mRNA_F-serratus_M_contig882.20195.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig882.20195.1
Unique NamemRNA_F-serratus_M_contig882.20195.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig882.20195.1 vs. uniprot
Match: D7G2Q7_ECTSI (Heat shock protein 40 like protein/ DnaJ domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2Q7_ECTSI)

HSP 1 Score: 596 bits (1537), Expect = 4.120e-207
Identity = 298/354 (84.18%), Postives = 326/354 (92.09%), Query Frame = 1
Query:    1 MSESSESAGALGTLFFYVLFVHPVCSWILAPKRFRKDRAIVYAILFLATIAFGKMALEMAERGANYYQLLGLRRGCSAIEIKRAYRQLSLELHPDKNPSQDAAERFSKMTAALEILMDSERREIYDKLGPEKAASKQPVNENTMLVEMAVWYLTWGVLAYVMTLGKSNRQARDWVFTGQIVMLAAEVAIVTTPGVGGVLPSWLLPGMAEHEVVWILHSIFPAFMNGCRSLGSHLYVDVEQQTRDMLLALRAGHQDVLVVLRDIQGSINSLASNGG-ARLQNSSTSGSTGSRVLPARASAVGKLRELEDKLSRNSTGVDAVAAQIKDSGKSSGNMQWLLVAVWVLFYFFLNNSGS 1059
            MS+++ESAGALGTLFFYV+FVHPVC+WILAPKRF KDRAIVYAI FLATIA GKMALE AERG N+YQLLG+RRG SAIEIKRAYRQLSLELHPDKNPSQDAA+ FSK+ AA EILMDSE+REIYDKLGPE A SK P NENTML+EMA+WY+TWGVLAYVMTLGK+NRQARDWVFTGQIVMLA EVAIVTTPG  GVLPSWL P MAE+EVVWILHSIFPA+MNGCRSLGSHL+VDV+QQTRDMLLALRAGHQDVLVVLRDIQGSINSL S+GG ARL NSS+ GS G R +PA+ASAVGKLRELE+KL+RN TGVDAVAA+IKDSGKSSGNMQWLLV +WV+FYFF+NN GS
Sbjct:    1 MSDTAESAGALGTLFFYVMFVHPVCAWILAPKRFPKDRAIVYAIAFLATIAIGKMALENAERGPNFYQLLGVRRGSSAIEIKRAYRQLSLELHPDKNPSQDAADMFSKIQAAQEILMDSEKREIYDKLGPEAATSKHPFNENTMLIEMAIWYITWGVLAYVMTLGKANRQARDWVFTGQIVMLAVEVAIVTTPGGDGVLPSWLFPHMAEYEVVWILHSIFPAYMNGCRSLGSHLFVDVDQQTRDMLLALRAGHQDVLVVLRDIQGSINSLGSSGGGARLTNSSSGGSAGPRAIPAKASAVGKLRELEEKLTRNGTGVDAVAAEIKDSGKSSGNMQWLLVGIWVVFYFFVNNGGS 354          
BLAST of mRNA_F-serratus_M_contig882.20195.1 vs. uniprot
Match: A0A6H5K8B0_9PHAE (HSP40 like protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8B0_9PHAE)

HSP 1 Score: 435 bits (1118), Expect = 1.410e-144
Identity = 217/280 (77.50%), Postives = 238/280 (85.00%), Query Frame = 1
Query:    1 MSESSESAGALGTLFFYVLFVHPVCSWILAPKRFRKDRAIVYAILFLATIAFGKM-----------------------ALEMAERGANYYQLLGLRRGCSAIEIKRAYRQLSLELHPDKNPSQDAAERFSKMTAALEILMDSERREIYDKLGPEKAASKQPVNENTMLVEMAVWYLTWGVLAYVMTLGKSNRQARDWVFTGQIVMLAAEVAIVTTPGVGGVLPSWLLPGMAEHEVVWILHSIFPAFMNGCRSLGSHLYVDVEQQTRDMLLALRAGHQDVL 771
            MS+++ESAGALGTLFFYV+FVHPVC+WILAPKRF KDRAIVYAI FLATIA GKM                       ALE AERG N+YQLLG+RRG SAIEIKRAYRQLSLELHPDKNPSQDAA+ FSK+ AA E+LMDSE+REIYDKLGPE A SK P NENTML+EMA+WY+TWGVLAYVMTLGK+NRQARDWVFTGQIVMLA EVAIVTTPG  GVLPSWL P MAE+EVVWILHSIFPA+MNGCRSLG+HL+VDV+QQTRDMLLALRAGHQ V+
Sbjct:    1 MSDTAESAGALGTLFFYVMFVHPVCAWILAPKRFPKDRAIVYAIAFLATIAIGKMVRDGQRSQTNKKTIGWYRPVAKMALENAERGPNFYQLLGVRRGSSAIEIKRAYRQLSLELHPDKNPSQDAADMFSKIQAAQEVLMDSEKREIYDKLGPEAATSKHPFNENTMLIEMAIWYITWGVLAYVMTLGKANRQARDWVFTGQIVMLAVEVAIVTTPGGDGVLPSWLFPHMAEYEVVWILHSIFPAYMNGCRSLGNHLFVDVDQQTRDMLLALRAGHQPVV 280          
BLAST of mRNA_F-serratus_M_contig882.20195.1 vs. uniprot
Match: A0A7S2V6D8_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V6D8_9STRA)

HSP 1 Score: 317 bits (813), Expect = 1.450e-98
Identity = 155/344 (45.06%), Postives = 239/344 (69.48%), Query Frame = 1
Query:   25 GALGTLFFYVLFVHPVCSWILAPKRFRKDRAIVYAILFLATIAFGKMALEMAERGANYYQLLGLRRGCSAIEIKRAYRQLSLELHPDKNPSQDAAERFSKMTAALEILMDSERREIYDKLGPEKAASKQPVNENTMLVEMAVWYLTWGVLAYVMTLGKSNRQARDWVFTGQIVMLAAEVAIVTTPGVGGVLPSWLLPGMAEHEVVWILHSIFPAFMNGCRSLGSHLYVDVEQQTRDMLLALRAGHQDVLVVLRDIQGSINS----LASNGGARLQNSSTSGSTGSRVLPARASAVGKLRELEDKLSRNSTGV--DAVAAQIKDSGKSSGNMQWLLVAVWVLFYF 1038
            G LG  FFYV+FV+PV +WIL P RF+K + I+YAI FL  IA  K+ +++ +RG NYYQ+LG+ R  + +EIKRAY+++++ELHPDKNPS +A E F+++ +A ++LMD E RE+Y+K G +   S +  +E  ML+E+A++Y+TWG+LAYV+TLGKS+  AR W+FTG+IVML AEV  +   G    +P+W LP + EHE++ +LH++FP FMNGCR +GS LYVD++QQTR++L  L   +  +L+VLRDIQ ++        S GG ++         G      +A+  GKL+ELE+++  N+ G+   AVA ++++SGK+  +  W ++ ++++FY+
Sbjct:    5 GGLGDFFFYVMFVYPVTNWILKPGRFQKKKGIMYAIAFLVVIASIKIGVDVMDRGPNYYQVLGVNRASNPLEIKRAYKKMAVELHPDKNPSPNAEEEFNRLKSAYDVLMDMELREVYNKFGEDGIKSNKRFDEYQMLLEIAIFYVTWGMLAYVLTLGKSSVTARTWIFTGEIVMLVAEVTFMLNQGE---MPTWFLPFVTEHELILLLHALFPPFMNGCRCIGSALYVDIDQQTRNLLQELHNQNNTILLVLRDIQVNLQQGVAVAGSGGGGKV--------VGGASSAIKATPTGKLKELEERMKANALGLKTSAVAKELENSGKTGVSSFWWMLGLYIVFYY 337          
BLAST of mRNA_F-serratus_M_contig882.20195.1 vs. uniprot
Match: A0A7S0GF48_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GF48_9STRA)

HSP 1 Score: 311 bits (798), Expect = 3.560e-96
Identity = 157/352 (44.60%), Postives = 238/352 (67.61%), Query Frame = 1
Query:   13 SESAGALGTLFFYVLFVHPVCSWILAPKRFRKDRAIVYAILFLATIAFGKMALEMAERGANYYQLLGLRRGCSAIEIKRAYRQLSLELHPDKNPSQDAAERFSKMTAALEILMDSERREIYDKLGPEKAASKQPVNENTMLVEMAVWYLTWGVLAYVMTLGKSNRQARDWVFTGQIVMLAAEVAIVTTPGVGGVLPSWLLPGMAEHEVVWILHSIFPAFMNGCRSLGSHLYVDVEQQTRDMLLALRAGHQDVLVVLRDIQGSINSLASNG---GARLQNS----STSGSTGSRVLPARASAVGKLRELEDKLSRNSTGVDAVA--AQIKDSGKSSGNMQWLLVAVWVLFYFF 1041
            ++  GA+G+ FFYV  VHP  +WIL P RF + ++I+YAI FLA +A  K  +EM E+G N+Y LL + R  S ++IKRAY++LSL LHPDKN + DA E+F  +  + ++L+D E RE+Y+K G     S +  +E+T  +E+ V+Y+TWG++ Y++TLGK + +AR W FTG I+ML  E+AI+T+      LP WL P   E+E++W+LH++FPAFMNGCRS+GS+LYVD++++ R +L AL+  +QD+L+VLRD+Q  I +L ++G   G RL NS    ST+G + +  + ARA+  GK++EL+++L  N   +   A  AQ K++G SS     ++VA   + Y F
Sbjct:    2 ADDLGAIGSFFFYVFIVHPATAWILRPGRFERSKSIMYAIAFLAALAAVKTGIEMNEKGPNHYSLLNVDRASSPLDIKRAYKKLSLVLHPDKNDAPDAEEQFDNLKKSYDVLIDMEYREVYNKFGAAGIESNKRFDESTFFMELGVFYVTWGIMVYMLTLGKKSGEARQWTFTGLILMLVIEIAIMTSTE--NPLPEWLFPTTTEYEMIWLLHTLFPAFMNGCRSMGSYLYVDLDEKQRALLKALQEQNQDILLVLRDVQIGIQNLQTSGVSSGPRLGNSTLTPSTAGLSAASDVTARATPTGKIKELQNRLQPNKPNIAPTANQAQAKNTGSSSLGFYGMIVAYVAISYMF 351          
BLAST of mRNA_F-serratus_M_contig882.20195.1 vs. uniprot
Match: A0A6U0IH11_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A6U0IH11_9STRA)

HSP 1 Score: 310 bits (795), Expect = 1.240e-95
Identity = 161/357 (45.10%), Postives = 234/357 (65.55%), Query Frame = 1
Query:    4 SESSESAGALGTLFFYVLFVHPVCSWILAPKRFRKDRAIVYAILFLATIAFGKMALEMAERGANYYQLLGLRRGCSAIEIKRAYRQLSLELHPDKNPSQDAAERFSKMTAALEILMDSERREIYDKLGPEKAASKQPVNENTMLVEMAVWYLTWGVLAYVMTLGKSNRQARDWVFTGQIVMLAAEVAIVTTPGVGGVLPSWLLPGMAEHEVVWILHSIFPAFMNGCRSLGSHLYVDVEQQTRDMLLALRAGHQDVLVVLRDIQGSINSLASNG--------GARLQNSSTSGSTGSRVLPARASAVGKLRELEDKLSRNSTGVDAVAAQIKDSGKSSGNMQ-WLLVAVWVLFYFFLN 1047
            +E+S+    +G   F+V  VHP  +WIL P RF + ++I+YAI FLA +A  K  +E   +G NYY  LG+ R  + +EIKRAY++LSL+LHPDKNPS +A+++F  +  A +ILMD E R +Y+K G    AS +  +E    VE+AV+YLTWG++ +V+TLGK +  AR WVFTG IVML  E++I+T+      LPSWL P   E+E VW++HS+FPAFMNGCRSLG+ LYVD+E QTR +LLAL+  ++DVL+VLRD+Q  + S+ +NG        G R   S  SG+  + +L  RA+  GK+RE++++L  ++  V    +++   GKSS +   +  +  +VLF F  N
Sbjct:    6 AEASDDLSGIGGFLFFVFIVHPATAWILRPGRFERRKSIMYAIAFLAGLAAIKTGIEYNSKGPNYYVRLGVSRDSNPLEIKRAYKKLSLQLHPDKNPSPNASDQFDSVKQAYDILMDLELRGVYNKFGSPGIASNKRFDETQFFVELAVFYLTWGMMVFVLTLGKKSGDARQWVFTGMIVMLVLEISIMTSQE--NPLPSWLFPQTTEYEAVWLMHSLFPAFMNGCRSLGAFLYVDLEAQTRHLLLALQEQNKDVLLVLRDVQIGVQSILANGSGGGNTSVGTRSSPSMASGNVSAPLL--RATPTGKIREIQERLQSSNAHVVKAVSELNADGKSSSSFGFYAFILAYVLFSFLFN 358          
BLAST of mRNA_F-serratus_M_contig882.20195.1 vs. uniprot
Match: A0A6U1ZV61_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A6U1ZV61_TRICV)

HSP 1 Score: 309 bits (792), Expect = 3.780e-95
Identity = 158/358 (44.13%), Postives = 233/358 (65.08%), Query Frame = 1
Query:   10 SSESAGALGTLFFYVLFVHPVCSWILAPKRFRKDRAIVYAILFLATIAFGKMALEMAERGANYYQLLGLRRGCSAIEIKRAYRQLSLELHPDKNPSQDAAERFSKMTAALEILMDSERREIYDKLGPEKAASKQPVNENTMLVEMAVWYLTWGVLAYVMTLGKSNRQARDWVFTGQIVMLAAEVAIVTTPGVGGVLPSWLLPGMAEHEVVWILHSIFPAFMNGCRSLGSHLYVDVEQQTRDMLLALRAGHQDVLVVLRDIQGSINSLASNGGARLQNSSTSGSTGSRV--LPA-------RASAVGKLRELEDKLSRNSTGVDAVAAQIKDSGKSSGNMQ-WLLVAVWVLF-YFFLNN 1050
            +++    L   FFYV  VHP  +WIL P RF K ++I+YAI FLA +A  K  LEM  RG N+YQLLG+ R  + +EIKRAY++LSL+LHPDKN + DA+ERF ++  + ++LMD E RE+Y+K GPE  AS +  +E    +E+ V+Y+TWG++ +V+TLGK +  AR W FTG IVML  E+AI+T       LP  L P   EHEVVW++HS+FPAFMNGCRSLG+ L++D++ Q R +LLAL+  ++D+L+VLRD+Q  + ++ ++GG        +GS  +    LPA       RA+  GK++EL+++L  ++T V      +K  G+ S +   + ++  ++ F Y F NN
Sbjct:    7 AADDLSGLSGFFFYVFIVHPATAWILRPGRFEKKKSIMYAIGFLAALASIKTGLEMQARGPNHYQLLGVTRASNPLEIKRAYKKLSLQLHPDKNTAPDASERFDEVKKSYDVLMDMELREVYNKFGPEGIASNKRFDETQFFIELGVFYITWGMMVFVLTLGKKSGDARQWCFTGMIVMLVCEIAIMTARN--NPLPKELFPTSTEHEVVWLMHSLFPAFMNGCRSLGAFLFIDLDAQARQLLLALQEQNKDILLVLRDVQIGVQTIQAHGGGXXXAGRLAGSGAATTAGLPAQGAAPITRATPTGKIKELQERLQNSNTSVVKAVDDLKSEGQKSSSFGFYAMIMGYIAFSYLFSNN 362          
BLAST of mRNA_F-serratus_M_contig882.20195.1 vs. uniprot
Match: A0A1E7FEZ0_9STRA (DnaJ-domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FEZ0_9STRA)

HSP 1 Score: 308 bits (790), Expect = 6.560e-95
Identity = 159/358 (44.41%), Postives = 234/358 (65.36%), Query Frame = 1
Query:   13 SESAGA-------LGTLFFYVLFVHPVCSWILAPKRFRKDRAIVYAILFLATIAFGKMALEMAERGANYYQLLGLRRGCSAIEIKRAYRQLSLELHPDKNPSQDAAERFSKMTAALEILMDSERREIYDKLGPEKAASKQPVNENTMLVEMAVWYLTWGVLAYVMTLGKSNRQARDWVFTGQIVMLAAEVAIVTTPGVGGVLPSWLLPGMAEHEVVWILHSIFPAFMNGCRSLGSHLYVDVEQQTRDMLLALRAGHQDVLVVLRDIQGSINSLASNG-------GARLQNSSTSGSTGSRVLPARASAVGKLRELEDKLSRNSTGVDAVAAQIKDSGKSSG-NMQWLLVAVWVLFYFF 1041
            SE AGA       LG  FFYV  VHP+ +WIL P RF + ++I+YAI FLA +A  K  LE+ ++G NYYQ+L + R  + +EIKRAY++L L+LHPDKNPS DAA+ F ++  A +ILMD E R++Y+K G E     +  +E   L+E+A++Y++W V+A+++T+GK + QARDWVFTG IVML  EV ++T+      +P+WLLP + E ++V I+HS+FPAFMNGCRSLGS L+VDV+ Q R  LLAL+  ++D+L+VLRD+Q  + ++ +NG       G  LQ++     T    +P +A+  GK+REL+D+L  ++  V      +K   KSS      +++   V+ Y F
Sbjct:    2 SEDAGAGSDDFSGLGGFFFYVFLVHPITAWILRPGRFERKKSIMYAIAFLAALAAVKTGLEIQQQGPNYYQILDVTRESNPLEIKRAYKKLGLKLHPDKNPSPDAADEFDRVKQAYDILMDLELRDVYNKFGKEGVRDNKRYSETQFLIEVAIFYVSWAVMAFLLTMGKKSGQARDWVFTGLIVMLVVEVVVMTSQD--NPIPTWLLPTVTERDIVRIMHSLFPAFMNGCRSLGSFLFVDVDAQLRQFLLALQEQNKDILLVLRDVQIGVQNIQANGISGGGFGGGPLQSTGNIPVTTEGGIPTKATPTGKIRELQDRLQYSNATVAQAVQSLKTENKSSNLGFYGMIIGYIVISYLF 357          
BLAST of mRNA_F-serratus_M_contig882.20195.1 vs. uniprot
Match: A0A1Z5JP57_FISSO (DnaJ homolog subfamily C member 10 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JP57_FISSO)

HSP 1 Score: 305 bits (780), Expect = 1.570e-93
Identity = 155/350 (44.29%), Postives = 241/350 (68.86%), Query Frame = 1
Query:    4 SESSESAGALGTLFFYVLFVHPVCSWILAPKRFRKDRAIVYAILFLATIAFGKMALEMAERGANYYQLLGLRRGCSAIEIKRAYRQLSLELHPDKNPSQDAAERFSKMTAALEILMDSERREIYDKLGPEKAASKQPVNENTMLVEMAVWYLTWGVLAYVMTLGKSNRQARDWVFTGQIVMLAAEVAIVTTPGVGGVLPSWLLPGMAEHEVVWILHSIFPAFMNGCRSLGSHLYVDVEQQTRDMLLALRAGHQDVLVVLRDIQGSINSLASNGGARLQNSSTSGSTGSRVLPARASAVGKLRELEDKLSRNSTGVDAVAAQIK-DSGKSSGNMQWLLVAVWVLFYFFLNN 1050
            S   + +G  G  FFY+  VHP+ +WIL P RF + ++I+YAILFLA +A  K  LE+ +RG NYYQ LG+ R  S +EIKRAY++LSL+LHPDKNPS DA  +F  +  A ++LMD E RE+Y+K G E     +  +E   L+E+AV+Y+++GV+A+++T+GK + +AR+W FTG + ML  EVA++++ G    LP +L P + E E+VW+LHS+FPAFMNGCRSLG++L+VD++ QTR +LLAL+  ++D+L+VLR++Q  + ++ ++G  R   +STSG+  +  +P RA+  GK+REL+++L  +++ V      +K D G SS    + L+  +++  +  NN
Sbjct:    9 SGGDDMSGLTG-FFFYMFIVHPITAWILRPGRFERKKSIMYAILFLAGLAAIKTGLEVQQRGPNYYQKLGITRSSSPLEIKRAYKKLSLQLHPDKNPSPDAPAQFDAVKQAYDVLMDMELREVYNKFGHEGIQQNKRYSETQFLLEIAVFYVSYGVMAFLLTMGKKSGEARNWTFTGLLAMLVLEVAVMSSQG--NPLPEYLFPTLTECEIVWLLHSLFPAFMNGCRSLGAYLFVDLDAQTRQLLLALQEQNKDILLVLREVQIGVQTIQTHGAGR---NSTSGAVVTTDMP-RATPTGKIRELQERLQASNSSVAQAVQNLKADKGSSSNLGFYGLILGYIVISYVFNN 351          
BLAST of mRNA_F-serratus_M_contig882.20195.1 vs. uniprot
Match: K0SIC3_THAOC (J domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SIC3_THAOC)

HSP 1 Score: 301 bits (772), Expect = 2.450e-92
Identity = 151/355 (42.54%), Postives = 228/355 (64.23%), Query Frame = 1
Query:    1 MSESS---ESAGALGTLFFYVLFVHPVCSWILAPKRFRKDRAIVYAILFLATIAFGKMALEMAERGANYYQLLGLRRGCSAIEIKRAYRQLSLELHPDKNPSQD-AAERFSKMTAALEILMDSERREIYDKLGPEKAASKQPVNENTMLVEMAVWYLTWGVLAYVMTLGKSNRQARDWVFTGQIVMLAAEVAIVTTPGVGGVLPSWLLPGMAEHEVVWILHSIFPAFMNGCRSLGSHLYVDVEQQTRDMLLALRAGHQDVLVVLRDIQGSINSLASNGGARLQNSSTSGSTGSRVLPARASAVGKLRELEDKLSRNSTGVDAVAAQIKDSGKSSGNMQWLLVAVWVLFYFFLNNS 1053
            MSES    +    L   FFYV  VHP  +WIL P RF + ++I YAI FLA +A  K  +EM  +G N+Y LLG+ R  S +++KRAY++LSL+LHPDKNP+   A+ +F ++  A ++L+D E RE+Y+K G     S +  +E    +E+ ++Y+TWG++AYV+TLGK +   R W FTG IVML  E+ I+T+ G     PSW +P   E+E++W+LH++FPAFMNGCRS+G  L+VD+E QTR +LLAL+  ++D+L+VLRD+Q  + ++ +NGG    N   +GS  S   P R +  GKL+EL+D+L  +++ V    +Q+K    +S    + ++  +V   +  NNS
Sbjct:    1 MSESDAGGDDLSGLSGFFFYVFIVHPATAWILKPGRFERKKSITYAIGFLALLAAVKTGMEMQAKGPNHYSLLGVNRNSSPLDVKRAYKKLSLQLHPDKNPNDPLASAKFDRVKKAYDVLIDMEYREVYNKFGQPGIDSNKRFDETQFFMELGIFYVTWGIMAYVLTLGKRSGLGRQWTFTGLIVMLVIEITIMTSQG--NPFPSWFMPQNTEYEIIWLLHTLFPAFMNGCRSIGGFLFVDLEAQTRQLLLALQEQNKDILLVLRDVQIGVQNIQANGGGGGANGRVAGSAPSGTQP-RMTPTGKLKELQDRLQSSNSTVQQAVSQLKTEKSNSNFGFYAMILGYVAISYIFNNS 352          
BLAST of mRNA_F-serratus_M_contig882.20195.1 vs. uniprot
Match: A0A7S3P2D2_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3P2D2_9STRA)

HSP 1 Score: 298 bits (762), Expect = 8.560e-91
Identity = 153/357 (42.86%), Postives = 235/357 (65.83%), Query Frame = 1
Query:   13 SESAGALGTLFFYVLFVHPVCSWILAPKRFRKDRAIVYAILFLATIAFGKMALEMAERGANYYQLLGLRRGCSAIEIKRAYRQLSLELHPDKNPSQDAAERFSKMTAALEILMDSERREIYDKLGPEKAASKQPVNENTMLVEMAVWYLTWGVLAYVMTLGKSNRQARDWVFTGQIVMLAAEVAIVTTPGVGGVLPSWLLPGMAEHEVVWILHSIFPAFMNGCRSLGSHLYVDVEQQTRDMLLALRAGHQDVLVVLRDIQGSINSLASNGGA---------RLQNSSTSGSTGSRVLPARASAVGKLRELEDKLSRNSTGVDAVAAQIKDSGKSS-GNMQWLLVAVWVLFYFFLNNS 1053
            SE    L   FFYV  VHP  +WIL P RF + R+I+YAI FLA +A  K  LE+  RG NYY LLG+ R  + +EIKRAY++LSL+LHPDKNPS  A++ F  +  A ++LMD E RE+Y+K G E   + +  +E   L+E A++Y+++G++A+++TLGK + +AR+W+FTG +VML  EV I+T+       P+WL P M EH+ VW++ ++FPAFMNGCRSLGS LYVD++ QTR +LLAL+  ++D+L+VLRD+Q  + ++ ++G +         R+  + T G      +P RA+  GKL+EL+D+L  ++T +    +Q+++ G +   NM + L+ +  +   ++ NS
Sbjct:    9 SEDFSGLSGFFFYVFIVHPATAWILRPGRFERKRSIMYAIAFLAGLAAIKTGLELQARGPNYYSLLGVNRSSNPLEIKRAYKKLSLQLHPDKNPSPTASDEFDAVKQAYDVLMDMEFREVYNKFGKEGIKNNKRYDETQFLLETAIFYVSYGMMAFMLTLGKKSGEARNWIFTGLLVMLVVEVVIMTSQT--NPFPAWLFPHMTEHDFVWLMKNLFPAFMNGCRSLGSFLYVDLDAQTRHLLLALQEQNKDILLVLRDVQIGVQTIQTHGVSGGXXXXGVPRVAGAPTGG-----PMP-RATPTGKLKELQDRLQSSNTNIAQAVSQLQNDGSAGKSNMGFYLMILGYIVVSYMFNS 357          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig882.20195.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G2Q7_ECTSI4.120e-20784.18Heat shock protein 40 like protein/ DnaJ domain co... [more]
A0A6H5K8B0_9PHAE1.410e-14477.50HSP40 like protein n=1 Tax=Ectocarpus sp. CCAP 131... [more]
A0A7S2V6D8_9STRA1.450e-9845.06Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S0GF48_9STRA3.560e-9644.60Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
A0A6U0IH11_9STRA1.240e-9545.10Hypothetical protein n=1 Tax=Minutocellus polymorp... [more]
A0A6U1ZV61_TRICV3.780e-9544.13Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A1E7FEZ0_9STRA6.560e-9544.41DnaJ-domain-containing protein n=1 Tax=Fragilariop... [more]
A0A1Z5JP57_FISSO1.570e-9344.29DnaJ homolog subfamily C member 10 n=2 Tax=Fistuli... [more]
K0SIC3_THAOC2.450e-9242.54J domain-containing protein n=1 Tax=Thalassiosira ... [more]
A0A7S3P2D2_9STRA8.560e-9142.86Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig882contigF-serratus_M_contig882:76006..85261 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score601.3
Seed ortholog evalue3e-169
Seed eggNOG ortholog2880.D7G2Q7
Hectar predicted targeting categorysignal anchor
EggNOG free text desc.heat shock protein binding
EggNOG OGsCOG0484@1,KOG0712@2759
Ec32 ortholog descriptionDnaJ domain protein
Ec32 orthologEc-11_003130.1
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons7
Model size2276
Cds size1062
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig882.20195.1prot_F-serratus_M_contig882.20195.1Fucus serratus malepolypeptideF-serratus_M_contig882 76006..84047 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932569.1997786-CDS-F-serratus_M_contig882:76005..761701622932569.1997786-CDS-F-serratus_M_contig882:76005..76170Fucus serratus maleCDSF-serratus_M_contig882 76006..76170 +
1690964370.2470262-CDS-F-serratus_M_contig882:76005..761701690964370.2470262-CDS-F-serratus_M_contig882:76005..76170Fucus serratus maleCDSF-serratus_M_contig882 76006..76170 +
1622932569.218815-CDS-F-serratus_M_contig882:80177..803541622932569.218815-CDS-F-serratus_M_contig882:80177..80354Fucus serratus maleCDSF-serratus_M_contig882 80178..80354 +
1690964370.2664187-CDS-F-serratus_M_contig882:80177..803541690964370.2664187-CDS-F-serratus_M_contig882:80177..80354Fucus serratus maleCDSF-serratus_M_contig882 80178..80354 +
1622932569.2334313-CDS-F-serratus_M_contig882:80702..808011622932569.2334313-CDS-F-serratus_M_contig882:80702..80801Fucus serratus maleCDSF-serratus_M_contig882 80703..80801 +
1690964370.2762072-CDS-F-serratus_M_contig882:80702..808011690964370.2762072-CDS-F-serratus_M_contig882:80702..80801Fucus serratus maleCDSF-serratus_M_contig882 80703..80801 +
1622932569.2494314-CDS-F-serratus_M_contig882:81901..820931622932569.2494314-CDS-F-serratus_M_contig882:81901..82093Fucus serratus maleCDSF-serratus_M_contig882 81902..82093 +
1690964370.2852302-CDS-F-serratus_M_contig882:81901..820931690964370.2852302-CDS-F-serratus_M_contig882:81901..82093Fucus serratus maleCDSF-serratus_M_contig882 81902..82093 +
1622932569.311449-CDS-F-serratus_M_contig882:82795..829241622932569.311449-CDS-F-serratus_M_contig882:82795..82924Fucus serratus maleCDSF-serratus_M_contig882 82796..82924 +
1690964370.294206-CDS-F-serratus_M_contig882:82795..829241690964370.294206-CDS-F-serratus_M_contig882:82795..82924Fucus serratus maleCDSF-serratus_M_contig882 82796..82924 +
1622932569.332676-CDS-F-serratus_M_contig882:83112..832581622932569.332676-CDS-F-serratus_M_contig882:83112..83258Fucus serratus maleCDSF-serratus_M_contig882 83113..83258 +
1690964370.3067906-CDS-F-serratus_M_contig882:83112..832581690964370.3067906-CDS-F-serratus_M_contig882:83112..83258Fucus serratus maleCDSF-serratus_M_contig882 83113..83258 +
1622932569.3504143-CDS-F-serratus_M_contig882:83893..840471622932569.3504143-CDS-F-serratus_M_contig882:83893..84047Fucus serratus maleCDSF-serratus_M_contig882 83894..84047 +
1690964370.315447-CDS-F-serratus_M_contig882:83893..840471690964370.315447-CDS-F-serratus_M_contig882:83893..84047Fucus serratus maleCDSF-serratus_M_contig882 83894..84047 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932569.4173179-UTR-F-serratus_M_contig882:84047..852611622932569.4173179-UTR-F-serratus_M_contig882:84047..85261Fucus serratus maleUTRF-serratus_M_contig882 84048..85261 +
1690964370.32575-UTR-F-serratus_M_contig882:84047..852611690964370.32575-UTR-F-serratus_M_contig882:84047..85261Fucus serratus maleUTRF-serratus_M_contig882 84048..85261 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig882.20195.1

>prot_F-serratus_M_contig882.20195.1 ID=prot_F-serratus_M_contig882.20195.1|Name=mRNA_F-serratus_M_contig882.20195.1|organism=Fucus serratus male|type=polypeptide|length=354bp
MSESSESAGALGTLFFYVLFVHPVCSWILAPKRFRKDRAIVYAILFLATI
AFGKMALEMAERGANYYQLLGLRRGCSAIEIKRAYRQLSLELHPDKNPSQ
DAAERFSKMTAALEILMDSERREIYDKLGPEKAASKQPVNENTMLVEMAV
WYLTWGVLAYVMTLGKSNRQARDWVFTGQIVMLAAEVAIVTTPGVGGVLP
SWLLPGMAEHEVVWILHSIFPAFMNGCRSLGSHLYVDVEQQTRDMLLALR
AGHQDVLVVLRDIQGSINSLASNGGARLQNSSTSGSTGSRVLPARASAVG
KLRELEDKLSRNSTGVDAVAAQIKDSGKSSGNMQWLLVAVWVLFYFFLNN
SGS*
back to top

mRNA from alignment at F-serratus_M_contig882:76006..85261+

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig882.20195.1 ID=mRNA_F-serratus_M_contig882.20195.1|Name=mRNA_F-serratus_M_contig882.20195.1|organism=Fucus serratus male|type=mRNA|length=9256bp|location=Sequence derived from alignment at F-serratus_M_contig882:76006..85261+ (Fucus serratus male)
ATGTCGGAGTCATCGGAATCAGCTGGAGCACTGGGTACACTCTTCTTCTA CGTTCTATTCGTTCACCCGGTGTGCTCTTGGATCCTCGCGCCCAAACGCT TTCGTAAGGACCGAGCGATTGTCTACGCCATCCTGTTCCTGGCCACCATA GCTTTTGGAAAGATGGTGAGCGACGGAGACGCGACGAGACACGTCCTACG TTCATGATCCGCGGAGGATAGACCTAAAGTGGAGGCGTCTACTTTCCCTG TATCGGTACAAGCTGAGAAGGGTGCTAGCTTCCCCCTGTGAACCGTGAAT ATTCCCCATGTGGTGAATGAGGGGGACACGTGTCCATTTGGCTGGATCAT GAACTGCAAGTTGTTGTCCAGCGGGGCCTTTGCTTACTTATTTGTTTACT TGACATCAGTACTACTCTTGTACAATGACTAAACAACATTCTGCAAGTGC TAATTATTATATGTAGAGGGTTTTGACTTCCAAAAGCATCTCTGATACGG CAGGACGTTTGGTACATTTTCCACCACGACCGCGAATTCAATTGTACTTC AAGTCGCCTGGTCGAATACAGAGGTGCTTCCGTGTGACCCCAAAGCACTT GGATCACCCAGGATTTTCTGAGCTGGGCTAGCTAAGATTGCACCACTCGT TACAGAAGTAGCTCGAATCCCTTACAATCATACAATCAACTGCCTAAGAT ACGGTCTGTCTGCAGCCCACATGTCACTGTACCATCAGTATATTATACTT TAAAATACTCGTAGTAAAGGAAAAGAGGGGCTCAGAAGAAACCTCGATGG GGTTTCTTGAATGGACATCACCCTGAATGGACATCACCCTGAATGGACAT CACCCGTTACTTGAGCTACCCTGAGGACTACCGGCATTATGCCTACGGAC TCTCCACGGTTGTTGTTGTTGTTGTTTGTCACATTCAGCGTATTGGTTGT GCCAGTCATAATAAACTACTTTACACACAACCGGTCGCCCCGGTAGCTCA GTAGGTACCACGTAACCTTCTGACACGTTGGGACGTGAGTTCGATCCCGG CAAACGGGATCGAACTCACTAAAAACTAAAAACCAAAATAAAAATGCCCA ACGGGTGAAGAACGATTTATTCATTAGTACACAAAAATTCGACTTCACGG TCGACGAGGGAAAGGAATGGCTGAATCCTTTTCGCGATAAAAATTGAGGC ACGCACCGCAGAAGGAAGGTGGATGAGAAATCCTGTGTGAGCTTCCTCCT GTTTGACCCCGGCTGATACGGCCATTGCATGATGCCCAGAATGGATGGGA AGAAAACACACACAACACACGGTGGCCAATCCCGCTCGTGGTCTGCTGAA CAGGGAAAAGAGAACAAAATAAAAAGTCTGGAAGCATACCCCCCCCCCCC CAACCCCCACACTGCTCTTTCAGAGAAAAAATAAGTAGATGTCATCGGTA CGCGATTGCATGACCCGATGAACTCGGGGTGAAACCCGACGGCGGTCTAT GGTATAGGCGAACGCCGTCCTGGAAAGCGAGGCCCGTGCGTGGAGCCCGT GAGTTAAGCACCAGGTTCAGCCAGGGTGTTCAGAATGAGCGGACTGACGC GGGACAGGACGCCCGAACCCATATCGCGAGACTAAATTCTCAGGCGCTAA CGGTGACGTAGAAAGTTTATTTTCCTTGTTCAGCTGGCCACAAGCAGGAT TGGCAAGCATACCTGGTTGATGCCCAGTCTCGCTATATGCGATGACAAAA CATACTCACACTCCTTGCCGTCTCCACGAACCCTCAAGGTTCATTTCAAA CGTATGATTACCGGGTGCGTAAGCTCCAGTGCAGTACAGCAGTCAGTCGT GACATGTTTTTATCTGGAGTGCACTTTAAGAGTGTTCCAACGATTGGGGG GGGCGGGGATACGATGATTCCGTCCCCGGGATGGCACCAAAACTAAAAAC TACCCCTTCCGGGGATAGGACTACATGATCCCCTATATAGTCAGCAAGCT TACCCCGAATTCAACTAATTTCACCAGGGGGTTGGTCAAACAACTCCCCG GGAGGGGCTATTTTCGTGCCGTTCCCTCCCGAAACGGGGACAAGTTTGTT ACATCCCCGCCCCCCCCCAATCGTTGAACGACTCTTGAAGTCCATAAGCT CCCAAGTTCTTAAGGAAACCATCTTGCGTGCTATAGAAGCAAGTTCCAAC ATTAGTTGGCACGTCCTGTGTGTGCTGTATGTGTGAGTTGCCTCTTCCCA TTTATTCTGGACTTCAGCCTTGTGGACGCACCAGCCGGGGTCACACAGGA TTTCTCGTTCACCTCCCTTCTGCAGTGCTTGCCTCAATTTTTCTCTCGAA AAGGGTTCAGCCGTTCCTTTCCCTCGTCGGCCGTGAAGCCGAATTTTTGT GTACTATGAATAACGAAATAATCATTCTCCACGTGTTGGGCATTTTTTAT TTGGTTACCAACTGAACCACCGGGGCGACCGGGTTCCAGTCGAGACGAAA CATACGCTCGTTGTCGACAAATATACAAAGTAGTGTACCGTATTCGTTGC AACATATAATATGTACTTAACAGCAGTTTCGTGCCAGACTGTATAATTTT AAGGTAGGGCAGTAGTAGCTCTAGTGCAGTAACGAACGAAATGACAACAC CTCGCAAGGTTGCCACCGTCCGTCGGTAGGTTGCCACCGTCCGTCGGTAG GTTGCCACCGTCCGTCGGTAGGTTGTCACCGTCCGTCGGTGGTGGAGCTA GCTCTGCAGGATGCGATCGATGCTCCACGTACAAGAATAACTCCGTCTGA CCTCAACCTACTCATCTTTGTGGGCGCAGTCTGCTGCTGGTACTGTACAT AATTTACTCACCGGAAGCTCCAAGGATAGTACCTTGCGCATACACCTTCA GGAAACTGTATTGTACTTTCAACATGCCCACTGCATACCAATAGTGGGTG TGAGAAAGAGAGGCGTATATAAATTGGTTCGTAGTGACCTGCTAAGGCAG CACTCGTGCGGAACTACCTTGAAGTTTACTGGCCCTGTGCGGGCGGACTC TCGGCAGTGAACGCCATCGGTACGCAATTGCGTGACCCGATAAACTTGGG ACTGACCCGATGGCGTATGGCGGTTTAATATGAATATATGGACGCCGCCG CGGAACTCGGGAGGAATCCCGTAAGTAAGCACTAGATTCAGCCTGAGTAT GGAGATGAGCAGGCTGACGCGGGACGGAACTGCCGAAACCGTCTCGCGAG ACCAAATTCTCAGGCACGAACGCTGACAGGGAAATATTTTTTCCCCTTTT CAGCTGACCACGAGCAGGATTGGCAACCTTACCCGGTTGATCCATACTCT TGCTATATGTGTGACCATACATACATGTATGGTCACACATATAGCAAGAG TATGGATCAACCTGTTAAGGTTGCCAATCCTGCTCGTGGTCAACTAAACA GAGAAAATAATATTCCCCCTGTCCGCGTTCGTGCCTGGGAATTTGGTCTC GCGAGACGGTTTCGGCAGTCCTGTCCCGCGTCAGCCTGCTCATCTCCATA CTCAGGCTGAATCTGGTGCTTACTTACGGATTCCTCCCGAGTTCCGCGGC GGCGTCCATATAATAATATTAAACCGCCATACGCCATCGGGTCAGTCCCG AGTAAATCGGGTCACGCAATTGCGTACCGATGGCGTTCACTGCCGAGAAT CCGCCGGCACAGGGCCAGCATACCTCAAGGTAGTTTCGAACGAGTGCTGC CTTCGCAGGTCACTATGGACCAATTAATATACGCCTTTCTTTCCCACACC CACTATTGGTTATGAAGTGGGCATGTTGAAAGCAACGGCGACACCTACAC AACTACTGAATCTACAGTAGTAACACTATTAGTCTGCGTAATCAAAACAA AGTACTGTACCAGGCGTACAATGTACTGTAGACCTATTGATAGTCCCACA CACAGAGTCAGTTACTGTACATGAAACGTACGAGTGCAAATATTCGGAAC CGCAGCATCAAAAACCAGTACCAGTATTACTATAGATAGTAGAACTGCAC TAAGTACCTGGTACTTATACTTGAACCCGTTATCACGCCGAAAATCCTGT ACACCTGGAGGGTGGGGTGTCACCGAATCGCGGGCTTAACCTCCGAACCC CGATTGGATTGGTCCACTGCAGGCCTTGGAGATGGCGGAGCGGGGGGCGA ACTACTACCAGCTGCTGGGTTTGCGGCGAGGATGCAGTGCGATCGAGATC AAGAGAGCGTACAGGCAGCTCTCGCTCGAGCTACACCCCGACAAGAATCC CTCTCAAGACGCTGCCGAAAGATTTTCCAAAATGACCGCCGCTCTCGAGG TACGAGTGCAGTCAGTAGAACAGTACACAAGTACCGTTTAACGTCTACCC GTAATTCGATGATCCTTCCGCGTGGTTCCATCAAGGCGGGGACCGTTGTC GTACGAGAGAACATTGCGTCGTAGGTATGATAGTTTAAAGAAAAACCAGA ACGCAGTAGTGAGCATCCTCCAGTCAGAAGAAAAAATGTCAAAACGTTTA GGTGGGATAGTTACAGTAGTACCCGTAGCGGAGTTATTGCTTGTTGTTCT CGTCTACGGGAGTTGACACGACGTATCTGGTCCTTGGAAGGCGTTTTCCT TATTTTTTCTGCCATTGTTGGCACTCTGCGTGCGACACCCTCGACAGATC CTTATGGATTCGGAGAGAAGGGAAATTTACGACAAGCTCGGGCCGGAGAA GGCAGCGTCCAAGCAGCCCGTTAACGAGAACACCATGCTCGTAGAGGTGA GTAGATCATTCGTGGTATGAAGTGAGGCAAGCAGGAGTTCCTCGCTACTC TGAGCACGGCGGTATATGTCAGTCCGTTAGCGCTCCGAGTGGTGTGCCAT GATGGGTCTTGGGTATATCTCATGATTTCTCCTGTTTAACGAAAAATCGA AATGCATCTAGACCTTCTGAGCACCACCCCCCAGTCATGGGGGAAAATGT CAAAACGTTTAGTTGTTTGGTGATAAGAGGCCAACAAAAATGCCGTACAA GCTGGGCTGGCCAAGAAACTGACTCCTGTTCGTTCATGTCTCGCTCTGCC GTTTCTACGAGTTAAAGCTTGAAATTTGGAGGCTGCTCCTATACGGCAAA AAGGGAAGCGCAGGCGCCGGAATTTTTCGAATCCGAGTTGATTTTGGTAA ACAATAACCAAATGGCGGCGTAGTGGAAGATACTTCCTATACTAAAATCA GTATGAAAAAAAGTGTCACGGGTCAAGCTGAAATTTGGTGTACACGTACC CAGGAGCACCGCAAGAGCGTGGGTGGTAGTTACAAGGCTCGCCTCGTTTT CTATCAAGAGTTGCGGCCTCGTAAAGATTCCGATACATAACACAAGTGAA CTGAGGAAATGTGGGGGTATCGCGATTTGCCACGCGGGTTTTACGATTTT TCACCTGAACTTTCGACACGTGATTTAGACCGCTCTTGCGGAGAGGACCA CCCCTGCACATTTTTATTTATTTTTATTTTTCCCATAATTTTGTCGCGAA ACAAATATTCCCACATCTACTTATATCCGGCTATCATACCATAACTTACG AAAAAAAAAACTAAAACCAAAATGTGCAGGGGTGGTCCTCTCCGCAAGAG CGGTCTAAATCACGTCAAAATTTCTGGTGAAAAATCGTAAAAACCGCGTG GCAAATCCCATTCCGCCATGTGTACAGCGTCTTGGCCAGCCCAGCCTATA GTGTGTGGTCAGTCCAGCTCTCTAAGCTGGTAATTCGACAGGCTGCTTCG AAAACGACCGCGGGCCGTAAAAATGACCGCGCCAGCCTTGCTTTGCCTTG GCTTGCGGTGCCCTGCCACTGACTCCCCTGTCCTGCTGACTTTTAGATGG CCGTGTGGTACTTGACCTGGGGTGTCCTGGCGTACGTGATGACGCTGGGC AAGAGCAACCGACAGGCGAGAGACTGGGTATTCACGGGGCAAATCGTGAT GCTGGCGGCGGAGGTGGCGATCGTCACTACCCCTGGGGTCGGGGGGGTGC TGCCGTCGTGGTTACTCCCTGGCATGGCGGAGCATGAGGTGCGGATGGTC CGCTTGCTGCATCCATCCCTGCTGTATTCATCCACATACGTTGTGTATAG TGTATATCAGAGAGTGTTTGTGTTTTCTATGTTTTCTTCCCATCCATTCT GGACATCAAGTTGGACGTACCAGCCGGGGTCACACAGGAGGAAGGTCACA CAGGATTTCTCATCCACCTTCCTTCTGCGGTGCGTGCCTTAATTTTTATC GCGAGAAGGATTCAGCCATTCCTTTCCCTCGTCGACCGTGAAGTCGAATT TTTGTGTACTCACGAATTAATCGTTCTCCACCCGTTGGGCATTTTTATTT TGTTTTCTAGTTTTTAGTGAGAAAAATCCCGTTTGCCGGGATCGAACTCA CGTCCCGACGTGTCAGAAGGTTGCGAGGTACCTACTGAGCTACCGGGGCG ACTGTGATGATATTTATCGTGTTCTAGTGTTTAAATATTATGCAACGAAA AATGTCCGTTAAGCGAAGGTCAGGCGAAGTCAAGGGTCGTACAAGTCAAG ACAAGTGTATTGCCCTGTCGCGCGGCTGACTGCGTTTTCTTGCTCGATTG CTGGCTCCCAGCGGAAAAGGGGCTAAGGACTCGCACGCATTGATCCCGAT GGGTTAGACGCTGTTCCAGTTTCGTGTAGAACAATCAGCCGTCCCCCTTC CTGAAGACGCCACCTCCCACTTTTACCGCCGTTTTTGAAGGTGGTGTGGA TACTGCACTCGATTTTCCCTGCCTTCATGAACGGCTGCCGTTCGCTGGGG AGCCATCTGTACGTTGACGTGGAGCAGCAGACGCGGGACATGCTCCTCGC CCTCAGGGCCGGACATCAGGTGACGAATCTACTTTTTTTATGGTATACTG CAGCTCTTTTGCTCGGATATTCGCACCGGTACACCCTCACCTGGCGTATC TTACCGTAGGGTTAGTGATACTTGTTCCGACTTGCAGCAAAGTGACCATG ATGCTTCACTGTCGTCCCCTCTTGCTACTTATGGGGGGGGGTATGCGCTT CGCGCAGGATGTGCTCGTTGTTCTTCGTGATATCCAGGGGAGTATCAACT CGCTCGCTTCAAACGGGGGAGCACGGCTGCAGAACAGCTCAACAAGCGGG TCCACCGGGTCCAGGGTTCTACCCGCTAGGGCATCCGCTGTTGGGAAGCT CAGGTGATTGGATTTGCTATAAGTAGGCGTTTTGTTTGCGTCTTTTCCGG TAAAGCATGTGAAGGTTACCACCTTAGTTCTAGATAGTCGGGTTTGCGCA TGGCCGGCCTTAGCATTTTACCAATAGACCCTAACGTAGACTTTTTACTT GTGCGCTTACTTGAAGTTTGTCTGGGTTTGACGTCAACAAAGACATTTTT TTCCCCTGACTGGGGGATGCTCAGAAGGTCGAGGCGCGTGGTCTGGTTTT TCTACAAAGAAAAAAAAAAAGCACATTTACAGGCAAATGATTGCTTGAAG GTGTGAGGTGCTTGTATACCATAAGTATCGGAGTCTAGGCACACACCCTA GACTGACTTTCCAGGCTCGATTGCTCCGCAACCAAGAGGGTTATACTGGT TATAGTATAGGTGCCAATGTCGAAAAGGGCGGTTATCGAAAGATTGATGA TCTCGTCGAGAGCTTTCTTTAGACGTATCGGTCGATGTTCACATCCTCTT GGTTGTGGAGCAATCGAGCCTGGAAAGCCACTCTAGGGGGTGTACCAAGA CTCCGATACTTAGGGTAACAGCGAACCATCCGCATGCGCTGTATAACGAG AGCTTTGTCTGCCATTGCCCGTGCCGTCCACCGAACAGGGAGTTGGAAGA TAAGTTGAGCCGAAACAGCACGGGGGTGGATGCCGTGGCCGCTCAGATCA AGGACTCGGGGAAATCGAGCGGAAACATGCAGTGGCTGCTGGTGGCGGTT TGGGTGCTGTTTTACTTCTTCCTCAACAACAGCGGGTCTTAAGATGGTCC TAGAAAGTGCGTTGCACGAAGTGCCCTTATACGTCCTCCTCCCAATCATG CCGTCTGTTGCGCAAGGATTCCGCCGCTCGGCAACAAAGTGTGAGGGGCA AGATGGGGAGCCCTACCGATACAAACTTAAAAGACACGTGCACTTTGGTG ATGGATAAATTTATAGCAATTCTCCCCCCTCTGGCCGGGGAGGGTCAGTT TTGTATTGTTGCTTCTTGGAGCGGTCTCAGCTTGTACAGCGCCCGATCTG AAAAACTATACTGGTATTCATATACTGGTTCGGTAGAGCTACGGCGTACT TGTACAATACAACACGGTACGAACCTGAGTGCGCTGTGCGCCACCGGTGG CGGAAAGGGAACCTGCAGCCGCATCTGGCGGCACAGTCAAAAGCCAAGAT TTTGCTATTCGGCGAGAATCATTACTCGATGAACATCACGGAACGCTGAC GGTTTATTCTTGTCGAGACTTCTTGTCGAGATTGTTTACCGAAGATTATT ATATGGGTGGCTTGACAAGTCTAGCTTCGATGCCCACGAGAGATATATAT CCCGGGGTTTCTTTCATTTTTTCCCCTGGTACCGTGGCTTCTTCCGGATA ATTGAGACGGTAGGACGGTCTGCATTCCTCACACCGCCTCTCTCCCCTAC AGCCAACGGCGGCCACGAAAACGCCCTTATCCTCCGGTCTGAGCAGATGC TAAGTGGTATCCGGGAACTTTCCTCGAGACTGTCGAAAACTCCTCTATAG AAACTCCTGTCGATACACACTAAAATATTATCATATCCATAGCACAGTAC CCCAAGTCTTCCACAGCAGTGTGCATTTCTGGACTTTTAAATGTTTTTTT TTTTTTTTCACGTTCGGGTGTGCAGTAGTAAGTGTCTGTTGAGGTGTAAC AATACAAACTTTTGCGTGTTAATAAATAGATTGGTTACTGTTCAACGTCT TTTAGAACCCGGCCAGGCAAGTGTCTTGTTTTTTATAGGGTGATTTGGCG TAAGATGACGATTTCATTGTGTTGTGTAGTATCTTTTCGACAAACGAGAG CGCTCATGTGTAATACTAAAAACAAAATTAGAAGGTCTAGATGTGTTCAG ATTTTTCTCAGATTTTTCTTTAAACCGTGGTTGTACCCCTAAAATCTCGT GCCCATCACCATCTATGAATATATGGTCACGCATATAGCAAGAGTATGGA TCAACC
back to top

Coding sequence (CDS) from alignment at F-serratus_M_contig882:76006..85261+

>mRNA_F-serratus_M_contig882.20195.1 ID=mRNA_F-serratus_M_contig882.20195.1|Name=mRNA_F-serratus_M_contig882.20195.1|organism=Fucus serratus male|type=CDS|length=2124bp|location=Sequence derived from alignment at F-serratus_M_contig882:76006..85261+ (Fucus serratus male)
ATGTCGGAGTCATCGGAATCAGCTGGAGCACTGGGTACACTCTTCTTCTA
CGTTCTATTCGTTCACCCGGTGTGCTCTTGGATCCTCGCGCCCAAACGCT
TTCGTAAGGACCGAGCGATTGTCTACGCCATCCTGTTCCTGGCCACCATA
GCTTTTGGAAAGATGATGTCGGAGTCATCGGAATCAGCTGGAGCACTGGG
TACACTCTTCTTCTACGTTCTATTCGTTCACCCGGTGTGCTCTTGGATCC
TCGCGCCCAAACGCTTTCGTAAGGACCGAGCGATTGTCTACGCCATCCTG
TTCCTGGCCACCATAGCTTTTGGAAAGATGGCCTTGGAGATGGCGGAGCG
GGGGGCGAACTACTACCAGCTGCTGGGTTTGCGGCGAGGATGCAGTGCGA
TCGAGATCAAGAGAGCGTACAGGCAGCTCTCGCTCGAGCTACACCCCGAC
AAGAATCCCTCTCAAGACGCTGCCGAAAGATTTTCCAAAATGACCGCCGC
TCTCGAGGCCTTGGAGATGGCGGAGCGGGGGGCGAACTACTACCAGCTGC
TGGGTTTGCGGCGAGGATGCAGTGCGATCGAGATCAAGAGAGCGTACAGG
CAGCTCTCGCTCGAGCTACACCCCGACAAGAATCCCTCTCAAGACGCTGC
CGAAAGATTTTCCAAAATGACCGCCGCTCTCGAGATCCTTATGGATTCGG
AGAGAAGGGAAATTTACGACAAGCTCGGGCCGGAGAAGGCAGCGTCCAAG
CAGCCCGTTAACGAGAACACCATGCTCGTAGAGATCCTTATGGATTCGGA
GAGAAGGGAAATTTACGACAAGCTCGGGCCGGAGAAGGCAGCGTCCAAGC
AGCCCGTTAACGAGAACACCATGCTCGTAGAGATGGCCGTGTGGTACTTG
ACCTGGGGTGTCCTGGCGTACGTGATGACGCTGGGCAAGAGCAACCGACA
GGCGAGAGACTGGGTATTCACGGGGCAAATCGTGATGCTGGCGGCGGAGG
TGGCGATCGTCACTACCCCTGGGGTCGGGGGGGTGCTGCCGTCGTGGTTA
CTCCCTGGCATGGCGGAGCATGAGATGGCCGTGTGGTACTTGACCTGGGG
TGTCCTGGCGTACGTGATGACGCTGGGCAAGAGCAACCGACAGGCGAGAG
ACTGGGTATTCACGGGGCAAATCGTGATGCTGGCGGCGGAGGTGGCGATC
GTCACTACCCCTGGGGTCGGGGGGGTGCTGCCGTCGTGGTTACTCCCTGG
CATGGCGGAGCATGAGGTGGTGTGGATACTGCACTCGATTTTCCCTGCCT
TCATGAACGGCTGCCGTTCGCTGGGGAGCCATCTGTACGTTGACGTGGAG
CAGCAGACGCGGGACATGCTCCTCGCCCTCAGGGCCGGACATCAGGTGGT
GTGGATACTGCACTCGATTTTCCCTGCCTTCATGAACGGCTGCCGTTCGC
TGGGGAGCCATCTGTACGTTGACGTGGAGCAGCAGACGCGGGACATGCTC
CTCGCCCTCAGGGCCGGACATCAGGATGTGCTCGTTGTTCTTCGTGATAT
CCAGGGGAGTATCAACTCGCTCGCTTCAAACGGGGGAGCACGGCTGCAGA
ACAGCTCAACAAGCGGGTCCACCGGGTCCAGGGTTCTACCCGCTAGGGCA
TCCGCTGTTGGGAAGCTCAGGATGTGCTCGTTGTTCTTCGTGATATCCAG
GGGAGTATCAACTCGCTCGCTTCAAACGGGGGAGCACGGCTGCAGAACAG
CTCAACAAGCGGGTCCACCGGGTCCAGGGTTCTACCCGCTAGGGCATCCG
CTGTTGGGAAGCTCAGGGAGTTGGAAGATAAGTTGAGCCGAAACAGCACG
GGGGTGGATGCCGTGGCCGCTCAGATCAAGGACTCGGGGAAATCGAGCGG
AAACATGCAGTGGCTGCTGGTGGCGGTTTGGGTGCTGTTTTACTTCTTCC
TCAACAACAGCGGGTCTTAAGGAGTTGGAAGATAAGTTGAGCCGAAACAG
CACGGGGGTGGATGCCGTGGCCGCTCAGATCAAGGACTCGGGGAAATCGA
GCGGAAACATGCAGTGGCTGCTGGTGGCGGTTTGGGTGCTGTTTTACTTC
TTCCTCAACAACAGCGGGTCTTAA
back to top