mRNA_F-serratus_M_contig89.20264.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig89.20264.1 vs. uniprot
Match: D7FJN0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJN0_ECTSI) HSP 1 Score: 384 bits (986), Expect = 1.170e-124 Identity = 204/415 (49.16%), Postives = 267/415 (64.34%), Query Frame = 2
Query: 572 EGYPEMVVFGDSFSDSGRRFNAPASFDFE--GIGPFPWARLYEAKDSEETFDAYVPGRGSVTNGKVWTEYLHVPQDLNFATSSGRMTETFRALETCLGYTGEGEEFPTGNLAEQIDLYLHDVV----SRTDETLGYTHVIILGTNDFGAVVSAATRLAIAQTLRVLGALEEPYEDPIPSEKVFRF----------VGGIPQFDFEPAIAEIAGALSEGVERLIDAGVTGKILIGNIGSFRPSHGLAASGQAETFDHVALAAGTALQRVIDAYP-QLQLLDLYSLTAAIVDAPQVFTELGFREPQDAVKGDPVPLSTPCLKPDFFIDDNAEIMGTQALRAAGCQEECALCADSSSPCQNCFLGNPSAAICDDPDTRIFWDDIHFTTGVHRHFAAAVVECSKDFPDSARPFVEQLCP 1765
E P+MVVFGDS +D+GRRFNAPASF FE GIGPFPW RLY+ DS+E AY+P GSV+NGK W +L +P + NFATSSG T+ FR+ E C GYTGEGE+FPT L EQID Y +++V + DETL YTHVI +GTN+ VV A TR +I E YEDP+ +KVF G+P F P I E+ GA EG+ RLIDAGVTG+IL+ N+GS + G+A + A D VAL + + ++ Y Q+++LD+Y+L AA+VD +FT+LGF + ++ L+ C++ +FF+DD AEIMGTQALR CQEEC LCADS++PC CF+ P+ CDDP +++F+D IHFTT H F A+ +CSKD P+ RPFV +CP
Sbjct: 40 ENPPKMVVFGDSNADTGRRFNAPASFQFEDEGIGPFPWKRLYDGPDSDEKTAAYMPFEGSVSNGKAWPTWLRIPDEHNFATSSGSATDAFRSRERCTGYTGEGEDFPTATLEEQIDRYFYEIVDDASTTKDETLDYTHVIFIGTNELNRVVEAITRYSIGG---------EGYEDPVAFDKVFEVNATTGFPVLDESGLPVPTFAPMIEEVLGAWDEGIGRLIDAGVTGRILLANVGSPKGLAGIAGTETATVLDQVALFLRSGAELLVAKYAGQVRMLDMYTLFAALVDDESLFTDLGFTPGEGSL------LADSCIQFNFFVDDAAEIMGTQALRNPDCQEECMLCADSTTPCATCFVDQPAITKCDDPSSKVFYDGIHFTTDFHLIFGEAIRQCSKDSPNFDRPFVGVMCP 439
BLAST of mRNA_F-serratus_M_contig89.20264.1 vs. uniprot
Match: D7FJN5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJN5_ECTSI) HSP 1 Score: 379 bits (973), Expect = 2.580e-122 Identity = 201/411 (48.91%), Postives = 260/411 (63.26%), Query Frame = 2
Query: 572 EGYPEMVVFGDSFSDSGRRFNAPASFDF--EGIGPFPWARLYEAKDSEETFDAYVPGRGSVTNGKVWTEYLHVPQDLNFATSSGRMTETFRALETCLGYTGEGEEFPTGNLAEQIDLYLHDVVSRTDETLGYTHVIILGTNDFGAVVSAATRLAIAQTLRVLGALEEPYEDPIPSEKVFRF--VGGIPQFD--------FEPAIAEIAGALSEGVERLIDAGVTGKILIGNIGSFRPSHGLAASGQAETFDHVALAAGTALQRVIDAYP-QLQLLDLYSLTAAIVDAPQVFTELGFREPQDAVKGDPVPLSTPCLKPDFFIDDNAEIMGTQALRAAGCQEECALCADSSSPCQNCFLGNPSAAICDDPDTRIFWDDIHFTTGVHRHFAAAVVECSKDFPDSARPFVEQLCP 1765
E P+MVVFGDS SD+GRR+NAP SF +GIG FPW RLY+ DS+E AY+P GSV+NGK W +L +P + NFATSS T+ FR+ E C GYTGEGE+FPT L EQID Y +++V+ TDETL YTHVI +GTN+ VV A TR + E YEDP+ EKVF G P FD F P I E+ GA EG+ RLI AGVTG+IL+ N+GS + G+A + A D VA A Q ++ Y Q+++LDLY+L AA+VD +FT+LGF + ++ L+ C++ +FF+DD AEIMGTQALR CQEEC LCADS++PC C + P+ CDDP ++F+D +HFTT H F A+ +CSKD P+ RPFV +CP
Sbjct: 36 ENPPKMVVFGDSNSDTGRRYNAPNSFQLKEDGIGAFPWKRLYDGPDSDEKTSAYMPFEGSVSNGKAWPTWLRIPDEHNFATSSASATDAFRSRERCTGYTGEGEDFPTATLEEQIDRYFYEIVNETDETLDYTHVIFIGTNELNRVVEAITRYSTGG---------EGYEDPVAFEKVFEVDATTGFPVFDASGLPVPTFAPMIEEVLGAWDEGIGRLIGAGVTGRILLANVGSPKGLTGIAGTETAILLDSVAQALRVGAQLLVAKYSHQVRMLDLYTLFAALVDDESIFTDLGFTPGEGSL------LADSCIQVNFFVDDAAEIMGTQALRNPDCQEECTLCADSTTPCATCLVDQPAITKCDDPSNKVFYDGVHFTTDFHLIFGEAIRQCSKDSPNFDRPFVGVMCP 431
BLAST of mRNA_F-serratus_M_contig89.20264.1 vs. uniprot
Match: D7FYC5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYC5_ECTSI) HSP 1 Score: 368 bits (945), Expect = 1.460e-118 Identity = 196/415 (47.23%), Postives = 260/415 (62.65%), Query Frame = 2
Query: 572 EGYPEMVVFGDSFSDSGRRFNAPASFDFE--GIGPFPWARLYEAKDSEETFDAYVPGRGSVTNGKVWTEYLHVPQDLNFATSSGRMTETFRALETCLGYTGEGEEFPTGNLAEQIDLYLHDVV----SRTDETLGYTHVIILGTNDFGAVVSAATRLAIAQTLRVLGALEEPYEDPIPSEKVFRF--VGGIPQFD--------FEPAIAEIAGALSEGVERLIDAGVTGKILIGNIGSFRPSHGLAASGQAETFDHVALAAGTALQRVIDAYP-QLQLLDLYSLTAAIVDAPQVFTELGFREPQDAVKGDPVPLSTPCLKPDFFIDDNAEIMGTQALRAAGCQEECALCADSSSPCQNCFLGNPSAAICDDPDTRIFWDDIHFTTGVHRHFAAAVVECSKDFPDSARPFVEQLCP 1765
E P+MVV GDS SD+GRRFN PASF FE GIGPFPW R+Y+ DS+E AY+P GSVTNGKVW +L +P + NFATSS T+ FR+ E C GYTGEGE+FPT L EQID Y +++V + T++TL YTHVI +G N+ +A TR +I E Y+DP+ +KVF G+P D F P I E+ GA EG+ RLI AGVTG+IL+ N+GS + G+A + A D + L + + ++D Y Q+++LD+Y+L AA+VD +F +LGF + ++ L+ C++ +F +DD AEIMGTQALR CQEECALCADS++PC C + P+ CDDP T+IF+D IHFTT H A+ +CSKD P+ R FV LCP
Sbjct: 34 ENPPQMVVLGDSNSDTGRRFNTPASFQFEDEGIGPFPWKRVYDGPDSDEKTAAYMPFEGSVTNGKVWPTWLRIPDEHNFATSSATATDAFRSRERCTGYTGEGEDFPTATLEEQIDRYFYEIVDDTSTTTNDTLDYTHVIFIGINELIMAAAAVTRYSIGG---------EGYQDPVAFDKVFEVNATTGLPVLDENGLPVPTFTPMIEEVLGAWDEGIARLIGAGVTGRILLANVGSLKGLDGIAGTETATVLDQITLVLRSGAELLVDKYAGQVRMLDMYTLFAALVDDESIFLDLGFTPGEGSL------LAETCIQFNFVVDDAAEIMGTQALRNPDCQEECALCADSTTPCATCLVDQPAVTKCDDPSTKIFYDSIHFTTDFHLVLGEAIRQCSKDSPNFDRAFVGVLCP 433
BLAST of mRNA_F-serratus_M_contig89.20264.1 vs. uniprot
Match: D8LCE7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LCE7_ECTSI) HSP 1 Score: 354 bits (908), Expect = 3.690e-113 Identity = 192/397 (48.36%), Postives = 248/397 (62.47%), Query Frame = 2
Query: 581 PEMVVFGDSFSDSGRRFNAPASFDFEGIGPFPWARLYEAKDSEETFDAYVPGRGSVTNGKVWTEYLHVPQDLNFATSSGRMTETFRALETCLGYTGEGEEFPTGNLAEQIDLYLHDVVSRTDETLGYTHVIILGTNDFGAVVSAATRLAIAQTLRVLGALEEPYEDP-IPSEKVFRFVG-GIPQFDFEPAIAEIAGALSEGVERLIDAGVTGKILIGNIGSFRPSHGLAASGQAETFDHVALAAGTALQRVIDAYP-QLQLLDLYSLTAAIVDAPQVFTELGFREPQDAVKGDPVPLSTPCLKPDFFIDDNAEIMGTQALRAAGCQEECALCADSSSPCQNCFLGNPSAAICDDPDTRIFWDDIHFTTGVHRHFAAAVVECSKDFPDSARPFVEQLC 1762
P+MVVFGDS SD+GRR+NAPAS+ FEGIG +PW +LYEA DSE F A++PG GS+TNGK+W E+L+VPQ+LNFAT++ TETFR E C GYTGEGE+ PTG L EQI Y +D + ET YTH+I +G D + +A R +I E Y DP +P + +F G IAE+A + G+ RLIDAGVTG IL+GNIG+ + E +AL Q V D +P Q+++LD Y+L +AIVD P++F LGF P+ + LS PCL DF +D E+ GTQALR GCQEECALCAD++SPC CF GNPS +C DPD+R+FW +F+T H A+ +CSKD P+ RP V +LC
Sbjct: 47 PKMVVFGDSQSDTGRRYNAPASYVFEGIGVYPWPKLYEAPDSESKFRAFLPGAGSMTNGKMWPEWLNVPQELNFATATASATETFRTRENCEGYTGEGEDLPTGTLDEQITRYFND--ADLHETADYTHIIYIGNEDLNSHSAATARYSIGG---------EGYVDPYVPFDMLFDVADDGTVTSTHVHIIAELAESWRSGIARLIDAGVTGTILLGNIGNPEGLSSYIGTPLGEIVRSIALTIRAEAQAVADEFPDQVRILDNYTLFSAIVDTPEIFENLGFVAPEGSF------LSDPCLDLDFAVDYLGEVAGTQALRPVGCQEECALCADNTSPCGTCFEGNPSGQVCSDPDSRLFWGSRYFSTAFHHILGEAIRQCSKDSPNYDRPVVLELC 426
BLAST of mRNA_F-serratus_M_contig89.20264.1 vs. uniprot
Match: D8LHV8_ECTSI (GDSL-like lipolytic enzyme n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHV8_ECTSI) HSP 1 Score: 234 bits (598), Expect = 1.310e-66 Identity = 157/432 (36.34%), Postives = 221/432 (51.16%), Query Frame = 2
Query: 584 EMVVFGDSFSDSGRRFNAPASFDFEGIGPFPWARLYEAKDSEETFDAYVPGRGSVTNGKVWTEYLHVPQDLNFATSSGRMTETFRALETCLGYTGEGEEFP--TGNLAEQIDLYLHDVVSRTDETLG----YTHVIILGTNDFGAVVSAATRLAIAQTLRVLGALEEPYEDPIPSEKVFRFVGGIPQFDFEPAIAEIAGALSEGVERLIDAGVTGKILIGNIGSFRPSHGLAASGQ---------AETFDHVALAAGTALQRVIDAYP-----QLQLLDLYSLTAAIVDAPQVFTELGFREPQDAVKGDPVPLSTP--CLKPDFFIDDNAEIMGTQALRAAG-------CQ-----EECALCADSSSPCQNCFLGNPSAAICDDPDTRIFWDDIHFTTGVHRHFAAAVVECSKDFPDSARPFVEQLCPRTSS 1777
+++VFGDS SD+GRRF+AP + F IG +PW ++Y+A D E D Y G+ TNGKVW +YL++P N+AT SG T+TFR+ + C GYT + ++ TG L EQ+ YL D S D +G YTH I +G ND V A R A+A+ L V Y +P+ + +F + + + V LI+ GVTG+IL+ N F G+ A AE +D T L + A Q+++LDLYSL + V +F E GF+ STP CL +F +D + +IMG+QA G C +EC LC D SPCQNC + P+ ++CD PD IFWD +H T ++ FA AV ECSKD D ++P+V +LCP ++
Sbjct: 81 KIIVFGDSNSDAGRRFDAPNVYPFSDIGVYPWEKVYDA-DGEGMVDVY--HEGTNTNGKVWAQYLNIPNVQNYATGSGTATDTFRSQQLCTGYTTKADKASRRTGTLGEQMTKYLKDF-SLEDGKIGCSSEYTHFIGIGMNDVSNVAEAMQRTALAEYLGVT------YTEPV----------SVDDMNFVTMMQGVTDDIVAAVATLIEMGVTGRILVPN---FPSPFGVPAFDSPDVYYGLTLAEFYDQFITTMNTMLDLKLSALSSAGEDQVRVLDLYSLIDSSVHDRDIFNEEGFKTS-----------STPEQCLTYNFHVDSSTDIMGSQAQALRGKLFDWAQCDNYGPTDECVLCQDQMSPCQNCLVDPPTVSVCDSPDEHIFWDGLHTTDAFNKVFANAVFECSKDELDGSQPWVGKLCPAVAT 478
BLAST of mRNA_F-serratus_M_contig89.20264.1 vs. uniprot
Match: A0A6H5KTW7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTW7_9PHAE) HSP 1 Score: 110 bits (275), Expect = 1.820e-23 Identity = 80/235 (34.04%), Postives = 107/235 (45.53%), Query Frame = 2
Query: 587 MVVFGDSFSDSGRRFNAPASFDF--EGIGPFPWARLYEAKDSE-----ETFDAYVPGRGSVTNGKVWTEYLHVPQDLNFATSSGRMTETFRALETC-LGYTGEGEEFPTGNLAEQIDLYLHDVVSRTDETLGYTHVIILGTNDFGAVVSAATRLAIAQTLRVLGALEEPYEDPIPSEKVFRF----------VGGIPQFDFEPAIAEIAGALSEGVERLIDAGVTGKILIGNIGS 1237
MVVFGDS SD+G RFN P+SF F +GIG FPW RLY+ D + E AY+P S +NG W +L +P + ET + C L +T LA + YTHV +G N+ V+ A TR + + Y+DP+ EKVF +P F P I E+ GA E + RLI AG+TG+I + N+GS
Sbjct: 1 MVVFGDSNSDTGSRFNTPSSFQFKDDGIGAFPWKRLYDGPDRDVSDCVEKTSAYMPFDNSASNGIAWPTWLRIPD-----VGGAPLVETLFFVACCKLLFT----------LA-----------------VDYTHVAFIGANEMNRVIEAITRYSTGG---------QSYQDPVAFEKVFEVDATTGFPVLHESSLPVPTFAPIIEEVLGAWDEVIGRLIGAGITGRIHLANVGS 194 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig89.20264.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 6
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig89.20264.1 >prot_F-serratus_M_contig89.20264.1 ID=prot_F-serratus_M_contig89.20264.1|Name=mRNA_F-serratus_M_contig89.20264.1|organism=Fucus serratus male|type=polypeptide|length=442bp MKATNFFSLGVATFFFLELLLVVKECGGATSIRGREGREGYPEMVVFGDSback to top mRNA from alignment at F-serratus_M_contig89:549282..556945- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig89.20264.1 ID=mRNA_F-serratus_M_contig89.20264.1|Name=mRNA_F-serratus_M_contig89.20264.1|organism=Fucus serratus male|type=mRNA|length=7664bp|location=Sequence derived from alignment at F-serratus_M_contig89:549282..556945- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig89:549282..556945- >mRNA_F-serratus_M_contig89.20264.1 ID=mRNA_F-serratus_M_contig89.20264.1|Name=mRNA_F-serratus_M_contig89.20264.1|organism=Fucus serratus male|type=CDS|length=2652bp|location=Sequence derived from alignment at F-serratus_M_contig89:549282..556945- (Fucus serratus male)back to top |