mRNA_F-serratus_M_contig882.20198.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig882.20198.1 vs. uniprot
Match: D7G2R7_ECTSI (Protein RFT1 homolog n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2R7_ECTSI) HSP 1 Score: 702 bits (1811), Expect = 4.940e-238 Identity = 455/789 (57.67%), Postives = 519/789 (65.78%), Query Frame = 1
Query: 328 MLLALVQRASTFILNVILQRAMLSGADSSSTGQTNRTTSALEAYGAAAITLELISSTALFLSREPFRVALARSRVPL-DASTSSGGTADGAS----------RRKDEDSRKEADRQRFVNTAWLSAPVGVAFAAVVRLAYPWIIRNDAFQAVPENRQAATLVCLAAALELLCEPLALIFQHRLLVDVRVKAEAAAVLVLGVARYLLVTRARLGVLSFGYAQLLHSATLAAAYVTFATRDIAR-----ESTKPVRN------ATVNEPLEKPAEAEELLPERGFTRVKGWLPQRP-RPSRSDERNGVAVSAWVDLGQLWLASTLAGQSILKHVLTEGDKIVLARATGLGRACDDDXXXXXXXXXXXXXXXXXCGHGGSLYEQGVYAIASGYGSLVARLLFQPLEEAARLMFSKLGAEEGTASEFEASRVPAGQEAVETM------------QNRESGGGGDGR-------------RLREKMAALLATLLKLVLFAGLMFVCFGFHYTETLLRLLLAKKGGSDGGDGSFAVSEVARVLSWYCVYVLFLAANGMCEAFACAVARGRQLTGMGAGLVVSFAAFWVLVGPLTERFGTRGLVIANAAGMACRVVVSATFIRRFFLQ-ASPKDPGID---------GGRSS---------------TDAPPISRDINISTPRRKNLWREVAAGALPHPVVLCAMAVSSAVAHASSPAA------TGPWSIVAAFKHILVGVLCLGLTSALFARFEQKFLRDMRSLWAARRGR-PSSARDPSSG--TDFDGRQKMD 2448
MLLA VQRASTF+LNV+LQRAMLS A S + N SALE YGAAAITL+LISSTALFL+REPFRVALARS+VP+ D T G G + R + EA R+RFVNTAW+SAPVG+AFA +VRLAYPW+IRND FQ V ENRQAA+LVCLAAA+EL+CEPLALIFQ+RLLVDVRV+AEAAAVLVLGV+RYLLVTRA +GVLSFGYAQL HS TL YV FA +D+AR E+T P AT P A++ + GF RV+GWLP RP R SDE S VD G+L LA LAGQS+LKHVLTEGDKIVLARAT C C GG+LYEQGVYAIASGYGSL ARLLFQPLEEAARLMFSKLGAE G + + TM Q R+ GGGG G+ RLR KMA+LLATLLKLVL AGL+FVCFGFHYTETLLRLLLA KGG G G AVSEVARVLSWYCVYVLFLAANGMCEAFACAVA+G QLTGMGAGLV SFAAFWVLVGPLT RFGTRGLV+ANAAGMACRV+ S FIRRFFL+ +P P + G SS + APP + T ++NLWREV GA+PHP V+ MA+SSA A+A+SPAA G + AA KH+ VG++C +T+A+F + E FLR++ +LWAARR P + R SG DG K D
Sbjct: 1 MLLAFVQRASTFVLNVLLQRAMLSAAASDTRQPRN---SALEEYGAAAITLDLISSTALFLAREPFRVALARSKVPIADEKTWVAGGNKGVAPGQQLTGERERARXXXXXXEAYRRRFVNTAWISAPVGLAFAGLVRLAYPWVIRNDDFQGVEENRQAASLVCLAAAVELMCEPLALIFQYRLLVDVRVRAEAAAVLVLGVSRYLLVTRAGMGVLSFGYAQLFHSVTLFTWYVLFAVKDVARARAGAETTLPXXXXXTLVAATGQPPGTARPLAQDGGDDEGFARVRGWLPSRPIRDDDSDE------SGLVDSGKLRLAWALAGQSLLKHVLTEGDKIVLARATSSEHGCH-------------RHSGGGCSQGGTLYEQGVYAIASGYGSLAARLLFQPLEEAARLMFSKLGAEAGESRQGAVPPAVTATSKALTMGATHSSLGRGGGQGRQDGGGGYGQEGDSTDGAANGKLRLRAKMASLLATLLKLVLMAGLVFVCFGFHYTETLLRLLLAGKGG---GGGFSAVSEVARVLSWYCVYVLFLAANGMCEAFACAVAQGGQLTGMGAGLVASFAAFWVLVGPLTGRFGTRGLVMANAAGMACRVICSGLFIRRFFLRRTTPATPSLKPAAVGDRAASGESSRLSPSGSPHRSPSEPSRAPPNGGERRKKTATKRNLWREVVTGAVPHPGVVSIMALSSAAAYATSPAARHVAGGNGGAPLDAA-KHVGVGLVCFLVTAAVFVKCEGAFLRELGALWAARRPPGPDAGRGAGSGDAAALDGADKSD 763
BLAST of mRNA_F-serratus_M_contig882.20198.1 vs. uniprot
Match: W7U1L1_9STRA (Protein RFT1 homolog n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U1L1_9STRA) HSP 1 Score: 243 bits (620), Expect = 1.660e-65 Identity = 221/685 (32.26%), Postives = 312/685 (45.55%), Query Frame = 1
Query: 457 YGAAAITLELISSTALFLSREPFRVALARSR-VPLDASTSSGGTADGASRRKDEDSRKEADRQRFVNTAWLSAPVGVAFAAVVRLAYPWIIRNDAFQAVPEN----RQAATLVCLAAALELLCEPLALIFQHRLLVDVRVKAEAAAVLVLGVARYLL---VTRARLGVLSFGYAQLLHSATLAAAY----------------VTFATRDIARESTKPVRNATVNEPLEKPAEAEELLPERGFTRVKGWLPQRPRPSRSDERNGVAVSAWVDLGQLWLASTLAGQSILKHVLTEGDKIVLARATGLGRACDDDXXXXXXXXXXXXXXXXXCGHGGSLYEQGVYAIASGYGSLVARLLFQPLEEAARLMFSKLGAEEGT------ASEFEASRVPAGQEAVETMQNRESGGG-GDGRRLREKMAALLATLLKLVLFAGLMFVCFGFHYTETLLRLLLAKK----GGSDGGDGSFAVSEVARVLSWYCVYVLFLAANGMCEAFACAVARGRQLTGMGAGLVVSFAAFWVLVGPLTERFGTRGLVIANAAGMACRVVVSATFIRRFF--LQASPKDPGIDGGRSSTDAPPISRDINISTPRRKNLWREVAAGALPHPVVLCAMAVSSAVAHASSPAATGPWSIVAAFKHILVGVLCLGLTSALFARFEQKFLRDMRSLWAARRGRPSSA 2400
+G A++ L+L+ +TALFLSRE FR+ L R+ V L + T + ++FVN +W+ +G +++ LA+ N+ +N RQ L CLAA+LE L EP L+ Q LL +R +E A L+ + ++L V +L+FG+AQ+ +S L Y + A+++ A ++T + T PL A + LP+ P S + WV+ L LA L GQS KH+LT+GDKIVL+ G S Y QG+YA+A YGSL ARLLFQPLEE+ RLMF++L A G A + + + +V T R G G+ + + L+ L+K V+ GL+F CFGF+YT LLRLLL + G G +GS VLSWYC+YVLFLA NGM EAF AVA + + +GA VSFA F L P GT GLV+AN AGM R++ S F+R +F + ++ K G +G SST +ST RE PHPVVL + + A +AS + KH++ G + EQ F D++S+ GR A
Sbjct: 24 FGLASVPLDLLLNTALFLSREGFRLTLGRTTLVGLSSDT--------------------CEFRQFVNLSWVPVLLG-PLVSLLSLAFLPSNHNEDIGGKGQNADALRQTGLLFCLAASLESLSEPAYLVCQGCLLTTLRSASEGLATLIRSIITFVLLVWVLPPEKALLAFGFAQVGYSVVLILVYWGYLIYVSLKGGGQTGIPGASKEAAMDTTST--SQTTQTPLRLLA-------------LSHLLPRAPSSSSA---------LWVEPSHLALAFALTGQSFFKHLLTQGDKIVLSI-------------------------------GSSHYSQGLYALAQNYGSLAARLLFQPLEESGRLMFARLAAGNGGVVGEDGAEAADDKKXXKTETSVATDHRRGRGAEPGESAASQAMLKVLVGALVKTVILVGLVFACFGFNYTRVLLRLLLPGRRWETGAGVGAEGS------GEVLSWYCLYVLFLAVNGMTEAFVYAVATQQDVVRLGALAAVSFAVFAGLTFPFIRWHGTVGLVLANCAGMLVRILFSIHFVRAYFDGVVSTRKQDGGEGHVSST---------MLST-------REKQPDMFPHPVVLASFVAAFAATYASDKTLVSVDEVEPVLKHVVFGGMVFTGVLGSILWTEQDFFEDLKSIRRLATGRREEA 610
BLAST of mRNA_F-serratus_M_contig882.20198.1 vs. uniprot
Match: A0A835YPZ4_9STRA (Protein RFT1 homolog n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPZ4_9STRA) HSP 1 Score: 224 bits (571), Expect = 3.190e-60 Identity = 206/579 (35.58%), Postives = 259/579 (44.73%), Query Frame = 1
Query: 748 VPENRQAATLVCLAAALELLCEPLALIFQHRLLVDVRVKAEAAAVLVLGVARYLLVTRARLGVLSFGYAQLLHSATLAAAYVTFATRDIARESTKPVRNATVNEPLEKPAEAEELLPERGFTRVKGWLPQRPRPSRSDERNGVAVSAWVDLGQLWLASTLAGQSILKHVLTEGDKIVLARATGLGRACDDDXXXXXXXXXXXXXXXXXCGHGGSLYEQGVYAIASGYGSLVARLLFQPLEEAARLMFSKLGAE-------EGTASEFEASRVPAGQEAVETMQNRESGGGGDGRRL-------------------------------REKMAALLATLLKLVLFAGLMFVCFGFHYTETLLRLLLAKKGGSDGGDGSFAVSEVARVLSWYCVYVLFLAANGMCEAFACAVARGRQLTGMGAGLVVSFAAFWVLVGPLTERFGTRGLVIANAAGMACRVVVSATFIRRFFLQASPKDPGIDGGRSSTDAPPISRDINISTPRRKNLWREVAAGALPHPVVLCAMAVSSAVAHASSPAATGPWSIVAA-FKHILVGVLCLGLTSALFARFEQKFLRDMRSL 2367
+P + QAA LVCLAAALEL CEP LIFQ RL++ VRV+AEAAAVL+LGVA+YLLVTRA LGV++FGYAQLLHS L AY TR++ + S + A E + + F R WLP S + Q+ L + L GQS KH+LTEGDKIVLARA G + QGVYAIA YGSLVARL+FQP+EE+ARLMF++LG+ G EA E + + GG L + ++ LL+ LLK VL G +F GFH+T LL LL+A GG GGD + + EVA VLSWYC+YV LA NGMCEAF A+A Q RF + GM R+ SA FI RFF SP+ P+ GALPHP A A ++ + S+ AA + A H+ G L +A+ E+ F +R L
Sbjct: 2 LPISLQAAGLVCLAAALELACEPAVLIFQWRLMLGVRVRAEAAAVLILGVAKYLLVTRAGLGVVAFGYAQLLHSCALIVAYAAAVTREVRQSSVRVAAAAAALRGSEGASAKGDGGGAGPFGRAAFWLPGGAWGQGSTQ-------------QVRLVALLGGQSAFKHLLTEGDKIVLARAHG--------------------------------HRQGVYAIAHNYGSLVARLVFQPVEESARLMFARLGSSGGGNGSTSGDDGHAEADHKAQLAELLSVLLESVLVVGGVFAALGFHHSARCFFAPRAQIHDFSVCLGSTHTFGPQAQLGELLSVLLKSVLLVGGVFAALGFHHTRALLSLLMA--GGRAGGDAT--LGEVADVLSWYCLYVPCLAVNGMCEAFVYALAGAAQ-----------------------RRFRDPPSP-PPSPGMLFRIAYSARFIVRFF--GSPR--------------PL-------------------LGALPHPAAALAFAGAAVASGFSAAAAARAGNTPRAQLLHVCRGAAAFALLAAVCWATEKPFRARLRGL 472
BLAST of mRNA_F-serratus_M_contig882.20198.1 vs. uniprot
Match: A0A8H7QCR3_9FUNG (Oligosaccharide translocation protein RFT1 n=1 Tax=Umbelopsis vinacea TaxID=44442 RepID=A0A8H7QCR3_9FUNG) HSP 1 Score: 172 bits (437), Expect = 9.150e-42 Identity = 181/609 (29.72%), Postives = 260/609 (42.69%), Query Frame = 1
Query: 292 VVGAAVRGGSLLMLLALVQRASTFILNVILQRAMLSGADSSSTGQTNRTTSALEAYGAAAITLELISSTALFLSREPFRVALARSRVPLDASTSSGGTADGASRRKDED---------SRKEADRQRFVNTAWLSAPVGVAFAAVVRLAYPWIIRNDAFQAVPENRQAATLVCLAAALELLCEPLALIFQHRLLVDVRVKAEAAAVLVLGVARYLLVTRA-------RLGVLSFGYAQLLHSATLAAAYVTFATRDIARESTKPVRNATVNEPLEKPAEAEELLPERGFTRVKGWLPQRPRPSRSDERNGVAVSAWVDLGQLWLASTLAGQSILKHVLTEGDKIVLARATGLGRACDDDXXXXXXXXXXXXXXXXXCGHGGSLYEQGVYAIASGYGSLVARLLFQPLEEAARLMFSKLGAEEGTASEFEASRVPAGQEAVETMQNRESGGGGDGRRLREKMAALLATLLKLVLFAGLMFVCFGFHYTETLLRLLLAKKGGSDGGDGSFAVSEVARVLSWYCVYVLFLAANGMCEAFACAVARGRQLTGMGAGLVVSFAAFWVLVGPLTERF---GTRGLVIANAAGMACRVVVSATFIRRFFLQASPKD 2061
V+ ++V G S L+LL L R TF L+ I+ R S+ E G A++ LEL+ ST LFLSRE FR AL R GG + K E S E Q+ N A++ +G+ + Y I ++ P R + L L+A EL+ EPL ++ + L +RV E VLV V + L R GVL+F AQ +S + Y F VRN +N G T + PR + +G + W D L L+ TL QS+LKHVLTEGDK++++ A D +QGVYA+ YGSL+ R+LF PLEE R +FSKL S+ + +++ QN R+ E A +L T+ K + GL+F+CF +YT TL+ LL+ + + VLS+YC YV + NG+ EAF AVA +QL + ++V F+ +V G L F G GL++AN + R++ S FIR++FL +D
Sbjct: 19 VLSSSVAGASYLILLQLASRMLTFALHQIVVRY-----------------SSAETLGIASVKLELLLSTILFLSREGFRCALLR-----------GGNSQTTQEIKSEKPVSKDAVLVSSAEGQVQKITNLAYVPMIIGLVTTLTACVYYLSSIDDETALKYPFYRTSIVLFGLSAYCELIIEPLYIMALNNLYFKLRVSVEGICVLVRCVLTFGLTVLGSNGSGTNRYGVLAFAVAQFAYSLVMVCGYAGFFINK--------VRNGQIN----------------GKTTL-------PRKLVAVNEDGTTRTFWFDRELLDLSVTLTKQSLLKHVLTEGDKMLVS-------ALSSDK------------------------DQGVYALVVNYGSLIVRILFGPLEETVRTLFSKL------LSDID-------DQSLTKSQN----------RVLETSARILITIFKFHILLGLIFICFATNYTATLIDLLVGSAWSQN--------TNAPLVLSFYCAYVPVMGINGVSEAFVQAVATEQQLARLSKFMIV-FSLIFVSSGVLFMHFMHLGAIGLILANIVNLGSRIIYSWIFIRKYFLGKRGQD 505
BLAST of mRNA_F-serratus_M_contig882.20198.1 vs. uniprot
Match: B8CE33_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CE33_THAPS) HSP 1 Score: 178 bits (451), Expect = 9.740e-42 Identity = 204/701 (29.10%), Postives = 291/701 (41.51%), Query Frame = 1
Query: 460 GAAAITLELISSTALFLSREPFRVALARSRVPL-----------DASTSSGGTADGASRRK--------DEDSRKEADR-------QRFVNTAWLSAPVGVAFA--AVVRLAYPWIIRNDAFQA----VPENRQAATLVCLAAALELLCEPLALIFQHRLLVDVRVKAEAAAVLVLGVARY----------------LLVTRARLGV-----------LSFGYAQLLHSATLAAAYVTFATRDIARESTKPVRNATVNEPLEKPAEAEELLPERGFTRVKGWLPQRPRPSRSDERNGVAVSAWV-------DLGQLWLASTLAGQSILKHVLTEGDKIVLARATGLGRACDDDXXXXXXXXXXXXXXXXXCGHGGSLYEQGVYAIASGYGSLVARLLFQPLEEAARLMFSKLGAEEGTASEFEASRVPAGQEAVETMQ--NRESGGGGDGRRLREKMAALLATLLKLVLFAGLMFVCFGFHYTETLLRLLLAKKGGSDGGDGSFAVSEVARVLSWYCVYVLFLAANGMCEAFACAVAR-GRQLTGMGAGLVVSFAAFWVLVGPLTERFGTRGLVIANAAGMACRVVVSATFIRRFFLQASPKDPGIDGGRSSTDAPPISRDINISTPRRKNLWREVAAGALPHPVVLCAMAVSSAVAHASSPA------ATGPWSIVAAFKHILVGVLCLGLTSALFARFE 2337
G A I LEL+ TALF+ RE FR+ L ++ + DA+ +S G ++RK DE+ ++ R QR +N +WLS P G + AV+ Y N+ A + + + A L C+A+ +E L EPL + + V + KAE AA++ VA + + TR LGV +FG +QL+++ T +T R A + G K P P RSD+ + DL L L Q + KH LTE DKIVL+ G Y+QGVYA+AS YG L ARLL QPLEE ARL+FS+ GA A + + + G +T Q +++ GGG L + + + LL+ VL+ GL+F +YT LLR+L + GS+ SE + LS +CVY FLA NG EAF VAR GR + +G V F ++ L G GLV AN M R S + R +F +A + + GG++ R ++ ++A PHPVVL +++ AV +S A G VAA H+LVG+L L LT + FE
Sbjct: 43 GKANIVLELLLGTALFVGREGFRLGLTKNIAGVANGSSGEEEKEDANGASPGDGGVPTKRKFQQHESYLDENKKENRQRDEQQMQQQRIINVSWLSVPTGAVMSILAVLMHLYSCSSNNNTSNANASEMMDYKLAGILYCIASFIESLSEPLVIRCLQEMDVTTKAKAEGAALVCKAVACFGMLHLTSSVWFWEAMKTIATRLELGVGGSGGQVCFAVTAFGVSQLVYAITF---------------TTIMFRKARATKD--------------GIRWPKRIHPFVSNPYRSDDTTAHQTQSGTTPLTQNFDLHTLHLILIFTLQGLFKHALTEADKIVLSTLAGS-------------------------------YDQGVYALASSYGGLAARLLLQPLEENARLLFSRQGAL--LAQQLQDATTTNGSREKDTQQYEKKQTIGGGPNNLLSD-LESTYCFLLRAVLYIGLIFATIATNYTSLLLRILAGDRWGSN--------SEASAALSAFCVYTAFLALNGTTEAFVYGVARSGRDVGKLGVAHAVVGGIFALISPGLVRSKGAVGLVTANCVCMGLRSAYSLYYARTYFAKA---EEALSGGKND----------------RISMISQIA----PHPVVLALFSMAYAVTKSSRDVLYDGALADGAVWTVAALTHVLVGILSLALTMTVSLYFE 649
BLAST of mRNA_F-serratus_M_contig882.20198.1 vs. uniprot
Match: A0A8H7Q6A4_MORIS (Oligosaccharide translocation protein RFT1 n=1 Tax=Mortierella isabellina TaxID=91625 RepID=A0A8H7Q6A4_MORIS) HSP 1 Score: 167 bits (422), Expect = 7.590e-40 Identity = 180/613 (29.36%), Postives = 261/613 (42.58%), Query Frame = 1
Query: 292 VVGAAVRGGSLLMLLALVQRASTFILNVILQRAMLSGADSSSTGQTNRTTSALEAYGAAAITLELISSTALFLSREPFRVALARSRVPLDASTSSGGTADGASRRKDEDSRK----------EADRQRFVNTAWLSAPVGVAFAAVVRLAYPWIIRNDAFQAVPENRQAATLVCLAAALELLCEPLALIFQHRLLVDVRVKAEAAAVLVLGVARYLLVTRA-------RLGVLSFGYAQLLHSATLAAAYVTFATRDIARESTKPVRNATVNEPLEKPAEAEELLPERGFTRVKGWLPQRPRPSRSDERNGVAVSAWVDLGQLWLASTLAGQSILKHVLTEGDKIVLARATGLGRACDDDXXXXXXXXXXXXXXXXXCGHGGSLYEQGVYAIASGYGSLVARLLFQPLEEAARLMFSKLGAEEGTASEFEASRVPAGQEAVETMQNRESGGGGDGRRLREKMAALLATLLKLVLFAGLMFVCFGFHYTETLLRLLLAKKGGSDGGDGSFAVSEVARVLSWYCVYVLFLAANGMCEAFACAVARGRQLTGMGAGLVVSFAAFWVLVGPLTERF---GTRGLVIANAAGMACRVVVSATFIRRFFLQASPKDPGI 2070
V+ ++V G S L+LL R TF L+ I+ R + E G A++ LEL+ ST LFLSRE FR AL R GG + +K+ SR E + Q+ N A+L +G+ + Y I + P R + + L+A ELL EPL ++ + L +RV E AVL+ + L R GVL+F AQL L YV F VRN ++ P + +L R + W D L L+ TL QS+LKHVLTEGDK++++ A D +QGVYA+ YGSL+AR+LF PLEE +R +FSKL ++ G + + A+ET A +L T+ KL + GL+F+CF +YT TL+ LL+ G + VL++YCVYV + NG+ EAF AVA +QL + +++ F+ +V G L F G GLV+AN ++ R++ S FIR++F S + P +
Sbjct: 19 VLSSSVAGASYLILLQFASRMLTFALHQIVMRYTTA-----------------ETLGIASVKLELLLSTILFLSREGFRCALLR-----------GGGSTATQPKKESSSRNQGNMVDVNSPEGEIQKVTNLAYLPTAIGLVTTLTACIYYLSTIDDVTASKYPFYRTSIVIYGLSAYCELLIEPLYILALNNLYFKLRVSVEGVAVLLRCFLTFGLTVLGANGSETNRYGVLAFAIAQLAFVLALVTGYVGFFANK--------VRNGEIDGRCIIPRKLVDLKSGRTY--------------------------WFDKTLLDLSLTLTKQSVLKHVLTEGDKMLVS-------ALSSDR------------------------DQGVYALVVNYGSLIARILFGPLEETSRTLFSKLLSDVG-----DKELTKSQSHALETS------------------ARILNTIFKLQILLGLIFICFATNYTATLIDLLV--------GSAWSQQTNAPTVLAFYCVYVPVMGINGISEAFVQAVASEQQLARLSKFMLL-FSFVFVCSGVLFMHFMQLGAIGLVLANIVNLSSRIIYSWVFIRQYFT--SKRGPAV 504
BLAST of mRNA_F-serratus_M_contig882.20198.1 vs. uniprot
Match: A0A197K7N8_9FUNG (Oligosaccharide translocation protein RFT1 n=1 Tax=Linnemannia elongata AG-77 TaxID=1314771 RepID=A0A197K7N8_9FUNG) HSP 1 Score: 167 bits (422), Expect = 3.630e-39 Identity = 203/736 (27.58%), Postives = 325/736 (44.16%), Query Frame = 1
Query: 283 ADAVVGAAVRGGSLLMLLALVQRASTFILNVILQRAMLSGADSSSTGQTNRTTSALEAYGAAAITLELISSTALFLSREPFRVALARSRVPLDASTSSGGTADGASRRKDE---DSRKEADR-QRFVNTAWLSAPVGVAFAAVVRLAYPWIIRNDAFQAV-PENRQAATLVCLAAALELLCEPLALIFQHRLLVDVRVKAEAAAVLVLGVARYLLVTRAR------------------LGVLSFGYAQLLHSA-TLAAAYVTFATRDIARESTKPVRNATVNEPLEKPAEAEELLPERGFTRVKGWLPQRPRPSRSDERNGVAVSAWVDLGQLWLASTLAGQSILKHVLTEGDKIVLARATGLGRACDDDXXXXXXXXXXXXXXXXXCGHGGSLYEQGVYAIASGYGSLVARLLFQPLEEAARLMFSKLGAEEGTASEFEASRVPAGQEAVETMQNRESGGGGDGRRLREKMAA-------LLATLLKLVLFAGLMFVCFGFHYTETLLRLLLAKKGGSDGGDGSFAVSEVARVLSWYCVYVLFLAANGMCEAFACAVARGRQLTGMGAGLVVSFAAFWVLVGPL---TERFGTRGLVIANAAGMACRVVVSATFIRRFFLQASPKDPGIDGGRSSTDAPP--ISRDINISTPRRKNLWREVAAGALPHPVVLCAMAVSSAVAHASSPAATGPWSIVAAFKHILVGVLCLGLTSALFARFEQKFLRDMRSLWAARR 2382
A +++ ++V+G S L+LL V R TF LN +L R TSA E G A++ LEL+ +T LFLSRE R A R V D++ GT ++ ++ EA R Q+ VN + PVG A + + Y + DA + + P R + L ++A +ELL EP+ ++ Q++L RV E AV+V V L +GVL+F AQ ++ TL + F ++ R R A + + A ++ + + LP+R D G + S + D L L+ TL QS+LKH+LTEGDK+++ + + QGVYA YGSL+AR+LFQP+EE +R +FS+L S+ P+G + + + + R L E LL T++K + GL+F+ FG HYT TL+ L++ + + V++ +VLS YC YV + NG+ EA AVA ++L G+ + ++ F+A + G T G+V+AN + R+V S F+ ++ + P G+SST A ++R + W+ + +P P VL A + V A++ G + H+ +GV + + E++FLRD++S+ RR
Sbjct: 43 ASSILSSSVQGASYLVLLQFVSRMLTFTLNQVLLRF----------------TSA-ETLGIASVQLELLLNTILFLSREGVRCAAIR--VSDDSTEGEEGTTSSDNKGMEKMRLTPGSEAYRLQKLVNMVYAPIPVG-ALMTCLAVGYYLLQVTDASEGLFPGYRLSIYLYGISALVELLAEPMFMVAQYKLWFKTRVSVEGTAVIVRCVLTCALTVYGSRTAVTGSSSEGSNTNTNTMGVLAFAIAQFVYGLLTLGGFLLAFWSKSTERRDLDRKRMAAAIKKRDGIAVEDQPNSDDDTVSMSALLPRRLTRVGKD---GQSESFYFDKELLKLSKTLTSQSLLKHILTEGDKMMMTKFA-------------------------------DVTAQGVYAFVVNYGSLIARILFQPMEETSRTLFSRL------LSDIAPGSTPSGNKDTNSEKTSNTTT-PTSRTLTETQLDNLVLSRNLLLTIMKFHILLGLVFIAFGTHYTATLIDLVVGRYWST--------VTKAPQVLSLYCYYVPIMGLNGITEAVVQAVASEKEL-GVLSYWMIGFSAVFCSTGAFLMGTLNLKAEGIVLANCVNLIMRIVWSMWFLSGYYGRYIPI-----AGKSSTTAKEGVLARFAYVP-------WQNI----IPRPTVLVAFGAAF-VLTATTEQWIGWEGLYNKAVHLGIGVAAFVVVMGVIFVTEKQFLRDIQSIVRQRR 691
BLAST of mRNA_F-serratus_M_contig882.20198.1 vs. uniprot
Match: A0A7S1VWD3_9STRA (Protein RFT1 homolog (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S1VWD3_9STRA) HSP 1 Score: 161 bits (407), Expect = 8.640e-38 Identity = 188/650 (28.92%), Postives = 274/650 (42.15%), Query Frame = 1
Query: 454 AYGAAAITLELISSTALFLSREPFRVALARSRVPLDASTSSGGTADGASRRKDEDSRKEADRQRFVNTAWLSAPVGVAFAAVVRLAY-PWIIRNDAFQAVPEN-----------RQAATLVCLAAALELLCEPLALIFQHRLLVDVRVKAEAAAVLVLGVARY--LLVTRARLGVLSFGYAQLLHSATLAAAYVTFATRDIARESTKPVRNATVNEPLEKPAEAEELLPERGFTRVKGWLPQRPRPSRSDERNGVAVSAWVDLGQLWLASTLAGQSILKHVLTEGDKIVLARATGLGRACDDDXXXXXXXXXXXXXXXXXCGHGGSLYEQGVYAIASGYGSLVARLLFQPLEEAARLMFSKLGA--EEGTASEFEASRVPAGQEAVETMQNRESGGGGDGRRLREKMAALLATLLKLVLFAGLMFVCFGFHYTETLLRLLLAKKGGSDGGDGSFAVSEVARVLSWYCVYVLFLAANGMCEAFACAVARGRQLTGMGAGLVVSFAAFWVLVGP-LTERFGTRGLVIANAAGMACRVVVSATFIRRFFLQASPKDPGIDGGRSSTDAPPISRDINISTPRRKNLWREVAAGALPHPVVLCAMAVSSAVAHAS-----SPAATGPWSIVAAFKHILVGVLCLGLTSALFARFE 2337
A G A++ LEL+ TALF+SRE FR+AL + SG +D ++ D R+ QR +N +WLS P+G + + + N A ++ E + A L C A+ +E L EPL + ++ V + KAE A+++ V+ + L + + V +FG +QL++ T + T R ++ ++ P RV P S+S R S D QL L Q + KH LTE DKIVL+ G Y+QG+YAIAS YG L ARLL QP+EE ARL+FS+ GA E+ S+ +++ A + + MQN S LL+ V GL+F +YT LLRLL + GS+ S+ LS +CVY FL+ NG+ EAF VAR + G + + + L+ P L +F GLV AN MA R S F +F +G R+S+ + R A+PHP+V+ A AVS A AS G ++A+ KH+ VG++C T A+ R E
Sbjct: 44 ALGKASVPLELLLGTALFVSREGFRLALTKE---------SGKKSDADAK----DGRRT--EQRMINVSWLSVPLGAIISMIAMYMHLSTCNHNIAIKSESEGVTKSEYELLDYKMAGVLYCFASFIESLSEPLVIRCLQQMDVTTKAKAEGVALVMKSVSCFGCLYILSSNWAVSAFGISQLVYGIT----FTTIMYR----------HGRSIEGGIQWPK------------RVTESTTINPYKSKSGIRQSFTQS--FDYQQLHLVLVFTLQGLFKHALTEADKIVLSALAGS-------------------------------YDQGIYAIASSYGGLAARLLLQPIEENARLLFSRQGALMEQDKESDSKSTTNAATSKQLVEMQNTYS------------------FLLRTVCLIGLLFATIATNYTSILLRLLAGYRWGSN--------SKAISALSAFCVYTAFLSLNGITEAFVYGVARSGKDIGQLSIVHAVVGVIFALIAPGLVAKF-QHGLVAANCICMALRSAYSLYFAWGYFA---------NGKRNSSSIRLMFR-------------------AVPHPLVVIAFAVSFAATRASRDHFYDETLEGQTWMLASLKHVGVGIVCACGTFAVTLRKE 564
BLAST of mRNA_F-serratus_M_contig882.20198.1 vs. uniprot
Match: A0A433PD29_9FUNG (Oligosaccharide translocation protein RFT1 n=1 Tax=Endogone sp. FLAS-F59071 TaxID=2340872 RepID=A0A433PD29_9FUNG) HSP 1 Score: 160 bits (405), Expect = 1.910e-37 Identity = 199/693 (28.72%), Postives = 295/693 (42.57%), Query Frame = 1
Query: 292 VVGAAVRGGSLLMLLALVQRASTFILNVILQRAMLSGADSSSTGQTNRTTSALEAYGAAAITLELISSTALFLSREPFRVALARS--RVPLDASTSSGGTADGA---SRRKDEDSRKEADRQRFVNTAWLSAPVGVAFAAVVRLAYPWIIRNDAFQAVPENRQAATLVCLAAALELLCEPLALIFQHRLLVDVRVKAEAAAVLV----------LGVARYLLVTRARLGVLSFGYAQLLHSATLAAAYVTFATRDIARESTKPVRNATVNEPLEKPAEAEELLPERGFTRVKGWLPQRPRPSRSDERNGVAVSAWVDLGQLWLASTLAGQSILKHVLTEGDKIVLARATGLGRACDDDXXXXXXXXXXXXXXXXXCGHGGSLYEQGVYAIASGYGSLVARLLFQPLEEAARLMFSKLGAEEGTASE----FEASRVPAGQEAVETMQNRESGGGGDGRRLREKMAALLATLLKLVLFAGLMFVCFGFHYTETLLRLLLAKKGGSDGGDGSFAVSEVAR-VLSWYCVYVLFLAANGMCEAFACAVARGRQLTGMGAGLVVSFAAFWVLVGPL---TERFGTRGLVIANAAGMACRVVVSATFIRRFFLQASPKDPGIDGGRSSTDAPPISRDINISTPRRKNLWREVAAGALPHPVVLCAMAVSSAVAHASSPAATGPWSIVAAFKHILVGVLC 2301
V+ ++V G S L+LL L R TF L+ I+ R + E G A++ LEL+ S+ LFLSRE FR AL RS A+ + D S R + K+ Q+ VN A+L +G+A V Y + +A +A P R + L LAA ELL EPL ++ Q+ L +RV E VL+ LG AR + GV +F AQL+ T+ Y F ++G ++ +PQR + D+ + W D L LA+T+ QS+LKH+LTEGDK++++ + S +QGVYA YGSL+AR+LFQPLEE R +FSKL A+ S + +Q+ + A LL TLL+ + GL+F+ +YT TL+ LL+ K ++++E A VLS YC YV + NG+ EAF AVA L G + ++ F+ +V G L +G GLVIAN + R+ S +IR+++L D G T+ + + +++ +N W P +V+ A + V S G ++ A KHI VG +C
Sbjct: 28 VLSSSVAGASYLVLLQLGSRLLTFALHQIVLRFTTA-----------------ETLGVASVKLELLLSSILFLSREGFRCALLRSGGESTFTATDGNASALDATLLPSTRGVLVTSKQGQTQKIVNLAYLPTVIGLATTFVACAYYLSTVDAEAARAYPYYRTSIILFGLAAYFELLSEPLFILAQNNLYFKLRVSVEGTGVLLRCFVTFGLTMLGAARPNKDGQNSYGVFAFALAQLVFGLTMVLGYAGFFG----------------------------WKAKKGKIDLRNLVPQRLMEVKQDK----VRTFWFDPYLLNLATTMTKQSLLKHLLTEGDKMLVSALS-------------------------------SARDQGVYAFVVNYGSLIARILFQPLEETGRTLFSKLLADINNPSSSPXXXXXXXXXXXXHPITAVQH----------KTLLTSATLLLTLLQFHILLGLLFIGLATNYTGTLIDLLVGPK---------WSIAEPAPLVLSVYCGYVPVMGLNGITEAFVQAVASEHDL-GRLSRAMIGFSLGFVAAGYLFMSVLEWGAVGLVIANNINLGLRIGYSWWYIRKYYLT--------DRGHDLTE---MRKIVSV-----RNWW--------PSGIVMAVFAAAWGVTWWSEKI-IGWATLGAKAKHIGVGAVC 595
BLAST of mRNA_F-serratus_M_contig882.20198.1 vs. uniprot
Match: A0A1Y1YEZ6_9FUNG (Oligosaccharide translocation protein RFT1 n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1YEZ6_9FUNG) HSP 1 Score: 157 bits (398), Expect = 7.240e-37 Identity = 189/659 (28.68%), Postives = 281/659 (42.64%), Query Frame = 1
Query: 460 GAAAITLELISSTALFLSREPFRVALARSRVPLDASTSSGGTADGASRRKDEDSRKEADRQRFVNTAWLSAPVG--VAFAAVVRLAYPWIIRNDAFQA-VPENRQAATLVCLAAALELLCEPLALIFQHRLLVDVRVKAEAAAVLVLGVARYLL------VTRAR--------LGVLSFGYAQLLHSATLAAAYVT-FATRDIARESTKPVRNATVNEPLEKPAEAEELLPERGFTRVKGWLPQRPRPSRSDERNGVAVSAWVDLGQLWLASTLAGQSILKHVLTEGDKIVLARATGLGRACDDDXXXXXXXXXXXXXXXXXCGHGGSLYEQGVYAIASGYGSLVARLLFQPLEEAARLMFSKL-GAEEGTASEFEASRVPAGQEAVETMQNRESGGGGDGRRLREKMAALLATLLKLVLFAGLMFVCFGFHYTETLLRLLLAKKGGSDGGDGSFAVSEVARVLSWYCVYVLFLAANGMCEAFACAVARGRQLTGMGAGLVVSFAAFWVLVGPLTERF---GTRGLVIANAAGMACRVVVSATFIRRFFLQASPKDPGIDGGRSSTDAPPISRDINISTPRRKNLWREVAAG-ALPHPVVLCAMAVSSAVAHASSPAATGPWSIVAAFKHILVGVLCLGLTSALFARFEQKFLRDMRSL 2367
G A + LEL+ +T LFL+RE R AL R+ D S S G + K DS+K Q +N A+L P+G VAF + Y ++ D P L L++ +ELL EPL +I Q++LL +RV E +AV+ V L +T + G+LSF AQL +S L YV F + STK +++ L +P TR P S + D Q L TL QS+LKHVLTEGDK++ + + Y+QG+YA YGSLV R+LFQP+EE ARL FS+L E S F S + A +LAT++K + G F+ FG +YT L+ +L +++ + RVL++YC+YV + NG+ E+F AVA +++ ++ F+ ++ G + +F G GLV+AN +A R+ + FI RF+ + P+ + + ++ G LP P V A S AV + S G +++ +HI VGVLCLG+ + + E +FL+ M SL
Sbjct: 20 GIAYVQLELLIATILFLTREGVRCALLRN----DESEESVGEKE-----KLNDSQKN---QLVLNLAYLPLPLGTLVAFLSY----YYYLYTADPISLNFPYYGLCVALYGLSSVIELLFEPLYIIAQNKLLFKLRVSLEGSAVITRCVITLSLTILGAYITSRQGAQQGENVFGILSFAIAQLCYSTILLVGYVKYFLAHPFSPSSTKGSITDRLSQFLPRP-----------ITRTVHDHP---------------TSQYFDPDQAKLGLTLTKQSLLKHVLTEGDKMLTSWLS-------------------------------IPYDQGIYAFVFNYGSLVPRILFQPVEETARLFFSRLLNGSEPANSGFSPSVLSA---------------------------RILATMIKFHIILGGFFIAFGSNYTHILIDML---------AGATWSSTPAPRVLAFYCIYVPIMGVNGIVESFVQAVANPSEISRHNKAMI-GFSVGFITAGVVFMKFLAAGAVGLVLANCFNLAMRIAWAWDFIHRFYKEYHPQ-------------------------KHSEIQSMLSFGNTLPSPYVCAAFVGSWAVTNISKTR-IGWTTMLDKVQHISVGVLCLGVVVVVIYQKEYQFLQSMNSL 542 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig882.20198.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig882.20198.1 >prot_F-serratus_M_contig882.20198.1 ID=prot_F-serratus_M_contig882.20198.1|Name=mRNA_F-serratus_M_contig882.20198.1|organism=Fucus serratus male|type=polypeptide|length=774bp MELRRRKGGDGCATAGEGQEETEDKGAGTSDAGTSAACSAAHKNSSSVSQback to top mRNA from alignment at F-serratus_M_contig882:138243..146847- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig882.20198.1 ID=mRNA_F-serratus_M_contig882.20198.1|Name=mRNA_F-serratus_M_contig882.20198.1|organism=Fucus serratus male|type=mRNA|length=8605bp|location=Sequence derived from alignment at F-serratus_M_contig882:138243..146847- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig882:138243..146847- >mRNA_F-serratus_M_contig882.20198.1 ID=mRNA_F-serratus_M_contig882.20198.1|Name=mRNA_F-serratus_M_contig882.20198.1|organism=Fucus serratus male|type=CDS|length=4644bp|location=Sequence derived from alignment at F-serratus_M_contig882:138243..146847- (Fucus serratus male)back to top |