mRNA_F-serratus_M_contig885.20231.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig885.20231.1 vs. uniprot
Match: A0A6H5JL39_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL39_9PHAE) HSP 1 Score: 162 bits (411), Expect = 1.950e-45 Identity = 81/197 (41.12%), Postives = 113/197 (57.36%), Query Frame = 1
Query: 7 HVIMCETKRPPEAIDCPDECSHNINTICDDRCGSGRYGDWQCSWRRMGDKCRFCFRDIAAARLADELARKRGGRVIMCDTHEPPPVEGGGDNAVGEHLAERRNLADATR--DPVPMEVEDLASAADSSSPEEPASPVDPPALQFPDMS-REQICVFLPGFFEFFHETNATIASIRKFMPGVRVTIATHPTDFHVFSR 588
HV+MC T+ PP C C I+T+CD RCGSG YGD C+WR +G CR CF D++AA LADE + +GGRVI+C+T EPP ++G RRN + +R +P + + S D +D P S R Q+C F+ G+ EF ET +++ S+ +FMP +RV + THP+DFHVF+R
Sbjct: 169 HVVMCGTRNPPSGPSCSAGCEGTIDTVCDYRCGSGLYGDLHCNWRGLGKTCRLCFHDVSAAHLADEAVKAQGGRVILCNTLEPPL-------SIGSEAEARRNKSGGSRLAPSIPENHDPIVSQTDGI--------IDDPVPTILSSSMRGQMCAFMRGYSEFLPETTSSVRSVLEFMPAMRVAVVTHPSDFHVFNR 350
BLAST of mRNA_F-serratus_M_contig885.20231.1 vs. uniprot
Match: A0A6H5JUA9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUA9_9PHAE) HSP 1 Score: 154 bits (388), Expect = 7.210e-42 Identity = 76/195 (38.97%), Postives = 109/195 (55.90%), Query Frame = 1
Query: 7 HVIMCETKRPPEAIDCPDECSHNINTICDDRCGSGRYGDWQCSWRRMGDKCRFCFRDIAAARLADELARKRGGRVIMCDTHEPPPVEGGGDNAVGEHLAERRNLADATR--DPVPMEVEDLASAADSSSPEEPASPVDPPALQFPDMSREQICVFLPGFFEFFHETNATIASIRKFMPGVRVTIATHPTDFHVFS 585
HV+MC T+ PP C C I+T+CD RCGSG YGD C+WR +G CR CF D++ A LADE + +GGRVI+C+T EPP ++G RRN + +R +P + + S D DP R Q+C F+ G+FEF ET +++ S+ +FMP +RV + +HP+DFH+ +
Sbjct: 171 HVVMCGTRNPPSGPSCSAGCEDIIDTVCDYRCGSGLYGDLHCNWRGLGKTCRLCFHDVSVAYLADEAVKAQGGRVILCNTLEPPL-------SIGTEAIARRNKSGGSRLASFIPENHDGIVSQTDGIFD-------DPLPTILSSSMRGQMCAFMRGYFEFLSETTSSVRSVLEFMPAMRVAVVSHPSDFHLLT 351
BLAST of mRNA_F-serratus_M_contig885.20231.1 vs. uniprot
Match: A0A6H5L0V3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0V3_9PHAE) HSP 1 Score: 157 bits (396), Expect = 8.310e-41 Identity = 81/203 (39.90%), Postives = 106/203 (52.22%), Query Frame = 1
Query: 7 HVIMCETKRPPEAIDCPDECSHNINTICDDRCGSGRYGDWQCSWRRMGDKCRFCFRDIAAARLADELARKRGGRVIMCDTHEPPPVEGGGDNAVGEHLAERRNLADATR---------DPVPMEVEDLASAADSSSPEEPASPVDPPALQFPDMSREQICVFLPGFFEFFHETNATIASIRKFMPGVRVTIATHPTDFHVFSR 588
HV+MC T+ PP C C + I+T+CD RCGSG YGD C+WR +G CR CF D +AA LADE + +GGRVI+C+T EPP ++G RRN + R DP+ + S DP Q+C F+ G+FEF ET ++ S+ FMP +RV I THP DFHVF+R
Sbjct: 143 HVVMCGTRNPPSGPSCSAGCENTIDTVCDYRCGSGLYGDLHCNWRGLGKTCRLCFHDDSAAYLADEAVKAQGGRVILCNTLEPP-------RSIGSEAEARRNNSGGGRLASSIPENDDPIGWQTNGTIS--------------DPVPTVLSSSMGGQMCAFMRGYFEFLSETIISVRSVLDFMPAMRVAIVTHPRDFHVFNR 324
BLAST of mRNA_F-serratus_M_contig885.20231.1 vs. uniprot
Match: D7FKL9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKL9_ECTSI) HSP 1 Score: 152 bits (385), Expect = 2.510e-39 Identity = 78/199 (39.20%), Postives = 106/199 (53.27%), Query Frame = 1
Query: 7 HVIMCETKRPPEAIDCPDECSHNINTICDDRCGSGRYGDWQCSWRRMGDKCRFCFRDIAAARLADELARKRGGRVIMCDTHEPPPVEGGGDNAVGEHLAERRNLADATRDPV-----PMEVEDLASAADSSSPEEPASPVDPPALQFPDMSREQICVFLPGFFEFFHETNATIASIRKFMPGVRVTIATHPTDFHVFSR 588
HV+MC+T +PP A C C +T+CD RCGSGRYGD+ C WR +G CR CF ++ AA LADE A+ GGRV+MC+THEPPP G N E ADA P P E + + + PA+ +R IC F+ G+ +++S+ +FMPG+R+ I THP +F F+R
Sbjct: 262 HVVMCDTTQPPPASSCTTACQDASDTVCDYRCGSGRYGDFNCDWRGLGSTCRLCFNELPAAHLADEFAKAHGGRVVMCNTHEPPPPIGSYTNDKEEENG--HGSADAGNGPTLVAPAPQERNNKEIVSGDEESQGPAA-----TEYIGTTTRGHICAFMRGYSRLLPMMKVSVSSVLQFMPGMRIGITTHPREFEEFNR 453
BLAST of mRNA_F-serratus_M_contig885.20231.1 vs. uniprot
Match: D7FRS3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRS3_ECTSI) HSP 1 Score: 152 bits (383), Expect = 4.640e-39 Identity = 84/201 (41.79%), Postives = 112/201 (55.72%), Query Frame = 1
Query: 7 HVIMCETKRPPEAIDCPDECSHNINTICDDRCGSGRYGDWQCSWRRMGDKCRFCFRDIAAARLADELARKRGGRVIMCDTHEPPPVEGGGDNAVGEHLAERRNLADATRDPVPMEVED------LASAADSSSPEEPASPVDPPALQF-PDMSREQICVFLPGFFEFFHETNATIASIRKFMPGVRVTIATHPTDFHVFSR 588
HV+MC+T +PP+A C C +T+CD RCGSGRYGD+ C+WR + CR CF + + A LADE+A+ GGRV+MC+THEPP G A E R AD T D +P V L + AD S+ DP A + +R IC F+ GF E ET +++S+ + MPG+RV IAT F F+R
Sbjct: 176 HVVMCDTTQPPQASRCTTACQDMADTVCDYRCGSGRYGDFNCNWRGVDSTCRLCFHETSVALLADEVAKAHGGRVVMCNTHEPPLPIGSKTKATVEDTGHRS--AD-TGDGLPSAVSSQESKRKLLAVADESN--------DPAATAYIGTTTRGHICAFMRGFVELLPETKVSVSSVLELMPGMRVAIATDAAGFQEFAR 365
BLAST of mRNA_F-serratus_M_contig885.20231.1 vs. uniprot
Match: A0A6H5KI77_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KI77_9PHAE) HSP 1 Score: 151 bits (382), Expect = 6.760e-39 Identity = 75/194 (38.66%), Postives = 108/194 (55.67%), Query Frame = 1
Query: 7 HVIMCETKRPPEAIDCPDECSHNINTICDDRCGSGRYGDWQCSWRRMGDKCRFCFRDIAAARLADELARKRGGRVIMCDTHEPPPVEGGGDNAVGEHLAERRNLADATRDPVPMEVEDLASAADSSSPEEPASPVDPPALQFPDMSREQICVFLPGFFEFFHETNATIASIRKFMPGVRVTIATHPTDFHVFSR 588
HVIMC+T PP+A C C +T+CD RCG+G YGD+ C W +G CR CF++ + A AD +A+ RG RVI+C THEPP G + + L P +E + +D S+ A+ + +Q+CVFL G+F+ ET +++S+ +FMPG+RV +ATHP DF VF+R
Sbjct: 173 HVIMCDTGEPPQASSCSPACRSMADTVCDSRCGTGLYGDYNCDWLGLGLTCRRCFQETSVAEFADSIAKTRGQRVILCATHEPPLSVGSLKSHIKAKLGHGGGXXGDANAPTTFPLE--SDTSDRST-----------AVYVGSATIKQMCVFLRGYFDLLAETRLSVSSVLEFMPGMRVAVATHPRDFQVFNR 353
BLAST of mRNA_F-serratus_M_contig885.20231.1 vs. uniprot
Match: D8LCC7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCC7_ECTSI) HSP 1 Score: 147 bits (371), Expect = 1.970e-37 Identity = 78/205 (38.05%), Postives = 118/205 (57.56%), Query Frame = 1
Query: 7 HVIMCETKRPPEAIDCPDECSHNINTICDDRCGSGRYGDWQCSWRRMGDKCRFCFRDIAAARLADELARKRGGRVIMCDTHEPPP--VEGGGDNAVGEHLAERRNLADATRDPVPMEVEDLASAADSSSPE--------EPASPVDPPALQFP-DMSREQICVFLPGFFEFFHETNATIASIRKFMPGVRVTIATHPTDFHVFSR 588
HVIMC+T RPPEA C +C+ +TICDDRC SG +G++ C+WR G+ CRFCF D AAA +AD+ A++ GGRVIMC+THEPP + D E + A + + + ++ ++P EP +PV P +++ D+ R ++C F ++ + ET A++ S+ F+PG+RV +A F VF+R
Sbjct: 360 HVIMCDTLRPPEASTCSLKCATKKDTICDDRCKSGLFGNYNCNWRDHGEHCRFCFDDTAAAIVADKAAKRTGGRVIMCNTHEPPVELTQAELDALEKERIEHVMEAAASKMANAAKQEKKTSNTKGHANPGGKTAGDEGEPDAPVHPAMIEYSKDLLRGEMCAFATAYYLYLRETEASVRSLAHFLPGMRVRLAVDTIHFSVFNR 564
BLAST of mRNA_F-serratus_M_contig885.20231.1 vs. uniprot
Match: A0A6H5L138_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L138_9PHAE) HSP 1 Score: 136 bits (342), Expect = 4.390e-34 Identity = 75/186 (40.32%), Postives = 103/186 (55.38%), Query Frame = 1
Query: 34 PPEAIDCPDECSHNINTICDDRCGSGRYGDWQCSWRRMGDKCRFCFRDIAAARLADELARKRGGRVIMCDTHEPP-PVEGGGDNAVGEHLAERRNLADATRDPVPMEVEDLASAADSSSPEEPASPVDPPALQFPDMSREQICVFLPGFFEFFHETNATIASIRKFMPGVRVTIATHPTDFHVFSR 588
P A + SH + CD RCGSG YGD C+WR +GD CR CF++ A LADE+A +G RVI+C+THEPP E + + E R A+ + + EDL S A+ S SR ++C F+ G+FEF ET +++ S+ +FM G+R+ IATHP DFHVF+R
Sbjct: 8 PDTASIASERLSHQV---CDYRCGSGLYGDLYCNWRDLGDTCRLCFKEGLPAHLADEVAIAQGARVILCNTHEPPIRSEPEMERLIDESERSRTAAANRSLEEFEESEEDLVSPAEIS-------------------SRGEMCAFMGGYFEFMSETTSSVHSVLEFMEGMRIAIATHPMDFHVFNR 171
BLAST of mRNA_F-serratus_M_contig885.20231.1 vs. uniprot
Match: A0A6H5KID1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KID1_9PHAE) HSP 1 Score: 127 bits (320), Expect = 1.280e-30 Identity = 72/171 (42.11%), Postives = 95/171 (55.56%), Query Frame = 1
Query: 85 ICDDRCGSGRYGDWQCSWRRMGDKCRFCFRDIAAARLADELARKRGGRVIMCDTHEPPPVEGGGDNAVGEHLAERRNLADATRDP--VPMEVEDLASAADSSSPEEPASPVDPPALQF-PDMSREQICVFLPGFFEFFHETNATIASIRKFMPGVRVTIATHPTDFHVFSR 588
+CD RCGSGRYGD+ C WR +G CR CF ++ AA LADE A+ GRV+MC+THEPPP G N E+ ADA P V + ++ S EE P A ++ +R QIC F+ G+ T ++S+ FMPG+R+ IATHP+DF F R
Sbjct: 25 VCDYRCGSGRYGDFNCDWRGLGSTCRLCFNELPAAHLADEFAKAHDGRVVMCNTHEPPPPIGSYTNKEEEN---GHGSADAGNGPTLVAPAPHERSNKEIISGNEESQGPS---ATEYIGTTTRGQICAFMRGYSRLLPITKVAVSSVLHFMPGMRIGIATHPSDFEEFHR 189
BLAST of mRNA_F-serratus_M_contig885.20231.1 vs. uniprot
Match: A0A6H5JKY0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKY0_9PHAE) HSP 1 Score: 122 bits (307), Expect = 7.570e-29 Identity = 79/247 (31.98%), Postives = 121/247 (48.99%), Query Frame = 1
Query: 4 KHVIMCETKRPPEAIDCPDECSHNINT------------------------ICDDRCGSGRYGDWQCSWRRMG--------------DKCRFCFRDIAAARLADELARKRGGRVIMCDTHEPPPVEGGGDNAVGEHLAERR--NLADATRDPVPMEVEDLASAADSSSPE-----------EPASPVDPPALQFPD-MSREQICVFLPGFFEFFHETNATIASIRKFMPGVRVTIATHPTDFHVFSR 588
+HVIMC+T RPPEA C +C+ +T ICDDRC SG +G++ C+WR G + CRFCF D AAA +ADE A++ GGRVIMC+THEPP A + L ++R ++ +AT + + +++ EP +PV P +++ + + R ++C F + + ET A++ S+ F+PG+RV +A F VF+R
Sbjct: 357 RHVIMCDTLRPPEASTCSLKCALKKDTARTNSSMRPPEPHVNPVWLYVPPQICDDRCESGLFGNYNCNWRDHGALLWTQMILFTPAPEHCRFCFDDTAAAIVADETAKRMGGRVIMCNTHEPPVER---TQAEMDALEKKRIEHVMEATASKMANAAKQGKKTSNTKGHANPGGKAAGDEGEPDAPVHPAMIEYSENLLRGEMCAFSTAYHLYLRETEASVRSLAHFLPGMRVRLAVDTIHFSVFNR 600 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig885.20231.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig885.20231.1 >prot_F-serratus_M_contig885.20231.1 ID=prot_F-serratus_M_contig885.20231.1|Name=mRNA_F-serratus_M_contig885.20231.1|organism=Fucus serratus male|type=polypeptide|length=192bp MCETKRPPEAIDCPDECSHNINTICDDRCGSGRYGDWQCSWRRMGDKCRFback to top mRNA from alignment at F-serratus_M_contig885:127803..128750+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig885.20231.1 ID=mRNA_F-serratus_M_contig885.20231.1|Name=mRNA_F-serratus_M_contig885.20231.1|organism=Fucus serratus male|type=mRNA|length=948bp|location=Sequence derived from alignment at F-serratus_M_contig885:127803..128750+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig885:127803..128750+ >mRNA_F-serratus_M_contig885.20231.1 ID=mRNA_F-serratus_M_contig885.20231.1|Name=mRNA_F-serratus_M_contig885.20231.1|organism=Fucus serratus male|type=CDS|length=1152bp|location=Sequence derived from alignment at F-serratus_M_contig885:127803..128750+ (Fucus serratus male)back to top |