mRNA_F-serratus_M_contig90.20385.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig90.20385.1 vs. uniprot
Match: D7FKG3_ECTSI (DNA-(apurinic or apyrimidinic site) endonuclease n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKG3_ECTSI) HSP 1 Score: 431 bits (1108), Expect = 3.370e-141 Identity = 263/524 (50.19%), Postives = 311/524 (59.35%), Query Frame = 1
Query: 1 KTEERREFKRDFLAMLEARIFEIQERARAVLLVGDLNLCASQMDHGFTMTDAEFYASNWSKWIRSILGLNPSDPPRLVDCFRRIHPDRKNAFTCWNTVTGARENNYGTRIDYILAGITFAEQALEGCDIMPQFLGSDHCPVRARFNLLSEAGCRTDK--QSDGTD-TRLLHAGEWREHPPECSCFYEELAAKQEKLAKYFFVTGDSNSAAPAGAAGGGAANGVGRESTDDIERENLSMTVGSSGGEDTGSRQMISTMLARDSRDG----GRHVLRGKNTVSEERSRCRKEKQGH----RNIGSSRARQSKLTFASSSNRTLSRD----SAEPRALPSRHMKGDRKREIELAP----------------------------GMHL--GGSDVADS---------------TNPEREPDIDGGVSDSR-----SQDVSAEAWRAIFGRNKSTPPCEHGEPSIQRTVLKPGQNHNRRFYTCARSAGNWPIDRNARCNFFQWRLDGVKGYKDRPVE----TDAKRQRR 1365
KTE+RR FKRDFLA LEARIFEI+ R R V+LVGDLN CASQ+DHGFTMTD+EFYASNWSKWIR +LGL +PPRLVDCFR +HPDRK+AFTCWNT TGAR+NNYGTRIDYI+AG FA++AL CDIMP FLGSDHCPVRARF AG D +S+G + R A EW EHPPECSCFY EL AKQEKLAKYF V G N + G G GA + R+ RE+ + + GG+ + +DG G ++RGK S R+ G R GS +RQSKL F ++N +S S E A + G +R P +H GG D A + +NP E ++ G + S+D SAEAW+AIFGR KS P CEHGEPSIQRTVLKPG NHNRRFYTCARSAGNWP DRNARC FFQWR DGV+GYKD+P T++ ++RR
Sbjct: 176 KTEDRRAFKRDFLATLEARIFEIRSRGRGVVLVGDLNACASQLDHGFTMTDSEFYASNWSKWIRGMLGLGSPEPPRLVDCFRHLHPDRKSAFTCWNTQTGARDNNYGTRIDYIIAGTDFADRALRACDIMPDFLGSDHCPVRARFAFPLAAGLAADAPGESEGDEIARSRSASEWPEHPPECSCFYPELTAKQEKLAKYF-VAGGQNEESAVGTEGKGADGRLVRDGNG--ARESGATRPAAGGGKGVAAFMRALPGAGVTGKDGASVAGSLMMRGKKVGSVGRTSSTSSSGGGSLTARRPGSGGSRQSKLAFGPAANGNVSTSAGATSREATAGGNGAGSGTSRRAEGTVPLRTCNQRGXXXXXXXXAQTSQAIQPPRSRVHASGGGHDTAGAGGGSGSVSTIGSCRLSNPGGEGGVETGPGEGPNGGGGSRD-SAEAWKAIFGRKKSAPTCEHGEPSIQRTVLKPGPNHNRRFYTCARSAGNWPTDRNARCTFFQWRRDGVRGYKDKPPRAEGGTNSNKKRR 695
BLAST of mRNA_F-serratus_M_contig90.20385.1 vs. uniprot
Match: A0A6H5KUC8_9PHAE (DNA-(apurinic or apyrimidinic site) endonuclease 2 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUC8_9PHAE) HSP 1 Score: 370 bits (951), Expect = 1.310e-117 Identity = 233/483 (48.24%), Postives = 275/483 (56.94%), Query Frame = 1
Query: 97 VGDLNLCASQMDHGFTMTDAEFYASNWSKWIRSILGLNPSDPPRLVDCFRRIHPDRKNAFTCWNTVTGARENNYGTRIDYILAGITFAEQALEGCDIMPQFLGSDHCPVRARFNLLSEAGCRTDK--QSDGTD-TRLLHAGEWREHPPECSCFYEELAAKQEKLAKYFFVTGDSNSAAPAGAAGGGAANGVGRESTDDIERENLSMTVGSSGGEDTGSRQMISTMLARDS-----RDG----GRHVLRGKNTVSEERSRCRKEKQGHRNI----GSSRARQSKLTFASSSNRTLSRDS-AEPRALPSR---HMKGDRKRE---IELAPG---------------------MHL--GGSDVADS---------------TNPEREPDIDGGVSDSR-----SQDVSAEAWRAIFGRNKSTPPCEHGEPSIQRTVLKPGQNHNRRFYTCARSAGNWPIDRNARCNFFQWRLDGVKGYKDRPVETD 1347
VGDLN CASQ+DHGFTMTD+EFYASNWSKWIR +LGL +PPRLVDCFR +HPDRK AFTCWNT TGAR+NNYGTRIDYI+AG FA++AL CDIMP FLGSDHCPVRARF G D +S+G + R E EHPPECSCFY EL AKQEKLAKYF V G N + G G GA + + I N + G + G R +++ M A +DG G ++R K S R+ GS +RQSKL F +N +S + A R P+ + G R+R + L G +H GG D A + + P +D G + S+D SAEAW+AIFGR KS P CEHGEPSIQRTVLKPG NHNRRFYTCARSAGNWP DRNARC FFQWR DGV+GYKD+P +
Sbjct: 221 VGDLNACASQLDHGFTMTDSEFYASNWSKWIRGMLGLGSPEPPRLVDCFRHLHPDRKGAFTCWNTQTGARDNNYGTRIDYIIAGTDFADRALRACDIMPDFLGSDHCPVRARFAFPLAVGLAADAPGKSEGDEIARSRSESELPEHPPECSCFYPELTAKQEKLAKYF-VAGGQNEESAVGTEGKGAYDRL-------IGDRNGAGASGVTRPAAGGRRGVVAFMRALPGTGVTGKDGAGVAGSLMMRAKKVGSAGRTSXXXXXXXXXXXXXRPGSGGSRQSKLAFGPVANDNVSTSAGAASREAPAGGRGEVSGTRRRAEGAVPLRTGNERAGGGGAQTSQAIQPPRSTVHASGGGHDTAGAXXXXXSVSTIGSSRISKPXXXXXVDTGSGEGPNGAGGSRD-SAEAWKAIFGRKKSAPTCEHGEPSIQRTVLKPGPNHNRRFYTCARSAGNWPTDRNARCTFFQWRRDGVRGYKDKPPRAE 694
BLAST of mRNA_F-serratus_M_contig90.20385.1 vs. uniprot
Match: A0A835ZDF2_9STRA (DNA-(apurinic or apyrimidinic site) endonuclease 2 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDF2_9STRA) HSP 1 Score: 159 bits (401), Expect = 2.370e-38 Identity = 163/561 (29.06%), Postives = 205/561 (36.54%), Query Frame = 1
Query: 1 KTEERREFKRDFLAMLEARIFEIQERARAVLLVGDLNLCASQMDHGFTMTDAEFYASNWSKWIRSILGLNPSDPPR-------------------------------------------------------LVDCFRRIHPDRKNAFTCWNTVTGARENNYGTRIDYILAGITFAEQALEGCDIMPQFLGSDHCPVRARFNLLSEAGCRTDKQSDGTDTRLLHAGEWREHPPECSCFYEELAAKQEKLAKYFFVT-----------------GDSNSAAPAGAAGGG---------------AANGVGRESTDDI------ERENLSMTV----GSSGGEDTGSRQMISTMLARDSRDGGRHVLRGKNTVSEERSRCRKEKQGHRNIG----SSRARQSKLTFASSSNRTLSRDSAEPRALPSRHMKGDRKREIELAPGMHLGGSDVADSTNPEREPDIDGGVSDSR---SQDVSAE-AWRAIFGRNKSTPPCE-HGEPSIQRTVLKPGQNHNRRFYTCARSAGNWPIDRNARCNFFQWRLDGVKGYKDRPVETDAKRQRR 1365
+ EERR FKRDF A LEAR ++ R V+L GDLN CAS DH F M++A+F AS WS+WIR +LG + VDCFRR +P + AFTCWNT GAR NNYGTRIDY+LA FA AL I P +GSDHCPV A F+ R A HPP+CSCF +A KL +F T DS S P A AA V +E D I R + GSSGG G + K+G + + A + DG SD+ S V A+ AW+A+ + + P C H EP+++RTVLK G N RRFY CAR G+WP D NARCN+F++R G +GY+ D +R +R
Sbjct: 149 RAEERRHFKRDFNAALEARARQLVRAGRHVVLAGDLNACASPRDHCFAMSEADFLASPWSRWIRRMLGRSLESAAADGDDGDGDSYALSNGASAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFVDCFRRANPAAERAFTCWNTKKGARANNYGTRIDYVLASAAFARAALRASAIWPHVVGSDHCPVVATFDA----------------PRAHAAAAAAPHPPQCSCFLAAVAVP--KLTAFFAPTRVRSGXXXXXXXXXDNASDSASQPPELACEAAEEDSTLSCEALFDVPAARFV-QEPQDPILPPPCIPRAGATAVAPFFSGSSGGGANGVPRAQGFTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRGMTQMTLKAFGAAAPRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGRGSDASRAGSSGVDAKSAWQALLAK-RPPPVCSGHREPAVERTVLKAGPNQGRRFYCCARGEGDWPKDPNARCNYFEFRESGARGYRADARARDQQRAKR 689
BLAST of mRNA_F-serratus_M_contig90.20385.1 vs. uniprot
Match: A0A6P7MXP0_BETSP (DNA-(apurinic or apyrimidinic site) endonuclease n=1 Tax=Betta splendens TaxID=158456 RepID=A0A6P7MXP0_BETSP) HSP 1 Score: 149 bits (376), Expect = 1.660e-35 Identity = 134/455 (29.45%), Postives = 202/455 (44.40%), Query Frame = 1
Query: 10 ERREFKRDFLAMLEARIFEIQERARAVLLVGDLNLCASQMDHGFTMTDAEFYASNWSKWIRSIL-----------------GLNPSDPP---RLVDCFRRIHPDRKNAFTCWNTVTGARENNYGTRIDYILAGITFAEQALEGCDIMPQFLGSDHCPVRARFNLLSEAGCRTDKQSDGTDTRLLHAGEWREHPPE-CSCFYEELAAKQEKLAKYFFVTGDSNS--AAPAGAAGGGAANGVGRESTDDIERENLSMTVGSSGGEDTGSRQMISTMLARDSRDGGRHVLRGKNTVSEERSRCRKEKQGHRNIGSSRARQSKLTFASSSNRTLSRDSAEPRALPSRHMKGDRKREIELAPGMHLGGSDVADSTNPER-EPDIDGGVSDSRSQDVSAEAWRAIFGRNKSTPPCE-HGEPSIQRTVLKPGQNHNRRFYTCARSAGNWPIDRNARCNFFQW 1299
ER++FK F +L+ R + V+++GD+N +DH + +F + KW+ L G+ P+D R VD FR HP R NAFTCW+T+TGAR+ NYGTRIDYI A AE+ DIMP+ GSDHCPV + + LL + + PP C+ + E A KQ+KL++ FFV D S + G +G RE+ + +E EN+ T+++ G+ K++ + S K N+ T AS ++ S DS P+A R R E + S V + + +P ++ G +++R + S W+++F P C+ HGEP + RTV K G N ++F+ CAR G+ + ARCNFF+W
Sbjct: 151 ERKQFKLQFYKLLQCRAEALLNAGSHVIVLGDVNTSHRPIDHCDSSEIDDFEENPGRKWLNGFLHSGKQEADGNQEEHDESGIPPADSVHAGRFVDTFRHFHPTRTNAFTCWSTLTGARQTNYGTRIDYIFADCQLAEEYFVAADIMPEVEGSDHCPVWGQLSC-----------------PLLPSSK----PPSLCTRYLPEFAGKQQKLSR-FFVKVDQRSVQSQQKEELPGSQDDGERRENLNPLESENVKKR----------------TLISESDAPKGKKTKIVKSSSKPQGSLLSFFKPKLTNVPP--------TEASVRSQMTSEDS--PKASTIREKASVADRSPEDTEAVCESSSQVEEQIKSKHSDPQVNVGPTEARKGE-SLVFWKSVFRGPPPAPSCKVHGEPCVLRTVKKEGPNMGKQFFVCARPQGH-ASNPEARCNFFEW 555
BLAST of mRNA_F-serratus_M_contig90.20385.1 vs. uniprot
Match: A0A3Q1KFB8_ANATE (DNA-(apurinic or apyrimidinic site) endonuclease n=1 Tax=Anabas testudineus TaxID=64144 RepID=A0A3Q1KFB8_ANATE) HSP 1 Score: 149 bits (375), Expect = 2.590e-35 Identity = 132/472 (27.97%), Postives = 203/472 (43.01%), Query Frame = 1
Query: 10 ERREFKRDFLAMLEARIFEIQERARAVLLVGDLNLCASQMDHGFTMTDAEFYASNWSKWIRSILGL---------------------NPSDPPRLVDCFRRIHPDRKNAFTCWNTVTGARENNYGTRIDYILAGITFAEQALEGCDIMPQFLGSDHCPVRARFNLLSEAGCRTDKQSDGTDTRLLHAGEWREHPPECSCFYEELAAKQEKLAKYFFVTGDSNSAAPAGAAGGGAANGVGRESTDDIERENLSMTVGSSGGEDTGSRQMISTMLARDSRDGGRHVLRGKNTVSEERSRCRKEKQGHRNIGSSRARQSKLTF-------------ASSSNRTLSRDSAEPRALPSRHMKGDRKREIELAPGMHLGGSDVADSTNPERE-------PDIDGGVSDSRSQDVSAEAWRAIFGRNKSTPPCE-HGEPSIQRTVLKPGQNHNRRFYTCARSAGNWPIDRNARCNFFQW 1299
ER++FK F +L+ R I + V+++GD+N +DH +F + KW+ S L +P P + VD FR HP R NAFTCW+T+TGAR+ NYGTRIDY+ A A++ DIMP+ GSDHCPV + + LL + + PP C+C+ E A KQ+KL+++ V ++S +RE L G ++ G R+ A ++ + VL + VS K K+ SS + S L+F A++ T S ++++ + R E + G S V S N E + P + G S+++ ++ S W+++ + P C+ HGEP + RTV K G N ++F+ CAR G+ + ARCNFF W
Sbjct: 151 ERKQFKLQFYKLLQCRAEAILKDGSHVIVLGDVNTSHQPIDHCDPSDIDDFGENPGRKWLNSFLHSGKQVEDRNNKDPDEELEATPPDPVHPGKFVDTFRYFHPTRTNAFTCWSTLTGARQTNYGTRIDYVFADCQLAKEYFVAADIMPEVEGSDHCPVWGQLSC-----------------PLLPSPK---PPPLCTCYLPEFAGKQQKLSRFLVK--------------------VDQKSVQSEQREALP------GSQEDGERRENLNPSAAENVSSKKRVLISDSAVS-------KGKKAKTLKASSTPQGSLLSFFKPNLKHVVPSSEANARGETTSSENSQKASTTREKGSSVTGRVPEDTELLLKGSSQVFPSNNVEEQIKTKHSTPQPNRGPSNAKKKE-SLVFWKSVLHGPPAAPSCKVHGEPCVLRTVKKEGPNMGKQFFVCARPQGH-ASNPEARCNFFAW 567
BLAST of mRNA_F-serratus_M_contig90.20385.1 vs. uniprot
Match: A0A3B3BB14_ORYME (DNA-(apurinic or apyrimidinic site) endonuclease n=3 Tax=Oryzias TaxID=8089 RepID=A0A3B3BB14_ORYME) HSP 1 Score: 148 bits (374), Expect = 2.800e-35 Identity = 137/465 (29.46%), Postives = 199/465 (42.80%), Query Frame = 1
Query: 10 ERREFKRDFLAMLEARIFEIQERARAVLLVGDLNLCASQMDHGFTMTDAEFYASNWSKWIRSILG------------------LNPSDPPRLVDCFRRIHPDRKNAFTCWNTVTGARENNYGTRIDYILAGITFAEQALEGCDIMPQFLGSDHCPVRARFNLLSEAGCRTDKQSDGTDTRLLHAGEWREHPPECSCFYEELAAKQEKLAKYFFVTGDSNSAAPAGAAGGGAANGVGRESTDDIERENLSMTVGSSGGEDTGSRQMISTMLARDSRDGGRHVL-RGKNTVSEERSRCRKEKQGH---------RNIGSSRARQSKLTFASSSNRT-LSRDSAEPRALPSRHMKG-----DRKREIELAPGMHLGGSDVADSTNPEREPDIDGGVSDSRSQDVSAEAWRAIFGRNKSTPPCE-HGEPSIQRTVLKPGQNHNRRFYTCARSAGNWPIDRNARCNFFQW 1299
ER++FK F +L+ R + + V+++GD+N Q+DH +F + KW+ L NP++P R VD FR HP R NAFTCW+T+TGAR+ NYGTRIDYI A AE+ DIMP+ GSDHCPV + + A + P C+ + E KQ+KL++ F + D S+ P V S DD ER V SG ++ LA DS VL +GK T + S + QG+ N+ + +++KLT + SRDS+ A + H D++++ P L S+ S+ W++I + P C+ HGEP + RTV K G N ++F+ CAR G+ + ARCNFF+W
Sbjct: 152 ERKQFKLQFYKLLQCRAEAVLKDGSHVIVLGDVNTSHRQIDHCDPCETNDFDENPGRKWLNDFLHNSSPEDPDXXXXXXLSELKNPTNPGRFVDTFRLFHPTRANAFTCWSTLTGARQTNYGTRIDYIFADCKLAEEQFVATDIMPEVEGSDHCPVWGKLSCSLLASSKP--------------------PLLCTRYLPEFVGKQQKLSR-FLIKMDQKSSQPE-------QKSVLPASQDDDERRE---NVNPSGANKVSDKKRS---LASDS------VLPKGKKTKTVNSSL---KPQGNLLSFFKPKVTNVNH-QEKETKLTSPQGDQKVETSRDSSSTAAAETEHASNASLDTDKRKKTACQPTAAL-------------------------SKVASSGFWKSILHGPPTAPSCKVHGEPCVLRTVKKEGPNMGKQFFVCARPQGH-ASNPEARCNFFEW 546
BLAST of mRNA_F-serratus_M_contig90.20385.1 vs. uniprot
Match: H2MG90_ORYLA (DNA-(apurinic or apyrimidinic site) endonuclease n=7 Tax=Oryzias TaxID=8089 RepID=H2MG90_ORYLA) HSP 1 Score: 145 bits (366), Expect = 3.510e-34 Identity = 134/455 (29.45%), Postives = 204/455 (44.84%), Query Frame = 1
Query: 10 ERREFKRDFLAMLEARIFEIQERARAVLLVGDLNLCASQMDHGFTMTDAEFYASNWSKWIRS---------ILGLNPSDPP-----RLVDCFRRIHPDRKNAFTCWNTVTGARENNYGTRIDYILAGITFAEQALEGCDIMPQFLGSDHCPVRARFNLLSEAGCRTDKQSDGTDTRLLHAGEWREHPPECSCFYEELAAKQEKLAKYFFVTGDSNSAAPAGAAGGGAANGVGRESTDDIER-ENLSMTVGSSGGEDTGSRQMISTMLARDSRDGGRHVLRGKNTVSEERSRCRKEKQGHR------NIGSSRARQSKLTFASSSN---RTLSRDSAEPRALPSRHMKGDRKREIELAPGMHLGGSDVADSTNPEREPDIDGGVSDSRSQDVSAEAWRAIFGRNKSTPPCE-HGEPSIQRTVLKPGQNHNRRFYTCARSAGNWPIDRNARCNFFQW 1299
ER++FK F +L+ R + + V+++GD+N +DH EF + KW+ +L +P P R VD FR HP R NAFTCW+T+TGAR+ NYGTRIDYI A AE+ DIMP+ GSDHCPV + + C S + PP C+ + E KQ+KL++ F + D S+ P V S +D ER EN++ + G+ + +LA DS + +GK T + S + QG+ + + + ++ + TF SS + SRDS+ P+ + +R + L AD +P + ++S+ S W+++ P C+ H EP + RTV K G N ++F+ CAR G+ + ARCNFF+W
Sbjct: 152 ERKQFKLQFYKLLQHRAEAVLKAGSHVIVLGDVNTSHRPIDHCDPCETNEFEDNPGRKWLNEFLHNGSPEDVLDEDPKQAPELNSGRFVDTFRLFHPTRTNAFTCWSTLTGARQTNYGTRIDYIFADCKLAEEQFVATDIMPEVEGSDHCPVWGKLS------CSVLPSS--------------KPPPLCTRYLPEFVGKQQKLSR-FLIKVDQKSSQPE-------QKSVLPGSQEDDERTENVNPS---------GANSVKKRLLAADS-----VIPKGKKTKMQSSS---SKPQGNLLSFFKPKVANLKDQEKETTFTSSQSDQKAKASRDSST--VTPAAAEETERASDASSQRCTVLD----ADKQKNTVQPTV------AQSKGASLGFWKSVLHGPPPAPSCKVHREPCVLRTVKKEGPNVGKQFFVCARPQGH-ASNPEARCNFFEW 548
BLAST of mRNA_F-serratus_M_contig90.20385.1 vs. uniprot
Match: A0A6I9NNE1_9TELE (DNA-(apurinic or apyrimidinic site) endonuclease n=4 Tax=Notothenioidei TaxID=8205 RepID=A0A6I9NNE1_9TELE) HSP 1 Score: 144 bits (362), Expect = 1.450e-33 Identity = 136/481 (28.27%), Postives = 209/481 (43.45%), Query Frame = 1
Query: 10 ERREFKRDFLAMLEARIFEIQERARAVLLVGDLNLCASQMDHGFTMTDAEFYASNWSKWIRSILG-------------LNPSDPP---RLVDCFRRIHPDRKNAFTCWNTVTGARENNYGTRIDYILAGITFAEQALEGCDIMPQFLGSDHCPVRARFNLLSEAGCRTDKQSDGTDTRLLHAGEWREHPPECSCFYEELAAKQEKLAKYFF------VTGDSNSAAPAGAAGGGAANGVGRESTDDIERENLSMTVGSSGGEDTGSRQMISTMLARDSRDGGRHVLRGKN--------------------TVSEERSRCRKEKQGHRNIGSSRARQ-----SKLTFASSSNRTLSR--DSAEPRALPSRHMKGDRKREIE-LAPGMHLGGSDVADSTNPEREPDIDGGVSDSRSQDVSAEAWRAIFGRNKSTPPCE-HGEPSIQRTVLKPGQNHNRRFYTCARSAGNWPIDRNARCNFFQW 1299
ER++FK F +L++R I + V+++GD+N Q+DH +F + KW+ L + SDP + +D FR HP R +AFTCW+T+TGAR+ NYGTRIDYI A A++ DIMP+ GSDHCPV + + C S PP C+C+ E A KQ+KL+++F + + A P G + +++ RENL S G +G +++++T + V +GK T + K+ G + SS+ Q SK T + +S+ T+ D A P+ S MK D+ ++ LAP DGG S ++ + S W+++ P C+ H EP + RTV K G N ++F+ CAR G+ + +ARC+FF W
Sbjct: 151 ERKQFKLQFYKLLQSRAEAILKDGSHVIVLGDVNTSHRQIDHCDPSDIEDFVENPGRKWLNGFLHSETNEEEPKEEPEVTSSDPVHGGKFMDTFRHFHPTRTSAFTCWSTMTGARQTNYGTRIDYIFADCQLAKEQFVAADIMPEVEGSDHCPVWGKLS------CSLLPSSKA--------------PPFCTCYLPEFAGKQQKLSRFFVKVDQKTIQSEHREALP------------GSQEEEEL-RENLKP---SGAGNASGKKRLLTTSDS--------VVPKGKKAKTCPKPQGSLLSFFKPKLPTAAPSTEAPEKKTLGTDKVTSSQNSQKACTTSKDTSSVTSSETVPELLDDASPKLCTS--MKSDKPMNLKPLAPAP-------------------DGGESGAK-KGASLGFWKSVLHGPPPPPSCKVHREPCVLRTVKKEGPNMGKQFFVCARPQGH-ASNPDARCSFFAW 564
BLAST of mRNA_F-serratus_M_contig90.20385.1 vs. uniprot
Match: A0A673CAA8_9TELE (DNA-(apurinic or apyrimidinic site) endonuclease n=1 Tax=Sphaeramia orbicularis TaxID=375764 RepID=A0A673CAA8_9TELE) HSP 1 Score: 143 bits (360), Expect = 2.590e-33 Identity = 138/477 (28.93%), Postives = 205/477 (42.98%), Query Frame = 1
Query: 10 ERREFKRDFLAMLEARIFEIQERARAVLLVGDLNLCASQMDHGFTMTDAEFYASNWSKWIRSILG------------------LNPSDPPRLVDCFRRIHPDRKNAFTCWNTVTGARENNYGTRIDYILAGITFAEQALEGCDIMPQFLGSDHCPVRARFNLLSEAGCRTDKQSDGTDTRLLHAGEWREHPPECSCFYEELAAKQEKLAKYFFVTGDSNSAAPAGAAGGGAANGVGRESTDDIERENLSMTVGSSGGEDTGSRQMISTMLARDSRDGGRHVLRGKNTVSEERSRCRKEKQGHRNIGSSRARQSKLTF-------------ASSSNRTLSRDSAEPRALPSRHMKGDRKREIELAPGMHLGGSD-VADSTNPE--------------REPDIDGGVSDSRSQDVSAEAWRAIFGRNKSTPPCE-HGEPSIQRTVLKPGQNHNRRFYTCARSAGNWPIDRNARCNFFQW 1299
ER++FK F +L+ R I + V+++GD+N +DH +F + KW+ L L + + VD FR HP R NAFTCW+T+TGAR+ NYGTRIDYI A AE+ DIMP+ GSDHCPV + + LL + + +PP C+ F E A KQ+KL++ F V D S I+ E + GS E+ R+ ++ A G + VL ++ + K K+ +S+ + S LTF A + L +D PS +KG ++ L L GS+ + S+ P+ +P + G SD++ + S+ W+++F PC+ HGEP + RTV K G N R+F+ CAR G+ + ARCNFF W
Sbjct: 151 ERKQFKLQFYKLLQGRAEAILKDGSYVIVLGDINTSHRTIDHCDPSDIDDFEENPGRKWLNCFLHSDKQEEESTDEEYNEAYKLTSTHDGKFVDTFRHFHPTRTNAFTCWSTLTGARQTNYGTRIDYIFADCQLAEEQFVAADIMPEVEGSDHCPVWGQLSC-----------------SLLPSSK---NPPLCTRFLPEFAGKQQKLSR-FLVKMDQKS----------------------IQSEQRNELPGSQ--EEEERRENLNPSGA-----GKKRVLTAESIIP-------KGKKTKTAKAASKPQGSLLTFFKPKITNVLPSTEAPERQKNLDQDEVTSPQNPS--VKGSVTKDATLV----LDGSEQLCTSSYPKDNDQGTKVKTPHLTSQPTV--GPSDTK-KGASSGFWKSLFHGPPPXXPCKVHGEPCVLRTVKKEGPNMGRQFFVCARPQGH-ASNPEARCNFFAW 560
BLAST of mRNA_F-serratus_M_contig90.20385.1 vs. uniprot
Match: H3CDK2_TETNG (DNA-(apurinic or apyrimidinic site) endonuclease n=2 Tax=Tetraodon nigroviridis TaxID=99883 RepID=H3CDK2_TETNG) HSP 1 Score: 141 bits (356), Expect = 3.030e-33 Identity = 132/469 (28.14%), Postives = 206/469 (43.92%), Query Frame = 1
Query: 10 ERREFKRDFLAMLEARIFEIQERARAVLLVGDLNLCASQMDHGFTMTDA----EFYASNWSKWIRSIL-GLNP----------------SDPP----RLVDCFRRIHPDRKNAFTCWNTVTGARENNYGTRIDYILAGITFAEQALEGCDIMPQFLGSDHCPVRARFNLLSEAGCRTDKQSDGTDTRLLHAGEWREHPPECSCFYEELAAKQEKLAKYFFVTGDSNSAAPAGAAGGGAANGVGRESTDDIERENLSMTVGSSGGEDTGSRQMISTMLARDSRDGGRHVLRGKNTVSEERSRCRKEKQGHRNIGSSRARQSKLTFASSSNRTLSRDSA-------------EPRALPSRHMKGDRKREIELAPGMHLGGSDVADSTNPEREPDIDGGVSDSRSQDVSAEAWRAIFGRNKSTPPCE-HGEPSIQRTVLKPGQNHNRRFYTCARSAGNWPIDRNARCNFFQW 1299
ER++FK F +L+ R I + V+++GD+N ++DH + +F + KW++ L G+ S PP + VD FR HP R NAFTCW+T+TGAR+ NYGTRIDYI A A + DIMP+ GSDHCPV + + + PP C+ + E A KQ+KL+ +FFV + NS+ P N + ++ +RENL+ T + +G +++ + + VL+GK T + + SS ++ S L+F + + D+ PR PSR GD K + +P + + N ++ P + + S+ W+++ P C+ H EP + RTV K G N R+F+ CAR G+ + +ARCNFF+W
Sbjct: 66 ERKQFKLQFYKLLQCRAEAILKDGSHVIVLGDINTSHQRIDHCDPSDNIHPKEDFDENPGRKWLKLFLHGIRQEEEENDQEHAEFSQVTSTPPGHGGKFVDTFRYFHPTRANAFTCWSTLTGARQTNYGTRIDYIFADHRLASEQFVAADIMPEVEGSDHCPVWGQLSCSLVPSTKP--------------------PPLCTRYLPEFAGKQQKLS-HFFVKAEQNSSLPEHR------NPLPGSQEEEEKRENLNPTA-----QKSGQKRLSKSDFS---------VLKGKKTKTVK--------------SSSNSQGSLLSFFKPTVTNVVADTPVRQCEKRPKQPQQPPRTSPSRPA-GDTK--LHNSPQLLSSAEE-----NGQQTPITRLTPQPAAKKGSSSGFWKSVLHGPPPPPSCKVHKEPCVLRTVKKDGPNMGRQFFVCARPQGH-ASNPDARCNFFEW 470 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig90.20385.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig90.20385.1 >prot_F-serratus_M_contig90.20385.1 ID=prot_F-serratus_M_contig90.20385.1|Name=mRNA_F-serratus_M_contig90.20385.1|organism=Fucus serratus male|type=polypeptide|length=443bp MLEARIFEIQERARAVLLVGDLNLCASQMDHGFTMTDAEFYASNWSKWIRback to top mRNA from alignment at F-serratus_M_contig90:162228..164678- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig90.20385.1 ID=mRNA_F-serratus_M_contig90.20385.1|Name=mRNA_F-serratus_M_contig90.20385.1|organism=Fucus serratus male|type=mRNA|length=2451bp|location=Sequence derived from alignment at F-serratus_M_contig90:162228..164678- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig90:162228..164678- >mRNA_F-serratus_M_contig90.20385.1 ID=mRNA_F-serratus_M_contig90.20385.1|Name=mRNA_F-serratus_M_contig90.20385.1|organism=Fucus serratus male|type=CDS|length=2658bp|location=Sequence derived from alignment at F-serratus_M_contig90:162228..164678- (Fucus serratus male)back to top |