mRNA_F-serratus_M_contig891.20282.1 (mRNA) Fucus serratus male
|
Overview
Homology
BLAST of mRNA_F-serratus_M_contig891.20282.1 vs. uniprot
Match: A0A6H5L229_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L229_9PHAE) HSP 1 Score: 841 bits (2173), Expect = 8.660e-282 Identity = 425/639 (66.51%), Postives = 497/639 (77.78%), Query Frame = 2
Query: 2 DLWFGTGSSVSPFGLKNAIAKFAPQFMGYSQQDCQEVLSFLLDGLHEDLNRVFEKPYLALPDGECGRPDDVIAAEAWDMFKMRDRSVLVDNLYGQFKSTLECQQCGKVSRKFDEFNVMPVELLDAQPLHVMMDFAPLL---------KSSASGSHKQDGTPNAGWILGGPGSEGRRQRRIGVLLPRDALVADLKEELAAMFKIGVDEMVIVVVPETGPLFYRVLPDTSEVKYFTQG-YEITAHECVPNQRHALVINRVFEGARHLQSFDEGMETEDPLIQWAEGVRRLSKLRFGDREAPFLLSFPHDVSCLGLLELVWDYMGDFLHLPEEEHKA--LGPRLAKSGLVKVSEAGDGFTPGLTP---------ERADAENGVILTEIGRYVPPTERVSAAAVLDTR--------------GGKWQSLDFLRFEWSGLLLGKMNVARINEP-FGADNHVSLHETSQRAKRVSLQDCLEKFSVPETLCEDNSWYCGNCKTLRQVLHFHSASCCLQAVKTIQVWSLPEVLVIHFKRFSHTGPSRRKVELFVDFPIDALDMSPYCRGETLEGGRPMSALYDLFAVSNHMGAMAHGHYTAFVRDWEGGGMSSKWHMCDDHECRPMHESRVCTSHAYVLFYRRRPLA 1810
+LWFG+GSSVSP GLK+AIAKFAPQF GYSQQD QEVLSFLLDGLHEDLNRV +KPYL LPDGECGRPD +IAAE+W+MF MRD+SVLV++LYGQFKSTLECQQCGK+SRKFDEFNVMPVELLD Q L V++DFAPLL K++A G K G +A +LGGPG EGR+ RR+ VL+P+++LVAD+K ELA MF IGVDEMVIVV P +G F+R+LPD++++ FTQG YEITAHECVP QRHALV+NRVF+G RH+ S EG DPL QWA+ V LS+LR DR+APFLLSFP DVSCLGLLE+VWDYM DFLHL ++E+ LG LA SG +KVSEA + F+P + +R DA NGV+++++GR++PPT+ V AA VL R GG+ Q LD LR EWSG LL +N +RI+ FG DNH S+ +T+ RAKRVSLQDCL+KFSVPETLC+DNSWYC CK LRQ AVKTIQVWSLPEVL++HFKRFSH GP+R KVELFVDFPI+ LDMSPYCRGETLEGGRPMSALYDLFAVSNHMG M HGHYTAFVRDWEG GMS WH+CDDH+CRP+ E+RV T+HAYVLFYRRRPLA
Sbjct: 1069 ELWFGSGSSVSPSGLKSAIAKFAPQFNGYSQQDSQEVLSFLLDGLHEDLNRVLKKPYLTLPDGECGRPDSIIAAESWEMFGMRDKSVLVESLYGQFKSTLECQQCGKLSRKFDEFNVMPVELLDGQRLQVILDFAPLLNPSAAPTAAKAAAGGDGKGGGNLSAAMLLGGPGVEGRKPRRVAVLVPKESLVADVKAELAVMFDIGVDEMVIVVSPISGQPFFRILPDSAQILPFTQGGYEITAHECVPGQRHALVVNRVFDGGRHVSS-PEGPRAIDPLAQWAQ-VSALSRLRGNDRDAPFLLSFPEDVSCLGLLEIVWDYMRDFLHLTKQEYDDDHLGHTLASSGHIKVSEASEFFSPMVVQYDQRQMQWQDRLDAHNGVVVSDLGRFIPPTDAVRAADVLRRRQQQQPQGVILQDLCGGRVQDLDILRLEWSGFLLDNLNESRIHHQCFGEDNHSSVQDTALRAKRVSLQDCLQKFSVPETLCKDNSWYCSRCKELRQ------------AVKTIQVWSLPEVLILHFKRFSHAGPNRGKVELFVDFPINGLDMSPYCRGETLEGGRPMSALYDLFAVSNHMGGMGHGHYTAFVRDWEGSGMSQDWHVCDDHDCRPVPEARVRTAHAYVLFYRRRPLA 1693
BLAST of mRNA_F-serratus_M_contig891.20282.1 vs. uniprot
Match: D7FSH2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSH2_ECTSI) HSP 1 Score: 427 bits (1099), Expect = 7.330e-128 Identity = 216/312 (69.23%), Postives = 253/312 (81.09%), Query Frame = 2
Query: 2 DLWFGTGSSVSPFGLKNAIAKFAPQFMGYSQQDCQEVLSFLLDGLHEDLNRVFEKPYLALPDGECGRPDDVIAAEAWDMFKMRDRSVLVDNLYGQFKSTLECQQCGKVSRKFDEFNVMPVELLDAQPLHVMMDFAPLL---------KSSASGSHKQDGTPNAGWILGGPGSEGRRQRRIGVLLPRDALVADLKEELAAMFKIGVDEMVIVVVPETGPLFYRVLPDTSEVKYFTQG-YEITAHECVPNQRHALVINRVFEGARHLQSFDEGMETEDPLIQWAEGVRRLSKLRFGDREAPFLLSFPHDVSCLG 907
+LWFG+GSSVSP GLK+AIAKFAPQF GYSQQD QEVLSFLLDGLHEDLNRV +KPYL LPDGECGRPD +IAAE+W+MF MRD+SVLV++LYGQFKSTLECQQCGK+SRKFDEFNVMPVELLD Q L V++DFAPLL K++A K G +A +LGGPG EGR+ RR+ VL+P+++LVAD+K ELA MF IGVDEMVIVV P +G F R+LPD++++ FTQG YEITAHECVP QRHALV+NRVF+G RH+ S EG +PL QWA+ V LS+LR DR+APFLLSFP DVSCLG
Sbjct: 1018 ELWFGSGSSVSPSGLKSAIAKFAPQFNGYSQQDSQEVLSFLLDGLHEDLNRVLKKPYLTLPDGECGRPDSIIAAESWEMFGMRDKSVLVESLYGQFKSTLECQQCGKLSRKFDEFNVMPVELLDGQRLQVILDFAPLLNPSAAPTAAKAAAGDDGKGVGNLSAAMLLGGPGVEGRKPRRVAVLVPKESLVADVKAELAVMFDIGVDEMVIVVSPVSGQPFLRILPDSAQILPFTQGGYEITAHECVPGQRHALVVNRVFDGGRHVSS-PEGPRAINPLPQWAQEVSALSRLRGNDRDAPFLLSFPEDVSCLG 1328
BLAST of mRNA_F-serratus_M_contig891.20282.1 vs. uniprot
Match: D7G6L3_ECTSI (USP domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6L3_ECTSI) HSP 1 Score: 308 bits (788), Expect = 1.120e-95 Identity = 142/183 (77.60%), Postives = 156/183 (85.25%), Query Frame = 2
Query: 1262 SLHETSQRAKRVSLQDCLEKFSVPETLCEDNSWYCGNCKTLRQVLHFHSASCCLQAVKTIQVWSLPEVLVIHFKRFSHTGPSRRKVELFVDFPIDALDMSPYCRGETLEGGRPMSALYDLFAVSNHMGAMAHGHYTAFVRDWEGGGMSSKWHMCDDHECRPMHESRVCTSHAYVLFYRRRPLA 1810
++ +T+ RAKRVSLQDCL+KFSVPETLCEDNSWYC CK LRQ AVKTIQVWSLPEVL++HFKRFSH GP+R KVELFVDFPI+ LDMSPYCRGETLEGGRPMSALYDLFAVSNHMG M HGHYTAFVRDWEG GMS WH+CDDH+CRP+ E+RV T+HAYVLFYRRRPLA
Sbjct: 5 TVQDTALRAKRVSLQDCLQKFSVPETLCEDNSWYCSRCKELRQ------------AVKTIQVWSLPEVLILHFKRFSHAGPNRGKVELFVDFPINGLDMSPYCRGETLEGGRPMSALYDLFAVSNHMGGMGHGHYTAFVRDWEGSGMSQDWHVCDDHDCRPVPEARVRTAHAYVLFYRRRPLA 175
BLAST of mRNA_F-serratus_M_contig891.20282.1 vs. uniprot
Match: A0A7S2A1U5_9STRA (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2A1U5_9STRA) HSP 1 Score: 277 bits (709), Expect = 3.370e-76 Identity = 204/635 (32.13%), Postives = 295/635 (46.46%), Query Frame = 2
Query: 2 DLWFG--TGSSVSPFGLKNAIAKFAPQFMGYSQQDCQEVLSFLLDGLHEDLNRVFEKPYLALPDGECGRPDDVIAAEAWDMFKMRDRSVLVDNLYGQFKSTLECQQCGKVSRKFDEFNVMPVELLDAQPLHVMMDFAPLL--KSSASGSHKQDGTPNAGWILGGPGSEGRRQRRIGVLLPRDALVADLKEELAAMFKIGVDEMVIVVVPETGPLFYRVLPDTSEVKYFTQGYEITAHECVPNQRHALVINRVFEGARHLQSFDEGMETEDPLIQWAEGVRRLSKLRFGDREAPFLLSFPHDVSCLGLLELVWDYMGDFLHLP---EEEHKALGPRLAKSGLVKVSEAGDGFTPGLTPERADAENGVILTEIGRYVPPTERVSAAAVLDTRGGKWQSLDFLRFEWSGLLLGKMNVARINEPFGADNHVSLHETSQRAKRVSLQDCLEKFSVPETLCEDNSWYCGNCKTLRQVLHFHSASCCLQAVKTIQVWSLPEVLVIHFKRFSHTGPSRR-KVELFVDFPIDALDMSPYC-------RGE---TLEGGRP-----------------MSALYDLFAVSNHMGAMAHGHYTAFVRDWEGGGMSSKWHMCDDHECRPMHESRVCTSHAYVLFYRRR 1801
++W G + +SP LK A+A FAP+F G SQ D E L++LLDGLHEDLNRV PY+ +PD G+ + AEAWD ++ R+ S+++D YGQFKST C +C KVS F+ FN + +E+ Q + P+L +S+ +GS P R GV +P++ V D+K L+ + I ++ + V E Y +L D V ITA+E P + I+ + R F+ E+ G R L FG PFL SF ++C + +W + + P + K + RL + +++ + P ++ ++ + + +P A VL G + FL EWS ++L + + N +H SL V+L C E F+ PE L E+N WYC CK H ++A+KT+++W LP VLV+H KRF+ RR K++ FVDFP+ LDMS +C RG T P + A+YDLFAV+NH G M GHYTA+ R W GMS +W DD + S V T AYVLFYRRR
Sbjct: 307 EVWLGGHKNACMSPTTLKRAVAVFAPRFAGVSQHDAMEFLAYLLDGLHEDLNRVKNAPYVEMPDATTGQRLSISGAEAWDAYRRRNDSLVMDTFYGQFKSTCVCPRCSKVSVSFETFNHVSLEIPQQQ---ITTRTIPVLFFRSAPAGSANTRLVP----------------LRYGVQVPKNGCVGDIKHALSGLCGIKPTQLALCDVYENS--IYEILRDGKAVSTIRPDDFITAYEVDPYTN--VSIHAIATHTRGDTKFNASNTNEEG------GERNL----FG---YPFLTSFDARMTCTKVWNHIWRQVSRLVPWPAGVDGNSKPIIERLKSALTIRIVDNSGKPRPVFAKKQVESS---AMLDAASILPCNSNAKIADVLG--GDCTERFLFLSLEWSDIILDGLKLIDENRFLAFSDHASL--------LVTLDQCFETFTRPERLDENNMWYCSRCKE-------H-----VRAMKTMELWKLPNVLVVHLKRFAFKHALRREKLDAFVDFPLQELDMSRHCASSSSYTRGSISPTSNSASPGQSSMNDDNGENFVVDNVPAIYDLFAVTNHYGRMGFGHYTAYARKWNEDGMSDQWAAFDDSNVGGIKPSMVVTPAAYVLFYRRR 880
BLAST of mRNA_F-serratus_M_contig891.20282.1 vs. uniprot
Match: A0A8K1CPI0_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CPI0_PYTOL) HSP 1 Score: 272 bits (696), Expect = 2.190e-74 Identity = 190/605 (31.40%), Postives = 281/605 (46.45%), Query Frame = 2
Query: 2 DLWFGTGSSVSPFGLKNAIAKFAPQFMGYSQQDCQEVLSFLLDGLHEDLNRVFEKPYLALPDGECGRPDDVIAAEAWDMFKMRDRSVLVDNLYGQFKSTLECQQCGKVSRKFDEFNVMPVELLDAQPLHVMMDFAPLLKSSASGSHKQDGTPNAGWILGGPGSEGRRQRRIGVLLPRDALVADLKEELAAMFKIGVDEMVIVVVPETGPLFYRVLPDTSEVKYFTQGYEITAHECVPNQRHALVINRVFEGARHLQSFDEGMETEDPLIQWAEGVRRLSKLRFGDREAPFLLSFPHDVSCLGLLELVWDYMGDFLHLPEEEHKALGPRLAKSGLVKVSEAGDGFTPGLTPERADAENGVILTEIGRYVPPTERVSAAAVLDTRGGKWQSLDFLRFEWSGLLLGKMNVARINEPFGADNHVSLHETSQRAKR--VSLQDCLEKFSVPETLCEDNSWYCGNCKTLRQVLHFHSASCCLQAVKTIQVWSLPEVLVIHFKRFSHTGPSRR-KVELFVDFPIDALDMSPYCRGETLEGGRPMSALYDLFAVSNHMGAMAHGHYTAFVRDWEGGGMSSKWHMCDDHECRPMHESRVCTSHAYVLFYRRRPL 1807
+LWFGT S+SP GLK AI +FAPQF G+ Q D QE+L++LLDGLHEDLNRV +KPY + + + + D +A EAW +R+ S+ VD++ GQFKST+ C C KVS FD FN + +EL P+ ++ + +G++ R V +P+ + LK ++ + I M+ + ++ YRV+ DT + I + P +G E + PL + RL GD P L +F + +C +LE W M + + K L +L+ S L + + +G + T R A L+ G + L ++ WS LL R + AD+ + + R +SL DC F+ PETL + N WYC CK RQ A KT+++W LP+VL++ KRF + R K++ FVDFP++ LDM+ +C +T + P YDLFAVSNH G+M GHYTAF R W+ W+ DD + P +V ++ AY+LFY+RR L
Sbjct: 361 ELWFGTSPSISPAGLKRAIGRFAPQFSGFQQHDSQELLAYLLDGLHEDLNRVKQKPYTEVKESDGKQDDAEVAQEAWKRHLLRNDSIFVDHVQGQFKSTVVCPICSKVSITFDPFNCVQLEL----PIQQNRRMEAIVVA-----------------------KGKQMMRYWVEVPKKGNILSLKRAVSKLSGIPAHLMIATDIYQS--TVYRVISDTERLAMLRDEDRILLYHVEPPTP---------------PPSSDGSEPQ-PLY-YGFLYHRLDTALKGD---PLLFTFTAETTCEEMLE-TWSEM---IAAHVAQTKGLTSKLSASLLATCTYLSN-------------RDGAFMRSEAVPASKTSRFLDYATLNPDEGL-EDLVYMSISWSPALLNSPGGPRPDVEHVADHESMREHAAHKGTRDGISLYDCFRNFTKPETLDQANLWYCSKCKEHRQ------------ARKTMEIWKLPDVLIVSLKRFEYRNEILRDKLDAFVDFPLEDLDMTSFCLEKTED---PERLRYDLFAVSNHYGSMGFGHYTAFARSWQNSDKYPGWYSFDDSQVSPAMPGQVKSNAAYILFYKRRQL 883
BLAST of mRNA_F-serratus_M_contig891.20282.1 vs. uniprot
Match: A0A6G0X5X4_9STRA (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X5X4_9STRA) HSP 1 Score: 268 bits (685), Expect = 6.130e-73 Identity = 196/606 (32.34%), Postives = 286/606 (47.19%), Query Frame = 2
Query: 2 DLWFGTGSSVSPFGLKNAIAKFAPQFMGYSQQDCQEVLSFLLDGLHEDLNRVFEKPYLALPDGECGRPDDVIAAEAWDMFKMRDRSVLVDNLYGQFKSTLECQQCGKVSRKFDEFNVMPVELLDA--QPLHVMMDFAPLLKSSASGSHKQDGTPNAGWILGGPGSEGRRQRRIGVLLPRDALVADLKEELAAMFKIGVDEMVIVVVPETGPLFYRVLPDTSEVKYFTQGYEITAHECVPNQRHALVINRVFEGARHLQSFDEGMETEDPLIQWAEGVRRLSKLRFGDREAPFLLSFPHDVSCLGLLELVWDYMGDFLHLPEEEHKALGPRLAKSGLVKVSEAGDGFTPGLTPERADAENGVILTEIGRYVPPTERVSAAAVLDTRGGKWQSLDFLRFEWSGLLLGKMNVARINEPFGADNHVSLHETSQRAKRVSLQDCLEKFSVPETLCEDNSWYCGNCKTLRQVLHFHSASCCLQAVKTIQVWSLPEVLVIHFKRFSHTGPS-RRKVELFVDFPIDALDMSPYCRGETLEGGRPMSALYDLFAVSNHMGAMAHGHYTAFVRDWEGGGMSSKWHMCDDHECRPMHESRVCTSHAYVLFYRRRPLA 1810
+LWFGT SSVSP LK AI +APQF GY Q D QE+L++LLDGLHED+NR+ +KPY+ + D +PD +AA AW ++R+ S+ VD L+GQFKS + C +C K+S FD FN + +EL A +PL V++ PLL +A K R + GV + + V +K LA + G +V+ + YRVLPD V + + P + ++ F R L E DPLI + E + + LG + L ++ E K RL G +K A F P+ +++ I G + + + DT +L +W L N+ ++ EP+ NH S+ + + ++L DC +KF+ PE L +DN WYC CK RQ A KT+Q++ LP+VL++ KRF + R K++ VDFP+D L+M+PYC LYDL+AV+NH G+M GHYTAF +D ++ W+ DD M S V ++ AY+LFY+RR A
Sbjct: 353 ELWFGTASSVSPALLKRAIGTYAPQFSGYQQHDAQELLAYLLDGLHEDVNRIQKKPYIEVEDSNGSQPDVAVAARAWANHRLRNESIFVDQLHGQFKSKVVCPKCDKISITFDPFNCVQLELPHAVTRPLEVIV--MPLLTRAAVLDEKNP----------------LRPMKYGVQIHKRGNVKSIKMALA---EAGCPYSNMVLCDVFNHMVYRVLPDVERVVRIRPDDRLVLYPQPPKTANCIL----FCYHRFLDKKKEPNLFGDPLILYLEKHTTIDEF-------------------LGQVVL---HLIPLFGWNASERKR---RLDDEGALKQLLAKHIFVT--NPDGVNSKPQAICEYEG-FERTANAMETLRLNDT--------SYLGIDWEDEL---QNLYQVAEPY-IQNHASMKSLRVKTEGLTLDDCFKKFTSPEQLDQDNLWYCSTCKEHRQ------------ATKTMQLYKLPDVLILSLKRFEYRNEVVRDKLDTMVDFPLDGLNMAPYCLSADDNSDE---FLYDLYAVTNHFGSMGFGHYTAFAKD----KATNLWYTFDDSTVTAMPASNVVSNAAYILFYKRRRAA 874
BLAST of mRNA_F-serratus_M_contig891.20282.1 vs. uniprot
Match: A0A1V9YKT0_9STRA (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YKT0_9STRA) HSP 1 Score: 265 bits (676), Expect = 7.470e-72 Identity = 185/602 (30.73%), Postives = 288/602 (47.84%), Query Frame = 2
Query: 2 DLWFGTGSSVSPFGLKNAIAKFAPQFMGYSQQDCQEVLSFLLDGLHEDLNRVFEKPYLALPDGECGRPDDVIAAEAWDMFKMRDRSVLVDNLYGQFKSTLECQQCGKVSRKFDEFNVMPVELLDAQPLHVMMDFAPLLKSSASGSHKQDGTPNAGWILGGPGSEGRRQRRIGVLLPRDALVADLKEELAAMFKIGVDEMVIVVVPETGPLFYRVLPDTSEVKYFTQGYEITAHECVPNQRHALVINRVFEGARHLQSFDEGMETEDPLIQWAEGVRRLSKLRFGDREAPFLLSFPHDVSCLGLLELVWDYMGDFLHLPEEEHKALGPRLAKSGLVKVSEAGDGFTPGLTPERADAENGVILTEIGRYVPPTERVSAAAVLDTRGGKWQSLDFLRFEWSGLLLGKMNVARINEPFGADNHVSLHET-SQRAKRVSLQDCLEKFSVPETLCEDNSWYCGNCKTLRQVLHFHSASCCLQAVKTIQVWSLPEVLVIHFKRFSHTGPS-RRKVELFVDFPIDALDMSPYCRGETLEGGRPMSALYDLFAVSNHMGAMAHGHYTAFVRDWEGGGMSSKWHMCDDHECRPMHESRVCTSHAYVLFYRRR 1801
+LWFGT +SV+P LK ++A++APQF GY Q D QE+L++LLDGLHED+NRV +KPY+ + + +PD+VIA +AW MR++S+ V+ + GQFKST+ C C ++S FD FNV+ +EL + ++ + P L + D T + G + V +P+ V +K+ L A G + V+ + YRVLPD V + ++ P +R +G PL FGD P LLS+ +C E +W + + L + G + A L+K+ A F + A+ V L + + P S + +W+G L + N P D H S + + + ++L DC +KF+ PE L EDN WYC CK RQ A KT++++ LP VL++ KRF + R K+++ VDFP++ LDM+P+C T EG +YDL+AV+NH G+M GHYTA+ +D + ++ W+ DD P+ ++ ++ AY+L+Y+RR
Sbjct: 346 ELWFGTATSVTPSTLKRSLARYAPQFSGYQQHDAQELLAYLLDGLHEDVNRVLKKPYIEIQESNGTQPDEVIAKQAWHNHCMRNQSIFVEEMQGQFKSTVVCPTCARISITFDPFNVIQLELPNDANRYLEVLSVPHLTQTMH----LDKTVHLG------------PTQFRVAVPKRGSVTHVKKALEAF---GCIKKQYVLCDVYQSMVYRVLPDAERVARIRSDDRLVCYDVPPGSGVVFCYHR------------KGDSLPAPL--------------FGD---PILLSYTPTTTCE---EFMWSLVYQVIPLVALDESEGGAKKAHVRLLKLL-AKHVFLA--NQDGANVPGAVSLDDWNAFQPGATMASVGL---------SDCAYFAIDWTGDL-------KYNGP-SIDIHASAVQVKATKTNGLTLADCFKKFTSPEELDEDNLWYCNVCKEQRQ------------ATKTMELYKLPNVLILSLKRFEYRNEVVREKLDMMVDFPLEGLDMAPFCLS-TKEG-----MVYDLYAVTNHYGSMGFGHYTAYAKDHD----TNLWYTFDDSSVTPVSAAQTVSNAAYILYYKRR 854
BLAST of mRNA_F-serratus_M_contig891.20282.1 vs. uniprot
Match: H3GWC2_PHYRM (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GWC2_PHYRM) HSP 1 Score: 263 bits (671), Expect = 6.460e-71 Identity = 198/615 (32.20%), Postives = 284/615 (46.18%), Query Frame = 2
Query: 2 DLWFGTGSSVSPFGLKNAIAKFAPQFMGYSQQDCQEVLSFLLDGLHEDLNRVFEKPYLALPDGECGRPDDVIAAEAWDMFKMRDRSVLVDNLYGQFKSTLECQQCGKVSRKFDEFNVMPVELLDAQPLHVMMDFAPLLKSSASGSHKQDGTPNAGWILGGPGSEGRR-QRRIGVLLPRDALVADLKEELAAMFKIGVDEMVIVVVPETGPLFYRVLPDTSEVKYFTQGYEITAHECVPNQRHALVINRVFEGARHLQSFDEGMETEDPLIQWAEGVRRLSKLRFGDREAPFLLSFPHDVSCLGLLELVWDYMGDFLHLPEEEHKALGPRLAKSGLVKVSEAGDGFTPGLTPERADAENGVILTEIGRYVPPTERVSAAAVLDTRGGKWQSLDFLRFEWSGLLLGKMNVARINEPFGADNHVSLHETSQRAKR--------VSLQDCLEKFSVPETLCEDNSWYCGNCKTLRQVLHFHSASCCLQAVKTIQVWSLPEVLVIHFKRFSHTGPSRR-KVELFVDFPIDALDMSPYCRGETLEGGRPMSAL-YDLFAVSNHMGAMAHGHYTAFVRDWEGGG--MSSKWHMCDDHECRPMHESRVCTSHAYVLFYRRRPL 1807
+LWFGT S SP LK AI++FAPQF G+ Q D QE+L++++DGLHEDLNRV KPY + + + + D +A EAW +R+ S+ VD++ GQFKST+ C C KVS FD FN + +EL Q + + F P +E R+ R V +P+ V LK L+ + + ++ + ++ + YR++ DT +NR+ E R L + M TE+P++ + R+ GD P L ++ +C +LE W + H+ + KA P S V +++ +GV L + + S A L L F WS +L R D ++ S RAK +SL DC F ETL + N WYC CK RQ A KT+++W LP+VLV+ KRF + R K+++FVDFP+++LDMSPYC LE L YDLFAVSNH G+M GHYTAF + W+ G M W+ DD P S+V ++ AY+LFY+RR L
Sbjct: 363 ELWFGTVPSTSPANLKRAISRFAPQFSGFQQHDAQELLAYIIDGLHEDLNRVKHKPYTEVKESDGSQDDATVAKEAWGRHLLRNDSIFVDHVQGQFKSTVVCPLCNKVSITFDPFNCIQLELPQQQNRQIEVIFVP--------------------------TEARKPMTRYLVEVPKKGSVLLLKRALSKLSGVSPSSLLAADIYQS--MTYRIIGDTER------------------------LNRLREDDRILMYQVDYMPTEEPVL-YGFLYHRVGSTLTGD---PLLFAYTASSTCAEMLEK-WSALLS-THVSQAS-KAKIPSNMLSQCVYLTD----------------RDGVYLRNEPVPLASDAKFSDFATLHDEDSP-DELVFASVAWSSSMLSSSASPR------PDVEQIVNHESMRAKAGGSRAHEGISLDDCFRNFVKSETLDQANLWYCSKCKEHRQ------------ARKTMEMWRLPDVLVLSLKRFEYRNEVLRDKLDVFVDFPLESLDMSPYC----LEKSSDKDHLTYDLFAVSNHYGSMGFGHYTAFAKSWKDGDGEMFPGWYSFDDSLVTPAMPSQVKSNAAYILFYKRRNL 879
BLAST of mRNA_F-serratus_M_contig891.20282.1 vs. uniprot
Match: A0A6A3P1V5_9STRA (Ubiquitin carboxyl-terminal hydrolase n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A3P1V5_9STRA) HSP 1 Score: 262 bits (670), Expect = 1.040e-70 Identity = 193/614 (31.43%), Postives = 278/614 (45.28%), Query Frame = 2
Query: 2 DLWFGTGSSVSPFGLKNAIAKFAPQFMGYSQQDCQEVLSFLLDGLHEDLNRVFEKPYLALPDGECGRPDDVIAAEAWDMFKMRDRSVLVDNLYGQFKSTLECQQCGKVSRKFDEFNVMPVELLDAQPLHVMMDFAPLLKSSASGSHKQDGTPNAGWILGGPGSEGRRQRRIGVLLPRDALVADLKEELAAMFKIGVDEMVIVVVPETGPLFYRVLPDTSEVKYFTQGYEITAHECVPNQRHALVINRVFEGARHLQSFDEGMETEDPLIQWAEGVRRLSKLRFGDREAPFLLSFPHDVSCLGLLELVWDYMGDFLHLPEEEHKALGPRLAKSGLVKVSEAGDGFTPGLTPERADAENGVILTEIGRYVPPTERVSAAAVLDTRGGKWQSLDFLRFEWSGLLLG-----KMNVARINEPFGADNHVSLHETSQRAKR---VSLQDCLEKFSVPETLCEDNSWYCGNCKTLRQVLHFHSASCCLQAVKTIQVWSLPEVLVIHFKRFSHTGPSRR-KVELFVDFPIDALDMSPYCRGETLEGGRPMSAL-YDLFAVSNHMGAMAHGHYTAFVRDWEGGG--MSSKWHMCDDHECRPMHESRVCTSHAYVLFYRRRPL 1807
+LWFGT S SP LK AI++FAPQF G+ Q D QE+L++++DGLHEDLNRV KPY + + + + D +A EAW+ +R+ S+ VD++ GQFKST+ C C KVS FD FN + +EL Q + + F P G+ R V +P+ + LK LA + GV ++ + YR + DT +NR+ E R L + M T D +Q+ R+ GD P L ++ +C +LE D + + ++ A P S V +S D + + E + + A + D L + WS +L + +V RI NH S+ S ++ +SL DC F ETL + N WYC CK RQ A KT+++W LP+VLV+ KRF + R K++++VDFP++ LDMSPYC LE L YDLFAVSNH G+M GHYTAF + W+ G M W+ DD P +V ++ AY+LFY+R+ L
Sbjct: 381 ELWFGTVPSTSPGNLKRAISRFAPQFSGFQQHDAQELLAYIIDGLHEDLNRVKHKPYTEVKESDGSQDDAAVAKEAWERHLLRNNSIFVDHVQGQFKSTVVCPVCNKVSITFDPFNCIQLELPQQQNRQIEVIFVP-------------------------SEPGKSMTRYLVEVPKKGSILLLKRALAKLC--GVSPSALLAADVYQSMTYRTIGDTER------------------------LNRLREDDRILMYQVDYMPTNDS-VQYGFLYHRVGSSLTGD---PLLFTYTASSTCAEMLEKWSDLLSSHV---SQKSSAKIPSNMLSQCVYLS---------------DRDGMYLRNEPVPFAADAKFSDFATLHDDESS--DELVYATVAWSSSMLSSSASPRPDVERIV------NHESMRGKSSGSRAHEGISLDDCFRNFVKSETLDQANLWYCSKCKEHRQ------------ARKTMEMWRLPDVLVLSLKRFEYRNEILRDKLDVYVDFPLEGLDMSPYC----LEKSSDKDHLSYDLFAVSNHYGSMGFGHYTAFAKSWKDGDGEMFPGWYSFDDSLVAPAMPGQVKSNAAYILFYKRKNL 897
BLAST of mRNA_F-serratus_M_contig891.20282.1 vs. uniprot
Match: A0A3R7KGE9_9STRA (Ubiquitin carboxyl-terminal hydrolase n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7KGE9_9STRA) HSP 1 Score: 261 bits (667), Expect = 1.470e-70 Identity = 188/611 (30.77%), Postives = 277/611 (45.34%), Query Frame = 2
Query: 2 DLWFGTGSSVSPFGLKNAIAKFAPQFMGYSQQDCQEVLSFLLDGLHEDLNRVFEKPYLALPDGECGRPDDVIAAEAWDMFKMRDRSVLVDNLYGQFKSTLECQQCGKVSRKFDEFNVMPVELLDAQPLHVMMDFAPLLKSSASGSHKQDGTPNAGWILGGPGSEGRRQRRIGVLLPRDALVADLKEELAAMFKIGVDEMVIVVVPETGPLFYRVLPDTSEVKYFTQGYEITAHECVPNQRHALVINRVFEGARHLQSFDEGMETEDPLIQWAEGVRRLSKLRFGDREAPFLLSFPHDVSCLGLLELVWDYMGDFLHLPEEEHKALGPRLAKSGLVKVSEAGDGFTPGLTPERADAENGVILTEIGRYVPPTERVSAAAVLDTRGGKWQSLDFLRFEWSGLLLGKMNVARINEPFGADNHVSLHETSQRAKRVSLQDCLEKFSVPETLCEDNSWYCGNCKTLRQVLHFHSASCCLQAVKTIQVWSLPEVLVIHFKRFSHTGPSRR-KVELFVDFPIDALDMSPYCRGETLEGGRPMSALYDLFAVSNHMGAMAHGHYTAFVRDWEGGG--MSSKWHMCDDHECRPMHESRVCTSHAYVLFYRRRPLA*TITS 1825
+LWFGT S+SP LK AI++FAPQF G+ Q D QE+L++++DGLHEDLNRV KPY + + + + D V+A EAW +R+ S+ VD++ GQFKST+ C CGKVS FD FN + +EL Q + + F P G+ R V +P+ V LK L + GV+ ++ + YR++ DT + R+ E R L + + +Q+ R+ GD P L ++ +C +LE D + + A P S V +S+ +G+ L + + + A L + L F+ WS +L R + ++ +TS+ ++L DC F ETL + N WYC CK RQ A KT+++W LP+VLV+ KRF + R K++++VDFP++ LDMSPYC ++ G YDLFAVSNH G+M GHYTAF + W+ G M W+ DD S+V ++ AY+LFY+RR L T T
Sbjct: 339 ELWFGTVPSISPASLKRAISRFAPQFSGFQQHDAQELLAYIIDGLHEDLNRVKHKPYTEVNESDGSQDDAVVAKEAWKRHLLRNDSIFVDHVQGQFKSTVVCPVCGKVSITFDPFNCIQLELPQQQNRQIEVIFVP-------------------------SEPGQAMTRYVVEVPKKGSVLQLKRALGKLC--GVNPSALLAADIYQSMTYRIIGDTER------------------------LIRLREDDRILM-YQVDFKPTSESVQYGFLYHRVESTLTGD---PLLFTYTASTTCAEILEKWSDMLSTHV---SRMSSAKIPSNVLSQCVYLSD----------------RDGIYLRNEPVPLASDAKFADFASLQSEDSP-DELVFVSVAWSSSMLASSASPRPDVECIVNHESVRGKTSRTHDGIALDDCFRNFVKAETLDQANLWYCCKCKEHRQ------------ARKTMEMWRLPDVLVLSLKRFEYRNEILRDKLDVYVDFPLEGLDMSPYCLEKS---GDKDHLNYDLFAVSNHYGSMGFGHYTAFAKSWKDGDGEMYPGWYSFDDSLVTLAAPSQVKSNAAYILFYKRRNLQSTPTQ 859 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig891.20282.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig891.20282.1 >prot_F-serratus_M_contig891.20282.1 ID=prot_F-serratus_M_contig891.20282.1|Name=mRNA_F-serratus_M_contig891.20282.1|organism=Fucus serratus male|type=polypeptide|length=578bp MGYSQQDCQEVLSFLLDGLHEDLNRVFEKPYLALPDGECGRPDDVIAAEAback to top mRNA from alignment at F-serratus_M_contig891:201886..217617- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig891.20282.1 ID=mRNA_F-serratus_M_contig891.20282.1|Name=mRNA_F-serratus_M_contig891.20282.1|organism=Fucus serratus male|type=mRNA|length=15732bp|location=Sequence derived from alignment at F-serratus_M_contig891:201886..217617- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig891:201886..217617- >mRNA_F-serratus_M_contig891.20282.1 ID=mRNA_F-serratus_M_contig891.20282.1|Name=mRNA_F-serratus_M_contig891.20282.1|organism=Fucus serratus male|type=CDS|length=3468bp|location=Sequence derived from alignment at F-serratus_M_contig891:201886..217617- (Fucus serratus male)back to top |