mRNA_F-serratus_M_contig895.20305.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig895.20305.1
Unique NamemRNA_F-serratus_M_contig895.20305.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig895.20305.1 vs. uniprot
Match: D8LDX4_ECTSI (Fumarate hydratase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDX4_ECTSI)

HSP 1 Score: 428 bits (1101), Expect = 9.610e-146
Identity = 212/262 (80.92%), Postives = 238/262 (90.84%), Query Frame = 1
Query:    4 SMATATRTESDAFGDIDVDSSKYWGAQTERSLMNFPIGGVESRMPIEIIKGFGVLKKCAAKYSMSTGKLDQSVGEAIVEAADEVIQGKLDGNFPLVVFQTGSGTQTNMNCNEVISNR--QLLGGVMGTKKPVHPNDHVNMGQSSNDSFPTAMHIAAVLQAHGVLLPGLRKLHQALSAKAAEWKDVIKIGRTHTQDATPLTLGQEFGGYAAQVEYSIERVEASLGSLHRLALGGTAVGTGLNTVKGYDEKIAALISEETGQPF 783
            S + + RTESDAFG+I V+ ++YWGAQT+RSLMNFPIGG ESRMPIE+I+GFGVLKKC A YSMS GKL++ VGEAIVEAADEVI+GKLD +FPLVVFQTGSGTQTNMNCNEVISNR  ++LGGV G+KKPVHPNDHVNMGQSSNDSFPTAMHIAA++QAHGVLLPGLR+LH AL+AKA EW+ VIKIGRTHTQDATPLTLGQEFGGYAAQVEY I+RVE +L SL+RLALGGTAVGTGLNT  GYDE+IAALI+EET  PF
Sbjct:   14 SASPSVRTESDAFGEIAVEDTRYWGAQTQRSLMNFPIGGRESRMPIEVIQGFGVLKKCCALYSMSKGKLNKDVGEAIVEAADEVIRGKLDDHFPLVVFQTGSGTQTNMNCNEVISNRAIEILGGVKGSKKPVHPNDHVNMGQSSNDSFPTAMHIAAIMQAHGVLLPGLRELHDALTAKAKEWEKVIKIGRTHTQDATPLTLGQEFGGYAAQVEYGIKRVENTLPSLYRLALGGTAVGTGLNTAMGYDEEIAALIAEETNLPF 275          
BLAST of mRNA_F-serratus_M_contig895.20305.1 vs. uniprot
Match: A0A835YLQ6_9STRA (Fumarate hydratase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLQ6_9STRA)

HSP 1 Score: 398 bits (1022), Expect = 1.300e-133
Identity = 195/260 (75.00%), Postives = 225/260 (86.54%), Query Frame = 1
Query:   10 ATATRTESDAFGDIDVDSSKYWGAQTERSLMNFPIGGVESRMPIEIIKGFGVLKKCAAKYSMSTGKLDQSVGEAIVEAADEVIQGKLDGNFPLVVFQTGSGTQTNMNCNEVISNR--QLLGGVMGTKKPVHPNDHVNMGQSSNDSFPTAMHIAAVLQAHGVLLPGLRKLHQALSAKAAEWKDVIKIGRTHTQDATPLTLGQEFGGYAAQVEYSIERVEASLGSLHRLALGGTAVGTGLNTVKGYDEKIAALISEETGQPF 783
            +TA R ESDAFG I+V+ S+YWGAQT+RSL NFPIGG ES+MP+E+IKGFGVLKKCAA+Y+MS GKLD+ +G+AIV+A DEV+ GK D +FPLVVFQTGSGTQTNMN NEV+SNR  ++LGG +G+K PVHPNDHVNMGQSSNDSFPTAMHIAAV QAH V LPGLR LH AL AKA E+ D+IKIGRTHTQDATPLTLGQEF GYA QV YSI RVE +L +L+RLALGGTAVGTGL T +GYD++IAALI+ ETG PF
Sbjct:   26 STADRQESDAFGPIEVEDSRYWGAQTQRSLQNFPIGGPESKMPLEVIKGFGVLKKCAAQYNMSVGKLDRKLGDAIVQACDEVLAGKFDDHFPLVVFQTGSGTQTNMNVNEVVSNRAIEILGGALGSKTPVHPNDHVNMGQSSNDSFPTAMHIAAVAQAHAVTLPGLRHLHAALDAKAREFADIIKIGRTHTQDATPLTLGQEFSGYAQQVAYSISRVENALPALYRLALGGTAVGTGLTTSEGYDKEIAALIAGETGHPF 285          
BLAST of mRNA_F-serratus_M_contig895.20305.1 vs. uniprot
Match: A0A836CH65_9STRA (Fumarate hydratase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CH65_9STRA)

HSP 1 Score: 382 bits (980), Expect = 1.280e-127
Identity = 188/258 (72.87%), Postives = 219/258 (84.88%), Query Frame = 1
Query:   16 ATRTESDAFGDIDVDSSKYWGAQTERSLMNFPIGGVESRMPIEIIKGFGVLKKCAAKYSMSTGKLDQSVGEAIVEAADEVIQGKLDGNFPLVVFQTGSGTQTNMNCNEVISNR--QLLGGVMGTKKPVHPNDHVNMGQSSNDSFPTAMHIAAVLQAHGVLLPGLRKLHQALSAKAAEWKDVIKIGRTHTQDATPLTLGQEFGGYAAQVEYSIERVEASLGSLHRLALGGTAVGTGLNTVKGYDEKIAALISEETGQPF 783
            ATRTESDAFG I+V+SS+YWGAQT+RSL NFPIGG ES+MP+EI+K FGVLKKCAA+Y+M  GKLD  +G A+  A DE++ GK D +FPLV+FQTGSGTQTNMN NEVISNR  ++LGG +G+K PVHPNDHVNMGQSSNDSFPTAMHIAAV QA  V LPGL+ LH AL+AKA  +K++IKIGRTHTQDATP+TLGQEF GYA QV Y I RVEA L +L RLALGGTAVGTGL+T +GYD +IAALI++ETG PF
Sbjct:    2 ATRTESDAFGPIEVESSRYWGAQTQRSLQNFPIGGPESKMPLEIVKAFGVLKKCAAQYNMQQGKLDAKLGGALTAACDEILAGKFDDHFPLVIFQTGSGTQTNMNVNEVISNRAIEMLGGALGSKTPVHPNDHVNMGQSSNDSFPTAMHIAAVTQAMTVTLPGLKHLHAALAAKAEAFKNIIKIGRTHTQDATPMTLGQEFSGYAQQVAYGIARVEACLPALLRLALGGTAVGTGLSTTEGYDVEIAALIAKETGYPF 259          
BLAST of mRNA_F-serratus_M_contig895.20305.1 vs. uniprot
Match: A0A2D4BP08_PYTIN (Fumarate hydratase n=2 Tax=Pythium TaxID=4797 RepID=A0A2D4BP08_PYTIN)

HSP 1 Score: 379 bits (973), Expect = 1.840e-126
Identity = 184/260 (70.77%), Postives = 220/260 (84.62%), Query Frame = 1
Query:   10 ATATRTESDAFGDIDVDSSKYWGAQTERSLMNFPIGGVESRMPIEIIKGFGVLKKCAAKYSMSTGKLDQSVGEAIVEAADEVIQGKLDGNFPLVVFQTGSGTQTNMNCNEVISNRQL--LGGVMGTKKPVHPNDHVNMGQSSNDSFPTAMHIAAVLQAHGVLLPGLRKLHQALSAKAAEWKDVIKIGRTHTQDATPLTLGQEFGGYAAQVEYSIERVEASLGSLHRLALGGTAVGTGLNTVKGYDEKIAALISEETGQPF 783
            A++ R ESD+ G+I+VD+SKYWGAQT+RSL NFPIGG   RMP+ +IK FGV+KKCAAKY++  GKLD  + + IV+AAD+VIQGKLD +FPLVVFQTGSGTQ+NMN NEVI+NR +   GG +G+K PVHPNDHVNMGQSSNDSFPTAMHIAAV++ H VLLPGLRKLH AL AK  E+ D+IKIGRTHTQDATPLTLGQEF GY  Q+  SI+RVE  L +L++LALGGTAVGTGLNT KGYD++IAA+I++ETG PF
Sbjct:   11 ASSFRVESDSIGEINVDASKYWGAQTQRSLQNFPIGGPRERMPLPVIKAFGVVKKCAAKYNLQKGKLDAKIADVIVKAADDVIQGKLDEHFPLVVFQTGSGTQSNMNTNEVIANRAIEYAGGELGSKSPVHPNDHVNMGQSSNDSFPTAMHIAAVMEIHEVLLPGLRKLHDALDAKVKEFDDIIKIGRTHTQDATPLTLGQEFSGYREQIALSIKRVEDVLPNLYKLALGGTAVGTGLNTSKGYDKEIAAIIAQETGYPF 270          
BLAST of mRNA_F-serratus_M_contig895.20305.1 vs. uniprot
Match: T0RV02_SAPDV (Fumarate hydratase n=2 Tax=Saprolegniaceae TaxID=4764 RepID=T0RV02_SAPDV)

HSP 1 Score: 377 bits (968), Expect = 1.390e-125
Identity = 182/260 (70.00%), Postives = 219/260 (84.23%), Query Frame = 1
Query:   10 ATATRTESDAFGDIDVDSSKYWGAQTERSLMNFPIGGVESRMPIEIIKGFGVLKKCAAKYSMSTGKLDQSVGEAIVEAADEVIQGKLDGNFPLVVFQTGSGTQTNMNCNEVISNRQL--LGGVMGTKKPVHPNDHVNMGQSSNDSFPTAMHIAAVLQAHGVLLPGLRKLHQALSAKAAEWKDVIKIGRTHTQDATPLTLGQEFGGYAAQVEYSIERVEASLGSLHRLALGGTAVGTGLNTVKGYDEKIAALISEETGQPF 783
            A++ R+E+D+ G +DVD+SKYWGAQT+RSL NFPIGG   RMP+ +IK  G++KKCAAKY++  GKLD +V E I++AAD+VI GKLD +FPLVVFQTGSGTQ+NMN NEVISNR +  +GG +G+KKPVHPNDHVNMGQSSNDSFPTAMHIAAV++ H VLLPGL KLH AL  K  E+  +IKIGRTHTQDATPLTLGQEF GY  Q+ YSI+RVEA L +L++LALGGTAVGTGLNT KGYD++IAA+I+ ETG PF
Sbjct:   20 ASSVRSETDSIGAVDVDASKYWGAQTQRSLQNFPIGGGRERMPMPVIKAMGIVKKCAAKYNLKLGKLDAAVAENIIKAADDVISGKLDDHFPLVVFQTGSGTQSNMNTNEVISNRAIEYMGGELGSKKPVHPNDHVNMGQSSNDSFPTAMHIAAVMEIHRVLLPGLHKLHDALDVKVKEFDGIIKIGRTHTQDATPLTLGQEFSGYREQIAYSIKRVEAVLPNLYKLALGGTAVGTGLNTTKGYDKEIAAIIAAETGFPF 279          
BLAST of mRNA_F-serratus_M_contig895.20305.1 vs. uniprot
Match: A0A5D6XXM5_9STRA (Fumarate hydratase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XXM5_9STRA)

HSP 1 Score: 374 bits (959), Expect = 4.240e-124
Identity = 184/260 (70.77%), Postives = 216/260 (83.08%), Query Frame = 1
Query:   10 ATATRTESDAFGDIDVDSSKYWGAQTERSLMNFPIGGVESRMPIEIIKGFGVLKKCAAKYSMSTGKLDQSVGEAIVEAADEVIQGKLDGNFPLVVFQTGSGTQTNMNCNEVISNRQL--LGGVMGTKKPVHPNDHVNMGQSSNDSFPTAMHIAAVLQAHGVLLPGLRKLHQALSAKAAEWKDVIKIGRTHTQDATPLTLGQEFGGYAAQVEYSIERVEASLGSLHRLALGGTAVGTGLNTVKGYDEKIAALISEETGQPF 783
            +++ R ESD+ G+I+VDSSKYWGAQT+RSL NFPIGG   RMP+ +IK FGV+KKCAAKY++  GKLD ++ E I+ AAD+VI GKLD +FPLVVFQTGSGTQ+NMN NEVISNR +   GG +G+K PVHPNDHVNMGQSSNDSFPTAMHIAAV + H VLLPGLRKLH AL AK  E+ D+IKIGRTHTQDATPLTLGQEF GY  Q+  SI RVEA L +L++LALGGTAVGTGLNT  GYD +IAA+I++ETG PF
Sbjct:   29 SSSVRVESDSIGEIEVDSSKYWGAQTQRSLENFPIGGERERMPLPVIKAFGVVKKCAAKYNVQKGKLDPALAEHIIRAADDVIAGKLDAHFPLVVFQTGSGTQSNMNTNEVISNRAIEYSGGALGSKHPVHPNDHVNMGQSSNDSFPTAMHIAAVQEIHRVLLPGLRKLHAALDAKVREFDDIIKIGRTHTQDATPLTLGQEFSGYREQIALSIARVEAVLPNLYKLALGGTAVGTGLNTSVGYDAEIAAIIADETGLPF 288          
BLAST of mRNA_F-serratus_M_contig895.20305.1 vs. uniprot
Match: A0A024GCI2_9STRA (Fumarate hydratase n=2 Tax=Albugo TaxID=65356 RepID=A0A024GCI2_9STRA)

HSP 1 Score: 371 bits (953), Expect = 1.410e-123
Identity = 182/259 (70.27%), Postives = 212/259 (81.85%), Query Frame = 1
Query:   13 TATRTESDAFGDIDVDSSKYWGAQTERSLMNFPIGGVESRMPIEIIKGFGVLKKCAAKYSMSTGKLDQSVGEAIVEAADEVIQGKLDGNFPLVVFQTGSGTQTNMNCNEVISNRQL--LGGVMGTKKPVHPNDHVNMGQSSNDSFPTAMHIAAVLQAHGVLLPGLRKLHQALSAKAAEWKDVIKIGRTHTQDATPLTLGQEFGGYAAQVEYSIERVEASLGSLHRLALGGTAVGTGLNTVKGYDEKIAALISEETGQPF 783
            +A R+ESD+ G I VD+SKYWGAQT+RS+ NFPIGG   RMP+ +IK FGV+KKC AKY+MS GKLDQS+G +I+ AAD+VI GKL+  FPLVVFQTGSGTQTNMN NEVISNR +   GG MG+K PVHPNDHVNMGQSSNDSFP AMH+AAV + H +LLPGLRKLH AL  K  E++D+IKIGRTHTQDATP+TLGQEF GY  Q+  SI+R EASL +L++LALGGTAVGTGLNT KGYD +IA  I EET  PF
Sbjct:    2 SAYRSESDSIGTIQVDASKYWGAQTQRSIQNFPIGGERERMPLPVIKAFGVIKKCTAKYNMSKGKLDQSIGNSIIRAADDVINGKLNEQFPLVVFQTGSGTQTNMNVNEVISNRAIEYCGGEMGSKVPVHPNDHVNMGQSSNDSFPAAMHVAAVQEIHRILLPGLRKLHDALDNKVKEFQDIIKIGRTHTQDATPMTLGQEFSGYREQIALSIQRAEASLTNLYKLALGGTAVGTGLNTSKGYDVEIAKYIVEETELPF 260          
BLAST of mRNA_F-serratus_M_contig895.20305.1 vs. uniprot
Match: A0A485LLZ0_9STRA (Fumarate hydratase n=8 Tax=Saprolegniaceae TaxID=4764 RepID=A0A485LLZ0_9STRA)

HSP 1 Score: 372 bits (954), Expect = 1.940e-123
Identity = 179/263 (68.06%), Postives = 218/263 (82.89%), Query Frame = 1
Query:    1 MSMATATRTESDAFGDIDVDSSKYWGAQTERSLMNFPIGGVESRMPIEIIKGFGVLKKCAAKYSMSTGKLDQSVGEAIVEAADEVIQGKLDGNFPLVVFQTGSGTQTNMNCNEVISNR--QLLGGVMGTKKPVHPNDHVNMGQSSNDSFPTAMHIAAVLQAHGVLLPGLRKLHQALSAKAAEWKDVIKIGRTHTQDATPLTLGQEFGGYAAQVEYSIERVEASLGSLHRLALGGTAVGTGLNTVKGYDEKIAALISEETGQPF 783
            MS  T  R E+D+ G++ VD+SKYWGAQT+RSL NFPIGG   RMP+ +IK  G++KKCAAKY++  GKLD+ +   I++AAD+VI GKLD +FPLVVFQTGSGTQ+NMN NEVISNR  + +GG +G+KKPVHPNDHVNMGQSSNDSFPTAMHIAAV++ H VLLPGL+KLH AL AK  E+  +IKIGRTHTQDATP+TLGQEF GY  Q+ YSI+RVE  L +L++LALGGTAVGTGLNT KGYD++IAA+I++ET  PF
Sbjct:   19 MSSTTTIRVETDSLGEVSVDASKYWGAQTQRSLENFPIGGNRERMPMPVIKAMGIVKKCAAKYNVKLGKLDKEIAANIIKAADDVIAGKLDDHFPLVVFQTGSGTQSNMNTNEVISNRAIEFMGGKLGSKKPVHPNDHVNMGQSSNDSFPTAMHIAAVMEIHRVLLPGLKKLHAALDAKVQEFDGIIKIGRTHTQDATPMTLGQEFSGYREQIAYSIKRVEDVLPNLYKLALGGTAVGTGLNTTKGYDKEIAAIIADETKLPF 281          
BLAST of mRNA_F-serratus_M_contig895.20305.1 vs. uniprot
Match: W2Q158_PHYPN (Fumarate hydratase n=23 Tax=Peronosporaceae TaxID=4777 RepID=W2Q158_PHYPN)

HSP 1 Score: 369 bits (946), Expect = 1.150e-121
Identity = 182/260 (70.00%), Postives = 213/260 (81.92%), Query Frame = 1
Query:   10 ATATRTESDAFGDIDVDSSKYWGAQTERSLMNFPIGGVESRMPIEIIKGFGVLKKCAAKYSMSTGKLDQSVGEAIVEAADEVIQGKLDGNFPLVVFQTGSGTQTNMNCNEVISNR--QLLGGVMGTKKPVHPNDHVNMGQSSNDSFPTAMHIAAVLQAHGVLLPGLRKLHQALSAKAAEWKDVIKIGRTHTQDATPLTLGQEFGGYAAQVEYSIERVEASLGSLHRLALGGTAVGTGLNTVKGYDEKIAALISEETGQPF 783
            A++ R E+D+ G++ VD SKYWGAQT+RSL NFPIGG   RMP+ +IK FGV+KKCAAKY++  GKLD +V + I+ AAD+VI GKLD +FPLVVFQTGSGTQ+NMN NEVISNR  +L GGV+G+K PVHPNDHVNMGQSSNDSFPTAMHIAAV + H VLLPGL KLH AL AK  E+ D+IKIGRTHTQDATPLTLGQEF GY  Q+  SIERVE  L +L +LALGGTAVGTGLNT KGYD +IA +I++ET  PF
Sbjct:   64 ASSFRVETDSIGEVKVDDSKYWGAQTQRSLENFPIGGARERMPMPVIKAFGVVKKCAAKYNLQQGKLDAAVADKIIAAADDVIAGKLDDHFPLVVFQTGSGTQSNMNTNEVISNRAIELAGGVLGSKTPVHPNDHVNMGQSSNDSFPTAMHIAAVQEIHRVLLPGLHKLHDALDAKVKEFDDIIKIGRTHTQDATPLTLGQEFSGYREQIALSIERVERVLPNLCKLALGGTAVGTGLNTSKGYDAEIAKIIADETKLPF 323          
BLAST of mRNA_F-serratus_M_contig895.20305.1 vs. uniprot
Match: A0A3R7A9J8_9STRA (Fumarate hydratase n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A3R7A9J8_9STRA)

HSP 1 Score: 378 bits (970), Expect = 2.050e-119
Identity = 182/263 (69.20%), Postives = 221/263 (84.03%), Query Frame = 1
Query:    1 MSMATATRTESDAFGDIDVDSSKYWGAQTERSLMNFPIGGVESRMPIEIIKGFGVLKKCAAKYSMSTGKLDQSVGEAIVEAADEVIQGKLDGNFPLVVFQTGSGTQTNMNCNEVISNR--QLLGGVMGTKKPVHPNDHVNMGQSSNDSFPTAMHIAAVLQAHGVLLPGLRKLHQALSAKAAEWKDVIKIGRTHTQDATPLTLGQEFGGYAAQVEYSIERVEASLGSLHRLALGGTAVGTGLNTVKGYDEKIAALISEETGQPF 783
            +S A   R E+D+ G ++VD+SKYWGAQT+RSL NFPIGG   RMP+ +IK  G++KKCAAKY++  GKLD+++ E I++AAD+VI GKLD +FPLVVFQTGSGTQ+NMN NEVISNR  + +GG +G+K PVHPNDHVNMGQSSNDSFPTAMHIAAV++ H VLLPGLRKLH AL AK AE+  +IKIGRTHTQDATP+TLGQEF GY  Q+ YSI+RVEA L +L++LALGGTAVGTGLNT KGYD++IAA+I+EET  PF
Sbjct:  607 LSSAAGVRVETDSLGKVEVDASKYWGAQTQRSLENFPIGGNRERMPMPVIKAMGIVKKCAAKYNLKLGKLDKAIAENIIKAADDVINGKLDDHFPLVVFQTGSGTQSNMNTNEVISNRAIEFMGGELGSKTPVHPNDHVNMGQSSNDSFPTAMHIAAVMEIHRVLLPGLRKLHAALDAKVAEFDGIIKIGRTHTQDATPMTLGQEFSGYREQIAYSIQRVEAVLPNLYKLALGGTAVGTGLNTTKGYDKEIAAIIAEETKFPF 869          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig895.20305.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LDX4_ECTSI9.610e-14680.92Fumarate hydratase n=1 Tax=Ectocarpus siliculosus ... [more]
A0A835YLQ6_9STRA1.300e-13375.00Fumarate hydratase n=1 Tax=Tribonema minus TaxID=3... [more]
A0A836CH65_9STRA1.280e-12772.87Fumarate hydratase n=1 Tax=Tribonema minus TaxID=3... [more]
A0A2D4BP08_PYTIN1.840e-12670.77Fumarate hydratase n=2 Tax=Pythium TaxID=4797 RepI... [more]
T0RV02_SAPDV1.390e-12570.00Fumarate hydratase n=2 Tax=Saprolegniaceae TaxID=4... [more]
A0A5D6XXM5_9STRA4.240e-12470.77Fumarate hydratase n=1 Tax=Pythium brassicum TaxID... [more]
A0A024GCI2_9STRA1.410e-12370.27Fumarate hydratase n=2 Tax=Albugo TaxID=65356 RepI... [more]
A0A485LLZ0_9STRA1.940e-12368.06Fumarate hydratase n=8 Tax=Saprolegniaceae TaxID=4... [more]
W2Q158_PHYPN1.150e-12170.00Fumarate hydratase n=23 Tax=Peronosporaceae TaxID=... [more]
A0A3R7A9J8_9STRA2.050e-11969.20Fumarate hydratase n=1 Tax=Aphanomyces invadans Ta... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig895contigF-serratus_M_contig895:14763..28916 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score427.2
Seed ortholog evalue7.1e-117
Seed eggNOG ortholog2880.D8LDX4
KEGG rclassRC00443
KEGG koko:K01679
KEGG ReactionR01082
KEGG Pathwayko00020,ko00620,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko04934,ko05200,ko05211,map00020,map00620,map00720,map01100,map01110,map01120,map01130,map01200,map04934,map05200,map05211
KEGG ModuleM00009,M00011,M00173,M00376
Hectar predicted targeting categoryother localisation
EggNOG free text desc.fumarate hydratase activity
EggNOG OGsCOG0114@1,KOG1317@2759
EC4.2.1.2
COG Functional cat.C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Exons8
Model size984
Cds size984
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig895.20305.1prot_F-serratus_M_contig895.20305.1Fucus serratus malepolypeptideF-serratus_M_contig895 14763..28916 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932602.3948216-CDS-F-serratus_M_contig895:14762..148661622932602.3948216-CDS-F-serratus_M_contig895:14762..14866Fucus serratus maleCDSF-serratus_M_contig895 14763..14866 -
1690964381.3997507-CDS-F-serratus_M_contig895:14762..148661690964381.3997507-CDS-F-serratus_M_contig895:14762..14866Fucus serratus maleCDSF-serratus_M_contig895 14763..14866 -
1622932602.4293776-CDS-F-serratus_M_contig895:15249..154001622932602.4293776-CDS-F-serratus_M_contig895:15249..15400Fucus serratus maleCDSF-serratus_M_contig895 15250..15400 -
1690964381.410662-CDS-F-serratus_M_contig895:15249..154001690964381.410662-CDS-F-serratus_M_contig895:15249..15400Fucus serratus maleCDSF-serratus_M_contig895 15250..15400 -
1622932602.4464636-CDS-F-serratus_M_contig895:16565..166641622932602.4464636-CDS-F-serratus_M_contig895:16565..16664Fucus serratus maleCDSF-serratus_M_contig895 16566..16664 -
1690964381.4188209-CDS-F-serratus_M_contig895:16565..166641690964381.4188209-CDS-F-serratus_M_contig895:16565..16664Fucus serratus maleCDSF-serratus_M_contig895 16566..16664 -
1622932602.4649396-CDS-F-serratus_M_contig895:17567..177231622932602.4649396-CDS-F-serratus_M_contig895:17567..17723Fucus serratus maleCDSF-serratus_M_contig895 17568..17723 -
1690964381.4270456-CDS-F-serratus_M_contig895:17567..177231690964381.4270456-CDS-F-serratus_M_contig895:17567..17723Fucus serratus maleCDSF-serratus_M_contig895 17568..17723 -
1622932602.4832728-CDS-F-serratus_M_contig895:17970..180871622932602.4832728-CDS-F-serratus_M_contig895:17970..18087Fucus serratus maleCDSF-serratus_M_contig895 17971..18087 -
1690964381.4360201-CDS-F-serratus_M_contig895:17970..180871690964381.4360201-CDS-F-serratus_M_contig895:17970..18087Fucus serratus maleCDSF-serratus_M_contig895 17971..18087 -
1622932602.5096-CDS-F-serratus_M_contig895:18430..185351622932602.5096-CDS-F-serratus_M_contig895:18430..18535Fucus serratus maleCDSF-serratus_M_contig895 18431..18535 -
1690964381.4459198-CDS-F-serratus_M_contig895:18430..185351690964381.4459198-CDS-F-serratus_M_contig895:18430..18535Fucus serratus maleCDSF-serratus_M_contig895 18431..18535 -
1622932602.5302055-CDS-F-serratus_M_contig895:19351..194491622932602.5302055-CDS-F-serratus_M_contig895:19351..19449Fucus serratus maleCDSF-serratus_M_contig895 19352..19449 -
1690964381.4563818-CDS-F-serratus_M_contig895:19351..194491690964381.4563818-CDS-F-serratus_M_contig895:19351..19449Fucus serratus maleCDSF-serratus_M_contig895 19352..19449 -
1622932602.5458026-CDS-F-serratus_M_contig895:28762..289161622932602.5458026-CDS-F-serratus_M_contig895:28762..28916Fucus serratus maleCDSF-serratus_M_contig895 28763..28916 -
1690964381.4670734-CDS-F-serratus_M_contig895:28762..289161690964381.4670734-CDS-F-serratus_M_contig895:28762..28916Fucus serratus maleCDSF-serratus_M_contig895 28763..28916 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig895.20305.1

>prot_F-serratus_M_contig895.20305.1 ID=prot_F-serratus_M_contig895.20305.1|Name=mRNA_F-serratus_M_contig895.20305.1|organism=Fucus serratus male|type=polypeptide|length=328bp
MSMATATRTESDAFGDIDVDSSKYWGAQTERSLMNFPIGGVESRMPIEII
KGFGVLKKCAAKYSMSTGKLDQSVGEAIVEAADEVIQGKLDGNFPLVVFQ
TGSGTQTNMNCNEVISNRQLLGGVMGTKKPVHPNDHVNMGQSSNDSFPTA
MHIAAVLQAHGVLLPGLRKLHQALSAKAAEWKDVIKIGRTHTQDATPLTL
GQEFGGYAAQVEYSIERVEASLGSLHRLALGGTAVGTGLNTVKGYDEKIA
ALISEETGQPFRDRAQQVRGPRGARLDRGGQRRPQHCGVLVDEDRQRRSL
PRVRAALWPGRAQPSRERTRRDEEGGNT
back to top

mRNA from alignment at F-serratus_M_contig895:14763..28916-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig895.20305.1 ID=mRNA_F-serratus_M_contig895.20305.1|Name=mRNA_F-serratus_M_contig895.20305.1|organism=Fucus serratus male|type=mRNA|length=14154bp|location=Sequence derived from alignment at F-serratus_M_contig895:14763..28916- (Fucus serratus male)
ATGTCTATGGCCACCGCGACGAGGACAGAGTCCGATGCCTTCGGAGACAT CGACGTCGATAGCTCCAAGTATTGGGGCGCACAGACTGAGCGCAGTCTCA TGAACTTCCCCATCGGCGGGGTCGAATCTCGCATGCCGATCGAGATCATC AAAGGTGGGATATAGCAATGTCAGAGATAGAGGTACTGACTTCTTGTACT AAAATGAAGTACATAGAGCCAGTCTTACTTCAATTCAGCAGTCGGTTACC TGAAACCCTTTATTCTGGATTACTTTTCAGCAGTAGTACATGTAGTAATA AACAGCGTACATACACACATATTAATTGGTCCGTGGTGACCTGCCAAGGC AGCACTCGTTCGGAACTACCTTGACGTTTACTGGCCCTGTGCCGGCGAAC TCTCGGCACTGAACGCCAGCGATACGCAATTGCGTGACCCGATAAACTCG GGACTGGCCCGATGGCGAATGGTGGTTCAAATAAATACATGGACGCCGCC GCGGAACTCGGGAGGAATCCCGTAAGCAAGCACCAGATTCAGCCTGTGTA TGGAGATGAGCAGGCTGACGCGGGATGGGATTGCCGAACCCATCTCGCGA GACCAAATTCTCAGGCGCGAACGCGGATAGGGAAATATTATTTTTTCCTG TTCAGCTGACCACGTGCAGGATTGGCAACCTTACCGGGTTGATCCGTAAT CTTGCTATGTGTGTGACCATACATACACGTGGGCCTACATCCCGAAAACG TAATACGGTTCCGAGCTTTGTAGATCGGGAAGGATCTAGCTCTAAAGTGG CAGTTACGATAAACTTCTTAAGAGAACGACGAAAGAGACGTATTGCCCCA ACACATCTCGTCAACAGTCGACGTTTGCATGCAAGCCATCCGGTAACTCC ACGATAGTTGAGCTCTAGGTATACTTTTGTTCTACATTATACCAGAGAGC TGTAGCTCTTACAGACAGTAGTGGAGCTCTTGAGCTAGCTCTATACTCGA GCTAGCTCTATATGTAGGTCGGCTAGATGTACGGCGGGAAATGTGAGGTC AGATTAATACCTTGTACCAGGTAACTATTAATAGTACTGTTGTACAGCAG TGTAGCGGCACAACCTACGAGTACTGTACCCTGTTCGAGTGTGTGAATTA GTTAGCTCCTCTTTCCGAAGCGCAACTACTCCGTATTTCCATGAGAGTAC AATTACAAATGGAAGCCACCGCAATGATGGAAGAATCGTCCTCGGCAGCA ATGTGACCAGTCTACACCCCCACGCGTGCAGACACCTCGTGGCTCTTGCG AAAGTGCTGACTTTCCGTGTGAGGGCACGGCGTGGATCGCAAACGGAATA TTGGAACCAGCAATCATCCCGTACACAGCCTCCGATGTTGTTAACATGCC CACTTCCTACCAATATTAGGTGCTGAAAATAGGGGGCGCGCATTCTGTGT GACCTTCCTCCTGTGTAACCCCGGCTGGTGTGTCCACAAGTCTGACGTCC AGAATGAATGGGATGACAACACACACACACATATATATTAATGGTAATTG GTCCATGGGGATGAGTGCAAAGATAGCACCCGTTACTGGAACTACCATGA GGATCACTGGCCCTGTGCCGATGGACTCTCGGTAGTGAACGCAATCGGTA CCCAATTGCGTAGCCAGATACACTCGGGACTGACCCGATGGCGTATGGTG GTATAAGTATATGGACGCCGCTGCGGAAAGTGGGAGGAATCCCGTGAGTA AGCACCAGATTCAGCCTGAGTTTGGCGAATGAGCAGGCTGACGCGGAACC GGACGGCCGAACCCGTCTCGCGAGACCAAATTCTCAGGCGTGAACGGCGA CAGGGAAGTATTAATTTTCCCTGATGAGCTGACCACGAGCAGGATTGGCA ACCTTACCCGGTTGATCCATACTCTGCTCTACGTGATGACCATACATACA TACGGACCTATTAGACCGGTCGCCCCGGCGGTTCAGTTGGTAACCTCGAA GCCCTCTGACGTCGGGACGTGAGTTCGAATCTCGGTGCAGTCACATGGAC GGGATTTACATCATGCCCAACAAGTAGTGGAGAGCGATCAATTCGTGGGT ACACAAAATTCGACTGCACGGTCGACGAGGGGAAAGAATGGCTGAAGCCT TCTCGCGAGAAAAATTAAGGCAAGCACCGCAGAAGGAAGGTGGAGAAATC CTGTGTGACCTTCACACACACACAAATCAAGTTCTGAATGCTGTGGAACC AGATACGTGTGGAACCGTTACAGTCTACAATGTTATATTTTAAACTATTA ATATGGTACTTGTGTACTCCGTACCATGTTGCAACCGAATCTGTCATCGT GTGCTTTTGTCTCTGTTCTGGTGTATACCTGCATTAAGTGTACGAGATAG TGTAAGTGTACGAGATATCGGTGGGTTTCTCCCCTATGTCATACTGTTGA CCGTATGGCAGCACTTCTATGGGTGGGAACCCAATTTTATCCCATGAAAA GTATTTGTTCCCGCAGCCTATATTCCCTCTTAATAAAACGTTTTGATAAA TCCTCCCCCCCCTGACTGAGTGGATGCTCTATTATATTGATAATAGAAGG TTACGAGGCCTTCAGATTTTCTTTCAACAGTGTCACGTAGAAGCTGCCTT AGCTCTCCGTGGTCAAATTTAGCGCAAACTTGGCATCTGTAAAAAAAAAT GAACGAAGAAAAGCGATCTATCTCAACAGAGTCTGCACCTACACGGGAGG ACGAACCCTCAACCTTCAGCAAGTCAGAAAGGGGAAACTCTTAATCAAAC ATACGACGAGGAAATCAGGCGAAATGAAGCGGGACCGGACTTTCGCCTCC CTTCGTCCCGGCGCTGCCCGCTCCGAGGCGTTCTTGCAGGCTTCCTCCGG CATGTCGATACTCCCCCCCCCGTTCCATGATTTTAAGCTCATCTCCCGGT CCCATCCCCCCTGCGCTCTGCTCCCCCGCCCCTGCGACACCCACGCTCTT CCCCGTCGTCGGTCCCGCGGGGCAGAAAGGATGTGTCGCAGGGGCAGGAG GAATGGAGCACAGGGGTGGACGAGACCGGGAGCGGAGTGGAATCATGGGC GGGGGGGAGGGGGGGTATCGAGATGACCGAGGAGGCCTGCGAGGACGCCA ACGTCGGAGTAGGCAGCGCTGGGATGAAGTGAGGCGAAAGTCCGGTCCCG CTTAATGTTGCCTGATTTTGTTGTCGTTGGTACTAACTTGATCTGTTTGG GAGAAGAGTTCCCTCTTGGTCTTCCCTGCGAACGATTGGACGATTGAAGG TTCGTTCTCTCACGTAGCGCAGACTCTGTGAGTTCGCTTTCCTCGTCCAA AACGTTTGACAGATGCCAATTAAGCTCTGAAATTTATTATTTTTCTCCGA GTTTGTATGGTAAGTTCCAACACGTAGACCCCAAGAAATGAAAAGCAAGG GGTTTCCATGTAATTGGCCTCCCCCTCTGGGACTTGGCTTGTTGGAGGTT GAGATGCGTTGTGCACCCTCCGTGTAGCGACTCTTGGTTGAGTTTTTGTG AAGTCTTCCCCAAAAATTATGTAATGGAAGGTCTTTGAGCGAGATGGGTC TCGCGCGGGAGAGGTGGTGCTGTGCTGGGGATTGGTTGAATAGGCTTGAC GTGAACACATGTCACAGACAAATGTAAAAACCGGTGTATTATTACAGTGT CGTTGTAGCCCACATTTGGGTCTACCAGACAAACACGAGAGCACCACAGT GGTTCCCAACGAACTGAACAAAGGCGGGAAAGTCAAGCGGATCATAGAAT GAAATTACGGAAACAATCATAGCGTCCTATTGGTCAGAATAGTCTACTAA TCTATCCGCATTTTGGAATCGAATCCGTTCAATTATGGGCTGGCATCGAA TCAAGAGTTGCAACCACGCGTCGATTTTGTTTTGTTTTTTATCTCCAGTC CACTCTCAGGCGAAAACGTACGCCGTAAAGTGTACTTACTTTGAGCGTTG GAATTGACTTGCAGTATGGACACGATTCTCTCTCAATAGGCTTCTCGGGG GCTGAGGTCGAGATTTCTCTGTCTTTCCTCCTATACCGTACGGAATTTGG GTGAGGAAATCCGTACACAGCTTGTAAAACGTCAAATGTTTGCTTTGCCT CATTGGTTGATAAGTTTAATGAGAAGAGGATTTCGCGCAATTGCCATCTC CTGCCGATTTTCTATTTTTTTGTTGGGGGCGGGGAGGGACAGTCCAGAAA TCTTGGTCATTTTTTTCTGCGGAGAGATTCAAATTTCCCTCTCCCAAGCA AGGTAAGTACTTTGAATACTACTGTAATGTACTGTAGGAGTTTGAGAAGG GAGTTCCTATATGCACACGTGGTGTGCACGCGAAATTCTGCACACCTATC AAAGCAAGCACACACCCGGACCCCGAACTACTGCCACTGTGACATTTTTT TCTTTCTTCGTTTTTTCGTGGTCTCTGGTCTCTACTGGTAGTGTGTAGAG TTGGAAATGTAGTAGTCGTCAGAGCTTATTTTTTCCGTTCGTTTGGAAGT CGTTTGTACTATTACTACTGTGCTTGAGTGGGGTACAGCACAGATACGAG TATTAATAGCACAGGTGTGTCATCAGTGTGTGTGTGTGTCATCAGTGTGT GTGTGTGTCATCAGTGTGTGGCATCAGGGCGTGCGACAGAGAGACGATCG GTGCGCTGGCTGCGACGGAGAACACCGAGGGCTTCCCATCGGGTGCATCG TAGTTGCTCAGCAGTAGTCAGGGCGGTCGGAGCCGCTGCGCCGCTTGAGC GACCGCTCCTTGGCTGATTTCGTGACAAATAGACCAGTACAGGTATCAAG TATAGTTCTTCGTTTATACGAGTACTGCTGTTGTACCGTATGTGACATGT GTACTACATAACGAGTACCGAGTACATGTGGAGAGGTAGCTTATTGTTAA CAGCAGTCGCTTTTTACTATAAACTCCCTCGTACCCTATTAGTTGAGACA AGTTAACACGGAAAAGGTACAGTACGAGGAAGGGTACGACTATTTGTAAT AGTACTGGTACCTTGTACAATGTACTCTGCATTTACTATGACTATTAATG TGTGCTTCAAAGTACAATGCTACCGTACTTGTACCACGGTACGACAATTG TGCGACAAAGAAAAGATAGAAGCTGCTGCGGCTGCCACGACAAATGAGAA ATCAATCACGGCCCTCTGGAGGCACCAAGAACATGGTGGTTGGAGTCAGC GCACCCGTCCTTCGCAACTCTTTGTTTCGTTCTGTCTTTATCTCCAGCTG GGCTCACGTGCTTTGATTGGTTGAACGTGAAGTAAAGAAAACTTGAGTTT TTGTACAGACGACAGGATCGTTCGGATTCTACACTAGTAACAGCAATAGT AGCCTATTAGTAGTATATAATAGTAGCCTATTAGTTGTATATAATAGGAT CACAACAGAGGCGGTGCGCTATGAACAGTAGCTTTTAATGTATGGCGTAC TGTACGAGTATGATCTATCACAACAGGATGTCCGACAGCGGCAACTCAGT CAGCGCCAAGGATATTTGTAACTCCCCAAAAATGCTTTTTTTTTATTAGG TAACCACTGTTACAGTTTGACTTGGGTACAGTACATAAATCGCGGCGGTT ATAAACGTGGCCTCCACGCGTTTCAAGGCGGACAAAGGCATCACGGACGC TTTGGTACACCTGAGGAAGAAAAGGGGGCCGGGGGCGGGGGGAAGCAACT GCCGGAGAGTCGGTCCTCGCGACGCCGCTTTGGGGTATGCTTTACGCTGA CGATGCCGGGGTCGTCTCGCAATCACCCGAGCAGTTGAGGAAGATGATGG GGGTGATCGTGGTCGTGTGCGCGGCGTTTGGCCTCACCGTATCGGAGGCC AAGACTGAGATCATGTGTTTACGCGCGAAGGGGATGCCGGAGTCCACCGC CACATTCAGCGTAGAGGCAGCGGGCCAAGTGTACAATCAGACGAACGAGT TTGTATACCTCGGAGGAAACATCAGCAAAATGCCGACCTGTCCATCGAGG TCGACCGGCGCGTACGCAACGCATGGTGCAGCTTCCGGAAGTACACCCTC GAACTGTACGACCGACCGAGCGCTCCCCTGGAGCTCAAAATTCGGATGCT AAGAGCCGAGGTGCTCGAGACAATGCTGTACGGATGCGTCACGTGGAGCC CGCGCGCGTGCCACTACGACACGCTGCGCCGAGCCCACCACAGGTTCTTG ACTCGCTGCATCGGTTGGCAAAAGCACAATCGCGCCGACCACCCGATTTC CTATCTGGACACGATCCTCAAGACGGGAAGTGAGAGCATCGAGGCGACTT TACGCAGGAGGCGGATCTTGTTTGCGGGATGTGTGGCGCGCATGGAGGAT ACGAGACTGCCGAAGTGCGTGATGTTCGGCGAAATGGTGGGGGCGCGGGC TGTGAGAGGGGCCAGGAAAAAGAGTGGATGGGGTGTTTCCTGGACGATCT CAGAGCTTTCGGTATCAACGCCGACCAGTGGACAACTGCAGCCCAGGACG AGGGGAAATGGCGCAGAACGGCAGAACAAGGGGCGGAACGTTTCATGGCA AAATGGATCGCTGCAGAGAAAGTCAAGGCTGGACTACGGCACGCAGTGGT ATGCCCGAACGTGACGGGAAGAACCAAGAAGAGGATAGCCCAAAGTAAGC GGGCTCGTGCTGGTTCGCTCGCCCTTGTTGACTAGCCACAAGTGGCGCGA ACTGGTATCCTCCGGACGTTCTGTTTGCAGATGCCATGACGTTTTTTCTC TGGTGTTACGTTTGTTTTGCTTTGTTTTGCTTCGTTTTTTGTCTCTATGC TTTCGTTGAAGCCGCAGCCCTTCGTTCAATCGTCCTTCGAATACAGGCGC CCCCGTAGCCACACGTGTTTCTATTTTTGGAGATGTCGCTTTTTTTCGAG TATTTCTTCTACCATTTCCGCTTTCTCTTTGTATGGAGAGTACGTCGTAC GTTCTTTCCTTCCGAATGGTGTTTTCTACCTTGTGACCACGGGCTGGTTT TTTTTACATCAGCTTATGTGAGAATTCAATCAAATCAAAATAAAGCGAGC AGCCCTTGTACTATACATGCGGCGAATACGGGATTAATAGTACCAGTAAT TGTAATAAATGTACTCCTACATACTAGTAATTGTAATAAATGTACTCCTA CATACCAGTCATACACTTCACGAGAGAGAAAGAGAGAAAAATATATATAT CTGATACTACGATACGTGCATCGCGTATTCATATCCACCAGTGAAAGCAC GCGGCAGAAGGCTGCAATAGATAAGGCTGTCGAAGGTTCGTAGTGGCCGC CGTCGCGGTCAGCGTAAGCACCGCCCTCTTCTGTGCGTCCTGATACGCCC AATCTACCCCCGGCACTGAGGAAGTACGTTCGTACATAAAAACCCACGGC TTCCGAACGAAGAAATCCTCCCTTCTCCTTTGAGTACGAATATACCTGGT ACTACTTATGCTATTTACTAGACTACAGTATAAATAGTGTTTTGTTTTGT TTTTTAATGAGCCCCCTGTTGGGTTCAAATAAATGTTGACTCACGGTTCA GGGTTTGCGAAAAACGTTTTTGTGCAAAAAATATTGTGTCAGACCAGGGG TCGTGAACCCCTGTGGTCTGAGGACCCTCGTCTGAGAGAGGCGTTCTAGA GAATTTGTATGGGATCATATGCGTTTTCTACGCATAGGAGTTCTATTCGT AGGAGGCGTATACCTCGTCCGTCTCCAAGTGCTGATTACGGTACGACCTG TGAACTATTAACTTGAAGGAACTTTTCCCGGCCACGCGGGCGCCGATATG GCGGTTTTGTTAAGAGAGAAAAGGCGGGGATGTTCGTTGTCAGTCGATAC GAAAGAGCTGTTTGCACCGCGTACCGGTTACGAGAGGCGATGGGGGGAAG AGCAAGTTTCTTAGGGGTCAACCTGGCATCCCATCCGCAACGATCGAGCC AGCCGCCAAAGTCGATGGCGCTTTCTCCTTCTCAGCTCGCGAGTCACGCC TAAACGCGGTGCGAGAACCAGAGGCACGGGGATTTGTCGTAGCTCGGGAG TTCCGAGAGCCAAATTATTTTTGTTGTTGTGACCGGCCCAGCAGGGTCAA GTATTTAGAAGCTGTCTCTGCGTCGTATAGAGAGGAGGCAACTTCGGTTA GCAAAGACACCCTCGTGGTCTCTTTTCGTGCTGTGATTTTTCCCTAGCGG AGGCCCCCGAGCGTGAGCACCCCGAGGGCCTCTGCTCCGCCTTCAACCCT TGTGGGTAACCTACTGGGCGGTGATAATGTCATGATAGCACGAAGTTGTT AAGTCGTACGCCCTCCTCTGTTCCCCTTCAAGACACGCCCGGCCACCTCT AGCCCGCGGCGGACGTCGTGTCCCGGCTATAACATTGGAAGACATGGGCG ACTGCACAATTGTTTGTATAGTCGGGGGAAGGGGGGGAGATGAGGAGTTT GCTGTTGTTGTTCCAAGAAAAATCTGAAGGCACCTAGACCTTCTGAGCAT CCCCCAGTCAAGGGGGGGGAAATGTCAAAACGTTTAGGTGAGATCATAGG CTGCAAAGACAAAGCCCCTTCATGGCATTGCAACGGGTTGTTGTTGATTC ACGCTTTCAGCGAAATATTTTAATATCAATACCGTCGCCCGAGCGGTCTA TTAAGTAGGTAAACCTGCATACCTGCTAGTGCGGAAGTCGTGAGTTCGAT CCTTACCCAAAGTAGGATTTTGTGTTGCATGGCGATAAAAATCCTTAGTG ACCACAGGCAGAATGGTAATGGTATGTATGGTCACACACATAGCAAGAGT ATGGATCAACCGGGTAAGGTTGCCAATCCCTGCTCGTGGTCAGCTGAACA GGGAAAATAATATTCCCCTGTCCGCGTTCGTGCCTGAGAATTTGGTCTCG CGAGACGGTTTCGGCAGTCCCATCCCGCGTCAGCCTGCTCATCTCCATAC TCAGGCTGAATCTGGTGCTTACTTACGGGATTCCTCCCGAGTTCCGCGGC GGCGTCCATATTGTGAGGTCCATCGGCTATAAGTGATATTGAAAAGAAAA GAAAAAAGGCCAGGGATGGAGGGCCCACCCTCCGACGCGGAAGCATGCTT CAATTTCAAGTACGCGACACCGCGGAGCTTATTTTTTTTACTGAGAAATC CTCGGAAAACGCGAAAAAAAGGCCTCCTCAGCAACAGCAGTATATTTGTA AAATATATTTCTACGGAGTGTTTTCATATTAATATCATAGTGAAAGATGA TACCAGGTACGGATCCTTGTTCCGACCCGAAAACCTCGCCCCTCGCGACA AACTCCGGATATGATGATCTTCTCTGTCTCTCTCTCTCTCTCTCTCTCTC TCTCTCTCTGTCTCTCTTGGCGACTTGCTTGGTGTGGGTTATCGTGATTC GCGCCCGGCCGTGGCAGGATTCGGTGTGTTGAAGAAGTGCGCGGCTAAGT ACTCCATGTCCACGGGCAAGCTTGACCAGTCTGTGGGGGAGGCGATCGTC GAGGCTGCTGACGAGGTAGAGCTGCAAGTGCTGGTAACAACGATGAACCT TCTTGTTGTGTGGTAGTCTTGACGCTTCTTTTGACCTCGCGGTCCGGCAT CGAAAGCGATGCACAAGCAGTTGAGCAGTGTGTGCGCTTCTCGAGCCGTT GGGTTTCCGACTGATAACCTGGCTCGTTCTGAGGAAGGCCTAAAGGTCGG GTCTGGTTAGGCTCCTCCTTGGTTTCGACCATGGTTGGTGACAGCCGGAC GAACGGCGAGGACGTTATTAAATGTTGAGTTTTGTTTTGTTTTGTTCTTA CAGTGCAGGGAATGAGCTCCTCGCGTCCTGCTTAGCATTTGTCGGGGCAT GGATGTGTGAGTGTGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTT TATTAAATTGCACATAACCGCGCAATCCGACCCTGTTACCCTATTAATAG TCATTCTATGCCACTCGCATTGGTCTTCTCGAGGGGTATTGTTATTAAGG GATCAATAATACTTGTTACGAAAACCTCTGCTCAGACGCGACAAAGGGGA CACACTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAACCACGTCCGTGT CATCCTAGTCATTCTATCGATTGATCCTCCCGGGGGGGTGTGTGTGTGTG TGTGTGTGTATCGATCAGTTTGAACATAATCGCGCAATTCGACCCTGTCA TTCTTGTTATGATATGCCAAGGAAGGGGGGACGGGGGGAGTCAATTATGT GTATATCGTGTCTGCATGCGCTTTCGATAGATGTTGCAGTTTCTATCCGC ACCTCTCGTGGCCGGCCGCATCTTTGCATAGGTGATCCAAGGAAAGCTTG ATGGAAATTTCCCGCTGGTGGTGTTCCAGACTGGCAGCGGCACCCAAACC AACATGAACTGCAACGAGGTTATCTCCAACAGGCAAGTGCCACGGCATAT ATACCGCTTCGCTTGTTCTGCGCGAGGCAAGTGGTACGCACCAGGTGGTA CGAAGGTGGGGGGCACTCGTAACAGAACGAGGTGTAGAATACAGTATTAG GGCTTTCGAGACACGGCAATCAGCGGATCGTGCGTGCCCGGTGCCGTCGG AACCGGGTACCGTTCATTTGCCCCTCCTTTTCCTGCACCCGCCCCCCACC CCCCACCCCTCCCCCCCAGAACATAAGATGCACGTCGCAATACAAAATAA TTAAGGGCGAGTTTGGTCGGAACTTTTGTTGTATCGTGCCTTTTGTATCG TGCGTCGCTCGCGCACCAGAGCAATCGAGCTGCTCGGAGGGGTCATGGGG ACGAAGAAACCTGTGCATCCCAACGACCACGTGAACATGGGGCAGTCTTC CAACGACAGCTTTCCAACAGCGATGCACATCGCCGCAGTTCTGCAGGTGG GGGAGATACGACACATGGGTCGGTTATACAGGGTTTTTTTTTTTGGGGGG AGGGTGGGGGGGCGTTCTCTCCTCCTTGTGGTGGTCTTTTGTGAGCGCGT GCCGTTCGTGACACCCGCGCTTTTTCGCGACGACAGCTCTTAACCCAAAC GGCATCATATAGATATAATACGAGTAACGCGATTCGGTGAACAGCACTGG GGCCCGGAACATGACCACGGAGAGCGATCGCGGGTTTCGACAGGCACACG GCGTTCTTTTGCCGGGGCTGCGGAAGCTACACCAAGCGCTGTCGGCGAAA GCGGCCGAGTGGAAGGACGTGATCAAGATCGGTCGGACGCACACTCAAGA CGCCACGCCGCTGACGCTGGGGCAGGAATTCGGAGGCTACGCCGCTCAGG TACAAATTCCTGGTGGGAGCCCTAGGGGACCGGCCCAGCCATGAGGCTTG CGCTTTGTCAACGGTTCTTCTAGGTAAAGCCTCCCGGCTCGTTCATTCCA GCCGCAGCTCTTGTGAACGAATGCCTCTCGTCCAAGCAAACGCCACTTGT TCCCTGTAGTTCAACCGCGCCCCCGTGTCCCTTTGATTTTCAAGTATATT TCTCGTTCTCGCGGGTACCGTCGAAGGTACCGTCACCCCACCCCTTTTCG ATGGAGACCTTTGCCTCGCGGAATTCTCGAAGCGTCATCGCGACGCGTTA AAACCAGCCCTTCTTGCTTTTGAGTGCTATTTTTTCGGCAGCCCTGGCGG TATTGGTGACGGAGGCTTGATGGTGATATTCATAAAACCACTTTTAATTA TTATTGATTGACTTGCTCCTGTCCGTAAGTCCTAGGGAAATATTTGCCTC CCCAGGGTCTTAAAAGAAAAATCAAGTACATGAAGCAAGGGGTTTGCGTA TTTGTGGTGATGAGTGTTGAGGTCCAAAAATTATGGCAAAAGTTTGTAAA TTTTCTTATACAACGTTCCCCCTCCTTTTTTTTTTTTTTTTTTTTTTTTT TTTTTTTTTTTTTGAACGCTATTATATAAACATGTTTTTTACGAGAAGAA AAAAAAATGCATCTGTTGGATTTAAAACCTACGACCTTCAGGGACCTTCA GGGCGTAATCCTCATGAGCCAACCCAACTGCTCCGTCACGCGTAAAATTG AAGGTATTATTCATAAGCTTGAAATGATCAGAGAAAAGTAACTGTGGTTT CCAGAACTATATTACTTGTATGTGCGGCAATCTAGACAAGGACACTCGAG TTCGGGTAGAGGTCCACTAATAGTTTTACTTACCGCTCTGCCACACCACT AGGTCGAGTACAGCATCGAACGGGTCGAGGCCAGTCTGGGGTCGCTTCAC CGGCTTGCTCTCGGCGGGACCGCGGTCGGCACCGGGCTCAACACGGTGAA GGTAAAGGATCGACGCTACCTGTAGAGAAACAAGAGAGTGTGGTATCAAT ATCTTGCGGTTGACGGTAGTGCTGGAGATCCGCCTTTTTCCTCGGCGCCA CGAAGAAAGCCTTCTCACTAAGGTAAGGGAGGGGGGCAGGGGGGGGCGTT CTGGCTTTTCTGTTTCTCGCTGGTCGACGTTGGCGCGCCATCGTGTGGGG GAGACTATCGTAGAGCTCAAGGCTAATTTGATAGGCCTCGTGTGGTGGTT CGTAGGACAAAAAAAAGAAGATAGGTTTTAGAGAAAAATCTGAACGCGAC CTTCTGAGGATCCCCCAGTCAGGGGGAAATGTCAAAACATTTAGGTGGGA TCATAGGCTGCAAAGACAAAACCTCTTCATGGAAAACAAAACAAAATAAA ACGTGTACTTGTATTGCAGTAGTACTTGTATTACCTCGTAATGAGACACA CACGCTGCCCCCACCCGCAGGAAAAAAAAAGTAAAGAAAACAATAGGAAA ATAGACCACTTTGGAAAAAAAAAAAAAAAATGCTCGAAAGAACTAAAAAC TAAGCTAAAACGCTTCTAATGAAGGCACCGGCCCTTTGTTGCAGCGTTGG GGGATAAAAATGTATAATTTCGCTCAGCATGGATGAGAAAAACGAAGCAA GAAATACCCCCGATATACCGCCGTGTGCGCAACCCGCCTGTAGCCATCGA ACGTCTCGCGCGTCAATCCTTTTTCACAAAGAGGGAGCAATGGAGGTTGG AGAAAAAAAACTGACGCGCCGACTGCATAAGCTTAATGAAGCCCTTGACT CGATGGGGAGGAGGGGGGGGGCGGGGATTCAGTCGAGGAAGGCGTGCGTT GTGCCTGTGTTAACGTTTGACTAGGGGAGCTATGCATATGTCGCTTTATT TAGCCTCGCCTCCGGCGTACACCAAACCTCGATCGATCGTTCCATTACTA TTGGCTGCAGTTTTTCGCCGTCATACATACAGGGTATTCATGAAGCGAAG TACTCGCTCGTATGCACCAAACGGGGCAAGACCAAAAAAAAAAAAAAAGT ATAGTAAACATGTTGGTTTATTTCTTGCTTTTTGTACCTATTGTCGTTTT TAGCTCTGGAGGGGGACCGAACATTCCCCGTCCCCAACATCATCAATGAC GCTGCTGAAACCGCAGGGTTACGACGAAAAAATCGCCGCGCTCATCTCCG AGGAGACGGGGCAGCCGTTCCGTGACCGCGCCCAACAAGTTCGAGGCCCT CGCGGCGCACGACTCGATCGTGGAGGCCAGCGGCGCCCTCAACACTGTGG CGTGCTCGTTGATGAAGGTATAATATACAGTAGTATAGTGTATAGTATAT TTAGTAAAGGTACAGTAGGTTAGGTTGTCATACGTTAGGTTTGGTGGGAG GCGCGCTCGTTTTTGCTGATGCGTGTAAATCGTGCTCTCTCCTCCATGGA AAAAAAATATGTTTTTTTTTTTTTTGTTTTTTTTTGAGGAGGGGGGTAAA AAAAAAAGGCAAAATATAAAATATGCCTTGAGTTTTTTGTGCGTGAACGC CGAACTGGCCTGGCGTGTTCAATGACTTTTGTTCAGACTCTCGCTATTTT TGTTTCTTCCCGAGGGGATAATATGGTCCAAAATAATTCGCGCGCAAATG TCATATAGCCCCTGCTGTGTGCGTGCCTGCCTTCCTGGCTGCCCGAGCAG ATCGCCAACGACGTTCGCTTCCTAGGGTCCGGGCCGCGCTGTGGCCTGGG CGAGCTCAACCTTCCCGAGAACGAACCAGGCGAGATGAGGAAGGAGGAAA TACA
back to top

Coding sequence (CDS) from alignment at F-serratus_M_contig895:14763..28916-

>mRNA_F-serratus_M_contig895.20305.1 ID=mRNA_F-serratus_M_contig895.20305.1|Name=mRNA_F-serratus_M_contig895.20305.1|organism=Fucus serratus male|type=CDS|length=1968bp|location=Sequence derived from alignment at F-serratus_M_contig895:14763..28916- (Fucus serratus male)
ATGTCTATGGCCACCGCGACGAGGACAGAGTCCGATGCCTTCGGAGACAT
CGACGTCGATAGCTCCAAGTATTGGGGCGCACAGACTGAGCGCAGTCTCA
TGAACTTCCCCATCGGCGGGGTCGAATCTCGCATGCCGATCGAGATCATC
AAAGATGTCTATGGCCACCGCGACGAGGACAGAGTCCGATGCCTTCGGAG
ACATCGACGTCGATAGCTCCAAGTATTGGGGCGCACAGACTGAGCGCAGT
CTCATGAACTTCCCCATCGGCGGGGTCGAATCTCGCATGCCGATCGAGAT
CATCAAAGGATTCGGTGTGTTGAAGAAGTGCGCGGCTAAGTACTCCATGT
CCACGGGCAAGCTTGACCAGTCTGTGGGGGAGGCGATCGTCGAGGCTGCT
GACGAGGATTCGGTGTGTTGAAGAAGTGCGCGGCTAAGTACTCCATGTCC
ACGGGCAAGCTTGACCAGTCTGTGGGGGAGGCGATCGTCGAGGCTGCTGA
CGAGGTGATCCAAGGAAAGCTTGATGGAAATTTCCCGCTGGTGGTGTTCC
AGACTGGCAGCGGCACCCAAACCAACATGAACTGCAACGAGGTTATCTCC
AACAGGCAAGTGATCCAAGGAAAGCTTGATGGAAATTTCCCGCTGGTGGT
GTTCCAGACTGGCAGCGGCACCCAAACCAACATGAACTGCAACGAGGTTA
TCTCCAACAGGCAACTGCTCGGAGGGGTCATGGGGACGAAGAAACCTGTG
CATCCCAACGACCACGTGAACATGGGGCAGTCTTCCAACGACAGCTTTCC
AACAGCGATGCACATCGCCGCAGTTCTGCAGCTGCTCGGAGGGGTCATGG
GGACGAAGAAACCTGTGCATCCCAACGACCACGTGAACATGGGGCAGTCT
TCCAACGACAGCTTTCCAACAGCGATGCACATCGCCGCAGTTCTGCAGGC
ACACGGCGTTCTTTTGCCGGGGCTGCGGAAGCTACACCAAGCGCTGTCGG
CGAAAGCGGCCGAGTGGAAGGACGTGATCAAGATCGGTCGGACGCACACT
CAAGACGCCACGCCGCTGACGCTGGGGCAGGAATTCGGAGGCTACGCCGC
TCAGGCACACGGCGTTCTTTTGCCGGGGCTGCGGAAGCTACACCAAGCGC
TGTCGGCGAAAGCGGCCGAGTGGAAGGACGTGATCAAGATCGGTCGGACG
CACACTCAAGACGCCACGCCGCTGACGCTGGGGCAGGAATTCGGAGGCTA
CGCCGCTCAGGTCGAGTACAGCATCGAACGGGTCGAGGCCAGTCTGGGGT
CGCTTCACCGGCTTGCTCTCGGCGGGACCGCGGTCGGCACCGGGCTCAAC
ACGGTGAAGGTCGAGTACAGCATCGAACGGGTCGAGGCCAGTCTGGGGTC
GCTTCACCGGCTTGCTCTCGGCGGGACCGCGGTCGGCACCGGGCTCAACA
CGGTGAAGGGTTACGACGAAAAAATCGCCGCGCTCATCTCCGAGGAGACG
GGGCAGCCGTTCCGTGACCGCGCCCAACAAGTTCGAGGCCCTCGCGGCGC
ACGACTCGATCGTGGAGGCCAGCGGCGCCCTCAACACTGTGGCGTGCTCG
TTGATGAAGGGTTACGACGAAAAAATCGCCGCGCTCATCTCCGAGGAGAC
GGGGCAGCCGTTCCGTGACCGCGCCCAACAAGTTCGAGGCCCTCGCGGCG
CACGACTCGATCGTGGAGGCCAGCGGCGCCCTCAACACTGTGGCGTGCTC
GTTGATGAAGATCGCCAACGACGTTCGCTTCCTAGGGTCCGGGCCGCGCT
GTGGCCTGGGCGAGCTCAACCTTCCCGAGAACGAACCAGGCGAGATGAGG
AAGGAGGAAATACAATCGCCAACGACGTTCGCTTCCTAGGGTCCGGGCCG
CGCTGTGGCCTGGGCGAGCTCAACCTTCCCGAGAACGAACCAGGCGAGAT
GAGGAAGGAGGAAATACA
back to top