQTYKXXXXXXXXXXXXXXXXXXXXXXXXSI-STAGMERVTALHRALECFEESLKIRREILEPGHADIALSMSNIGVIY-WQNKQPDKAFAALIEAVDLLEKKVGANSVLTALAKNNLA 250
[Close]
BLAST of mRNA_F-serratus_M_contig90.20396.1 vs. uniprot
Match: A0A3M6VAZ1_9STRA (Uncharacterized protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VAZ1_9STRA)

HSP 1 Score: 84.0 bits (206), Expect = 6.260e-14
Identity = 63/198 (31.82%), Postives = 96/198 (48.48%), Query Frame = 3 
Query:  327 KKGYLERENMIRETQKAVRQYYQEGMYQDALEVTHRLVDQVDDHFGRAHGVYASALSDMALMMKSMGQHKEATEVYLKALEVYREVYKGEENASFASTLHNLGMAFRAMAEESRKLEQIPLLERAAEAFDRCTQIREKILTNNHPDLQLARSRLAMVQSLLGSEKEETEAKLRAALDGLQMAVGDGDASTANAMTNLA 920
            K  Y++ E  I   Q+ +R  Y  G Y+ AL+   +  D V  HFG  H VYAS ++++ALM K++GQ +EA E Y  AL+                         RA A     +E++  L RA E F+   +IR+ IL   HPD+ L+ S + ++      + E+  A L  A++ L+  +G   + TA A  NLA
Sbjct:   56 KTNYVQMEQDIAVMQREIRDAYNSGDYKSALDAGLQCRDLVKGHFGENHPVYASTVTNIALMYKNLGQMEEAIEAYEFALQTXXXXXXXXXXXXXXXXXXXXXXX-RAQAISIAGMERVNALHRALECFEESLKIRQSILDPGHPDIGLSMSNVGVIH-WQNKQPEKAFAALTEAVELLEKKLGPKSSLTALAKNNLA 251
[Close]
BLAST of mRNA_F-serratus_M_contig90.20396.1 vs. uniprot
Match: A0A3R6YC42_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A3R6YC42_9STRA)

HSP 1 Score: 84.3 bits (207), Expect = 8.790e-14
Identity = 70/244 (28.69%), Postives = 105/244 (43.03%), Query Frame = 3 
Query:  372 KAVRQYYQEGMYQDALEVTHRLVDQVDDHFGRAHGVYASALSDMALMMKSMGQHKEATEVYLKALEVYREVYKGEENASFASTLHNLGMAFRAMAEESRKLEQIPLLERAAEAFDRCTQIREKILTNNHPDLQLARSRLAMVQSLLGSEKEETEAKLRAALDGLQMAVGDGDASTANAMTNLALFLKGEEQYEEATKLFTTALETRKELYGPKHVDVLVSMHNLSMMHFAAGREDEAVELQEAI 1103
            K +R+ Y +G +   LE+     D V DHFG  H VYAS L+++ALM K++ Q  EA E Y  AL VY+    GE +AS+A+TLHNLG  +R  A     ++                    KIL  +HPD+ ++   + M+      +KE+ E  L  A++ L+  VG                                                  +MHN +    A+GR+D+A E+Q+ I
Sbjct:  149 KKIRELYSKGDFVSGLEMAEICRDAVRDHFGDDHPVYASTLNNLALMQKNLSQLDEAIESYEAALRVYKSCV-GENHASWATTLHNLGGVYRLQAHSLSGMK--------------------KILAADHPDIAMSMCNVGMLYWHT-HKKEKAEEMLVEAVERLEAKVGATSPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTMHNWAEALRASGRDDDAAEIQKTI 370
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig90.20396.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FKH6_ECTSI5.360e-15261.11Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
W4GGN5_9STRA1.020e-3134.09Uncharacterized protein n=5 Tax=Aphanomyces astaci... [more]
A0A485LCH3_9STRA4.340e-2331.66Aste57867_19411 protein n=1 Tax=Aphanomyces stella... [more]
A0A397DE51_9STRA1.090e-2133.63EF-hand domain-containing protein (Fragment) n=5 T... [more]
A0A024UG34_9STRA1.110e-2130.45Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]
A0A1V9Z3R8_9STRA5.660e-2134.67Uncharacterized protein n=1 Tax=Thraustotheca clav... [more]
A0A2D4CBT8_PYTIN8.500e-1633.51rRNA adenine N(6)-methyltransferase n=1 Tax=Pythiu... [more]
A0A0P1AF21_PLAHL1.390e-1432.31Kinesin light chain n=1 Tax=Plasmopara halstedii T... [more]
A0A3M6VAZ1_9STRA6.260e-1431.82Uncharacterized protein n=2 Tax=Peronospora effusa... [more]
A0A3R6YC42_9STRA8.790e-1428.69Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig90contigF-serratus_M_contig90:359764..372137 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score463.4
Seed ortholog evalue1.2e-127
Seed eggNOG ortholog2880.D7FKH6
Hectar predicted targeting categorymitochondrion
EggNOG free text desc.determination of stomach left/right asymmetry
EggNOG OGsCOG0457@1,KOG1840@2759
Ec32 ortholog descriptionTetratricopeptide-like helical domain
Ec32 orthologEc-12_002030.1
COG Functional cat.C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons5
Model size1846
Cds size1308
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932623.7732556-UTR-F-serratus_M_contig90:359763..3602961622932623.7732556-UTR-F-serratus_M_contig90:359763..360296Fucus serratus maleUTRF-serratus_M_contig90 359764..360296 -
1690964391.1891313-UTR-F-serratus_M_contig90:359763..3602961690964391.1891313-UTR-F-serratus_M_contig90:359763..360296Fucus serratus maleUTRF-serratus_M_contig90 359764..360296 -
1622932623.862337-UTR-F-serratus_M_contig90:372132..3721371622932623.862337-UTR-F-serratus_M_contig90:372132..372137Fucus serratus maleUTRF-serratus_M_contig90 372133..372137 -
1690964391.2782576-UTR-F-serratus_M_contig90:372132..3721371690964391.2782576-UTR-F-serratus_M_contig90:372132..372137Fucus serratus maleUTRF-serratus_M_contig90 372133..372137 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932623.7858646-CDS-F-serratus_M_contig90:360296..3606211622932623.7858646-CDS-F-serratus_M_contig90:360296..360621Fucus serratus maleCDSF-serratus_M_contig90 360297..360621 -
1690964391.2011664-CDS-F-serratus_M_contig90:360296..3606211690964391.2011664-CDS-F-serratus_M_contig90:360296..360621Fucus serratus maleCDSF-serratus_M_contig90 360297..360621 -
1622932623.8010428-CDS-F-serratus_M_contig90:360955..3612031622932623.8010428-CDS-F-serratus_M_contig90:360955..361203Fucus serratus maleCDSF-serratus_M_contig90 360956..361203 -
1690964391.2121108-CDS-F-serratus_M_contig90:360955..3612031690964391.2121108-CDS-F-serratus_M_contig90:360955..361203Fucus serratus maleCDSF-serratus_M_contig90 360956..361203 -
1622932623.813042-CDS-F-serratus_M_contig90:361758..3619291622932623.813042-CDS-F-serratus_M_contig90:361758..361929Fucus serratus maleCDSF-serratus_M_contig90 361759..361929 -
1690964391.2320313-CDS-F-serratus_M_contig90:361758..3619291690964391.2320313-CDS-F-serratus_M_contig90:361758..361929Fucus serratus maleCDSF-serratus_M_contig90 361759..361929 -
1622932623.8252861-CDS-F-serratus_M_contig90:362696..3628551622932623.8252861-CDS-F-serratus_M_contig90:362696..362855Fucus serratus maleCDSF-serratus_M_contig90 362697..362855 -
1690964391.2477703-CDS-F-serratus_M_contig90:362696..3628551690964391.2477703-CDS-F-serratus_M_contig90:362696..362855Fucus serratus maleCDSF-serratus_M_contig90 362697..362855 -
1622932623.841611-CDS-F-serratus_M_contig90:371727..3721321622932623.841611-CDS-F-serratus_M_contig90:371727..372132Fucus serratus maleCDSF-serratus_M_contig90 371728..372132 -
1690964391.268543-CDS-F-serratus_M_contig90:371727..3721321690964391.268543-CDS-F-serratus_M_contig90:371727..372132Fucus serratus maleCDSF-serratus_M_contig90 371728..372132 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig90.20396.1prot_F-serratus_M_contig90.20396.1Fucus serratus malepolypeptideF-serratus_M_contig90 360297..372132 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig90.20396.1

>prot_F-serratus_M_contig90.20396.1 ID=prot_F-serratus_M_contig90.20396.1|Name=mRNA_F-serratus_M_contig90.20396.1|organism=Fucus serratus male|type=polypeptide|length=436bp
MRRVACGFTRVLRGPSSSSLRVLKSRVVWHGASTLASPHDFLSSLRRDRV
KCNPAQTTGFLNRARHLASSSSPQPPSNSTEKESSAVSTLASNEGASKSL
TGPRITSKKGYLERENMIRETQKAVRQYYQEGMYQDALEVTHRLVDQVDD
HFGRAHGVYASALSDMALMMKSMGQHKEATEVYLKALEVYREVYKGEENA
SFASTLHNLGMAFRAMAEESRKLEQIPLLERAAEAFDRCTQIREKILTNN
HPDLQLARSRLAMVQSLLGSEKEETEAKLRAALDGLQMAVGDGDASTANA
MTNLALFLKGEEQYEEATKLFTTALETRKELYGPKHVDVLVSMHNLSMMH
FAAGREDEAVELQEAIGRIGDELGVTEEEQVEAGGGGSEGMAEDAAVTRK
DTEHPEKQRQEINRKPEKGKGGEESDTAWRPGKNN*
back to top

mRNA from alignment at F-serratus_M_contig90:359764..372137-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig90.20396.1 ID=mRNA_F-serratus_M_contig90.20396.1|Name=mRNA_F-serratus_M_contig90.20396.1|organism=Fucus serratus male|type=mRNA|length=12374bp|location=Sequence derived from alignment at F-serratus_M_contig90:359764..372137- (Fucus serratus male)
CGACGATGAGAAGAGTCGCGTGTGGTTTCACAAGAGTGTTGCGGGGACCA
TCCTCTTCAAGCTTGAGGGTGTTAAAATCCAGAGTGGTTTGGCATGGTGC
GAGTACTTTGGCGTCCCCCCATGATTTTCTTTCATCATTACGAAGGGATC
GTGTCAAGTGCAACCCTGCACAAACCACCGGCTTCTTGAACAGGGCGAGG
CACTTGGCATCGAGTTCGTCCCCGCAGCCTCCATCCAACTCCACCGAAAA
AGAATCGTCTGCAGTATCTACTTTAGCGTCCAACGAAGGGGCGTCAAAGT
CGTTGACGGGGCCTAGGATCACCTCCAAGAAGGGTTATCTCGAGCGAGAA
AATATGATCCGGGAGACCCAGAAGGCTGTTCGACAGTACTATCAAGAGGG
CATGTACCAGGTGTGACTAAGCGACTTTCGCGAGCGCCTCGGAGTGCTGA
CGTGGAACACTGCTTGGCGCATCTGACATCTGACATGAGCATGGAAATAT
TGCATCGAAAGGCATCATGCTGTATGCTGTACGAAGTGTCCTCGTGTAGG
CACATGAGAAGCCCACAGTATGATACATTGCTGCCGTACAAGGTATCTCG
AGTTTTCCCCGATGAGAAGCACTACAGACAGCAGTACGTACTGAATAAAG
TCTACAAATATACTCCCACTCCAGTATCTACTTTCAGTACAAACGTAACT
GCATGTACATGTATGGTCACACATATAGCAAGAGTATGGATCAACCTGTT
AAGGTTGCCAATCCTGCTCGTGGTCAGCTAAACAGAGAAAATAATATTCC
CCTGTCCGCGTTCGCGCCTGGGAATTTGGTCTCGCGAGACGGTTTCGGCA
GTCCCGTCCCGCGTCAGCCTGCTCATCTCCATACTCAGGCTGAATCTGGT
GCTTACTTACGGGATTCCTCCCGAGTTCCGCGGCGGCGTCCATATATTAA
TATTAAACCGCCATACGCCATCGGGTCAGTCCCGAGTAAATCGGGTCACG
CAATTGCGTACCGATGGCGTTCACTGCCGAGAATCCGCCGGCACAGGGCC
AGCATACCTCAAGGTAGTTTCGAACGAGTGCTGCCTTCGCAGGTCACTAT
GGACCAATTAATATACGCCTTTCTTTCCCACACCCACTATTGGTTATGAA
GTGGGCATGTTGAAAGTAACGGCGAATGTACATGTACCTGAGTGACTATC
ATAAGCGACTTTCTCGAGCGCCTCGAAGTGCTGACGTGGAATACTGCTTG
ACGCATCTGACATAAGCAGGAAAATCTTGCATCGAGGGGCATCATGTCGC
ATGCTGTACGAAATGTCCTCATGAAGACACTTGAGAAGTCCACAGTATAA
TACATTGCTGCAGTAGAAGGTATCTCGAGTTTATAGTACCTTAGACAGTA
TGTACTATTAATATCAATACCAGGTATACAAATAAATCTACTTTCGGTAC
AAACGTAACTGCCTCTTGCCTCTTGCCACTCCTGTACAGAAGACTCTGAT
CGCACTGTTCTGTTGGTCCGGTAATTTATTCTGTAATGGATGTACTCCGG
GTTGGTGTTTGTACTGTGCCGGAACCTGTTGAGGTATTACGTTCCTAATA
ATATACTTTGCTTGAAATATTTTGAACCCATCCAAACCTTAACCTTCCAA
GCACCCACACAGTCCGAGGGAATCGAGTCGAAGTGTTTGGTTGGGAACCT
CTGCTGTTAAAAAAAATCTCTACATCAGTTGTACCAGTATTAATAGTCGG
GTTCCCCGATGATAGTCGCAGTTGACGGTACAAATGGACAACTTCGCGGA
AAGCGGGAGGAAGGCGGGGTGCACGTGAGTAATTAGATTTAGCCTAATAT
AGGTGTGGCCTCGCGAGACCAAATTCTCAGGTGCGAACGAGTATAGGGAA
AATTCCACTCTGTTTGGCTGACTACGAATACGAGAAAGACTAGCAATTGA
TGCCCTGACAGGGCCGCATTACGCGGGTATTTTTTGTTTGTATTTCACTT
CCGGTCGATGGTCCTCGAGGTGCTAGATTACCAATCCCACCTACTGGCCT
CCTCCGATACTTTCTGTATAACACTCGTTACGCCCCGACCGAGGCTGGTT
GTGCCCGGGGAAACCACCGACACAACAGTTATGTAGAGGATAGGGACGCC
GCCTGTGGCCTAGGCTGCAGACTGCGTTGGCGGTGATGGACTTTAAGCTA
AGCCCCGATGCTGTGGAGTTTTTCCCAGTCTCGGGGCACCGCCGCTGAAA
GCGAGCAGTTTGGAGATAGTCGAGCGTGAGTTAGCAACAGATTCGGCACG
CTGGAAGTGGTGAGAGATGCGGCCGACGCAGAGTGGGACTGCTGAACTCC
TTCGGTGGCGAGATACACACGTAGGGCATGTGCCTAGATGGATGGGCTAA
CCATAAAATCAGTAACAAAAAGAGAAAACTATTAATAGCTAGAAAAGGCA
GGACACGGGCGCGACCAGAGAGCCGGCGTAAGCGAAAGATAACACATATG
ACTAGAGCGCGGTCCCGCACCGGGGAGCTCAATGTAGCGACCTGGAATGT
TCGTTCATTGTTCCTTACGGGACGCCGTAGGGTCGGTCATGCGGAGGTGC
TTTTGCAGAAATGTAAAGTACTCGGCTGTGACGTCATAGGGCTACAGGAG
AGGCGAAGGCCGGGGCGGACTGAAATCACCGCGGCAGTCTACCGCGTTTT
CTGTAGCGAGGAAGACGGGAGCAGTGGTCGGGCTGGACAGCATGGGGTGG
GACTAGTGTTCAAGGAGTCTATCGTCCGCGAAGCTACTTGAACACAGGAG
CTTACGAACGAGCGCCTGATGTCGATGACTTTCAACTTGGCAGGCAAGTC
CAACGCTATCACTTTTGTTGTGGCATATAGTCTGACAGATACTGTGTCCA
ATACGCGGGAACAGAAGAAAGCGTTTTGGGCGGCTTTGAATAGTGCTGCT
AGTCGAGTGCCCAGCAGTATGTGTTTATTTTTATAGATGCTAACGCTAGA
ACTGGTGTACGACTAGGAGAGGAGGATTGCAAAGTAATTAAGGCCTATGG
GAGGGACACCCGGGTCAGTGACAGCAAAAAAACTCGCTTTTGCGGTTTGA
GAGGGACAACAAGCTTGCCCTCGTCAACACGTTCTTCTCCGTCCCCAAGG
GATGCACGTCTCGTACATTCAACGGTACCCGGGCCGTGGATAGGAAGCAT
CTTGACTACACATCATTACGCGACAACCACACCGCAAGCTTGTCCGAAAC
GTCACAGTTCACTTGCAGCTGCGTACGGATTCTACCACAATATCGTGTGC
GCCACAGTCCGACTCCCCGGCAGATTTGCTCGAAATCGAAAACAGCGAGC
CCTCACAGGGCGCAAGAGCATTGACAGACTAGCAATCACGTCTGACGCTG
ACCGACGCGAACGGCTGATACGCCTTGTAGCCAATCAGCTCACCCAGGCC
GAACTCGGGGGCATAGTCGGCAAAAAAGCGGTCCTTTTCACCGACACACT
CCTGCGGTCCGCAGAAGCGATGCTAGGCCAAATCCGAAATTCCCTTTTCT
ATGGGTTGTTCCAAGATGAGGTAATGCACGCCGAATTTCAAGAAGCCTGG
ACGGAGAGGGAAGAGGCTCGGACAGCGGTGCGCGACGCCTTTGCCGGCGG
CTCTGCTTTTCGCGCGTTGCGGAAGGCATGCAGAAAACTCAGGGAAGTCA
TGCAGGCCGCAGAGGCTAGGTACCTGGAGGTGTACGCCTGTGAAGTCGCG
GAATTCACCAAAGCTGGAGACATGAAAGGCTGGTACGAATATCTCAAAGG
CGGGTGAAAATTGCAGGGTAAGAAGGTGGGAAGCGCTTAATACATTAGGG
ACGAGGACGGAAAGCTCCTACGGAAGCTTGGAGAGATCCGTGCGAGATGG
AGACGATATTTCGCTTCCTTGCTGAACACGACCTCGGCCGCTCTCGATCG
AACAATTATCAAGGGTCTATCGCCAAAGCCGGTAGCCCTGTCACTCGGAG
ACCCACCGGTTGTGAATGAGACGTAAAATGCGCTGAGATCTATGGCCAAT
GGCAAGGCTATGGGACCGGATGAGCTGCAGGTGAAACTTCTCAGGCTTGG
GCTTTTCGACAGTTCCCACGAAATCTTGCTTGCATTCCACGGCATCATCG
TGGCTGTGTGGGTAACGGGGAAAGTGCCACAGGAATGGAAAGACGCCACC
ATCAAAATTCTACACAAGAAGGATCGGACCTAGGGTGGCAACTGCAGGAG
CCTCTCTCTGGTGGCTCATGCTGGCAAGGTTCACCTTAAAATCGTGGCCA
ATTGACTTGGCGACTTTTGCGAGGAAATTGGGATTCTTCCCGAGGGACAG
AGCGGCTCCCGACCATAACGCTCGAGAACCGATGCGATGCTCTTCTTGCG
CAGACTGCAAGGACTGGGACGGACAAGCGACACTTATGTAAGTATTTACT
TCATCGATCTGGCAAAAGTGTACGACTCTGTCGATCGTGTGCTACTATGG
GAAGTTCTTACCTATTTTGGAGTCCCGTCTTGGATGATCAAGGTCATCCG
CATGTTTCACAATGGTATGCGGGCTCGCGTACGGCTGGATGATAAGAGAC
TTCTAGGCGCGGTCCAATGTTTACCAGGGCCTCCGGCAAGAATGTGTGCT
GTCGCCGCCATTTTTCAATATTATATTTGGGGTGGTGATCATATTGGTTC
TGCAGCGGTTCGCGGAGGACCCGCTGATCGTCTCGGACTTGGTGTACCTT
GATGATGCGCCCAAAGGGTGAGGATGGCAGGCTCAGGGAGGAGGAGACGT
TGGAAATGGTTCGACGGACGGTGTGGGGGATGCTGTCTGCAGACGATACT
GGGGTGGTGTCGACAATGCCGCGTGGGCTTACCAGGATGATGGACGTTAT
AGTGGTCGCATATCCGGAATTTGGATTGACATTGTCAGAGGAAACCAAGG
CCATGCACCTGTGACCTGATCCCAGCACAGCGTCGAACGTGCTGTGAATT
AAGGCGATAGGGTAACGGTATAAACAGACAACTGAGCTTGTGTACCTTGG
TGGTGCTATCAGGGAGAGCGCGGACCTCGACACCGAAATTCAGCGTCGCA
TCGGCTGGGCGAGTGTCAGAATTTACAGTTCCCAATTGCACGACCGACGG
AACGCCCGGTTGTCGCTCAAGATTGGACTATTCAAAGCGGAGGTTGTGGA
GGCTATGCTGTTCGGACGTACCACGTGGACTATGCGCTCTCAGGACTTGA
GCAGCCTGCGTACCGCCCACCACGAGCTACTTTTGCGCGTCATTTCGGCT
TTGGGCGCAAGGACCGCACCAGATATGAACCCCTATCGTAGGGGGAGGTT
ATCGAGAGGACCGGTTCTGAAGGCATCGAAACGATAAATCGTAAGCGCCA
ACTTAGGTTCGCCGGGAGCCTTATTCGGCAGGGCGACTCAAGGCTCTCAA
AGCGAGTCATGTTTGGGCGGCTGGCGATTCAAAGGCCCAATCGAGGAGGT
CCACCGGCACCGTCTTGGGTGGACTGCCTCCAGGAAAACCTCGAGGCCTT
TGGGGCGATCCCTCGCAAAGGCAAAGGACGGAAGTGGGTTGCATTCGGAG
TTGTTGTCAAGGATGGACGGGATTGGATGACTGCTGCGAAGAACGTGGGC
ATGTGGCACCGGGGGGTCGAGAGAGGAGCGGAAGCACTCGATAACGCCTG
GCGATGCGCGGACCTTCGCCAATCCAACGTGCGGCGCCAGCGCGAGGCTA
GTGGACTTTTACAGTAGTTACGTGTGTGATTTTGTTTTGTTTTGCCTTGT
TGTTGTTGTTTGTTTTTGTTTTCATCCTGCGAGATACCATAGGTGAGTCC
GGTATGGGGCCTGCTCCTGTTTTTATTTTTGGGCAGCTAACCCTAACCCC
TCACCAACCTAACCCCTCCCTAACCCCTAACCCCTCACTCACTCACGATG
GTTCTCCCTGTAGTCTGTATACCTCATTATTTAGTTTGGTATGATTGCTG
CCCCCCTTTCCCTCCTTTGCTGTGTGGCGCATTCGTTGTCCTTGTCTTTC
TGTCTGAGTTGTCTTGCGCTGCTTATATAGTTTGTCTTTCTTGAGCCTGC
TGAGGAGCATGTTTTTGTTGTCCTACGCGTATTATATGTGGTTGTCCTTC
GTGTCTTCTGCTTTTGATTGTCTTTATTTCTCTGTTTTCTCTGCTGAGTC
CCTTCCTGGCGACGATGTCCTTTGCCAGACACTTTCACGTCCGCTTCCTT
CTGTCTGATTTCCCGGTTTATTTGTTTTTTCTCCGACCGTATTCGTTCCC
GGTTTGTATTGGTTTGGCCCCGTCCATCTTGTGACCACATCTGGATGCGT
AGCGGATCGGTTCATGTGAGATAAATAACAGAACAAGGTGTGCGAATCTG
TTTTGTTTTGCTTTTGTGGTATTGTTTTATTTTGCTTCTTCCTGCGATAT
TGGTGAGTCCGGTATATAGTATATGGGTCCTGCTCCTCTTTTAGTTTTGG
TCAGTTAACCGCTCGTAATGCTTCACCTTGTGTCTGTACCTATACTGTAT
ACCTAATTATTTTATTTCATTTGTGATCGTTGTCCCTCTTTCGTCTTTCT
GTGTTTTTCTTCCGCCGCTGTGTGTGGCGTTCGTTGTCTTTGCCCTTGCC
TTCCTGCCTGGGTTATAGTCCGCATATACTTCGCTGCGTGTAGGACTTGC
CCTTCTTGCGTGCTTAGCCTACTCCTACTGACGAGGATGTTTTTTTGCCA
TACGCGTTTTACCATGTATATGTGGTCATATTTTGTTTGTTTCTTCTGTT
GTTTCTTCTGTTGTTTCTGCCGTTCGTGTTTGTGTTTGTGTTTTTTGTCT
ATTCTGTGCCCCTTCCTGGCGACGATGTCCTTTGCTGGCTACTTTCTTGT
TTGTTTCCTTCTGTCTGCTTTCCCCCCTTTTTTTTTCTCCGAACGTTTTC
CCGGTTTGATTTGATTTTGTTTGGTTCCGTCTATCTTGCAACCACGACTG
GATTCGTAGCGGATTGGTTAATTTTAAACAAACAACAACCATAACAACAT
GTCCACTACACCCAATAGTGGCTATGGGGAAAAGAGAAGCGCACAGTAGT
TGGTCCATGGTGATAACCTTGAAAAGTAGCACTCGCCACTGGAACTACCT
TAATGGCTGCTAGTATTGTGCCGGCGGCAGTGAACGCCACCGGTTCGCAA
GTGCGTGACTTGATAAACTCGGGACTGACCCAATGGCGATTGGGGGTATA
GATAAATGGACGCGGCCGCGGAAGGCGGGAGGAATCCGCGAGTACGCACC
CGATTCATCCTGAGTATGGAGAATGGGCAGGCTGACAGGGGACGGGACGG
CCGAACGCGTCTCGCGAGACCAAATTCTAAGGCGCGAAGGGAGACAGGGA
AATTTTCATTTTCTCTGTTCAGCTGGCCACGAGCAGGATTGGCAACCTTA
CATGATTGATACAAACTCTGCAGCAAGTGATGTCCAATTCGATAAGTACA
CCCACAAGTATCGATACAGTAGAAGATGATGCTATGATGACTCAGACCAG
CAAAACGGCAACCATGGATGACAACATGGATGACAGAGGGCAGCGCAGGG
CGTTGCAGGGTTATCGATGTCGATGCCTAGAATGGCAGAATTGAGAGTGC
ACCTACCTAGACGCGTCTTATCCGAGTTTATGGTTTACTTGAGATCTATC
GTTGATCTCCTATCGGGGGAGCAAATGCGATTACAGTACTTTAGCCTACT
GCAGACTAATAGCATTACAGCGCCGTATTGCGCGGTTATGTTCAATGTAA
CAAATACACAGACGTACACTCAGATATGCCAGGAAGGGAGGAGCAAGAAC
ATTGATTAGGGGAGAGTGGGTATGATTAGCGAGAACCCGGCAAATCGTTG
TAGAGGCAAGGACTAAAGACATAATACGGAAAGGAGAGAGGGAGTCGGGT
GACAGGAACAGAAAGCGACGAAGAAACAATATCGATACAGTATACGCCGG
CTCGGACGGGCAAAATGACAAAATGACAACCATGAAGCGGAGAGGGGAGG
GCAGGGCGTTGGGAGGTTAAATGTTATATGTTATAGAGGGGCATTACGCA
AAGAGAGTGAATCTGTTTTGGCGTGTCTCATCGGAGGTTTTCGTGAGAAC
AGTTATTGACCCACCCTTGGAGAGAGCAAATCGTGAATTTTGGACAGATT
AGCACGACAGGAACGGATTGCGCGGTGATATACAATTTCGTAAGTGCATT
GTCGCCCGAGCGGTCTAGGAGGTAGCCTGCACACCTGCTTGTGCGGAGGT
CGTGAGTTCGATTCTTGGCTAAGTCAGGATTTTAATTCTTGCTTCCGTAG
CGGAAAGCGTGAGAACGTGAGTAGGTAAAATTCAACAACTGGTTGACGAG
CTGTAAGAGTGATGAACTTGCATCGCGGTAAAAGTTCGTAAGGTGTGAAG
CTGGGAGAGATGGAACGAGGCCCATCGGCGCGGTTTAAAGTGAGAATGAA
AAGAAGAAGAAAAAAAGACATGGGCTATTCAATTGATTCAATTGTCAACA
GTACAATGTCGGAGAAAACCCGCCGTAATGCTGTACACTTCCCATAATCG
CCATGTAACACTGTAGTAATACTGTAGTAATGCCGCAACGGAAACGCGGA
GACACACGCTATCGGCCGTACTCTATTAATAGTTGAATGCATTTACATCG
ATACTGTTTGTTTTACTACAGGGTATATCTCTGTGATGCGAAGAAAGGAT
AACGGTACACGAGTTATTGTCCACTCATTTATCCCTAACAACTAAAAAGG
GTTGGGGATGTCTGTCGTGGTGCATCCGGAGGATGAGCATGTCACCGAGG
GCGTGATTAGAGTCTTAAATGTCTCCAACAAGGAACATAAAAAGAAGGAT
GGTTATTAATACTAGTCTTGGGAATCACCCACGAGGCACCATAACTCGTC
CTTCACATGTGTAGCAGTCGTGACAGGGCAGCGAAGCGAAGGGGCGACAC
ATATGAAGCCAGACGTAGGCGAGAACGGCGCCAAAGCCACCGCTCCCCGT
CTGCTAAACACCACAGTATAGTACTTTAGTGTAGAGTCTATTAGTAGTTC
TCTAGGCTTATTCTTGTACCTCTACGAGGAAGAAACCTTCAAACAAGCGC
TGTTCACAGAACTTCAGTAGTAGACCGACTGTCTCCGTTTGGACTTGTCG
ATGTTTGATGTTTGTCTTCTTCTGCCTTGGTACAATATTCAGCGGTTTGT
CTGCGGCATTCCCTTTCCGTGTTGTGCGTTAGGACGCTCTGGAGGTGACC
CATCGGCTTGTCGATCAAGTTGATGACCACTTCGGCAGGGCCCACGGCGT
CTACGCGAGCGCTCTGAGCGATATGGCTCTAATGATGAAATCCATGGGAC
AGCACAAGGAAGCGACGGAAGTATACCTCAAGGCGTTGGAGGTGAGCAAT
CATGTCGCCCTTTTCATGAACAACAAGGAGACCCTCACAGGTTGACATAA
TAGCTACGCTCATGCAAATGAGGTACCCAAGAAAAACGCGGATGGCTTAT
TGCCTGTTCGGGCTTGCGAAGTTTGGAGGGCTTGACTTGAAATTTGAGAG
AACTCCACGTGGTAGGGCATCATGTCGAACGCGAATCGATTGCCTTGATT
AAAATTAGAATCAACACACAATGAAGAAAAGCCTCAGAACTAATAGTTTT
TTTCCCATCGCTAGATTATTCAGACAGTTCGCCACACCAGCCGCTCCGGC
GATGAAAACAATGTCCGTATCCCACAAGTTTTCTCGTATTTATCGGGATT
GGACGTTTTGTGCTGTGGTCGGTAGTCGTACGAAAAAGGGCGAGACCTAC
GAGACTCGATATCAATCTCGCCCAAACTGTTACTATTATAGTTGATAACC
TAAAATAGCTCATTGCGTAGTCAAAATACGCCGTGGTTTAATGAGCGCCA
AAAAACGTTGTCGACTGTTATGATCAGTCAACATTCTGAGGGAACGAGTC
TTTGTAGTCCCATTCCATGTTGACTGGGATGACCGACACCACAGCGCGAG
ACAACTCCGGGCGTCAACCTTCTTGCGTCCTTACCTTTATATGTCATCCT
CCTGTGGCTTCCACTCGCGGCTCGTATACTCAACCGCTATGGCTTCTTAG
TTTTTGAGCGCCCCTGTTTGCATGTAATCTGTCATCTGTCGCTTTTGTCT
TATAATAGGTGTACCGAGAAGTTTACAAGGGCGAGGAGAATGCCTCCTTC
GCTAGCACTCTGCATAACCTGGGCATGGCGTTCCGAGCCATGGCCGAGGA
GTCTAGAAAGCTAGAGCAGATCCCTCTGCTTGAGCGCGCGGCCGAAGCTT
TCGATCGATGTACACAGATACGCGAAAAGGTGAGCGTGTGCAGAACGAGC
ATACCGCGAAACGCTTGCAGGGAGCTCCGGGTGGTCGGTATTCTCTAACA
GCAGACATCCCGGAAACTATAAACCTCCTGGCAATTTGAAGTACCGTTAT
TATCACAGAAGAGCTGCCCAATTCTAACCGTGAAATTAAGTGTTTTTGTT
CAGCACCCGGAAACGATTTGGACCGTCTTGCCTTCCAGCTTCGGAAGCCG
AAATATGCAACGTGTAGCGTAAGCCACAATTTAAGACGCGTGTGCTTAGC
TTCAGTGTATTTCGAATTTTGAGCCGGTTGTTACTATATTATCTTCAGAC
ATGCCAGTCGTTCGGTTTCGTTCGGTTTCAACCATCCTTTCGTGGGCGAA
GAGAAGTGATCGGGAGATATGGTGCTATTAATAGCAGCTCAAGCATCTTC
AATGAGAGAAGCGAAGGGGTGCATTCAAATCACAGTTCCTCCTATAAGTG
ATTTGTGCCGTTTAGTTGTAGGCTGCCTGCAAAAGCTTGACGAGAATGCC
CTCTTCGATCCTTCTCGCCGGCCGCTGGTCCCAGATCTTGACAAATAATC
ACCCAGACCTTCAGCTGGCACGAAGCAGACTAGCGATGGTCCAGAGCTTG
CTGGGTAGCGAAAAGGAAGAAACCGAGGCAAAGCTTCGGGCGGCCTTGGA
CGGCCTCCAGATGGCCGTGGGCGATGGTGATGCAAGTACAGCCAACGCCA
TGACTAACCTGGCACTTTTCCTCAAAGGGGAGGAGCAGTACGAGGAGGCA
ACAAAGCTCTTTACCACTGCGCTTGAAACGAGGTGACAATTCCACGGTTC
TATTTTTCGTCGTGCGCCTCGCGTTCGAATACCCAGTGTTGACCTCTTGA
CATCAGTGCCCTGCGGGTTTTTTTTGACCTGCGTTTACTATACTAATGGA
ATCCACGTCAACGTTAGTGGGAGGGCGAGGGGCTCGAGTCATGTGTTGTA
ACGCGTCTGTATCCGTGTTTTTTCATGTTTCTCTAGTGGTGGCAAGGGAA
GCAGTTCACCTTGCGCTTCCCATCATCGTGTGCGCCCCTCTTCCGTGAAC
TGAAAAATCGAGGCTCACGCCCTAGAGCTACCTCGCCCCACCTCCCCAAT
GGCTATTGTTGTGCAGAAAGGAACTCTACGGTCCAAAGCACGTCGATGTC
TTGGTATCAATGCACAATCTGTCGATGATGCACTTCGCCGCGGGACGCGA
GGACGAGGCGGTTGAACTGCAGGAAGCGATTGGTCGAATAGGGGACGAGC
TGGGAGTGACGGAGGAAGAGCAGGTAGAGGCTGGTGGTGGCGGCAGCGAA
GGAATGGCGGAAGACGCCGCGGTAACCCGAAAAGACACGGAACACCCAGA
GAAGCAGAGGCAGGAGATCAATCGTAAGCCAGAGAAAGGGAAAGGGGGCG
AGGAGTCGGACACAGCATGGAGACCTGGAAAAAATAATTGAGACTCCCTG
CATCTACTGTACATGCCTGCTTTTCCGGAGGGTTTCCTTCAGAACCCCTC
GCATGCTGCTGTAGGGTAGAGTGTGCAGTCCGGGGTAGAGTGGCCCTTAC
CACCTTGGTATCTCTCTTCGGAGCACAGCAACTCGGACTGGGTGATGTTT
GGTCGAACACCCAAAAAAATATTTCTACCCACGAGAGGTAGCTCCAAGGG
ACGGCTAACTGCGGCGATATCCTTCACAAAGACGCTTTTATTGCAATTCG
TTTCTGCAGGATGATTGTCCAAATTACGTAGATATTATAGAAAAATAGTA
CCGGTAGCTGGTACGGCCACTAAACAGAACACCTAAACTCAGGGTGGCGC
CGCAAATAATCGAATGCTTCATTTACGAGTACTAGTACCGTACGTGTTTC
CAAATCGCGCCCTGAGAGATCAGCACGGCACAGGTCAGCTTTAAAACCCT
CTTATTAATAGTGCATTGCGAAGAAATCTACAGGAGACGCGACAACGCAG
GTGTCCCGTAGGGATGACGAACAG
back to top

Coding sequence (CDS) from alignment at F-serratus_M_contig90:359764..372137-

>mRNA_F-serratus_M_contig90.20396.1 ID=mRNA_F-serratus_M_contig90.20396.1|Name=mRNA_F-serratus_M_contig90.20396.1|organism=Fucus serratus male|type=CDS|length=2616bp|location=Sequence derived from alignment at F-serratus_M_contig90:359764..372137- (Fucus serratus male)
ATGAGAAGAGTCGCGTGTGGTTTCACAAGAGTGTTGCGGGGACCATCCTC
TTCAAGCTTGAGGGTGTTAAAATCCAGAGTGGTTTGGCATGGTGCGAGTA
CTTTGGCGTCCCCCCATGATTTTCTTTCATCATTACGAAGGGATCGTGTC
AAGTGCAACCCTGCACAAACCACCGGCTTCTTGAACAGGGCGAGGCACTT
GGCATCGAGTTCGTCCCCGCAGCCTCCATCCAACTCCACCGAAAAAGAAT
CGTCTGCAGTATCTACTTTAGCGTCCAACGAAGGGGCGTCAAAGTCGTTG
ACGGGGCCTAGGATCACCTCCAAGAAGGGTTATCTCGAGCGAGAAAATAT
GATCCGGGAGACCCAGAAGGCTGTTCGACAGTACTATCAAGAGGGCATGT
ACCAGATGAGAAGAGTCGCGTGTGGTTTCACAAGAGTGTTGCGGGGACCA
TCCTCTTCAAGCTTGAGGGTGTTAAAATCCAGAGTGGTTTGGCATGGTGC
GAGTACTTTGGCGTCCCCCCATGATTTTCTTTCATCATTACGAAGGGATC
GTGTCAAGTGCAACCCTGCACAAACCACCGGCTTCTTGAACAGGGCGAGG
CACTTGGCATCGAGTTCGTCCCCGCAGCCTCCATCCAACTCCACCGAAAA
AGAATCGTCTGCAGTATCTACTTTAGCGTCCAACGAAGGGGCGTCAAAGT
CGTTGACGGGGCCTAGGATCACCTCCAAGAAGGGTTATCTCGAGCGAGAA
AATATGATCCGGGAGACCCAGAAGGCTGTTCGACAGTACTATCAAGAGGG
CATGTACCAGGACGCTCTGGAGGTGACCCATCGGCTTGTCGATCAAGTTG
ATGACCACTTCGGCAGGGCCCACGGCGTCTACGCGAGCGCTCTGAGCGAT
ATGGCTCTAATGATGAAATCCATGGGACAGCACAAGGAAGCGACGGAAGT
ATACCTCAAGGCGTTGGAGGACGCTCTGGAGGTGACCCATCGGCTTGTCG
ATCAAGTTGATGACCACTTCGGCAGGGCCCACGGCGTCTACGCGAGCGCT
CTGAGCGATATGGCTCTAATGATGAAATCCATGGGACAGCACAAGGAAGC
GACGGAAGTATACCTCAAGGCGTTGGAGGTGTACCGAGAAGTTTACAAGG
GCGAGGAGAATGCCTCCTTCGCTAGCACTCTGCATAACCTGGGCATGGCG
TTCCGAGCCATGGCCGAGGAGTCTAGAAAGCTAGAGCAGATCCCTCTGCT
TGAGCGCGCGGCCGAAGCTTTCGATCGATGTACACAGATACGCGAAAAGG
TGTACCGAGAAGTTTACAAGGGCGAGGAGAATGCCTCCTTCGCTAGCACT
CTGCATAACCTGGGCATGGCGTTCCGAGCCATGGCCGAGGAGTCTAGAAA
GCTAGAGCAGATCCCTCTGCTTGAGCGCGCGGCCGAAGCTTTCGATCGAT
GTACACAGATACGCGAAAAGATCTTGACAAATAATCACCCAGACCTTCAG
CTGGCACGAAGCAGACTAGCGATGGTCCAGAGCTTGCTGGGTAGCGAAAA
GGAAGAAACCGAGGCAAAGCTTCGGGCGGCCTTGGACGGCCTCCAGATGG
CCGTGGGCGATGGTGATGCAAGTACAGCCAACGCCATGACTAACCTGGCA
CTTTTCCTCAAAGGGGAGGAGCAGTACGAGGAGGCAACAAAGCTCTTTAC
CACTGCGCTTGAAACGAGATCTTGACAAATAATCACCCAGACCTTCAGCT
GGCACGAAGCAGACTAGCGATGGTCCAGAGCTTGCTGGGTAGCGAAAAGG
AAGAAACCGAGGCAAAGCTTCGGGCGGCCTTGGACGGCCTCCAGATGGCC
GTGGGCGATGGTGATGCAAGTACAGCCAACGCCATGACTAACCTGGCACT
TTTCCTCAAAGGGGAGGAGCAGTACGAGGAGGCAACAAAGCTCTTTACCA
CTGCGCTTGAAACGAGAAAGGAACTCTACGGTCCAAAGCACGTCGATGTC
TTGGTATCAATGCACAATCTGTCGATGATGCACTTCGCCGCGGGACGCGA
GGACGAGGCGGTTGAACTGCAGGAAGCGATTGGTCGAATAGGGGACGAGC
TGGGAGTGACGGAGGAAGAGCAGGTAGAGGCTGGTGGTGGCGGCAGCGAA
GGAATGGCGGAAGACGCCGCGGTAACCCGAAAAGACACGGAACACCCAGA
GAAGCAGAGGCAGGAGATCAATCGTAAGCCAGAGAAAGGGAAAGGGGGCG
AGGAGTCGGACACAGCATGGAGACCTGGAAAAAATAATTGAAAAGGAACT
CTACGGTCCAAAGCACGTCGATGTCTTGGTATCAATGCACAATCTGTCGA
TGATGCACTTCGCCGCGGGACGCGAGGACGAGGCGGTTGAACTGCAGGAA
GCGATTGGTCGAATAGGGGACGAGCTGGGAGTGACGGAGGAAGAGCAGGT
AGAGGCTGGTGGTGGCGGCAGCGAAGGAATGGCGGAAGACGCCGCGGTAA
CCCGAAAAGACACGGAACACCCAGAGAAGCAGAGGCAGGAGATCAATCGT
AAGCCAGAGAAAGGGAAAGGGGGCGAGGAGTCGGACACAGCATGGAGACC
TGGAAAAAATAATTGA
back to top