mRNA_F-serratus_M_contig889.20262.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig889.20262.1 vs. uniprot
Match: F6MHT6_SACJA (Carbonic anhydrase n=1 Tax=Saccharina japonica TaxID=88149 RepID=F6MHT6_SACJA) HSP 1 Score: 220 bits (560), Expect = 4.430e-69 Identity = 107/175 (61.14%), Postives = 127/175 (72.57%), Query Frame = 1
Query: 16 QVLFNGCSQQASLSFNNETYNLVQIHIHSPSEHAIGGSLRAAEIHWVHVKAGTTDELLVVGVLYDVSEYGTN--LQPLWDVLDTGAASTSASFDTQIYDLIPPNKVFSHYNGSLTTPPCTEGVTWIVMNEATVISKMQLDEFR----------VDEQGNTNRPYQPLNGRDVFLV 504
++LF GCS + F E YNL+QIHIHSPSEH IGGS +AEIHWVHVK GT D+LLVVGVL+D ++YG+N ++ LWDVLD G +T F T+IYD++P N VFSHY GSLTTPPCTEGV WIVM++ +SKMQLDEFR VDE GNTNRP Q LN R +F V
Sbjct: 114 EILFGGCSDVPHVEFKGERYNLLQIHIHSPSEHMIGGSEHSAEIHWVHVKEGTEDQLLVVGVLFDTTDYGSNVEIEHLWDVLDIGETTTKEVFTTRIYDIMPSNPVFSHYMGSLTTPPCTEGVKWIVMSDPVTMSKMQLDEFRTSVALFDDSKVDEHGNTNRPGQSLNDRKIFFV 288
BLAST of mRNA_F-serratus_M_contig889.20262.1 vs. uniprot
Match: Q9SMD6_9PHAE (Carbonic anhydrase alpha type (Fragment) n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q9SMD6_9PHAE) HSP 1 Score: 177 bits (450), Expect = 2.210e-54 Identity = 86/141 (60.99%), Postives = 103/141 (73.05%), Query Frame = 1
Query: 118 IGGSLRAAEIHWVHVKAGTTDELLVVGVLYDVSEYGTN--LQPLWDVLDTGAASTSASFDTQIYDLIPPNKVFSHYNGSLTTPPCTEGVTWIVMNEATVISKMQLDEFR----------VDEQGNTNRPYQPLNGRDVFLV 504
IGGS AEIHWVHVKAGT D+LLV+GVL+D ++YG+N ++ LWDVLD G +T F T++YD++P N VFSHY GSLTTPPCTEGV WIVM++ + KMQLDEFR VDE GNTNRP Q LN RD+F V
Sbjct: 2 IGGSEHEAEIHWVHVKAGTDDQLLVIGVLFDTTQYGSNVEIEHLWDVLDIGKPTTDEVFVTRVYDIMPSNPVFSHYMGSLTTPPCTEGVKWIVMSDPVTMGKMQLDEFRTSVALFDNSKVDEMGNTNRPRQSLNNRDIFFV 142
BLAST of mRNA_F-serratus_M_contig889.20262.1 vs. uniprot
Match: D8LB10_ECTSI (Carbonic anhydrase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LB10_ECTSI) HSP 1 Score: 179 bits (455), Expect = 3.700e-53 Identity = 90/175 (51.43%), Postives = 113/175 (64.57%), Query Frame = 1
Query: 16 QVLFNGCSQQASLSFNNETYNLVQIHIHSPSEHAIGGSLRAAEIHWVHVKAGTTDELLVVGVLYDVSEYGTN--LQPLWDVLDTGAASTSASFDTQIYDLIPPNKVFSHYNGSLTTPPCTEGVTWIVMNEATVISKMQLDEFR----------VDEQGNTNRPYQPLNGRDVFLV 504
QV F+GC+ L + ETYNL+Q HIHSPSEH +GG+ AAEIH VH+K TTD LLVVG++++VS+YG N L+P+W+V+D F Y L+P F+ Y+GSLTTPPCTEGV WI+M+E +S QLD +R V E G TNRP Q LNGRDV V
Sbjct: 119 QVDFSGCTDAPYLQYQGETYNLLQFHIHSPSEHVLGGAEHAAEIHLVHLKQNTTDGLLVVGIMFEVSDYGQNVELEPMWNVMDLNQDIAEEQFMAAAYSLLPATPSFTTYSGSLTTPPCTEGVRWILMSEPNYMSTWQLDNYRRAVALHEGSKVSEVGATNRPIQELNGRDVLYV 293
BLAST of mRNA_F-serratus_M_contig889.20262.1 vs. uniprot
Match: A0A872YNN4_SACJA (Carbonic anhydrase n=1 Tax=Saccharina japonica TaxID=88149 RepID=A0A872YNN4_SACJA) HSP 1 Score: 164 bits (415), Expect = 3.840e-47 Identity = 88/178 (49.44%), Postives = 115/178 (64.61%), Query Frame = 1
Query: 16 QVLFNGCSQQASLSFNNETYNLVQIHIHSPSEHAIGGSLRAAEIHWVHVKA---GTTDELLVVGVLYDVSEYGTN--LQPLWDVLDTGAASTSASFDTQIYDLIPPNKVFSHYNGSLTTPPCTEGVTWIVMNEATVISKMQLDEFR----------VDEQGNTNRPYQPLNGRDVFLV 504
++ F+ C+ ++LSF+ Y+L+Q+HIHSPSEH + GSL AEIH VH + GT ELLV+GV D E+G N L+PLWDVL +GA Y+LIP + +SHY GSLTTPPC+E V W+VM+ TVI +QLD FR VDE+ NTNRP Q +NGR V++V
Sbjct: 121 EIDFSECTSTSNLSFDGGKYSLLQMHIHSPSEHMVAGSLHDAEIHLVHSRDDSDGTESELLVIGVFLDAKEHGWNVALEPLWDVLGSGAKPRGV---INPYELIPSDMAYSHYMGSLTTPPCSEIVRWVVMSTPTVIGDLQLDIFRDSVATATNSQVDERSNTNRPGQAINGRAVYIV 295
BLAST of mRNA_F-serratus_M_contig889.20262.1 vs. uniprot
Match: A0A4P7J5P8_9ENTR (Carbonic anhydrase n=1 Tax=Citrobacter tructae TaxID=2562449 RepID=A0A4P7J5P8_9ENTR) HSP 1 Score: 123 bits (308), Expect = 1.270e-31 Identity = 67/170 (39.41%), Postives = 94/170 (55.29%), Query Frame = 1
Query: 10 PTQVLFNGCSQQASLS--------FNNETYNLVQIHIHSPSEHAIGGSLRAAEIHWVHVKAGTTDELLVVGVLYDVSEYGTNLQPLWDVLDTGAASTSASFDTQIYDLIPPNKVFSHYNGSLTTPPCTEGVTWIVMNEATVISKMQLDEFRVDEQGNTNRPYQPLNGRDV 495
P+ +L NG + QA +S ++ Y L Q H H+PSE+ I G A E+H VH T ++ V+ VL+D+ E L+ LW + + I +L+P +K + HY+GSLTTPPC+E V+W VM +S+ QL FR Q N NRP QPLNGR+V
Sbjct: 80 PSTLLNNGHTLQAEISSYTTDSIHLISDVYTLKQFHFHAPSENTIDGKQYAMEMHLVH--EDRTGKIAVIAVLFDIGEPNDALENLWQSIPADGDNMPLFSPININELLPEDKNYWHYSGSLTTPPCSEPVSWFVMKSPLTLSQKQLSRFRAAIQYNNNRPVQPLNGREV 247
BLAST of mRNA_F-serratus_M_contig889.20262.1 vs. uniprot
Match: UPI0010C96727 (carbonic anhydrase family protein n=1 Tax=Vibrio TaxID=662 RepID=UPI0010C96727) HSP 1 Score: 119 bits (297), Expect = 4.050e-30 Identity = 64/162 (39.51%), Postives = 87/162 (53.70%), Query Frame = 1
Query: 16 QVLFNGCSQQASLSFNNETYNLVQIHIHSPSEHAIGGSLRAAEIHWVHVKAGTTDELLVVGVLYDVSEYGTNLQPLWDVLDTGAASTSASFDTQIYDLIPPNKVFSHYNGSLTTPPCTEGVTWIVMNEATVISKMQLDEFRVDEQGNTNRPYQPLNGRDVFL 501
QV FNG S+ ++Y+L+Q H H+PSE+ I G E+H VH A L VVGV+++ L+ +WDV+ + L+P + +NGSLTTPPC+EGVTW+VM ISK QL++FR GN NRP Q +N R V
Sbjct: 81 QVNFNG---DQSIEVEGKSYSLLQFHFHAPSENLIKGHSYPLEVHLVH--ADENKNLAVVGVMFEEGATNPELEKVWDVMPANKGQQDLQHSINLTGLLPKQSDYFRFNGSLTTPPCSEGVTWLVMKNPITISKAQLEKFRTLYSGN-NRPTQDVNARPVLF 236
BLAST of mRNA_F-serratus_M_contig889.20262.1 vs. uniprot
Match: A0A268TXX1_9HELI (Alpha-carbonic anhydrase domain-containing protein n=1 Tax=Helicobacter sp. 12S02232-10 TaxID=1476197 RepID=A0A268TXX1_9HELI) HSP 1 Score: 119 bits (297), Expect = 5.270e-30 Identity = 63/161 (39.13%), Postives = 88/161 (54.66%), Query Frame = 1
Query: 16 QVLFNGCSQQASLSFNNETYNLVQIHIHSPSEHAIGGSLRAAEIHWVHVKAGTTDELLVVGVLYDVSEYGTNLQPLWDVLDTGAASTSASFDTQIYDLIPPNKVFSHYNGSLTTPPCTEGVTWIVMNEATVISKMQLDEFRVDEQGNTNRPYQPLNGRDVF 498
QV FN +Q + N+ Y L+Q H H+P+E I +H VH +L+VVG+ + + + L P+W+ + + TS + DLIP F H+NGSLTTPPCTEGVTWIV+ + ISK QL++F+ G NRP QP N R +
Sbjct: 88 QVNFNTGTQNY-IKIGNQEYELLQFHFHAPAEFRINDKQYPLAMHLVH--QDKNKQLVVVGIEFKIGKENKILAPIWEAMPEKSGETSYPKKIALQDLIPKKTYFYHFNGSLTTPPCTEGVTWIVLKKPLEISKAQLEKFKKIIGGTNNRPLQPSNNRVII 245
BLAST of mRNA_F-serratus_M_contig889.20262.1 vs. uniprot
Match: A0A3A0G953_9BACT (Alpha-carbonic anhydrase domain-containing protein n=1 Tax=bacterium TaxID=1869227 RepID=A0A3A0G953_9BACT) HSP 1 Score: 118 bits (296), Expect = 2.340e-29 Identity = 70/170 (41.18%), Postives = 91/170 (53.53%), Query Frame = 1
Query: 13 TQVLFNGCSQQAS------LSFNNETYNLVQIHIHSPSEHAIGGSLRAAEIHWVHVKAGTTDELLVVGVLYDVSEYGTNLQPLWDVLDTGAA-STSASFDTQIYDLIPPNKVFSHYNGSLTTPPCTEGVTWIVMNEATVISKMQLDEFRVDEQGNTNRPYQPLNGRDVFL 501
T++L NG + Q + + + Y+L Q H H+PSEH IGG AAE+H VH A +L VVGVL + E T L P+WD L + TS D +P + Y GSLTTPPCTEGV+W VM +S QL+ F + N NRP QPL R++ L
Sbjct: 129 TRILNNGHTIQVNYDAGSYIEVDGHRYDLDQFHFHAPSEHTIGGQPAAAELHLVHKDAAK--KLAVVGVLLEEGEANTALAPVWDHLPAEESPETSVGVDVDAAAFLPAEQTTYRYRGSLTTPPCTEGVSWFVMTTPVTLSAEQLEAFTAIIEAN-NRPVQPLGARELDL 295
BLAST of mRNA_F-serratus_M_contig889.20262.1 vs. uniprot
Match: A0A2R3P8T9_9BACT (Carbonic anhydrase n=2 Tax=Bacteria TaxID=2 RepID=A0A2R3P8T9_9BACT) HSP 1 Score: 116 bits (291), Expect = 3.850e-29 Identity = 58/142 (40.85%), Postives = 81/142 (57.04%), Query Frame = 1
Query: 73 YNLVQIHIHSPSEHAIGGSLRAAEIHWVHVKAGTTDELLVVGVLYDVSEYGTNLQPLWDVLDTGAASTSASFDTQIYDLIPPNKVFSHYNGSLTTPPCTEGVTWIVMNEATVISKMQLDEFRVDEQGNTNRPYQPLNGRDVF 498
+ L Q H H+PSEH I G E H+VH A L V+GV++ + ++ +W+ L + + YDL+P K + Y+GSLTTPPC+EGV WIVM E +SK Q+++FR G+TNRP QPLN R +
Sbjct: 102 FELKQFHFHAPSEHTIKGKSYPFEAHFVH--ADKDGNLAVIGVIFKEGKKNPIIEKIWENLPEAGKTIKLAHKINAYDLLPKKKKYYRYSGSLTTPPCSEGVRWIVMEEEMELSKEQIEKFRKLMGGDTNRPVQPLNARMIM 241
BLAST of mRNA_F-serratus_M_contig889.20262.1 vs. uniprot
Match: A0A354A4T6_9BACT (Carbonic anhydrase n=1 Tax=Nitrospiraceae bacterium TaxID=2026770 RepID=A0A354A4T6_9BACT) HSP 1 Score: 116 bits (291), Expect = 4.130e-29 Identity = 58/172 (33.72%), Postives = 97/172 (56.40%), Query Frame = 1
Query: 7 IPTQVLFNG------CSQQASLSFNNETYNLVQIHIHSPSEHAIGGSLRAAEIHWVHVKAGTTDELLVVGVLYDVSEYGTNLQPLWDVLDTGAASTSASFDTQI--YDLIPPNKVFSHYNGSLTTPPCTEGVTWIVMNEATVISKMQLDEFRVDEQGNTNRPYQPLNGRDVF 498
+P V+ NG ++ +++ +T+ L+Q H H+PSE+ I G E H VH A L V+GV++D + ++++ +W ++ A T+ + D ++ +++P NK + +NGSLTTPPCTEGV W VM SK Q++++ +TNRP QP++ R V
Sbjct: 77 VPLDVMNNGHTIKVGYAEGSTMKIEGQTFKLLQFHFHTPSENQIEGKSFPMEAHLVH--ADNEGNLAVIGVMFDEGKANSSIEEIWKLMPAEAGKTNTASDVRVNVMNMLPANKDYYRFNGSLTTPPCTEGVRWFVMKNPVSASKEQIEKYSHTMHHDTNRPVQPIHARPVL 246 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig889.20262.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig889.20262.1 >prot_F-serratus_M_contig889.20262.1 ID=prot_F-serratus_M_contig889.20262.1|Name=mRNA_F-serratus_M_contig889.20262.1|organism=Fucus serratus male|type=polypeptide|length=171bp MLIPTQVLFNGCSQQASLSFNNETYNLVQIHIHSPSEHAIGGSLRAAEIHback to top mRNA from alignment at F-serratus_M_contig889:317348..318940+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig889.20262.1 ID=mRNA_F-serratus_M_contig889.20262.1|Name=mRNA_F-serratus_M_contig889.20262.1|organism=Fucus serratus male|type=mRNA|length=1593bp|location=Sequence derived from alignment at F-serratus_M_contig889:317348..318940+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig889:317348..318940+ >mRNA_F-serratus_M_contig889.20262.1 ID=mRNA_F-serratus_M_contig889.20262.1|Name=mRNA_F-serratus_M_contig889.20262.1|organism=Fucus serratus male|type=CDS|length=1026bp|location=Sequence derived from alignment at F-serratus_M_contig889:317348..318940+ (Fucus serratus male)back to top |