|
|
Homology
BLAST of mRNA_F-serratus_M_contig887.20243.1 vs. uniprot
Match: D7FVG0_ECTSI (Centaurin, beta 5, isoform CRA_a n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVG0_ECTSI) HSP 1 Score: 445 bits (1144), Expect = 5.270e-146 Identity = 230/373 (61.66%), Postives = 269/373 (72.12%), Query Frame = 1
Query: 100 SSYDRLWSPRQERVIKGGYLWKRSTNVRKDWKRRYFFIQNGKLFYQRQEAFVSPPVRVCDIKLCHVKSCLKDNDLRFSFEIISPKQRT-YLLQAEDEEKHRSWVSVIKTEIEHLLSASQPLTGE------PLEASTDGFR---------------QGQEGSQYPLTQEFPLNKAQYNKLMQANPECVDCRGRDPDWASISLGVMMCIECSGIHRSMGVHVSKVRSLTLDRWTAPLLELLEKGGNDRANKVWEAYKS-DPLF----VKIKPDCDRSSRETFIRAKYERRRFLDPPFDSSPEATLHASRRLSVAAREGDLLNALWCLAHGAIVNWSSLEEQGCTAAQEASRRSHVALRELLVNNGWSLDPPSRER 1137
SS LWSPRQ+R IKGGYLWKRSTNVRKDW+RRYFFIQNGKLFYQRQE FVSP RVCDIKLCHV+SCLKD DLRFSFEIISP++RT YLLQAEDE+ H+ WV+ IK+EIE LLS+S P + + ST F G++ + + LNKAQ L +ANPECVDC R+PDW+SI+LGVMMCIECSGIHRSMGVHVSKVRSLTLDRWT PL+ELL K GN AN+VWEA++ +P F K+ P+ DR+SRE FIRAKYE+RRF+DPP D+SPE L +SR L A +EG++L A+WCLAHGA VNW+ G TAA EA+R S VAL ELL NNG L S +
Sbjct: 262 SSKGALWSPRQDRCIKGGYLWKRSTNVRKDWQRRYFFIQNGKLFYQRQETFVSPAKRVCDIKLCHVRSCLKDTDLRFSFEIISPQRRTTYLLQAEDEDSHQQWVAAIKSEIERLLSSSMPASADWDWQSPNSSISTGTFTLTGAXXXXXXXDKGGAAGGGAELAMPADMSLNKAQLTSLWEANPECVDCGAREPDWSSINLGVMMCIECSGIHRSMGVHVSKVRSLTLDRWTTPLVELLLKAGNHNANEVWEAHRDGNPAFSAMKAKLYPEADRASREEFIRAKYEKRRFVDPPHDTSPEVALSSSRLLFDACKEGNMLEAMWCLAHGADVNWTDTTGGGYTAAHEAARGSRVALLELLANNGCDLSATSENK 634
BLAST of mRNA_F-serratus_M_contig887.20243.1 vs. uniprot
Match: A0A6H5L2J8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2J8_9PHAE) HSP 1 Score: 436 bits (1121), Expect = 7.130e-139 Identity = 228/381 (59.84%), Postives = 270/381 (70.87%), Query Frame = 1
Query: 97 GSSYDRLWSPRQERVIKGGYLWKRSTNVRKDWKRRYFFIQNGKLFYQRQEAFVSPPVRVCDIKLCHVKSCLKDNDLRFSFEIISPKQRT-YLLQAEDEEKHRSWVSVIKTEIEHLLSASQPLTGEPLEAST-------------------------DGFRQGQEGSQYPLTQEFPLNKAQYNKLMQA---NPECVDCRGRDPDWASISLGVMMCIECSGIHRSMGVHVSKVRSLTLDRWTAPLLELLEKGGNDRANKVWEAYKS-DPLF----VKIKPDCDRSSRETFIRAKYERRRFLDPPFDSSPEATLHASRRLSVAAREGDLLNALWCLAHGAIVNWSSLEEQGCTAAQEASRRSHVALRELLVNNGWSLDPPSRER 1137
GSS LW+ RQ+R IKGGYLWKRSTNVRKDW+RRYFFIQNGKLFYQRQE FVSP RVCDIKLCHV+SCLKD DLRFSFEIISP++RT YLLQAEDE+ H+ WV+ IK+EIE LLS+S P +G G G++ + + LNKAQ L +A NPECVDC R+PDW+SI+LGVMMCIECSGIHRSMGVHVSKVRSLTLDRWT PL+ELL + GN AN+VWEA++ +P F K+ P+ DR+SRE FIRAKYE+RRF+DPP D+SPEA L +SR L A +EG+++ A+WCLAHGA VNW++ E G TAA EA+R S VAL ELL NNG L S +
Sbjct: 515 GSSRGALWTLRQDRCIKGGYLWKRSTNVRKDWQRRYFFIQNGKLFYQRQETFVSPAKRVCDIKLCHVRSCLKDTDLRFSFEIISPQRRTTYLLQAEDEDSHQQWVAAIKSEIERLLSSSMPAXXXXXXXXXXXXXXXXXXXXXGAXXXXXXXXXXDEGGAAGG-GAELAIPADMSLNKAQLTSLWEASAANPECVDCGAREPDWSSINLGVMMCIECSGIHRSMGVHVSKVRSLTLDRWTTPLVELLREAGNHNANEVWEAHRDGNPAFSAMKAKLYPEADRASREAFIRAKYEQRRFIDPPHDASPEAALSSSRLLFDACKEGNMVEAMWCLAHGADVNWTNTAEGGYTAAHEAARGSRVALLELLANNGCDLSATSENK 894
BLAST of mRNA_F-serratus_M_contig887.20243.1 vs. uniprot
Match: A0A835ZCL2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCL2_9STRA) HSP 1 Score: 317 bits (811), Expect = 4.020e-92 Identity = 172/339 (50.74%), Postives = 219/339 (64.60%), Query Frame = 1
Query: 124 PRQERVIKGGYLWKRSTNVRKDWKRRYFFIQNGKLFYQRQEAFVSPPVRVCDIKLCHVKSCLKDNDLRFSFEIISPKQRTYLLQAEDEEKHRSWVSVIKTEIEHLLSA------SQPLTGEPLEASTDGFRQGQEGSQYPLTQEFPLNKAQYNKLMQANPECVDCRGRDPDWASISLGVMMCIECSGIHRSMGVHVSKVRSLTLDRWTAPLL-ELLEKGGNDRANKVWEAYKSDPLFVKIKPDCDRSSRETFIRAKYERRRFLDPPFDSSPEATLHASRRLSVAAREGDLLNALWCLAHGAIVNWSSLEEQGCTAAQEASRRSHVALRELLVNNGWSLD 1119
P + K GYLWKRS NVR+DWKRR+F IQNGKL+YQRQE VSPPV VCDI+LC V++C K +D RF FEIISPKQRT AED+ H+SW+ I+ EIEHLLS S + P+ + G + G+ ++ +L +ANP+CVDC PDWASISLGV+MCIECSGIHRSMGVH+SKVRSL LDRWT LL +L+E GN N VWEA S+ ++ PD DR++RE+FIR KY R F+ P P+A A+R L AA+ G++ L +AHGA +NW++ +E T A +A R +A+ ELL NG +LD
Sbjct: 784 PASAQPAKSGYLWKRSNNVRRDWKRRFFCIQNGKLYYQRQETAVSPPVLVCDIQLCTVRACDKGSDPRFCFEIISPKQRTSAGFAEDDASHQSWIDAIRAEIEHLLSVGSGRRMSAYSSNAPINQDSMGAQSAAAGTS--------MSPLALTRLSKANPQCVDCGAATPDWASISLGVLMCIECSGIHRSMGVHISKVRSLMLDRWTPSLLLQLMESVGNTTFNAVWEADMSESQ-PRLAPDSDRTARESFIRRKYMMRAFIGPRL--GPDA---ANRELYAAAKTGEMQRVLTAIAHGADLNWANEQEHMSTPAHQAVRGGQLAVLELLSQNGAALD 1108
BLAST of mRNA_F-serratus_M_contig887.20243.1 vs. uniprot
Match: A0A7R9YAC1_9STRA (Hypothetical protein n=2 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YAC1_9STRA) HSP 1 Score: 250 bits (639), Expect = 4.050e-69 Identity = 146/329 (44.38%), Postives = 197/329 (59.88%), Query Frame = 1
Query: 139 VIKGGYLWKRSTNVRKDWKRRYFFIQNGKLFYQRQEAFVSPPVRVCDIKLCHVKSCLKDNDLRFSFEIISPKQRTYLLQAEDEEKHRSWVSVIKTEIEHLLSASQPLTGEPLEASTDGFRQ--GQEGSQYPLTQEFPLNKAQYNKLMQANPECVDCRGRDPDWASISLGVMMCIECSGIHRSMGVHVSKVRSLTLDRWTAPLLELLEKGGNDRANKVWEAYKSDPLFVKIKPDCDRSSRETFIRAKYERRRFLDPPFDSSPEATLHASRRLSVAAREGDLLNALWCLAHGAIVNWSSLEEQGCTAAQEASRRSHVALRELLVNNGWSLD 1119
V+K GYLWKRS+NVRKDWKRRYF I G+LFY++ E PP +VCDI LC V+ +K + SFEIISP RT+ LQAE + SW+ VI+++ E L+ +++ + + A + Q G+ S P +F L KA LM +N CVDC PDW SI+LG++MCIECSG+HR++G H+SKVRSLTLD L ++E GND NKV+E+ + KI P R RETFIR KYE R+F+ P P A + L AA +G++ A+ +A GA VN ++ + G TA A+ H + E L NG +LD
Sbjct: 629 VVKEGYLWKRSSNVRKDWKRRYFKIMAGRLFYEKLEG--GPPTKVCDIMLCTVRERVKSHANLHSFEIISPGNRTFTLQAESRKDMESWIHVIRSQTESLIVSTERAQTDAVAAEKCDYDQSNGRLSSSGPA--DFELVKA----LMDSNRLCVDCNRPRPDWCSINLGILMCIECSGVHRALGAHISKVRSLTLDVLPCESLCVMECLGNDAINKVYESGLHEVGASKIGPGTTRDERETFIRDKYENRKFIKP---FQPTAQGEVQKMLYDAAADGNMQGAIQAMAMGAHVNKAAPDAGGNTALHAAAAGGHHLMIEFLWQNGANLD 946
BLAST of mRNA_F-serratus_M_contig887.20243.1 vs. uniprot
Match: A0A4D9CVE4_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CVE4_9STRA) HSP 1 Score: 243 bits (620), Expect = 5.740e-66 Identity = 145/350 (41.43%), Postives = 198/350 (56.57%), Query Frame = 1
Query: 142 IKGGYLWKRSTNVRKDWKRRYFFIQNGKLFYQRQEAFVSPP-VRVCDIKLCHVKSCLKDNDLRFSFEIISPKQRTYLLQAEDEEKHRSWVSVIKTEIEHLL-------------SASQPLTGEPLEAST----DGFRQGQEGSQYPLTQEFPLNKAQYNKLMQANPECVDCRGRDPDWASISLGVMMCIECSGIHRSMGVHVSKVRSLTLDRWTAPLLELLEKGGNDRANKVWEAYKSDPLFVKIKPDCDRSSRETFIRAKYERRRFLDPPFDSSPEATLHASRR-----LSVAAREGDLLNALWCLAHGAIVNWSSLEEQGCTAAQEASRRSH-VALRELLVNNGWSLD 1119
+K GYLWKRS NVRKDWKRR+F+I+NGKL YQ ++ + PP +CD+ + V+ C +D D RF+FEI+SP +R Y+LQAE E + + W+ +++ E LL S S +G ST F + + + E + ++ +ANP C DC+ +PDWAS+S G +MCIECSGIHRS+GVHVSKVRSL LD W L E++E GN RAN+VWEA L K + R RE +IR KY R+ FL + EA + L AA +GDL W LAHGA VN+++ +E+ T +R +A E LV NG ++D
Sbjct: 744 LKQGYLWKRSNNVRKDWKRRFFYIRNGKLSYQCEDDPIGPPRAEICDLLISTVRECSRDTDTRFTFEILSPGKRPYMLQAESEMEFQEWIKALRSSTESLLVTGAGGDRNTSYTSLSSAESGTSAAGSTTESYSTFAGPMDAGRAAILSEATASFVA--RVREANPVCADCQRPEPDWASVSFGTVMCIECSGIHRSLGVHVSKVRSLLLDAWPRSLREVMEAIGNLRANQVWEAQVPCDL-EKPGVEAPREVREAWIRDKYVRKAFLGQSRRTEKEAEGVKGQEEPNAVLYAAAIQGDLAKMGWALAHGADVNFANGKERRRTPVHAVCQRGQSLAALEFLVLNGGAVD 1090
BLAST of mRNA_F-serratus_M_contig887.20243.1 vs. uniprot
Match: A0A7S1XSU2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XSU2_9STRA) HSP 1 Score: 201 bits (512), Expect = 5.740e-55 Identity = 113/261 (43.30%), Postives = 156/261 (59.77%), Query Frame = 1
Query: 139 VIKGGYLWKRSTNVRKDWKRRYFFIQNGKLFYQRQEAFVSPPVRVCDIKLCHVKSCLKDNDLRFSFEIISPKQRTYLLQAEDEEKHRSWVSVIKTEIEHLL---------SASQPLTGEPLEASTDGFRQGQEGSQYPLTQEFPLNKAQYNKLMQANPECVDCRGRDPDWASISLGVMMCIECSGIHRSMGVHVSKVRSLTLDRWTAPLLELLEKGGNDRANKVWEAYKSD-PLFVKIKPDCDRSSRETFIRAKYERRRFL 891
V+K G+LWKRS++VRKDWKRR+F I G+L Y+R E +P V+VCDI LC V+ K + FSF++ISP +RT++LQAE + W+ I+ + E LL +A+ + AS R + G+ L N + LMQ NP CVDC DW SI+LG +MCIECSG+HRS+G H+SKVRSLTLD +++L + GN+ N ++EA D P K+ P DR RE +IR KY++R F+
Sbjct: 185 VVKAGFLWKRSSSVRKDWKRRWFLIHGGRLCYERLEGGAAP-VKVCDIMLCTVRERKKTHQNLFSFDVISPGRRTFVLQAESRAEMDDWIRAIREQTESLLVGNNHTEDSAATAAIPDSTRHASL--MRDSEMGAGGTLR-----NLDTMSLLMQVNPTCVDCDTPHADWCSINLGALMCIECSGVHRSLGAHISKVRSLTLDVLPTEQVQVLGELGNNIVNTIFEAGLDDHPKRTKLAPGADRDRREAYIRDKYQQRAFV 437
BLAST of mRNA_F-serratus_M_contig887.20243.1 vs. uniprot
Match: UPI000873E3F6 (arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 3-like n=1 Tax=Lates calcarifer TaxID=8187 RepID=UPI000873E3F6) HSP 1 Score: 202 bits (515), Expect = 6.660e-55 Identity = 136/329 (41.34%), Postives = 182/329 (55.32%), Query Frame = 1
Query: 151 GYLWKRSTNVRKDWKRRYFFIQNGKLFYQRQEAFVSPPVRVCDIKLCHVKSCLKDNDLRFSFEIISPKQRTYLLQAEDEEKHRSWVSVIKTEIEHLLSASQPLTGEPLE-----ASTDGFRQGQEGSQYPLTQEFPLNKAQYN-KLMQANPECVDCRGRDPDWASISLGVMMCIECSGIHRSMGVHVSKVRSLTLDRWTAPLLELLEKGGNDRANKVWEAYKSDPLFVKIKPDCDRSSRETFIRAKYERRRFLDPPFDSSPEATLHASRRLSVAAREGDLLNALWCLAHGAIVNWSSLEEQGCTAAQEASRRSHVALRELLVNNGWSLD 1119
GYL+KR++N K W RR+F IQ +L YQ++ P V V D++LC VK +N+ RF FE++SP + LLQA+ E + ++W+S ++ I SA Q +PL +S G QE KA + + N +C DC PDWASI+LGV MCIECSGIHRS+GVH+SKVRSLTLD W A L+LL GND N+++EA SD VK D R+ +ET+I+ KY RRF+ A RRL AA GDL+ LA GA VN S +E G TA A+ + E L+ NG +++
Sbjct: 34 GYLYKRASNAFKTWSRRWFSIQKNQLVYQKKFKD-QPTVVVEDLRLCTVKPST-ENERRFCFEVVSPS-KCCLLQADSERQQQAWISAVQNSI---ASAFQEHREDPLSPRQRCSSVSAGTMGGXXXXXXXDQENEGRKALDEVQAIPGNRQCCDCGEPGPDWASINLGVTMCIECSGIHRSLGVHLSKVRSLTLDSWEAEQLKLLCVLGNDVMNRIYEARCSDEGRVKPSADSSRAEKETWIKEKYVERRFVQSS-SCEQRGKDEAGRRLYRAASVGDLVAMAAALAEGAEVNGSVADEGGRTALIGAAIGGSLLACEFLLLNGANVN 355
BLAST of mRNA_F-serratus_M_contig887.20243.1 vs. uniprot
Match: A0A2R5GGS8_9STRA (Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 1 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GGS8_9STRA) HSP 1 Score: 206 bits (525), Expect = 3.160e-53 Identity = 113/262 (43.13%), Postives = 156/262 (59.54%), Query Frame = 1
Query: 124 PRQERVIKGGYLWKRSTNVRKDWKRRYFFIQNGKLFYQRQEAFVSPPVRVCDIKLCHVKSC--LKDNDLRFSFEIISPKQRTYLLQAEDEEKHRSWVSVIKTEIEHLLS--ASQPLTGEPLEASTDGFRQGQEGSQYPLTQEFPLNKAQYNKLMQANPECVDCRGRDPDWASISLGVMMCIECSGIHRSMGVHVSKVRSLTLDRWTAPLLELLEKGGNDRANKVWEAYKSDPL-FVKIKPDCDRSSRETFIRAKYERRRFLD 894
P+ V+K GYL KRS+ +RK WKRR+F +Q GKLFY R PV +C+ V+ ND+ F FEI+SP +RTY++QAE+E R W+ I+T E L++ Q E STD + +++ Q + Q + +AN C DC PDWASI+LGV++CIECSGIHRS+GVHVSKVRS+TLD WT +LE GN+ N ++EA+ S+ + K +PD R +E FI+AKY + FL+
Sbjct: 1058 PKSTPVVKEGYLRKRSSKMRKSWKRRWFVLQGGKLFYIRDYDVCDQPVFICECMFATVREADAAVTNDMSFCFEILSPNRRTYVMQAENEISMREWIDTIRTSTERLITDFGGQSQVSRTSEVSTDPGTEEATKTKFAAGQ--LCSDPQLLAVQEANTTCADCGAAQPDWASINLGVLVCIECSGIHRSLGVHVSKVRSMTLDSWTDASKAVLEALGNEAVNAIFEAHLSEQEEWAKPEPDAPRRVKERFIQAKYVWKAFLE 1317
BLAST of mRNA_F-serratus_M_contig887.20243.1 vs. uniprot
Match: A0A8C8S4D6_9SAUR (Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein n=2 Tax=Pelusios castaneus TaxID=367368 RepID=A0A8C8S4D6_9SAUR) HSP 1 Score: 202 bits (514), Expect = 5.140e-53 Identity = 126/356 (35.39%), Postives = 189/356 (53.09%), Query Frame = 1
Query: 139 VIKGGYLWKRSTNVRKDWKRRYFFIQNGKLFYQRQEAFVSPPVRVCDIKLCHVKSCLKDNDLRFSFEIISPKQRTYLLQAEDEEKHRSWVSVIKTEIEHLLSASQP-LTGEPLEASTDGFRQGQEGSQYPLTQEFPLNKAQYNKLMQANPECVDCRGRDPDWASISLGVMMCIECSGIHRSMGVHVSKVRSLTLDRWTAPLLELLEKGGNDRANKVWEAYKSDPLFVKIKPDCDRSSRETFIRAKYERRRFL----------------------------DPPFDSSPEATLHASRRLSVAAREGDLLNALWCLAHGAIVNWSSLEEQGCTAAQEASRRSHVALRELLVNNGWSLD 1119
V+ GYL+KR++N K W RR+F IQ+ +L YQ++ A + V V D++LC VK C D++ RF FE++SP ++ LLQA+ E ++W+S +++ I S + G+ E + E S + + ++ N +C DCR PDWASI+LGV +CIECSGIHRS+GVH SKVRSLTLD W L++L+ + GN+ N+++EA D K +P C R+ +E++IRAKY ++F+ +P +P LH L AA + +L LAHGA VNW + E+ T A + + E L+ NG S++
Sbjct: 267 VVMEGYLYKRASNAFKTWSRRWFSIQSNQLVYQKR-AKDALTVVVDDLRLCTVKPC-PDHERRFCFEVVSPS-KSCLLQADSERHQQAWLSAVQSSIASAFSEGRTEAPGQHPERPSSMSAATMEVSGRSPREAVDKRVLDQVQRLEGNAQCCDCREPAPDWASINLGVTLCIECSGIHRSLGVHFSKVRSLTLDSWEPELVKLMCELGNNTLNRIYEARVEDMTVKKPQPSCSRAEKESWIRAKYVEKKFITKLPEVRLSRGGRRPPLKPKPGSISRATEPREAGTPPEGLHPGALLYWAAGQQNLPTMADALAHGADVNWVNSAEESRTPLLRAVAANSLLACEFLLQNGASVN 619
BLAST of mRNA_F-serratus_M_contig887.20243.1 vs. uniprot
Match: UPI000154CFA9 (Centaurin, beta 5, isoform CRA_a n=1 Tax=Mus musculus TaxID=10090 RepID=UPI000154CFA9) HSP 1 Score: 199 bits (505), Expect = 6.100e-52 Identity = 127/340 (37.35%), Postives = 185/340 (54.41%), Query Frame = 1
Query: 139 VIKGGYLWKRSTNVRKDWKRRYFFIQNGKLFYQRQEAFVSPPVRVCDIKLCHVKSCLKDNDLRFSFEIISPKQRTYLLQAEDEEKHRSWVSVIKTEI-------------EHLLSASQPLTGEPLEASTDGFRQGQEGSQYPLTQEFPLNKAQYNKLMQANPECVDCRGRDPDWASISLGVMMCIECSGIHRSMGVHVSKVRSLTLDRWTAPLLELLEKGGNDRANKVWEAYKSDPLFVKIKPDCDRSSRETFIRAKYERRRFLDPPFDSSPEATLHASRRLSVAAREGDLLNALWCLAHGAIVNWSSLEEQGCTAAQEASRRSHVALRELLVNNGWSLD 1119
V+ GYL+KR++N K W RR+F IQN +L YQ++ V V D++LC VK C +D + RF FE++SP ++ +LQA+ E+ ++WV ++ I E L + P T ++++TD +G +G E L + Q + N +C DC DP WASI+LGV++CIECSGIHRS+GVH SKVRSLTLD W LL+L+ + GN N+++EA P K R +E +I+ KY ++FL S+P R AAR DL LAHGA VNW+ ++G T +A + + E L+ NG ++
Sbjct: 265 VVMEGYLFKRASNAFKTWNRRWFSIQNSQLVYQKKLKDALTVV-VDDLRLCSVKPC-EDIERRFCFEVVSPT-KSCMLQADSEKLRQAWVQAVQASIASAYRESPDSCYSERLDRTASPSTSS-IDSTTDSRERGVKG-------ESVLQRVQ---SVAGNSQCGDCGQPDPRWASINLGVLLCIECSGIHRSLGVHCSKVRSLTLDSWEPELLKLMCELGNSTVNQIYEAQCEGPGVRKPTASSSRQDKEAWIKDKYVEKKFLRK-LTSAPAREPPRRWRAHQAARTRDLPALAAALAHGAEVNWADAADEGKTPLVQAVLGGSLIVCEFLLQNGADVN 589
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 251.9 |
| Seed ortholog evalue | 3.6e-64 |
| Seed eggNOG ortholog | 2880.D7FVG0 |
| Preferred name | AGD4 |
| KEGG ko | ko:K12489 |
| KEGG Pathway | ko04144,map04144 |
| Hectar predicted targeting category | other localisation |
| GOs | GO:0003002,GO:0003674,GO:0005096,GO:0005488,GO:0005543,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005798,GO:0005829,GO:0005886,GO:0006810,GO:0006897,GO:0006996,GO:0007010,GO:0007275,GO:0007389,GO:0008047,GO:0008150,GO:0008289,GO:0009653,GO:0009719,GO:0009725,GO:0009733,GO:0009888,GO:0009965,GO:0009987,GO:0010016,GO:0010033,GO:0010051,GO:0010087,GO:0012505,GO:0016020,GO:0016043,GO:0016192,GO:0030133,GO:0030135,GO:0030136,GO:0030139,GO:0030140,GO:0030234,GO:0030695,GO:0031410,GO:0031982,GO:0032501,GO:0032502,GO:0035091,GO:0042221,GO:0043085,GO:0043087,GO:0043167,GO:0043168,GO:0043226,GO:0043227,GO:0043229,GO:0043547,GO:0044093,GO:0044424,GO:0044444,GO:0044464,GO:0048366,GO:0048367,GO:0048731,GO:0048827,GO:0048856,GO:0050790,GO:0050896,GO:0051179,GO:0051234,GO:0051336,GO:0051345,GO:0060589,GO:0065007,GO:0065009,GO:0071840,GO:0071944,GO:0097708,GO:0098657,GO:0098772,GO:0099402,GO:1905392 |
| EggNOG free text desc. | GTPase activator activity |
| EggNOG OGs | COG5347@1,KOG0521@2759 |
| COG Functional cat. | U |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko00001,ko04131,ko04147 |
| Exons | 11 |
| Model size | 1726 |
| Cds size | 879 |
| Stop | 1 |
| Start | 1 |
Relationships
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622932579.976559-UTR-F-serratus_M_contig887:223101..223378 | 1622932579.976559-UTR-F-serratus_M_contig887:223101..223378 | Fucus serratus male | UTR | F-serratus_M_contig887 223102..223378 - |
| 1690964375.9141598-UTR-F-serratus_M_contig887:223101..223378 | 1690964375.9141598-UTR-F-serratus_M_contig887:223101..223378 | Fucus serratus male | UTR | F-serratus_M_contig887 223102..223378 - |
| 1622932580.1338856-UTR-F-serratus_M_contig887:230576..230693 | 1622932580.1338856-UTR-F-serratus_M_contig887:230576..230693 | Fucus serratus male | UTR | F-serratus_M_contig887 230577..230693 - |
| 1690964376.0230658-UTR-F-serratus_M_contig887:230576..230693 | 1690964376.0230658-UTR-F-serratus_M_contig887:230576..230693 | Fucus serratus male | UTR | F-serratus_M_contig887 230577..230693 - |
| 1622932580.1487513-UTR-F-serratus_M_contig887:231605..231683 | 1622932580.1487513-UTR-F-serratus_M_contig887:231605..231683 | Fucus serratus male | UTR | F-serratus_M_contig887 231606..231683 - |
| 1690964376.03872-UTR-F-serratus_M_contig887:231605..231683 | 1690964376.03872-UTR-F-serratus_M_contig887:231605..231683 | Fucus serratus male | UTR | F-serratus_M_contig887 231606..231683 - |
| 1622932580.1642003-UTR-F-serratus_M_contig887:232278..232437 | 1622932580.1642003-UTR-F-serratus_M_contig887:232278..232437 | Fucus serratus male | UTR | F-serratus_M_contig887 232279..232437 - |
| 1690964376.0494304-UTR-F-serratus_M_contig887:232278..232437 | 1690964376.0494304-UTR-F-serratus_M_contig887:232278..232437 | Fucus serratus male | UTR | F-serratus_M_contig887 232279..232437 - |
| 1622932580.189999-UTR-F-serratus_M_contig887:233677..233746 | 1622932580.189999-UTR-F-serratus_M_contig887:233677..233746 | Fucus serratus male | UTR | F-serratus_M_contig887 233678..233746 - |
| 1690964376.063515-UTR-F-serratus_M_contig887:233677..233746 | 1690964376.063515-UTR-F-serratus_M_contig887:233677..233746 | Fucus serratus male | UTR | F-serratus_M_contig887 233678..233746 - |
| 1622932580.209769-UTR-F-serratus_M_contig887:236674..236821 | 1622932580.209769-UTR-F-serratus_M_contig887:236674..236821 | Fucus serratus male | UTR | F-serratus_M_contig887 236675..236821 - |
| 1690964376.0757508-UTR-F-serratus_M_contig887:236674..236821 | 1690964376.0757508-UTR-F-serratus_M_contig887:236674..236821 | Fucus serratus male | UTR | F-serratus_M_contig887 236675..236821 - |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622932580.0040467-CDS-F-serratus_M_contig887:223378..223687 | 1622932580.0040467-CDS-F-serratus_M_contig887:223378..223687 | Fucus serratus male | CDS | F-serratus_M_contig887 223379..223687 - |
| 1690964375.9281213-CDS-F-serratus_M_contig887:223378..223687 | 1690964375.9281213-CDS-F-serratus_M_contig887:223378..223687 | Fucus serratus male | CDS | F-serratus_M_contig887 223379..223687 - |
| 1622932580.0222366-CDS-F-serratus_M_contig887:224080..224184 | 1622932580.0222366-CDS-F-serratus_M_contig887:224080..224184 | Fucus serratus male | CDS | F-serratus_M_contig887 224081..224184 - |
| 1690964375.9391747-CDS-F-serratus_M_contig887:224080..224184 | 1690964375.9391747-CDS-F-serratus_M_contig887:224080..224184 | Fucus serratus male | CDS | F-serratus_M_contig887 224081..224184 - |
| 1622932580.046179-CDS-F-serratus_M_contig887:225689..225814 | 1622932580.046179-CDS-F-serratus_M_contig887:225689..225814 | Fucus serratus male | CDS | F-serratus_M_contig887 225690..225814 - |
| 1690964375.9499507-CDS-F-serratus_M_contig887:225689..225814 | 1690964375.9499507-CDS-F-serratus_M_contig887:225689..225814 | Fucus serratus male | CDS | F-serratus_M_contig887 225690..225814 - |
| 1622932580.0635324-CDS-F-serratus_M_contig887:227568..227699 | 1622932580.0635324-CDS-F-serratus_M_contig887:227568..227699 | Fucus serratus male | CDS | F-serratus_M_contig887 227569..227699 - |
| 1690964375.9604554-CDS-F-serratus_M_contig887:227568..227699 | 1690964375.9604554-CDS-F-serratus_M_contig887:227568..227699 | Fucus serratus male | CDS | F-serratus_M_contig887 227569..227699 - |
| 1622932580.077953-CDS-F-serratus_M_contig887:228110..228191 | 1622932580.077953-CDS-F-serratus_M_contig887:228110..228191 | Fucus serratus male | CDS | F-serratus_M_contig887 228111..228191 - |
| 1690964375.9710407-CDS-F-serratus_M_contig887:228110..228191 | 1690964375.9710407-CDS-F-serratus_M_contig887:228110..228191 | Fucus serratus male | CDS | F-serratus_M_contig887 228111..228191 - |
| 1622932580.0968685-CDS-F-serratus_M_contig887:229755..229878 | 1622932580.0968685-CDS-F-serratus_M_contig887:229755..229878 | Fucus serratus male | CDS | F-serratus_M_contig887 229756..229878 - |
| 1690964375.990579-CDS-F-serratus_M_contig887:229755..229878 | 1690964375.990579-CDS-F-serratus_M_contig887:229755..229878 | Fucus serratus male | CDS | F-serratus_M_contig887 229756..229878 - |
| 1622932580.1176896-CDS-F-serratus_M_contig887:230570..230576 | 1622932580.1176896-CDS-F-serratus_M_contig887:230570..230576 | Fucus serratus male | CDS | F-serratus_M_contig887 230571..230576 - |
| 1690964376.002691-CDS-F-serratus_M_contig887:230570..230576 | 1690964376.002691-CDS-F-serratus_M_contig887:230570..230576 | Fucus serratus male | CDS | F-serratus_M_contig887 230571..230576 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig887.20243.1 >prot_F-serratus_M_contig887.20243.1 ID=prot_F-serratus_M_contig887.20243.1|Name=mRNA_F-serratus_M_contig887.20243.1|organism=Fucus serratus male|type=polypeptide|length=293bp
MQANPECVDCRGRDPDWASISLGVMMCIECSGIHRSMGVHVSKVRSLTLD RWTAPLLELLEKGGNDRANKVWEAYKSDPLFVKIKPDCDRSSRETFIRAK YERRRFLDPPFDSSPEATLHASRRLSVAAREGDLLNALWCLAHGAIVNWS SLEEQGCTAAQEASRRSHVALRELLVNNGWSLDPPSRERPERALTAPQAP CNAPPPPSNARTNKTSRDSAMLSLLLSKLPTTEQRQPPQGGVSTDSGGGS NGSSSGGGTRAGAPQNTSAGAAAAATAAAKVALAFQQQQHRR* back to topmRNA from alignment at F-serratus_M_contig887:223102..236821- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_F-serratus_M_contig887.20243.1 ID=mRNA_F-serratus_M_contig887.20243.1|Name=mRNA_F-serratus_M_contig887.20243.1|organism=Fucus serratus male|type=mRNA|length=13720bp|location=Sequence derived from alignment at F-serratus_M_contig887:223102..236821- (Fucus serratus male) GGAGAGGGGCCAGGTGGGAGACTGCGTGGGGGCGGCGTGGCGGTGGCGAA
CAACGGCAAAGCTGGGGAAGCTGGGGAAGCTGGTGAAGCTGGAGCGGGGT
CGTCTTACGATAGGCTGTGGTCTCCACGACAGGAGCGGGTGATAAAGGCA
AGCTTTGGGCGTGCGACGTGTTTTGCTTTCCCGATAGGCGGCGGATTTGT
TGTGTTGGAATATACGCCTCCGTGTCTTTTGGAAATTTTGATGCGGAGAA
TTTCTGTACAAATTGGGGCCTTTTGATTTATCTCCTTCACAAACGTAAAA
TCAAGCGACGATATTTAGATGGAAAAGGTATCTAATGGTGTCTACTCTGT
GTTTTTTTAATTATTCGCGGAGAAGGTTTATTCCATTTTCCTTTCTTGGC
GAAGATTGTAAACAATATAGAGCTATATACATTATACATAATATATACCA
GTATATATATATAATATATTAACATAATATATATATATCATATATATATA
GTTATCTCTCTTGAGATAATGTCGGTATGGCAGTTGTCCATTTTTGTTTG
GTCCATTACTCGAGTTATCTGAATAGATCGCTTCCGTTACTCGAGTTACC
TCAAATAATACTGGGCCTGTGATAAAGCCATCGGTCAATTGCGGAATCTA
ATAAAAGTTGGGACTGGACTGACGCGATGGTGGCTGACGGTATGTATGAA
TGTATGTATAGCGATGGCGGTTGATGGTATGTATGAATGTATGTATGGCG
ATGGCGGTTGATGGTATGTATGAATGTTTGTATCGCGATGGTGGTTGATG
GTATGTATGAATGTATCTATGGCGATGGCGGTTTACGGTATGTATGCATG
TATGTATGGTCAGCACTTTTAGCAGAGTACCAGTATGCTTCAACCGGATA
TGGCTGCCAATCCTGCTCGTGGTTGGCTGAACAGGAGAAACATTTTTTCT
CCCTGTCCCCGTTCGCGCCTGAAAATTTGGTCTCGCGAGACGGGTTTAGT
CGCCCCGTCCCGCGTCAACCCGCTCATTCTCTCCACACTATAATCAAGCT
GATTATGGTGCTTCGCTTCTCACGGGATTCCTTCCACTTGCCGCGACGGC
CTCCAATTATCCTGCCAACCGCCATCGACTCAGTCTCTAGATTATCAGGT
CGCGCCATTGCGTGCCGATGGCGTTCTCTACGAAGAGTTGGCCGGCACTG
AGCCAGTAGTCTTGAAGATAGTTCTAGTAATAGTAGCGGGTGCTGCCCTT
TGCCATCTCATTATGGGCCAGTTTTATGTGTCCATCCTTTGCCACACCCA
CTGTTTTGTACGTAATGGATATGTGTGCGTGTATGTATGTCGTCTATGGT
CACACATGTAGCAAAAATAAGGACCAGCCGGGTAAGGTTGCCAATCCTGG
TCGTGGTCAGCTGAACAGGGAAAATGAATATTTCCCTGTCCGGGTTCGTT
CCTGAAAATTTGGTCTCGCGAGACGGGTTCGGCAGTCCCGAATCTGTTGC
TTACTTGCGGGATTCCTCCCGAGTTCCGCGGCGGCGTCCATTTATTCATT
TATAATCGCCATACGCCATCGGGTCAGTCTCGAGTTTATCGAGTCACGGA
GTTGCGTACCGATGGCGTGACGCCGGTACTTTGAACAAACCATTTTGTAC
CATTTGTGGGTGTGGGAAGGAGAGGCGCATATTAATTGGTCCACGGTGAC
CTGCCGAGGCAGCACTCGTTCGGAACTATCTTGAGGTTTACTGGCCCTGT
GCCGGCGGACTCCGGGCAGTGAACGTCATCTGTACGCAATTGCGCGACCC
GGTTATCTCGGGACTGACCCGGTGATGTATGGCAGTTTAAGCAAATAAAT
GGACGCCGCCGCGGAACTCGGGAGGAATCCCGTAAGTAAGCACAAATTCA
GCCTGGGTATGGAGATGAGCAGGCTGACGCGGGACGGAACTGCCGAACCC
ATCTCGCGAGACCAAATTCTTAGGCGCGAACGGGGATAGGGAAATATTCA
TTTTCACTGTTCAGCTGACCACGACCAGGATTGGCAACCTTACCCGGTTG
GTCGTTACTTTTGCTATATGTGTGACCATACATATATACAAACTCCCGAG
AGTCCGCCGACAAAGGGTCAGTAAACCTCAAGGTAGTTCCAAACGGGTTT
TGCCTTTGCAGGAGGTCACCATGGACTATGACCAATTAATATGCGCCTCT
CTTTTCCCACACCCCCTATCTAATATTAGTATCAAGGGGGCATGTTCAAA
GTACCGACGGTTACATGTGTGATTAAAGAAAGTATTACGAGTATCATTGC
GCTGTAGATGGCCACCGTCGCGGAAAGCGAGAGGAATCCCGTGAGTAAGT
ACCAGATTCAGCCTGAGTGTGGAGAATGGGCGGGCTGACGTGGGACGGGG
TGACCGAACCCTCCTCGCGAGACTAAACTCTCAGGCGTTATTACGAACGG
CGACAGGGGGAAAAGTTCACTTTCCCTGTTCATCTGACCACGAGCAGGAT
TGGCAACCATATCCGGTTAATGCTGATGTATGCGATGACCGCACGCTAAA
AGGCAATACCTGAAGTCTTTGCTCCAAAGCAAATAGTATCGCTTTTAAAC
TGTGCGGCTCTCCAACGATCGATTCGATAAATACTGGCTGCGACGGGTTG
TTTCCCCTAGTCATGCTCACCATAGAAGGGTTAACCTTACAAACGCATAA
GAGAACAAATTTTTCAATAGGGTTGGTCGTCCGCCGGGTGCAAAGAAAAA
GTGTTCTGGCAGGTGTCCTGGACAGCGCGCGCGACTCAAAGCTTTCGCCG
GTTTTCCGATTTCTATGGTACTGAGTACCTGGTATGTGTTTTAACGACAG
TCCTAATATACTCTTGAGGTACATTCCGATCGTGTGATGAGATACACCAT
AATACGTGAACCTGGGCGCGCGTATGTACTCGACGTGTTGGTATGATAGT
GCTTCGATACGTGATGTAATGTATTCATACCTTATGTACTGCATCTATAA
ACAAAGACAGACATTTGTACTAATGATATTAATACTGTTGTATATGTACC
TCATATTGGGTTCCATGTCGAGCAGGGGGGCTATCTGTGGAAGCGCAGCA
CGAACGTGAGAAAGGATTGGAAGCGACGGTACTTCTTCATACAGGTAAGG
AGGCCAGGGGAGGGGGGGTGGGAGGAGGAAGAAAAAAAGATTTGGTAGTT
TCGAATATACATATTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGC
GTGTGTTTTTTTGTCCTTATCCATTTTTCCCGAATTTTTGCTGTTTACGA
AAATCCCCTATTTTTCCTTCCTCAGTTTTTTCTTTCTTTTTTCGAACCTG
CCCTTCCACCTTTTCAGCAAAAACTTCGCTCGATACTCTACGAGTGGTAG
TTGAAAAGGTCATTCCTATTCCTGCTACCCGCGTCTATTGATAGCGCTTT
GATGCACTTTGACCTTTTTAGCGGGGTAGGGTTCATTCAATGCACACAAA
ATACGAGGAGTTTTTGCAAGTTTCACTATGTCTCACTATTGATATTCATG
CTTGTTGCTTCGCGTTTTTCCCTCGCAGGTTTAATCCGATACTGGTACAG
AGTTGACTTGACTTACTCACGACTTTGTTTTTCCTATACAGAGTTGATTA
TTTTTATTATGTTGTTTTTTAATATTGTTATTATTTTTATTATTATTTGT
TGTTGTTGTTGTTGTTGTTTCTCACATTCAGCGTATTGGTTGCCAACCCG
AAAAAACTACTTTACACGGTGGCCAATCCCGCTCGTGGTCTGCTGAAAAG
GGGAAAAGAGATTTATTGTATTATTATTGTTATTATCATTATCATTATTA
TTATTATTATTATTATTATTATTACTATTATAACTATTATTACTACTATT
ATTATTACCATCGCTATTATTATTATTATTATCATCGCTATTACTGAAGT
ATTACTATTAAGTAGTATTAGTGTTAGTATTAGTAGTATTGTTAGAATTA
TTATTATTAGGGTTATTATTGTTTTGTCATTGTAATTATTACAGTATTAT
TATTATTATTATTAACATTATTAACATTATTACTACTATTATTATTATTA
TTATTAATATTATTATTATTATTATTATTATTATTATTATTATTATTATT
ATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTAT
TATTATTATTATTATTATTATTACTATTATTATTTTTACTGTTATTTTTT
GGGGGTATTCGCTTTATCAACCAAAGCAATTAAAATAAATAATAAAATAA
TAAAAATACAGACGTCTCCACCGCTCTCTTATTCACACACGCCACCCATC
CCCTTCACCCCCGCCCCGGCACCCTTACCTCCAGAACGGCAAACTTTTCT
ATCAGAGACAGGAAGCGTTTGTGAGTCCTCCTGTGCGCGTTTGCGACATC
AAGCTGTGTCACGTCAAGAGCTGTCTCAAGGATAACGACCTACGGTTCTC
TTTCGAGATCATCTCCCCGAAACAGAGGACGTACCTGCTGCAGGCACGAA
GACTCGATTTATGTCTGTCATTTTTCATGTTTTTTTAAATCTAATCTGAA
AGATGTTGTTCTTGTTCTCCATTGTTAATATTATTAGTTTCCCTGCCCCC
GCCCCCCCCCCCCCCCCGCCCCCCGGCAAAGTGTCCCTCGAGTCGGGGAG
TTATTTCGGTTTCTGATTGGTAGCCGCGCCATCGAAATTATTCTCTCTGT
TTTCTGGCTGGCCGCCTTGTTCTCTGGAAACGTTAGTCGTTTTCTGATTG
GGCGCGCTTGTCCCTCGAGTCGGGGAGTTATCTCGGTTTCTGATTGGCCG
CCTTATTTCTCCCTGTTTTTCTGGTTGGTCGTCGCGCGAACGAGAGAAGT
TTCCTCTCGTTTTTTACTGGTTGGTGGCAACGTCAGCTGAAACCGTTCCA
ATGCTTTTTGACCGGTCGCGAGGTGAACATAGTAAGTTCTTCTTGTGGCC
ACCACGCGAACCGAAACGCCTTGTTTTCTGACCAATAGTCTAATTGCCAC
GTGAAACCGCGAACCAGTTCTCTCGTTTCCTGATTCATCGACACGTCAAC
CGTCAACGGTTTATTAACGGTTTATTGGCGGTTCTCAGGCGGAGGATGAA
GAGAAGCATCGGTCGTGGGTGTCCGTGATCAAGACGGAGATCGAGCATCT
GTTGTCTGCTTCCCAGGTGATTTATTGATTTGTTGTGCTGTAGCAGTTTT
ATGTTGGAATTTGTATGCGTTGTGTGTGTGTTGTCATCTCATTTATTCTG
AACGTCAGACTTGGGGATGTACCAGCCGGCGTCCTACAGGAGGAAGATCG
CACAGGATTTCTCATCCACCTTCCTTCTGCGGTGCTTGCCTTGATCCTTA
TCGCGAGAAGGATTCGGCCGTCCCTTTCCGCAATATTTGTAATGTTAGAT
ATGAAATAATATAGGACGGAATATCTTGAGTCTGTATGGCGTTGAGAGGA
GACTTGAGTTAAGAGACACAAATATAAAAGGAACATCGCAAATATCATAC
TGGGGAAATGACAGTCGCAAACTACTGATTTTTTACATTTAGGGCGGGGC
GACCTTGAACTCTTTTGACAAAAGAACCAACATGTATTCGGAAAATAAGC
TGGGAGCCTAGACCAAATATTTACAAGCCATAAAAGATATTAGTAGCCCT
GCCGCTATTGAGTAAATTCGGAGAATGCGGAAAAAAAAGTCAAAACGAAA
CCAGAAAATTGGTTAAAGCGCGCAGGCAGATGGGAACCTAGGGCCTAGAG
GTGTGGTTAGGCGGCGGCGGATGGCAGGGTGGCTTAAAACGTGTTCCGTC
GGTTTTCTTGTTTTCTATGGTATATTTTTTCACTATTTTGCTTACAAATC
TCAAAGTAGGAGTCGAGTTGTTTTATGTTTTTCAAGACACAATAGCCACA
ATCTACCTATCCCCCTCCTAACCCCCCCCCCTCCCCGACATTACCTAAAA
CAAAACAAGGACGGTGTTTGCCACGTTAACCCCCTTCTGTGATTTGGTCC
ATCCTCACGCCGCATTCCCTTGTCACCCCCCGCCACGGTCGTCCTTGTGG
CCTTTTCTGTGGCTGGTGGTTGGGGCAGCCTTTGACGGGGGAGCCTTTGG
AGGCTTCGACCGACGGTTTTCGGCAAGGGCAGGAGGGTTCGCAGTACCCG
CTGACGCAAGAGTTTCCACTCAACAAGGCTCAGTACAACAAGCTCATGCA
GGCGCGTTTCGCACGGACAAAATTCCACGACCTTGCTGATATATATATAT
ATATATATATTTATTTTATTTTTTCTCTCGACGATGATTGGAAGGAAGGA
GGGAGTGGCCCCGCGTTTATTTGTTGGACGGGGTTATTTGTTTTTTGGTG
TTACGAAAAAATTACTATTATAGTGGCAGGCCCTCTACTGCGCAAGTAGT
ACCCACGGTTTTGGGTTTCCTTGAAAGTTTTCTGGCGTTTTCGTTGGTTT
GCCCACCCTCCGCTGGTCGGAGAAATGGGGATATTTTTTTCCTTTCTATT
GAATTTGTGGAAGGTATGGGAAGATGCGCATTTTTCCAGACCGGGAACTT
TTGTAGCTGTCAAAATAAAATAATATATATATATGTATATGGTATATATT
TTGCATCTCTTCATGTTTGTTATTTTTGGTAAGTCAAAGTGCTGCGGATT
GAGCCAGGCCTTGCATTACATGACGGATAAAAAAATACCTCCGCGTCTAT
TAGCGCTAAAGGGCAGATAAAAAAAAACTGGCTATCGGAAGTCCCGTATC
AAATCGTCTTGAAGTTGTCCTCGAAGTTTGTATATTTGTTTCAATATTTT
TGTTAGTTTGTTTTTTCGTGTGGGTTTGTGTATCTGCCTGTTTTTTTTGT
TTTCCTCTTCCTATGTTGACGTTTTATGTTTTGATTCACACAGGCAAATC
CAGAGTGCGTTGACTGTCGTGGGAGAGATCCGGACTGGGCGAGCATCAGC
CTGGGGGTCATGATGTGCATAGAGTGCTCTGGGATACACCGCTCCATGGG
AGTACACGTCTCAAAGGTGTGCTGGATTGTGGTGCGGTTTGGTTTTTGGC
GGGTCCATTCAGGGGTCTTGGCTCTGCCATCCCCTTGCTCTTCTCGCCTA
CAAGTTCTCTACGAAATCCCTTCGCTGGTTCAAAAGTTGTACACACAAAC
ATTACCTTACACATTTTTTTGCTTTGGCGTTTCTCGGGCGGAAACCGAGC
GAGTGATGCGTCAATCCATCCAACTGCCTGGGTTAGCATGTCGGTGTAAG
CATCTCACGCACTCGGGGCCTTTCTGATTATTCCCCTCCCTAAGCATCCC
TAAGATACCACACCCCTTCCGAGGGGGCGGGGGGGGGGGGGGGGGATCGC
TTTTACGCCGATATTTTTTGTCCTGATTCTACTATACTATACTTTTTTAC
TGCAGCACAAAAGCTGTGAACAGTTGTTGTTTTGATGGGGCGTGTAGAAC
TCTAGAGGGAAGATATTTGTATAAACGTACAATTTTAAATGTGGATCTAT
GGTCACACATATGGCAAGAGTATGGATCAACCGGGTAAGGTTGCCAATCC
TGGTCGTGGTCAGCTGAACAGGAAAAATGAATAATTCCCTGTCCCCGTTT
GTGCCTGAGAATTTGGTCTTGCGAGGCGGGTTCGGCAGTCCCGTCCCGCG
TCAGCATGCTCATCTCCATACTCAGGCTGAATCTGGTGCGTACTGATGGG
ATTATTCCCGAGTATCGCGGCGGCGTCCATTTATTTATTTAAACCGCCAT
ACGCCATCGGGCCAGTCCCGAGTTTATCGGGTGACGCAATTGCGTACCGA
TGGTGTTCACTGCCGAGAGTCCGCCGGCACAGGGCCAGTAAACCTCAAGG
AGGCAGTTCCGAACGAGTGCTGCCTTGGCAGGTCACCATGGACTATGACC
AATTAATTTGTGCCTCTCTTTTACCAAACCCACTATACTATTATTAGTAT
AAAGTGGGCATGTTCAAAGTACCGGCAACCTTGTGACCCGTTGACCTCTG
TGTACCTCTTATGAGACCACAAGCGGGGATCGGCATATCTGATAGGTTCG
GGCTGATTTTTTGTTATCGTCTTGCCGTTGGTCTTCAGTGGCAAGGACAA
AAAATATGGTACGCTGAAAGTACGAATCAATCAACCAATCAAATCTATCA
ATCCGTGTATTCTATCTTGCAAGGTATCAAAAGTGTCTACTACTACATTT
GTAGACTTATGTATGTACGCGTTGTCATCACTCACTTACGACAGAGTGTG
TCTCAGCCGTGTAAGGTTGCCAATCCTTCTCGTGATCAGCCTCAAAAGGG
GATTTTTTTTTTTTTTCCCTGTCTCCGCTCGCGCCTGAATGTTTGGTCTG
GCGGGACAGGTTCTTCGGCTGTCTCGTCCCGCGTCAGGCTGCTCATTGTC
CGCTCTCATGCTAAACCTGGTGCTTACTCACGGGATTGTCCTGCCGCTGG
ATGTTTTGTGTGGAATCAAGGATGCTTTACAGTCATTTCGGCTTCAAGTG
CCCCACCCTCACACGTTGATTCCAATTTTTTCAATGCAAATTTCCGTGTA
ATATCAAATATCGGCGCGCACCGTATTCAGGTGAGATCGCTGACGCTGGA
CAGGTGGACGGCGCCGCTTCTGGAGCTGCTGGAAAAAGGGGGTAACGATC
GAGCCAACAAGGTGCTTAGGAAATAATGCAACATCTAAAAAACTATGAAT
GTATACTCTTATCTAGATGAGCTGTTTTGATGCAAAGCGATACTCCTCCA
TAGCTTTATAGCTTTATTCCATTTTTGTCCGGCGCAAATATGGTTGTTAT
CTATATTTCATAATATTTTCCTGCGCTTCCCAAACTTGTGTATCTTGTGT
TTGTACCAGGTTGGTTGAGTATGTGTTCCCATAGTTATCTTGAATTCTCA
TGTGCGGTCTTTCTTCAAAAATAAAAAAAAGAAGGCTTCCCGTCCCTTTT
TCGTTGTTGGTTTATTTTTTTTCCTTCCTATTTTAATATTTCAATTAAAT
GACAATACGTATGGTTCCAACAATCCTCATCATATGTCTTCCCCTCTCCC
CTCTTCCTCATCCCCACCCCAGGTGTGGGAAGCCTACAAGAGCGATCCGC
TGTTCGTCAAGATTAAACCGGACTGCGATCGTTCTTCGAGAGAAACATTC
ATCAGGGCAAAGTACGAGCGCCGAAGATTCCTCGACCCACCCTTCGATTC
CAGGTGCGCCGGGGTTGGAGACGCTGTCTACTTTTGATTCATGCCTCATT
TTACTGAAACCATGCTGGACATATTTCGATTTGTTTTCTGTTTTTGTTCC
CATTTATTCTGGGCGTCAAGTTGGTTGGATGTACCAGCCAAGGTTGTGGT
GTGTTAAATATCATCGTTTGTTGTCCTGTCTGGAGGCGTTCCGAAATACT
TTTGCACTCGAACGTTTTTTTTTTTTTTTTTTTCCATCTCACTTTTACCG
AAGGGCCCAATCAACGTGCTATTTAATACGGGTACAGTAGGTTTTACCGA
TCCCGACCTGTAATGCAACGTTGAAAATCCTTGTTGCTCGTAAGGATCGT
TACATTTCTCGTAAGGACCGTTACATTTTTTTCGTTTAACCAATGATTGA
AGTTTTACTTACTCGCGTTCCACAATAAAAATAAATAAAAATAAAAAACT
GGTAACCTCCCCCCCCGTGATCCGCACCATTATATCGTCGAGAACGAAGT
TATTCACTGTTTTATACTCCATTTAGAGTGTACTGAGATAAGAGCATTCG
ACCCTGTTTTTTAGAAGAGGATTATAAGCGGTATGATATTCCTCATGAAG
TGTCCCTCATGAAGTGTTGCATAATATGTCTTGCGTGTGACCCTCCCCTC
CGATAGTTAGGAAAACCTCTTGGCGAGTCGCTTTTTATGACTTTGGTAGA
TAGACAGCACGTTCAGATAGAAGATCAGTCTTGTCTGTATTAATGTTGTA
TTAATAGCTACAGTAGTAATTTTGATTCGAAATCCTGGCAGCACTCCAGC
CAGTAGAAATCTTAGTTGGTACATATACCTGTAAACATCGTCTTGACGCG
GATATCTTCCCGATGTTTTCGGGTGTATGGACGTGGCAAGGATTAAGTTG
TCGCGATCTGGATCCCTGTCGAGTGATTAGCGGGTTACCTTACCACCGTG
ATGTTACTCGTTGACCTTGGTACCTCTTTGTGGCCACGTACCGGATTGGC
ATCAGCGTATGCTACTGGGTACAGTTAAGGCAAGATCTCGGTTAAATAGT
CAAGAATACAGACACAGAGGGTTTCGTATAAATGTTTCGTTGATCCCTTA
ATAACAGCATCCCTTGAGAGGACCAATGCGAGTGGCATAGAATGTCCAGG
ACGACAGAGCCGGATTGCGCGGTTGTGTGCAATTTCATAAATAAAATAAT
AAAAACTCTCTCTCTTCTCTTGAGTCTAACGAAAAACGTCTTTTACTAAT
AGCCCGAAAAGGAAACACTGCATTTTATCAGGTAAGATAGGGTAGCTATC
GCTATACGCTCGCTAAAGGATAGTTTGGTAACTATCGTCAGCTGTACACA
GGTGTTGGTTTTTAATCAAACAGGGCAAGTAATTCGAAGTTCCACGTTCC
CGCCCTGAACACAGGTGTTGGTTTAACCAAACAGGGGGGGCACATCACGA
AAAGGAACATATTTTGATACACCCGAGCTCAAATTGATACAGCACACAGA
TTAGAAGCTCGCTAAACGCTCGCAATAATGTAAGTTCCGTACAGTACACG
GTCAAATCCATGCAGTTCTTATGATTTTTGGGGGTACAATGAAATAAGGC
CAAACGACGATACAGTTCCAAGGCATGGTTTGGGACTGAGGGTCTCATTC
TATTACTGGTATAAATTACCAGTTACAGGGTGCTTGCCATGTGGAAACGG
CTCACTGGACAACCCTTTCCCCCGTCTTCCCCCCCCACCCCCGTGTCGTC
ACTACAGCCCAGAAGCAACGCTTCACGCAAGCCGAAGACTCTCAGTCGCC
GCGCGAGAGGGGGACTTGCTGAACGCTCTATGGTGCTTGGCCCACGGAGC
GATCGTTAATTGGTCAAGCCTCGAGGAACAGGGTGAGTCCCCCTATATTA
TAAATATATATAAACTTTTTGAAATGCCCATTTCTGATCCCTTCTTCCGA
AACCGTTGGCGTCGGCAGGAGGACACCGGAGTTCGAATGACACACCGTAC
CAAACAAACCAGTACATGGTGTACATGGGCTTTCTTTTTTGACCCTTTTA
GCTACTACTTGGATACAAGTTTTGTGGACTAAAACATTTTTTTGTAAAAA
GAAAACTCGGTCGGTTACGAAGAGGGTCAAAACCTTTCACGTTGGAGTGC
TAAAGGATGACGAGATTTCGCGCGTTGGGTCGTGTGTTTTATTTTTGTTG
TAATTTTTTGGGGGAAAAAAAGAGGCGTTTTTTTGTGGTTACAATCCAGA
GCTATATCATTTCTTACAATATTGGCTTCCTTCCTGTCTGGGTACGTGGG
GTGAGCGAGCTGACGCGGAAAAAACGGCACAGCCGAAACTGTGTCTCGCG
ACGGAAACAAGTTGTCGGGTGCGCGATCGGGCGGGGTACAGGGGAAACAT
TTTTTACTTTTCCTCTGGAGGTGGTCGCGAACAGGAGTTGAACACCAATC
ATGCTTGTACCCGGTCGGTGCCCAATCTACTACAGCATGTGATGGCCACA
CCTTATCTCGAGGCTTGCAGAAGCTCACAGGTTTTGCCAAGGCTGTTGAC
CCTCCATTAGGGAAGAGATCCTTTCGTGGAAACCTTTCCGCATGCTTTTA
TCGGGGATGAGTGGGCGTCGTGAAGAGCGCACGTGCCTGCACGTGGATTC
AGGAACCGCGATGAGCATGACGTCGTCGTGTATTTTCCGAGCCGTTTACT
GTGGTTGACATCACCAGGCCGCCCGATTCTGTCCCCTTTTCTTGTTGACT
GTTAAATCGAACTGTACTGTTTCATCCACTCAAAGTAATGCTAAAAAAAA
TAGAGTAGACCCAGGGGACAAGCAAAATTTACCTATGATATGTTTACTTA
CAGCCGATGGACCTCATAATTACCATCCTGCCTGTGGTCACAAAGGATCT
TCCCATCTCTCCTGCCGCGGTTCACGCCTTACAGCTTTTATCGCGATGCA
AGTTCAGCACTCTTACAACTCAACTCGTCAACCAATGGTTGAATTTTACT
TAACTCACTTTCCCACGCTTTCCGTTACGAAAGAAAGAACACAAAACCTA
CTCTAGGTAAGAATCGAACTCACGACTTCCGCACTAGCAGGTGTGCAGGT
TACCTACTAGACCACTCGGGCGCCGTTATCCATCCAATATCCGCTATTCC
CCATACACCACACCACTTGAGGTTAAGATTTGCTAAAGAAGTGAAGTGGG
CATTAAACGTATGATAGACTACTGTGGTCCTGGAGGTTTCGGAGGAAACA
GGCATCGATTATTTGGGAGCACCGCGCGGCAATGCCATGCTAGCTAACAC
CACACAATGTAGAGTCACGTCCACGCATTCCGCTGCCACGTGATGTCTTA
TTGGCATGTCGATCGCCGGTGTGTCCCTGTCTCGAAGGGTGCACGGCCGC
TCAGGAGGCTTCGAGAAGATCTCATGTGGCACTGCGGGAGCTACTTGTGA
ACAATGGTTGGAGTCTCGACCCTCCCTCCAGAGAAAGGCCGGTACGTTTT
CGACCCTGACTATTCCCTCCTTCCCCTGTTATGACCGATGGCTTTAACAC
TCTTGAAAATGTTAGGTCAACACTCTGCGATGTGATTTATATCATAGTAT
CGTGAGATGTATTATACAGGCAGTAATGCTGTAGTTTAATGCGATACAAG
GACTATTATTATAGTAGGCAGTGCTAATTATTGTTGTACACGCGTACGTC
TGTTGAGTAATTTATATCACTGCAGTAGTCCAAAGTGTGTTTTACATACA
CGCTGTGTTATATACCTCGTGGTGGTGAGTGTTGCTCCATCTGTTAATGT
TATTCTCACTTCGCTCGTCTTCCCCCCCCCCCCGACCCCGACCCCGCGGT
TGACATTGTATCGTACGGTACACGTTGCCGGCAGGAGCGTGCCTTGACCG
CGCCCCAAGCGCCCTGCAATGCACCCCCACCGCCCAGCAACGCGAGGACC
AACAAAACCTCCCGGGACTCGGCTATGCTTTCCCTCCTCCTGTCGAAGCT
GCCGACGACAGAGCAACGACAACCACCCCAGGGAGGCGTGAGCACCGATA
GTGGTGGCGGCAGCAATGGCAGTAGTAGTGGGGGAGGGACAAGAGCAGGC
GCGCCACAGAACACCTCCGCAGGCGCCGCAGCTGCCGCTACTGCTGCGGC
GAAAGTTGCACTCGCTTTCCAGCAGCAACAGCATCGACGCTGAGCTGAGT
GAAGCGAGCCTGGGACCTCTATATAATGAGGGCCTCTTGCAGCCTTTTCC
AACTTTTCTTTCCTTTTCCCGCCAGTCCGTCGCCATAAGCGATGTTCGCG
CAACTGGTTTGTATCGTGATTACTCGTGTGCGTCTCCTCTCCTTTGTGTG
GGCATATTATGTCATCACCTTGAGCATGTGGTGTTACAAAAAAAACAAGT
TTTGCCTGTGTAGGTGCTGGGGCTGTAGGTCTGGCCACCACCAGTACCCC
AACGGCGATGGAGAGGAGTA back to topCoding sequence (CDS) from alignment at F-serratus_M_contig887:223102..236821- >mRNA_F-serratus_M_contig887.20243.1 ID=mRNA_F-serratus_M_contig887.20243.1|Name=mRNA_F-serratus_M_contig887.20243.1|organism=Fucus serratus male|type=CDS|length=1758bp|location=Sequence derived from alignment at F-serratus_M_contig887:223102..236821- (Fucus serratus male) ATGCAGATGCAGGCAAATCCAGAGTGCGTTGACTGTCGTGGGAGAGATCC GGACTGGGCGAGCATCAGCCTGGGGGTCATGATGTGCATAGAGTGCTCTG GGATACACCGCTCCATGGGAGTACACGTCTCAAAGGCAAATCCAGAGTGC GTTGACTGTCGTGGGAGAGATCCGGACTGGGCGAGCATCAGCCTGGGGGT CATGATGTGCATAGAGTGCTCTGGGATACACCGCTCCATGGGAGTACACG TCTCAAAGGTGAGATCGCTGACGCTGGACAGGTGGACGGCGCCGCTTCTG GAGCTGCTGGAAAAAGGGGGTAACGATCGAGCCAACAAGGTGAGATCGCT GACGCTGGACAGGTGGACGGCGCCGCTTCTGGAGCTGCTGGAAAAAGGGG GTAACGATCGAGCCAACAAGGTGTGGGAAGCCTACAAGAGCGATCCGCTG TTCGTCAAGATTAAACCGGACTGCGATCGTTCTTCGAGAGAAACATTCAT CAGGGCAAAGTACGAGCGCCGAAGATTCCTCGACCCACCCTTCGATTCCA GGTGTGGGAAGCCTACAAGAGCGATCCGCTGTTCGTCAAGATTAAACCGG ACTGCGATCGTTCTTCGAGAGAAACATTCATCAGGGCAAAGTACGAGCGC CGAAGATTCCTCGACCCACCCTTCGATTCCAGCCCAGAAGCAACGCTTCA CGCAAGCCGAAGACTCTCAGTCGCCGCGCGAGAGGGGGACTTGCTGAACG CTCTATGGTGCTTGGCCCACGGAGCGATCGTTAATTGGTCAAGCCTCGAG GAACAGGCCCAGAAGCAACGCTTCACGCAAGCCGAAGACTCTCAGTCGCC GCGCGAGAGGGGGACTTGCTGAACGCTCTATGGTGCTTGGCCCACGGAGC GATCGTTAATTGGTCAAGCCTCGAGGAACAGGGGTGCACGGCCGCTCAGG AGGCTTCGAGAAGATCTCATGTGGCACTGCGGGAGCTACTTGTGAACAAT GGTTGGAGTCTCGACCCTCCCTCCAGAGAAAGGCCGGGTGCACGGCCGCT CAGGAGGCTTCGAGAAGATCTCATGTGGCACTGCGGGAGCTACTTGTGAA CAATGGTTGGAGTCTCGACCCTCCCTCCAGAGAAAGGCCGGAGCGTGCCT TGACCGCGCCCCAAGCGCCCTGCAATGCACCCCCACCGCCCAGCAACGCG AGGACCAACAAAACCTCCCGGGACTCGGCTATGCTTTCCCTCCTCCTGTC GAAGCTGCCGACGACAGAGCAACGACAACCACCCCAGGGAGGCGTGAGCA CCGATAGTGGTGGCGGCAGCAATGGCAGTAGTAGTGGGGGAGGGACAAGA GCAGGCGCGCCACAGAACACCTCCGCAGGCGCCGCAGCTGCCGCTACTGC TGCGGCGAAAGTTGCACTCGCTTTCCAGCAGCAACAGCATCGACGCTGAG AGCGTGCCTTGACCGCGCCCCAAGCGCCCTGCAATGCACCCCCACCGCCC AGCAACGCGAGGACCAACAAAACCTCCCGGGACTCGGCTATGCTTTCCCT CCTCCTGTCGAAGCTGCCGACGACAGAGCAACGACAACCACCCCAGGGAG GCGTGAGCACCGATAGTGGTGGCGGCAGCAATGGCAGTAGTAGTGGGGGA GGGACAAGAGCAGGCGCGCCACAGAACACCTCCGCAGGCGCCGCAGCTGC CGCTACTGCTGCGGCGAAAGTTGCACTCGCTTTCCAGCAGCAACAGCATC GACGCTGA back to top
|