mRNA_F-serratus_M_contig9.20352.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig9.20352.1 vs. uniprot
Match: A0A6H5JH94_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH94_9PHAE) HSP 1 Score: 206 bits (525), Expect = 1.730e-60 Identity = 112/271 (41.33%), Postives = 167/271 (61.62%), Query Frame = 1
Query: 7 IVSKTVVSPNLRMSVLVGLEGSGHHYLGQAVSDMFNSNDEISETTTPCIDIGAYYTKISMESSPYAYSCLCKHAREDMQNLALREQSLPWPGHLTHLCSEQSYPSGNGANKVVHYVDLRMLVEIAEEEGVDLRVVYLKRSAHDLLVANTVHRGFQETIGLDVNTTASDQRFTEYSLILLTNAAVVHSFLSEIDPAFVVCHDFAHAGEEEQAATVSNFVAPNSVMAEMFKTSLLRAWTEHSSQWEELSFDGAEAVASRLQQKLDAFEPLYCG 819
I+ KT VS R+ + GLEG+GHHY+ A + +F N + +I YY + M + ++ +A E+M+ LA +L PG L SYP +G KV+ Y+DL M+ E AE G+D RV+YL+RSA ++++ANTVHR F +G D T ++ F +Y +L T+ AV+HSFL EI P FVVCHD+ G++EQA+T+++F++PN +A + ++SL++ + SS+ + L F+ A AV RLQ+KLDAFE LYCG
Sbjct: 138 ILPKTHVSDVFRLVFVAGLEGTGHHYVMWANASLFGDNMNLPRRYGHGKEIYEYYAPLKMGQNVKQFTMSSHNAVENMRRLAEWAANLSSPGALEFFSIPCSYPVNSGPLKVMQYMDLGMIAETAEGAGIDFRVLYLRRSAKEVVIANTVHRKFHLLMGDDEETVGQERLFLKYMRVLFTDIAVLHSFLGEIGPEFVVCHDWDRLGDKEQASTIASFISPNDEIASLVESSLVQT-AKKSSRTDPLPFEDAYAVVLRLQRKLDAFEHLYCG 407
BLAST of mRNA_F-serratus_M_contig9.20352.1 vs. uniprot
Match: D7FMV4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMV4_ECTSI) HSP 1 Score: 132 bits (333), Expect = 1.450e-32 Identity = 86/242 (35.54%), Postives = 122/242 (50.41%), Query Frame = 1
Query: 7 IVSKTVVSPNLRMSVLVGLEGSGHHYLGQAVSDMFNSNDEISETTTPCIDIGAYYTKISMESSPYAYSCLCKHAREDMQNLALREQSLPWPGHLTHL----CSEQ-----SYPSGNGANKVVHYVDLRMLVEIAEEEGVDLRVVYLKRSAHDLLVANTVHRGFQETIGLDVNTTASDQRFTEYSLILLTNAAVVHSFLSEIDPAFVVCHDFAHAGEEEQAATVSNFVAPNSVMAEMFKTSLL 705
+V K VS +R+ LVGLEG+GHHY+ + D+ D++ C+ Y ++S+ S AY K RE+M+ LA + G T + C Q SYP+ NG K + YVD R++ E AE GVD+R VYL RSA D+L +++ H + + F S ILL N AVVHS E+DP+F C + + QAA V+ F+APN+ AE +L
Sbjct: 98 VVEKKAVSSRMRVVFLVGLEGTGHHYMADVLEDVCKK-DKV-RCPKLCVMAKVLYPELSLPKSRNAYWDARKRLREEMEKLAAFPEESLAEGESTVVSFGACRFQGTGMMSYPNFNGDEKALQYVDFRLVAEEAERAGVDMRFVYLARSAADILTSDSGHHNYGGS-------------FIRESRILLNNLAVVHSTFQELDPSFTTCFRYGEMADPAQAARVAGFLAPNNHTAEKLADQIL 324
BLAST of mRNA_F-serratus_M_contig9.20352.1 vs. uniprot
Match: D7FZI1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZI1_ECTSI) HSP 1 Score: 117 bits (293), Expect = 1.900e-29 Identity = 56/114 (49.12%), Postives = 81/114 (71.05%), Query Frame = 1
Query: 478 IGLDVNTTASDQRFTEYSLILLTNAAVVHSFLSEIDPAFVVCHDFAHAGEEEQAATVSNFVAPNSVMAEMFKTSLLRAWTEHSSQWEELSFDGAEAVASRLQQKLDAFEPLYCG 819
+G D T ++ F EY +L T+ AV+ SFLSEI P F+VCHD+ G++EQA+T+++F+APN +A + ++SL++ + SS L F+ A+AV SRLQ+KLDAFEPLYCG
Sbjct: 1 MGGDEETVGEERLFLEYMRVLFTDIAVLQSFLSEIGPEFIVCHDWDRLGDKEQASTIAHFIAPNDEIAGLVESSLVQTARKKSSNTNPLPFEDADAVVSRLQRKLDAFEPLYCG 114
BLAST of mRNA_F-serratus_M_contig9.20352.1 vs. uniprot
Match: A0A6H5KIA1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIA1_9PHAE) HSP 1 Score: 115 bits (288), Expect = 4.910e-27 Identity = 85/249 (34.14%), Postives = 118/249 (47.39%), Query Frame = 1
Query: 148 CIDIGAYYTKISMESSPYAYSCLCKHAREDMQNLALREQSLPWPGHLTHL----CSEQ-----SYPSGNGANKVVHYVDLRMLVEIAEEEGVDLRVVYLKRSAHDLLVANTVHRGFQETIGLDVNTTASDQRFTEYSLILLTNAAVVHSFLSEIDPAFVVCHDFAHAGEEEQAATVSNFVAPNSVMAEMFKTSLL--------------RAWTEHSSQW---EELSFDGAEAVASRLQQKLDAFEPLYC 816
C+ Y ++S+ S AY K RE+M+ LA + G T + C Q SYP+ NG K + YVD R++ E AE GVD+R VYL RSA D+L +++VH + + F S ILL N AVVHS E+DPAF C + + QAA V+ F+APN+ AE +L ++W E + E++ A AV +RLQQ+LD E C
Sbjct: 20 CVMAKVLYPELSLPESRNAYWDARKRLREEMEKLAAFPEESLAEGESTVVSFGACRFQGTGMMSYPNFNGDEKALQYVDFRLVAEEAERAGVDMRFVYLARSAADILTSDSVHHNYGGS-------------FIRESRILLNNLAVVHSTFQELDPAFTTCFRYGEMADPAQAARVAGFLAPNNRTAEKLADQMLSHVKIKSPPESGNKQSWGEGGKRLRHPEDVDPPKA-AVVTRLQQRLDMVEKDVC 254
BLAST of mRNA_F-serratus_M_contig9.20352.1 vs. uniprot
Match: D7G1E6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1E6_ECTSI) HSP 1 Score: 110 bits (275), Expect = 1.760e-26 Identity = 59/138 (42.75%), Postives = 90/138 (65.22%), Query Frame = 1
Query: 106 MFNSNDEISETTTPCIDIGAYYTKISMESSPYAYSCLCKHAREDMQNLALREQSLPWPGHLTHLCSEQSYPSGNGANKVVHYVDLRMLVEIAEEEGVDLRVVYLKRSAHDLLVANTVHRGFQETIGLDVNTTASDQRF 519
MF ++ ++ + ++ +M +S A++ + R+ M++LA R Q+LP PG + + SYP GNG KV YVDLR+L E AE EGVDLRV+Y+KRSA +LL+A+TVHRGFQ +G D++++A ++RF
Sbjct: 1 MFKAHPDLVRFDEKLPNFWKFFISTTMRTSSTAFTASWQQGRDQMRDLAQRAQTLPTPGTVQLITGGISYPCGNGPQKVQQYVDLRLLAEAAEAEGVDLRVLYMKRSAKELLLADTVHRGFQNFLG-DIDSSA-EKRF 136
BLAST of mRNA_F-serratus_M_contig9.20352.1 vs. uniprot
Match: D7FMV3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FMV3_ECTSI) HSP 1 Score: 115 bits (287), Expect = 1.000e-25 Identity = 79/245 (32.24%), Postives = 115/245 (46.94%), Query Frame = 1
Query: 7 IVSKTVVSPNLRMSVLVGLEGSGHHYLGQAVSDMFNSNDEISETTTPCIDI----GAYYTKISMESSPYAYSCLCKHAREDMQNLALREQSLPWPGHLTHL----CSEQS----YPSGNGANKVVHYVDLRMLVEIAEEEGVDLRVVYLKRSAHDLLVANTVHRGFQETIGLDVNTTASDQRFTEYSLILLTNAAVVHSFLSEIDPAFVVCHDFAHAGEEEQAATVSNFVAPNSVMAEMFKTSLL 705
+V K VS LR+ LVGLEG+GHHY ++F+ D + PC + A Y ++ S+ Y + R +++NLA G C +S +P+ NG +K + YVD R+L E AE GVD+R VYL RSA +LV++T H + T F S L+ NAAVV S E+ P F C + + EQ V+ F+AP+ A+ + +L
Sbjct: 57 VVEKKTVSSQLRVMFLVGLEGTGHHYF----LNVFD--DACTTAAVPCANACPIAKALYPSLATPSTKQDYERARRELRRELENLAAYPAEFMTEGQAAIAQFVTCRSKSGMMSFPNFNGNDKALQYVDFRLLAEEAERAGVDVRFVYLARSARSILVSDTQHNHYGGT-------------FMRESRALINNAAVVESTFQELGPGFATCFRYESMSDPEQTHRVARFIAPDEDTAQRLEGKML 282
BLAST of mRNA_F-serratus_M_contig9.20352.1 vs. uniprot
Match: A0A7S2GH68_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GH68_9STRA) HSP 1 Score: 65.9 bits (159), Expect = 2.280e-9 Identity = 39/105 (37.14%), Postives = 60/105 (57.14%), Query Frame = 1
Query: 310 SYPSGNGANKVVHYVDLRMLVEIAEEEGVDLRVVYLKRSAHDLLVANTVHRGFQETIGLDVNTTASDQRFTEYSLILLTNAAVVHSFLSEIDPAFVVCHDFAHAG 624
SYP+ G +K +H ++ L +AEE GVDLR++ L+R AH+L+V+ T HR F + + TE + +L NAA + + L IDP F +C D++ G
Sbjct: 33 SYPNFGGYDKALHRPNIHQLAMLAEEAGVDLRILVLQRPAHELMVSTTKHRKF-------------NSKPTEMA-VLGDNAAGLAAQLQLIDPRFFLCVDYSSMG 123
BLAST of mRNA_F-serratus_M_contig9.20352.1 vs. uniprot
Match: A0A7S0A0K6_9DINO (Hypothetical protein (Fragment) n=1 Tax=Pyrodinium bahamense TaxID=73915 RepID=A0A7S0A0K6_9DINO) HSP 1 Score: 64.3 bits (155), Expect = 4.930e-8 Identity = 64/223 (28.70%), Postives = 100/223 (44.84%), Query Frame = 1
Query: 7 IVSKTVVSPNLRMSVLVGLEGSGHHY----LGQAVSDMFNSND-EISE---TTTPCIDIGAYYTKI-------SMESSPYAYSCLCKHARED------MQNLALREQSLPWPGHLTHLCSEQSYPSGNGANKVVHYVDLRMLVEIAEEEGVDLRVVYLKRSAHDLLVANTVHRGFQETIGLDVNTTASDQRFTEYSLILLTNAAVVHSFLSEIDPAFVVCHDF 612
++ K V R+ + GLEGSGHH L + V + D E+ T + ++ TK+ E +P L R + ++ L+ R + P L C SYP+ G K+ D+R+L E+AE+EGVD R++ L R A +L + T+HR F NT A ++L NA + + L +DPAFV+C ++
Sbjct: 98 LLPKRVHGARWRLLFVAGLEGSGHHLWIPLLKRCVKARRCAADVELGRRLWTDRTRKGLWSFETKLYAPRAAKKWEYAPPGAKWLSGFRRAEGEVRTALRRLSRRNATSPLLASLGG-CGMMSYPNFPGKLKMFQTPDVRLLAELAEDEGVDFRILVLHRPAAAVLRSTTIHRHFGSW-----NTEA---------VVLEHNAQTLLAQLQSLDPAFVLCTEY 305
BLAST of mRNA_F-serratus_M_contig9.20352.1 vs. uniprot
Match: A0A7S2DFF0_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DFF0_9STRA) HSP 1 Score: 58.5 bits (140), Expect = 2.550e-7 Identity = 36/95 (37.89%), Postives = 54/95 (56.84%), Query Frame = 1
Query: 310 SYPSGNGANKVVHYVDLRMLVEIAEEEGVDLRVVYLKRSAHDLLVANTVHRGFQETIGLDVNTTASDQRFTEYSLILLTNAAVVHSFLSEIDPAF 594
SYP+ G +K +H ++ L +AEE GVDLR++ L+R AH+L+V+ T HR F + + TE + +L NAA + + L IDP F
Sbjct: 33 SYPNFGGYDKALHRPNIHQLAMLAEEAGVDLRILVLQRPAHELMVSTTKHRKF-------------NSKPTEMA-VLGDNAAGLAAQLQVIDPRF 113
BLAST of mRNA_F-serratus_M_contig9.20352.1 vs. uniprot
Match: A0A7S3W283_9SPIT (Hypothetical protein (Fragment) n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3W283_9SPIT) HSP 1 Score: 60.5 bits (145), Expect = 3.990e-7 Identity = 48/165 (29.09%), Postives = 76/165 (46.06%), Query Frame = 1
Query: 10 VSKTVVSPNLRMSVLVGLEGSGHH-YLGQAVSDMFNSN--DEISETTTPCIDIGAYYTKISMESSPYAYSCLCKHAREDMQNLALREQSLPWPGHL----THLCSEQSYPSGNGANKVVHYVDLRMLVEIAEEEGVDLRVVYLKRSAHDLLVANTVHRGFQETIG 483
V K S +R + GLEG+GHH + SN S+T + I + K M S + ++ ++ L + +++ P L L + SYP G + +H+ DLR+L E+AE GVDLRV+ R A D+L++ +H F+ G
Sbjct: 63 VRKQQFSNTVRFVFVAGLEGTGHHLWHAMLAGSCARSNLCANASDTLSDLIADKLHRKKSIMFSERASGRDAQLVEQKLVERLKIAARTVTSPTSLIIQNNALGGQMSYPDSVGTDVQMHHPDLRLLAELAEIAGVDLRVLLSMRGATDVLISTMIHHPFRNQKG 227 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig9.20352.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig9.20352.1 >prot_F-serratus_M_contig9.20352.1 ID=prot_F-serratus_M_contig9.20352.1|Name=mRNA_F-serratus_M_contig9.20352.1|organism=Fucus serratus male|type=polypeptide|length=260bp MSVLVGLEGSGHHYLGQAVSDMFNSNDEISETTTPCIDIGAYYTKISMESback to top mRNA from alignment at F-serratus_M_contig9:557085..558484+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig9.20352.1 ID=mRNA_F-serratus_M_contig9.20352.1|Name=mRNA_F-serratus_M_contig9.20352.1|organism=Fucus serratus male|type=mRNA|length=1400bp|location=Sequence derived from alignment at F-serratus_M_contig9:557085..558484+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig9:557085..558484+ >mRNA_F-serratus_M_contig9.20352.1 ID=mRNA_F-serratus_M_contig9.20352.1|Name=mRNA_F-serratus_M_contig9.20352.1|organism=Fucus serratus male|type=CDS|length=1560bp|location=Sequence derived from alignment at F-serratus_M_contig9:557085..558484+ (Fucus serratus male)back to top |