mRNA_F-serratus_M_contig883.20218.1 (mRNA) Fucus serratus male
|
Overview
Homology
BLAST of mRNA_F-serratus_M_contig883.20218.1 vs. uniprot
Match: A0A6H5K8I5_9PHAE (ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8I5_9PHAE) HSP 1 Score: 240 bits (613), Expect = 3.250e-75 Identity = 123/187 (65.78%), Postives = 154/187 (82.35%), Query Frame = 1
Query: 1 QVGIGGNHTLSAVDLSYAIQISVKGSKEKESKTLIHPLTFSIKPREMVAIMGASGAGKSTLLDILAQRIPFNKAS---------PGRR-GEMEA----YLLDGSAIQAKEFKRMSGYVMQDDALYPLLSVKETLQFAAELRIPKLSKADKYKLVEETITLLKLQNCEDTIVGNEIRRGISGGKWRQL 519
++G GGNHTLS +DL+Y++Q++ K +KEK++KTL+HP+TFSIKP EM+AIMGASGAGKSTLLD+LAQR+PF++AS P R G + A YLL+G AIQ KEFKRMSGYVMQDDALYPLL+V+ETL+FAAELRIP ++KADKY+LVEETI LKL NC DT +GNEI RG+SGG+ R++
Sbjct: 38 KIGTGGNHTLSVMDLTYSVQVTDKDTKEKQTKTLLHPVTFSIKPTEMLAIMGASGAGKSTLLDVLAQRVPFSEASGRTDYLPTTPTRPCGALPAVEGSYLLNGQAIQPKEFKRMSGYVMQDDALYPLLTVRETLRFAAELRIPNMTKADKYELVEETIRQLKLTNCADTKIGNEIHRGVSGGEKRRV 224
BLAST of mRNA_F-serratus_M_contig883.20218.1 vs. uniprot
Match: D7FP97_ECTSI (ABC transporter domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP97_ECTSI) HSP 1 Score: 245 bits (625), Expect = 1.020e-74 Identity = 121/173 (69.94%), Postives = 148/173 (85.55%), Query Frame = 1
Query: 1 QVGIGGNHTLSAVDLSYAIQISVKGSKEKESKTLIHPLTFSIKPREMVAIMGASGAGKSTLLDILAQRIPFNKASPGRRGEMEAYLLDGSAIQAKEFKRMSGYVMQDDALYPLLSVKETLQFAAELRIPKLSKADKYKLVEETITLLKLQNCEDTIVGNEIRRGISGGKWRQL 519
++G GGNHTLS +DLSY++QI+ K +KEK++KTL+HP+TFSIKP EM+AIMGASGAGKSTLLD+LAQR+PF++ +YLLDG AIQ KEFKRMSGYVMQDDALYPLL+V+ETL+FAAELRIP ++KADKY+LVEETI LKL NC DT +GNEI RGISGG+ R++
Sbjct: 76 KIGTGGNHTLSVMDLSYSVQITDKDTKEKQTKTLLHPVTFSIKPTEMLAIMGASGAGKSTLLDVLAQRVPFSEVEG-------SYLLDGQAIQPKEFKRMSGYVMQDDALYPLLTVRETLRFAAELRIPNMTKADKYELVEETIRQLKLTNCADTKIGNEIHRGISGGEKRRV 241
BLAST of mRNA_F-serratus_M_contig883.20218.1 vs. uniprot
Match: A0A835ZIY6_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZIY6_9STRA) HSP 1 Score: 186 bits (471), Expect = 1.730e-52 Identity = 99/169 (58.58%), Postives = 130/169 (76.92%), Query Frame = 1
Query: 13 GGNHTLSAVDLSYAIQISVKGSKEKESKTLIHPLTFSIKPREMVAIMGASGAGKSTLLDILAQRIPFNKASPGRRGEMEAYLLDGSAIQAKEFKRMSGYVMQDDALYPLLSVKETLQFAAELRIPKLSKADKYKLVEETITLLKLQNCEDTIVGNEIRRGISGGKWRQL 519
GG++TL A DLSY ++I K KE + KT++HP+ F IKP++++AIMGASGAGKSTLLDILA RIP A+ G YLL+G+ + A FKR+SGYVMQDDALYPLL+V+ETLQ+AA LRIP LS+ DK+++VE+TI LKL C DTI G++ RG+SGG+ R++
Sbjct: 44 GGSYTLEAKDLSYTVKI--KEGKEMKDKTIVHPVNFVIKPKQLLAIMGASGAGKSTLLDILATRIP-RSATDGE------YLLNGAPVAAN-FKRLSGYVMQDDALYPLLTVRETLQYAALLRIPNLSRKDKWEVVEDTIRALKLTACADTICGDDRHRGVSGGEKRRV 202
BLAST of mRNA_F-serratus_M_contig883.20218.1 vs. uniprot
Match: A0A835YQT3_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQT3_9STRA) HSP 1 Score: 170 bits (430), Expect = 7.760e-47 Identity = 91/169 (53.85%), Postives = 124/169 (73.37%), Query Frame = 1
Query: 13 GGNHTLSAVDLSYAIQISVKGSKEKESKTLIHPLTFSIKPREMVAIMGASGAGKSTLLDILAQRIPFNKASPGRRGEMEAYLLDGSAIQAKEFKRMSGYVMQDDALYPLLSVKETLQFAAELRIPKLSKADKYKLVEETITLLKLQNCEDTIVGNEIRRGISGGKWRQL 519
G + L A DL+Y +++ V K+ + K ++HP+ F+IKPR+++AIMGASGAGKSTLLDILA RIP + GE YL++ + + FKR+SGYVMQDDALYPLL+V+ETLQ+AA LRIP L +A K ++VEETI LKL C +TIVG++ RG+SGG+ R++
Sbjct: 33 GTGYVLEARDLTYKVKVKV--GKDMQEKVIVHPVNFTIKPRQLMAIMGASGAGKSTLLDILATRIPQSSVD----GE---YLMNDQPVSST-FKRVSGYVMQDDALYPLLTVRETLQYAALLRIPGLGRAQKKEVVEETIKALKLSACANTIVGDDRHRGVSGGEKRRV 191
BLAST of mRNA_F-serratus_M_contig883.20218.1 vs. uniprot
Match: A0A6S9KQH8_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9KQH8_HETAK) HSP 1 Score: 154 bits (388), Expect = 1.320e-40 Identity = 86/155 (55.48%), Postives = 111/155 (71.61%), Query Frame = 1
Query: 55 IQISVKGSKEKESKTLIHPLTFSIKPREMVAIMGASGAGKSTLLDILAQRIPFNKASPGRRGEMEAYLLDGSAIQAKEFKRMSGYVMQDDALYPLLSVKETLQFAAELRIPKLSKADKYKLVEETITLLKLQNCEDTIVGNEIRRGISGGKWRQL 519
I+ V K KE KTLIHP + IK +EMV IMG SGAGKSTLLDILA RI K+S RG ++ DG AI +KR+SGYVMQ DALYPLL+V+ET FAAELRIP ++A+K ++V +T+ LKL+ DT+VG+E+ RG+SGG+ R++
Sbjct: 52 IEYEVFQKKSKERKTLIHPCSGKIKAQEMVCIMGQSGAGKSTLLDILAARI---KSSDQLRGSLK---YDGVAI-GSNYKRVSGYVMQSDALYPLLTVRETFMFAAELRIPGKTRAEKAEVVAQTLRALKLEGVADTVVGDELTRGLSGGEKRRV 199
BLAST of mRNA_F-serratus_M_contig883.20218.1 vs. uniprot
Match: A0A7C9ECH2_OPUST (Adenosinetriphosphatase (Fragment) n=1 Tax=Opuntia streptacantha TaxID=393608 RepID=A0A7C9ECH2_OPUST) HSP 1 Score: 120 bits (300), Expect = 9.280e-30 Identity = 69/169 (40.83%), Postives = 109/169 (64.50%), Query Frame = 1
Query: 28 LSAVDLSYAIQISVKGS----KEKESKTLIHPLTFSIKPREMVAIMGASGAGKSTLLDILAQRIPFNKASPGRRGEMEAYLLDGSAIQAKEFKRMSGYVMQDDALYPLLSVKETLQFAAELRIPK-LSKADKYKLVEETITLLKLQNCEDTIVGNEIRRGISGGKWRQL 519
LS +L+Y++ +S K S E K L++ ++ + E++A++GASG+GKSTL+D LA RI R + LL+G +++K K +S YVMQ+D L+P+L+V+ETL F+AE R+P+ LSKA K V+ I L L+N +T++G+E RG+SGG+ R++
Sbjct: 100 LSFHNLTYSVNVSHKPSCFQAGEATEKVLLNDISSEAREGEILAVLGASGSGKSTLIDALADRI-------SRDSLKGSVLLNGEVLESKLLKVISAYVMQEDLLFPMLTVEETLMFSAEFRLPRSLSKAKKKARVQALIDQLGLRNAANTVIGDEGHRGVSGGERRRV 261
BLAST of mRNA_F-serratus_M_contig883.20218.1 vs. uniprot
Match: A0A5D3AGU2_GOSMU (ABC transporter domain-containing protein n=1 Tax=Gossypium mustelinum TaxID=34275 RepID=A0A5D3AGU2_GOSMU) HSP 1 Score: 119 bits (298), Expect = 1.300e-29 Identity = 67/166 (40.36%), Postives = 109/166 (65.66%), Query Frame = 1
Query: 28 LSAVDLSYAIQISVK-GSKEKESKTLIHPLTFSIKPREMVAIMGASGAGKSTLLDILAQRIPFNKASPGRRGEMEAYLLDGSAIQAKEFKRMSGYVMQDDALYPLLSVKETLQFAAELRIPK-LSKADKYKLVEETITLLKLQNCEDTIVGNEIRRGISGGKWRQL 519
LS +LSY++++ K G K + SK L++ ++ + E++A++GASG+GKSTL+D LA RI + +G + L+G +++K + +S YVMQDD L+P+L+V+ETL F+AE R+P+ LSK K V+ I L L+ T++G+E RG+SGG+ R++
Sbjct: 75 LSFTNLSYSVKVRKKWGKKVENSKVLLNNISGEAREGEIMAVLGASGSGKSTLIDALANRI----SKESLKGSIT---LNGETLESKLLRVISAYVMQDDLLFPMLTVEETLMFSAEFRLPRSLSKKKKKARVQALIDQLGLRKAAQTVIGDEGHRGVSGGERRRV 233
BLAST of mRNA_F-serratus_M_contig883.20218.1 vs. uniprot
Match: A0A1Y1IEV1_KLENI (ABC transporter G family n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IEV1_KLENI) HSP 1 Score: 121 bits (304), Expect = 7.260e-29 Identity = 69/155 (44.52%), Postives = 102/155 (65.81%), Query Frame = 1
Query: 58 QISVKGSKEKESKTLIHPLTFSIKPREMVAIMGASGAGKSTLLDILAQRIPFNKASPGRRGEMEAYLLDGSAIQAKEFKRMSGYVMQDDALYPLLSVKETLQFAAELRIPK-LSKADKYKLVEETITLLKLQNCEDTIVGNEIRRGISGGKWRQL 519
+I K ++ K L++ ++ + E++A++G SGAGKST LD ++ RI + G +L++G+ + A F+R+SGYVMQDD LYPLLSV+ETL F+A LR+P +S A+K VE+TI L L +C DT +GNE RGISGG+ R++
Sbjct: 63 KIGSKTAEGSRQKILLNDVSTVARHGEILAVVGPSGAGKSTFLDAISGRIDGSDLEGG-------FLVNGAPMDAS-FRRLSGYVMQDDQLYPLLSVRETLMFSARLRLPSSMSAAEKAARVEKTIAELGLASCADTRIGNESARGISGGEKRRV 209
BLAST of mRNA_F-serratus_M_contig883.20218.1 vs. uniprot
Match: A0A7C9EBF7_OPUST (Adenosinetriphosphatase (Fragment) n=1 Tax=Opuntia streptacantha TaxID=393608 RepID=A0A7C9EBF7_OPUST) HSP 1 Score: 120 bits (300), Expect = 1.470e-28 Identity = 69/169 (40.83%), Postives = 109/169 (64.50%), Query Frame = 1
Query: 28 LSAVDLSYAIQISVKGS----KEKESKTLIHPLTFSIKPREMVAIMGASGAGKSTLLDILAQRIPFNKASPGRRGEMEAYLLDGSAIQAKEFKRMSGYVMQDDALYPLLSVKETLQFAAELRIPK-LSKADKYKLVEETITLLKLQNCEDTIVGNEIRRGISGGKWRQL 519
LS +L+Y++ +S K S E K L++ ++ + E++A++GASG+GKSTL+D LA RI R + LL+G +++K K +S YVMQ+D L+P+L+V+ETL F+AE R+P+ LSKA K V+ I L L+N +T++G+E RG+SGG+ R++
Sbjct: 87 LSFHNLTYSVNVSHKPSCFQAGEATEKVLLNDISSEAREGEILAVLGASGSGKSTLIDALADRI-------SRDSLKGSVLLNGEVLESKLLKVISAYVMQEDLLFPMLTVEETLMFSAEFRLPRSLSKAKKKARVQALIDQLGLRNAANTVIGDEGHRGVSGGERRRV 248
BLAST of mRNA_F-serratus_M_contig883.20218.1 vs. uniprot
Match: UPI001263B53B (ABC transporter G family member 6-like n=2 Tax=Pistacia vera TaxID=55513 RepID=UPI001263B53B) HSP 1 Score: 120 bits (302), Expect = 1.520e-28 Identity = 75/191 (39.27%), Postives = 115/191 (60.21%), Query Frame = 1
Query: 4 VGIGGNHTLSAV-------DLSYAIQI-----------SVKGSKEKESKTLIHPLTFSIKPREMVAIMGASGAGKSTLLDILAQRIPFNKASPGRRGEMEAYLLDGSAIQAKEFKRMSGYVMQDDALYPLLSVKETLQFAAELRIPK-LSKADKYKLVEETITLLKLQNCEDTIVGNEIRRGISGGKWRQL 519
V GGN SA +LSY+++I S + SKE SK L++ ++ + E++A++GASGAGKSTL+D LA RI R+ + L+G A++++ K +S YVMQDD LYP+L+V+ETL +AAE R+P+ +SK K V+ I L L+ +T++G+E RG+SGG+ R++
Sbjct: 42 VNNGGNGATSACPFVLSFNNLSYSVRIRPKLLFAPIRKSEEESKEIRSKVLLNNISGEAREGEVIAVLGASGAGKSTLIDALAGRIE-------RKSLKGSVTLNGEALESRLLKVISAYVMQDDLLYPMLTVEETLMYAAEFRLPRTVSKEKKKARVQALIDQLGLRRAMNTVIGDEAHRGVSGGERRRV 225 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig883.20218.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig883.20218.1 >prot_F-serratus_M_contig883.20218.1 ID=prot_F-serratus_M_contig883.20218.1|Name=mRNA_F-serratus_M_contig883.20218.1|organism=Fucus serratus male|type=polypeptide|length=175bp QVGIGGNHTLSAVDLSYAIQISVKGSKEKESKTLIHPLTFSIKPREMVAIback to top mRNA from alignment at F-serratus_M_contig883:187033..189672- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig883.20218.1 ID=mRNA_F-serratus_M_contig883.20218.1|Name=mRNA_F-serratus_M_contig883.20218.1|organism=Fucus serratus male|type=mRNA|length=2640bp|location=Sequence derived from alignment at F-serratus_M_contig883:187033..189672- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig883:187033..189672- >mRNA_F-serratus_M_contig883.20218.1 ID=mRNA_F-serratus_M_contig883.20218.1|Name=mRNA_F-serratus_M_contig883.20218.1|organism=Fucus serratus male|type=CDS|length=1050bp|location=Sequence derived from alignment at F-serratus_M_contig883:187033..189672- (Fucus serratus male)back to top |