mRNA_F-serratus_M_contig891.20283.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig891.20283.1 vs. uniprot
Match: A0A6H5L229_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L229_9PHAE) HSP 1 Score: 275 bits (703), Expect = 2.240e-79 Identity = 170/335 (50.75%), Postives = 199/335 (59.40%), Query Frame = 1
Query: 199 PAPPYPGPIDNSGLVMDADTGGKIPGTGRRLRVRLVRGYHFVVVPQEAWKALHAWYGGGPALPRLLVPVQDGASGIIVHEPQLYPEFSRLDPVLRPTVKASR-------------------------SAHTLDANLLPEARSAAATIAVKNDGSYRGLLANGNPTNP-------ANPSTXXXXXXXXXXXXXXXXXXXXXXXXXLTNGMK-------GGAESGKAKAKVEMHPCSSCGRPTKYKCNSCMKNANRVFYCSKSCQAAHWRYHKGYCGRRDSEEALTFAKRCKAGLNNLGNTCFLNSAVQCLSHVQPLTRHFLTDAFLVDVNTTNPLG 1086
P +PGPIDNS LV+DA T G IPGTGRRLR+RLVRGYHFV+VPQEAW ALHAWYGGGPALPR LVP++D SG +V+EPQL+PEFSRLDPVLR S + ++ N L +AAA GS G G T P A+P+ XXXXXXXXXXX G + K +PC++CG P K KC SC K +RV YCS +CQ AHWR+HK +CG + S L+ AKR KAGL+NLGNTCFLNSAVQCLSHVQPLTRH L++AF D+N TNPLG
Sbjct: 720 PPAAHPGPIDNSELVLDAGTPGTIPGTGRRLRLRLVRGYHFVLVPQEAWIALHAWYGGGPALPRALVPIRDSDSGRVVYEPQLFPEFSRLDPVLRSATVCSSGIVGNNDDAPSNEDFASDKEDGPIANGSPVEENPLVAEVAAAADSKEDTGGSVDGNGEGGESTGPPPAPTEAASPAPPGAVAEGPQENRSGXXXXXXXXXXXXXXXXXXXXXXXXGSVDKKTKKTGDAWYPCAACGAPCKKKCTSCSKTQHRVSYCSPACQKAHWRFHKKFCGGKGSGTGLSLAKRGKAGLDNLGNTCFLNSAVQCLSHVQPLTRHVLSNAFQEDLNLTNPLG 1054
BLAST of mRNA_F-serratus_M_contig891.20283.1 vs. uniprot
Match: D7FSH2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSH2_ECTSI) HSP 1 Score: 263 bits (672), Expect = 2.190e-75 Identity = 195/388 (50.26%), Postives = 228/388 (58.76%), Query Frame = 1
Query: 79 PAVTAPAAARENGDSATQGV-RCGDVLAAGNCSKAGESDEAPAPPYPGPIDNSGLVMDADTGGKIPGTGRRLRVRLVRGYHFVVVPQEAWKALHAWYGGGPALPRLLVPVQDGASGIIVHEPQLYPEFSRLDPVLRPTVKASRS--------AHTLDANLLPEAR---------------------SAAATIAVKN---------DGSYRGLLANGNPTNPANPSTXXXXXXXXXXXXXXXXXXXXXXXXXLTNGMKGGAESGKA-------------KAKVEMHPCSSCGRPTKYKCNSCMKNANRVFYCSKSCQAAHWRYHKGYCGRRDSEEALTFAKRCKAGLNNLGNTCFLNSAVQCLSHVQPLTRHFLTDAFLVDVNTTNPLG 1086
PA AA +GD V + G+ G+ A P +PGPIDNS LV+DA T G IPGTGRRLR+RLVRGYHFV+VPQEAW ALHAWYGGGPALPR LVP++D SG +V EPQL+PEFSRLDPVLR S S ++ AN P A +AAA DG G G T P P XXXXXXXXXXXXXXXXXXXXXXXXX ++ G+ K + +PC++CG P+ KC SC K +RV YCS +CQ AHWR+HK +CG + S L+ AKR KAGL+NLGNTCFLNSAVQCLSHVQPLTRH L++AF D+N TNPLG
Sbjct: 617 PASAGSGAAMGDGDGGEGPVEKDGEAGTNGHQKTAAPQRVEPPAAHPGPIDNSELVLDAGTPGTIPGTGRRLRLRLVRGYHFVLVPQEAWIALHAWYGGGPALPRALVPIRDSDSGRVVFEPQLFPEFSRLDPVLRSATVCSSSVVGDNDAPSNEDLANDKPTAXXXXXXXXXXXXXXXXEKSPLVAAAAXXXXXXXXEDTGGSVDGKGVGNGVGGESTEPP-PXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVQVDRAGGRGXXXXXXXXDKKTKKNEDAWYPCAACGAPSNKKCTSCSKTQHRVSYCSPACQKAHWRFHKKFCGGKGSGAGLSLAKRGKAGLDNLGNTCFLNSAVQCLSHVQPLTRHVLSNAFQEDLNLTNPLG 1003
BLAST of mRNA_F-serratus_M_contig891.20283.1 vs. uniprot
Match: A0A6A3P1V5_9STRA (Ubiquitin carboxyl-terminal hydrolase n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A3P1V5_9STRA) HSP 1 Score: 129 bits (324), Expect = 3.980e-29 Identity = 103/332 (31.02%), Postives = 138/332 (41.57%), Query Frame = 1
Query: 169 CSKAGESDEAPAP------PYPGPIDNSGLVMDADTGGKIPGTGRRLRVRLVRGYHFVVVPQEAWKALHAWYGGGPALPRLLVPVQDGASGIIVHEPQLYPEFSRLDPVLRPTVKASRSAHTLDANLLPEARSAAATIAVKNDGSYRGLLANGNPTNPANPSTXXXXXXXXXXXXXXXXXXXXXXXXXLTNGMKGGAESGKAKAKVEMHP----------CSSCGRPTKY--KCNSCMKNANRVFYCSKSCQAAHWRYHKGYCGRRDSEE--------ALTFAKRCKAGLNNLGNTCFLNSAVQCLSHVQPLTRHFLTDAFLVDVNTTNPLG 1086
C G D+ AP P P I+N L+ + G LR +L YH+V++PQE W AL WYGGGP + R +V V D G + + +YPE D T ++ + TL N AR NG K A +G K V+ P C +C + T +C SC ++YC +CQ +HW+YHKG C S E L +R K GL NLGNTCF+NSA+QCLSHV+ LTR+FL++ + D+N NPLG
Sbjct: 99 CEFVGYEDKQDAPAAGSGNPAPSRINNLPLLHVSAETPLDELMGGPLRPQLKENYHYVLIPQEVWDALVIWYGGGPTVARFVVQVGDPEIGNVFNRVNVYPEQPE-DDEPEVTTNGTKDSSTLKTN--ETARE--------------------------------------------------------MNGTKDAAATG-GKLAVQRKPSVVSSSIPKLCGACRKTTGSLKRCGSCQL----IWYCGANCQMSHWKYHKGVCRSTLSAEEKEDEILQGLKAERRGKMGLRNLGNTCFMNSALQCLSHVELLTRYFLSNQYKKDLNRDNPLG 366
BLAST of mRNA_F-serratus_M_contig891.20283.1 vs. uniprot
Match: D0N8U1_PHYIT (Ubiquitin carboxyl-terminal hydrolase n=26 Tax=Phytophthora TaxID=4783 RepID=D0N8U1_PHYIT) HSP 1 Score: 129 bits (323), Expect = 5.350e-29 Identity = 91/280 (32.50%), Postives = 123/280 (43.93%), Query Frame = 1
Query: 280 GRRLRVRLVRGYHFVVVPQEAWKALHAWYGGGPALPRLLVPVQDGASGIIVHEPQLYPEFSRLDPVLRPTVKASRSAHTLDANLLPEARSAAATIAVKNDGSYRGLLANGNPTNPANPSTXXXXXXXXXXXXXXXXXXXXXXXXXLTNGMKGGAESGKAKAKVEMHP-CSSCGRPTKY--KCNSCMKNANRVFYCSKSCQAAHWRYHKGYCGRR--------DSEEALTFAKRCKAGLNNLGNTCFLNSAVQCLSHVQPLTRHFLTDAFLVDVNTTNPLG 1086
G LR +L YH+V++PQE W AL WY GGP + R +V V D G + Q+YPE PE AT D S + + ANG + A +G K + A + C +C +PT +C SC ++YC +CQ +HW+YHKG C D + L +R K GL NLGNTCF+NSA+QCLSHV+ LTR+FL++ + D+N NPLG
Sbjct: 139 GGPLRPQLKENYHYVLLPQEVWDALLIWYSGGPTIARFVVQVGDPELGNAFNRVQVYPEQ-------------------------PEDAEPEATTNGTKDSSMQKIDANGKNDDSA-------------------------------DGAKLAVQRKPAAVSCSIPKICGACRKPTGSLKRCGSCQL----IWYCGANCQMSHWKYHKGVCRSTLTAEEKEDDILQGLQAERRGKMGLRNLGNTCFMNSALQCLSHVELLTRYFLSNRYKKDLNRDNPLG 358
BLAST of mRNA_F-serratus_M_contig891.20283.1 vs. uniprot
Match: A0A2P4Y055_9STRA (Ubiquitin-specific protease n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4Y055_9STRA) HSP 1 Score: 125 bits (313), Expect = 1.550e-28 Identity = 90/289 (31.14%), Postives = 127/289 (43.94%), Query Frame = 1
Query: 280 GRRLRVRLVRGYHFVVVPQEAWKALHAWYGGGPALPRLLVPVQDGASGIIVHEPQLYPEFSRLDPVLRPTVKASRSAHTLDANLLPEARSAAATIAVKNDGSYRGLLANGNPTNPANPSTXXXXXXXXXXXXXXXXXXXXXXXXXLTNGMKGGAESGKAKAKVEMHP----------CSSCGRPTKY--KCNSCMKNANRVFYCSKSCQAAHWRYHKGYC-----GRRDSEE---ALTFAKRCKAGLNNLGNTCFLNSAVQCLSHVQPLTRHFLTDAFLVDVNTTNPLG 1086
G LR +L YH+V++PQE W AL WYGGGP + R + V D G + Q+YPE + P V + + T D+ + +++GS + NG K +S AK V+ P C +C + T +C SC ++YC +CQ +HW+YH+ C EE L +R K GL NLGNTCF+NSA+QCLSHV+ LTR+FL++ + D+N NPLG
Sbjct: 138 GGPLRPQLKENYHYVLIPQEVWDALLVWYGGGPTIARFVTQVGDPELGNDFNRVQVYPEQPEDE---EPEVTTNGTCGTKDS-----------AMQKRSEGSKFDV-----------------------------------------NGKKDSTDSTGAKLAVQRKPSTVSSSIPKLCGACRKTTGSLKRCGSCQL----IWYCGANCQMSHWKYHRIVCRSTLTAEEKEEEILQGLQTERRGKMGLRNLGNTCFMNSALQCLSHVELLTRYFLSNQYKKDLNVDNPLG 367
BLAST of mRNA_F-serratus_M_contig891.20283.1 vs. uniprot
Match: A0A662XHX6_9STRA (Ubiquitin carboxyl-terminal hydrolase n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XHX6_9STRA) HSP 1 Score: 127 bits (318), Expect = 2.400e-28 Identity = 100/315 (31.75%), Postives = 136/315 (43.17%), Query Frame = 1
Query: 208 PYPGPIDNSGLVMDADTGGKIPGTGRRLRVRLVRGYHFVVVPQEAWKALHAWYGGGPALPRLLVPVQDGASGIIVHEPQLYPEFSRLD--PVLRPTVKASRSAHTLDANLLPEARSAAATIAVKNDGSYRGLLANGNPTNPANPSTXXXXXXXXXXXXXXXXXXXXXXXXXLTNGMKGGAESGKA---KAKVEMHPCSSCGRPTKYKCNSCMK---------NANRVFYCSKSCQAAHWRYHKGYCGRRDSEE--------ALTFAKRCKAGLNNLGNTCFLNSAVQCLSHVQPLTRHFLTDAFLVDVNTTNPLG 1086
P P I+N L+ D G LR +L YH+V++PQE W AL WYGGGP + R +V V D G + Q+YPE + D P + VK ++S S +G+ A G NG K A S KA K V+ P ++ K C +C K N ++YC +CQ +HW+YHK C + S E L +R K GL NLGNTCF+NSA+QCLSH++ LT +FL++ + D+N NPLG
Sbjct: 109 PAPSRINNLPLLHVGDETPLDDLMGGPLRPQLKENYHYVLLPQEVWDALLIWYGGGPTIARFVVQVGDPTLGNAFNRVQVYPEQTEQDEEPEVTTVVKDAKS-------------------------SQKGVEAAG------------------------------------MNGTKAPA-SPKATGTKLAVQRKPSTASSSIPKL-CGACRKTTGSLKRCGNCQLIWYCGTACQMSHWKYHKLVCRSKLSAEEKEEEIMQGLAGERRGKMGLRNLGNTCFMNSAIQCLSHLELLTHYFLSNDYKKDLNRDNPLG 360
BLAST of mRNA_F-serratus_M_contig891.20283.1 vs. uniprot
Match: A0A2D4CH07_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CH07_PYTIN) HSP 1 Score: 125 bits (315), Expect = 6.380e-28 Identity = 94/277 (33.94%), Postives = 126/277 (45.49%), Query Frame = 1
Query: 280 GRRLRVRLVRGYHFVVVPQEAWKALHAWYGGGPALPRLLVPVQDGASGIIVHEPQLYPEFSRLDPVLRPTVKASRSAHTLDANLLPEARSAAATIAVKNDGSYRGLLANGNPTNPANPSTXXXXXXXXXXXXXXXXXXXXXXXXXLTNGMKGGAESGKAKAKVEMHPCSSCGRPTKYKCNSCMKNANRVFYCSKSCQAAHWRYHKGYC----GRRDSEEALT----FAKRCKAGLNNLGNTCFLNSAVQCLSHVQPLTRHFLTDAFLVDVNTTNPLG 1086
G LR +L GYH+V++PQE W AL WYGGGPA+ R +V V D A G ++YPE + H+ D T +D +A +P P N + KG + A +M CS+C R T C N V+YC CQ AHW++H+ C G + E A+ +R K GL NLGNTCF+NSA+QCLSHV+ LTR+FL++ +L D+N NPLG
Sbjct: 678 GAPLRPQLKEGYHYVLLPQEVWDALLCWYGGGPAVARFVVEVGDPALGNAFKRVEVYPELA---------------GHSDDGP----------TDTDDDD------VAMEDPVTPMNGTA------------------------------KGLVRRVSSTAAPKM--CSAC-RQTPASLKRC-GNCQLVWYCGAGCQTAHWKFHRSVCRAALGVDEKETAILDHIESERRGKTGLRNLGNTCFMNSALQCLSHVELLTRYFLSNQYLRDLNKDNPLG 889
BLAST of mRNA_F-serratus_M_contig891.20283.1 vs. uniprot
Match: A0A0W8D2F7_PHYNI (Ubiquitin carboxyl-terminal hydrolase n=2 Tax=Phytophthora TaxID=4783 RepID=A0A0W8D2F7_PHYNI) HSP 1 Score: 124 bits (310), Expect = 3.110e-27 Identity = 89/286 (31.12%), Postives = 124/286 (43.36%), Query Frame = 1
Query: 280 GRRLRVRLVRGYHFVVVPQEAWKALHAWYGGGPALPRLLVPVQDGASGIIVHEPQLYPEFSRLDPVLRPTVKASRSAHTLDANLLPEARSAAATIAVKNDGSYRGLLANGNPTNPANPSTXXXXXXXXXXXXXXXXXXXXXXXXXLTNGMKGGAESGKAKAKVEMHPCSSCGRPTKYKCNSCMK---------NANRVFYCSKSCQAAHWRYHKGYCGRR--------DSEEALTFAKRCKAGLNNLGNTCFLNSAVQCLSHVQPLTRHFLTDAFLVDVNTTNPLG 1086
G LR +L YH+V++PQE W AL WYGGGP + R +V V D G + Q+YPE + + P V + T D+++ ++ NG K + G AK V+ P + K C +C K N ++YC +CQ +HW+YHKG C D + L +R K GL NLGNTCF+NSA+QCLSHV+ LTR+FL++ + D+N NPLG
Sbjct: 142 GGPLRPQLKENYHYVLIPQEVWDALLIWYGGGPTIARFVVQVGDPELGNAFNRVQVYPEQPQDE---EPEVTTNG---TKDSSMQKKSE---------------------------------------------------------VNGNKEDSGDG-AKLAVQRKPVAVSSSIPKI-CGACRKTTGSLKRCGNCQLIWYCGANCQMSHWKYHKGVCRSTLTAEEKEDDILQGLQAERRGKMGLRNLGNTCFMNSALQCLSHVELLTRYFLSNQYKKDLNRDNPLG 362
BLAST of mRNA_F-serratus_M_contig891.20283.1 vs. uniprot
Match: A0A5D6XTB0_9STRA (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XTB0_9STRA) HSP 1 Score: 122 bits (306), Expect = 8.730e-27 Identity = 88/286 (30.77%), Postives = 123/286 (43.01%), Query Frame = 1
Query: 271 PGT------GRRLRVRLVRGYHFVVVPQEAWKALHAWYGGGPALPRLLVPVQDGASGIIVHEPQLYPEFSRLDP-VLRPTVKASRSAHTLDANLLPEARSAAATIAVKNDGSYRGLLANGNPTNPANPSTXXXXXXXXXXXXXXXXXXXXXXXXXLTNGMKGGAESGKAKAKVEMHP-CSSCGRPTKYKCNSCMKNANRVFYCSKSCQAAHWRYHKGYCGRRDS------EEALTFAKRCKAGLNNLGNTCFLNSAVQCLSHVQPLTRHFLTDAFLVDVNTTNPLG 1086
PGT G LR +L YH+V++PQEAW AL WYGGGP + R +V V D G Q+YPE + + L+ T + +++ P P P +P+ K E A V + C +C R T C N ++YC +CQ +HW+YHK C + ++ +R K GL NLGNTCF+NSA+QCLSHV+ LT +FL++ + D+N NPLG
Sbjct: 134 PGTALDELMGGPLRPQLRENYHYVLIPQEAWDALLCWYGGGPTIARFVVEVGDPTLGNAFKMVQVYPEQAEAEAEALKNTATNKTAVKATVSHVAPA------------------------PGKPLSPNA------------------------------KSSVERRAVPASVSVPKICGAC-RSTAGSLKRC-GNCQLIWYCGAACQTSHWKYHKAACKAATASAGDMAQDGAAEERRGKMGLRNLGNTCFMNSALQCLSHVELLTSYFLSNRYQKDLNRDNPLG 363
BLAST of mRNA_F-serratus_M_contig891.20283.1 vs. uniprot
Match: K3WVW9_GLOUD (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WVW9_GLOUD) HSP 1 Score: 121 bits (304), Expect = 1.640e-26 Identity = 88/279 (31.54%), Postives = 124/279 (44.44%), Query Frame = 1
Query: 280 GRRLRVRLVRGYHFVVVPQEAWKALHAWYGGGPALPRLLVPVQDGASGIIVHEPQLYPEFSRL--DPVLRPTVKASRSAHTLDANLLPEARSAAATIAVKNDGSYRGLLANGNPTNPANPSTXXXXXXXXXXXXXXXXXXXXXXXXXLTNGMKGGAESGKAKAKVEMHPCSSCGRPTKYKCNSCMKNANRVFYCSKSCQAAHWRYHKGYCGRRDS--------EEALTFAKRCKAGLNNLGNTCFLNSAVQCLSHVQPLTRHFLTDAFLVDVNTTNPLG 1086
G LR +L YH+V++PQE W AL WYGGGP + R ++ V D G + Q+YPE + + D ++ P K +A + + P VK+ + + P +P P GA C S P K +C SC ++YC +CQ +HW+YHK C S +E +R K GL NLGNTCF+NSA+QCLSHV+ LT +FL++ + D+N NPLG
Sbjct: 153 GGPLRSQLKENYHYVLLPQEVWDALLCWYGGGPTIARFVMEVGDPTLGNSFKQVQVYPEQADIEADALVAPGEKIKVNASSQSGKMSPSG--------VKSSVQRKPV-----PASPLIPKIC-------------------------------GA-------------CRSTTGPLK-RCGSCQL----IWYCGAACQTSHWKYHKTVCRSATSSEDKEAMIQEGSAEERRGKMGLRNLGNTCFMNSALQCLSHVEILTSYFLSNQYQKDLNKDNPLG 369 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig891.20283.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig891.20283.1 >prot_F-serratus_M_contig891.20283.1 ID=prot_F-serratus_M_contig891.20283.1|Name=mRNA_F-serratus_M_contig891.20283.1|organism=Fucus serratus male|type=polypeptide|length=364bp TADNAEAIEGGATGAGGEGSGEDDGDPAVTAPAAARENGDSATQGVRCGDback to top mRNA from alignment at F-serratus_M_contig891:219085..223775- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig891.20283.1 ID=mRNA_F-serratus_M_contig891.20283.1|Name=mRNA_F-serratus_M_contig891.20283.1|organism=Fucus serratus male|type=mRNA|length=4691bp|location=Sequence derived from alignment at F-serratus_M_contig891:219085..223775- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig891:219085..223775- >mRNA_F-serratus_M_contig891.20283.1 ID=mRNA_F-serratus_M_contig891.20283.1|Name=mRNA_F-serratus_M_contig891.20283.1|organism=Fucus serratus male|type=CDS|length=2184bp|location=Sequence derived from alignment at F-serratus_M_contig891:219085..223775- (Fucus serratus male)back to top |