mRNA_F-serratus_M_contig88.20182.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig88.20182.1
Unique NamemRNA_F-serratus_M_contig88.20182.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig88.20182.1 vs. uniprot
Match: D7FNU3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNU3_ECTSI)

HSP 1 Score: 368 bits (945), Expect = 1.610e-109
Identity = 278/667 (41.68%), Postives = 395/667 (59.22%), Query Frame = 1
Query:    1 MSCITVP--KKWGGSTAP-RIET-MTPVVPVATAHKRLTKK------ARGSPQLVDTMREVVQAFELEFVQVRAAAVELKAVLDDRRTQLVDLRQHLEKESGDNGILEAVVQHRSSKNEFSDKRLAELEHEFCEILENDRIVAVRIAGLESDVGVFTDEYRRIQENTSVVLSQLTRAEAALEERERAFALGLREGERLSSELQETRRKLEDLQSKTEKAHEKASRMKSLASDAARDLKALEEQVALLRSDVDAKESDMSVVAFTAASTERKADETKGMIREDRAIHTQRLRDSQDRLVNIKRLVEDKENAHVELEGRIQALQLAVAAESEAQDTKRSEIEAMRTNLSSPNKQESVEVKMRDISAQIKVVEAEVAQREEAVTTASERMQEANKEFSNLMAAMSAAFCEYDQAVTSNRELTSETEKTASALSTLRERSQQDLIAMREVSNKLTASNEENRATAEADRKLAMALVETIHETQKTVDGMILELETRREMITTGRSRLEEGCARKRAQDEERAERMRAAKEAFAVAQQKLLHVRGQLEQRQSELVKFRQQAGDRICAPARLNEGDLQHAEEEARKTVEKIRA-NETKAHVAHLHSLKSTLATIREGGAARLKAEKDAARARVTALQNQKREVLQSIMELRDRFEAAQQTEKALEKEINNLRE 1968
            MS ITVP  K WG S A  R+E+ + PV+P AT  +R T K      AR +  LVD++REVVQAFELE+ Q RA +VELKAVLDD RTQL DLR+HLEKES +NG LEAVVQHR+++N   D RL ELE  F ++L ++  +A   A LESD+ VFT E++RI++ T+   S L  A+A L +RER  A    E +RL++ ++  RR + D +       E+ASR ++LA +AA D KALE +VA LR D+                  +   ET   I + +A   + L+D+QDRL  +K+ V  KE A  EL+ R++A Q A+ AE                       +E+V+ ++R +S Q+   +AE+ + EE+V  AS+RM+ AN EFSNLMAA+S  F EYD+AVT+NR+L  +   T SAL  L E SQ DL+ + E  ++L ASN E RA AEADR+ A  L   + ++QK VD     +  ++ ++   + RL+EG AR +A+ E + + + AA+   A A+ +    R +LEQ Q+ ++ F Q+A      PA L E D Q  E+EA   V++ RA    ++H   L  L+ TL TI+EGGAA+LKA K+A  AR+T+L++Q       + +LR R EAA+  E AL  ++   RE
Sbjct:    1 MSSITVPTTKTWGRSAASSRVESAVVPVMPAATPIQRRTAKKSKNSNARATVHLVDSVREVVQAFELEYSQARAESVELKAVLDDHRTQLSDLRRHLEKESSENGTLEAVVQHRAARNTAGDARLRELEAAFKQVLADEGHIASSAAALESDLVVFTAEHKRIRDKTATAASWLDLAQAGLLQRERTLAAAQSESDRLTAAVEAGRRAVADREGLLRGEQERASRSRALAGEAADDAKALESEVAGLRRDLARXXXXXXXXXXXXXXXXKHTAETTVRIAKAKATRAEDLQDAQDRLAELKQQVATKERAKTELDERVKAGQEALVAERXXXXXX-----XXXXXXXXXXXKETVDAEVRLLSDQLATADAEIVKAEESVAQASDRMKRANAEFSNLMAALSLVFREYDKAVTANRQLELDATDTESALKALSEESQGDLLLLHEKRDRLRASNAELRAAAEADRRRAEELEILLCDSQKGVDEATASIAAKQVLVADTKKRLQEGEARLQAKKERKTQALHAAEGCVAAAEVQAQASRARLEQCQTAVIAFDQEAAAWTPPPATLGEEDRQRVEDEAAAAVQRARAAGGDESHAKRLRDLEETLTTIQEGGAAKLKAAKEAKAARLTSLRDQVLHASHELADLRSRGEAAKNVEAALNLKLEARRE 662          
BLAST of mRNA_F-serratus_M_contig88.20182.1 vs. uniprot
Match: A0A6H5KW75_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW75_9PHAE)

HSP 1 Score: 266 bits (681), Expect = 1.890e-71
Identity = 248/689 (35.99%), Postives = 352/689 (51.09%), Query Frame = 1
Query:    1 MSCITVPKK--WGGSTAPRIET-MTPVVPVATAHKRLTKK------ARGSPQLVDTMREVVQAFELEFVQVRAAAVELKAVLDDRRTQLVDLRQHLEKESGDNGILEAVVQHRSSKNEFSDKRLAELEHEFCEILENDRIVAVRIAGLESDVGVFTDEYRRIQENTSVVLSQLTRAEAALEERERAFALGLREGERLSSELQETRRKLEDLQSKTEKAHEKASRMKSLASDAARDLKALEEQVALLRSDVDAKESDMSVVAFTAASTERKADETKGMIREDRAIHTQRLRDSQDRLVNIKRLVEDKENAHVELEGRIQALQLAVAAESEAQDTKRSEIEAMRTNLSSPNKQESVEVKMRDISAQIKVVEAEVAQREEAVTTASERMQEANKEFSNLMAAMSAAFCEYDQAVTSNRELTSETEKTASALSTLRERSQQDLIAMREVSNKLTASNEENRATAEADRKLAMAL---VETIH-----------------ETQKTVDGMILELETRREMITTGRSRLEEGCARKRAQDEERAERMRAAKEAFAVAQQKLLHVRGQLEQRQSELVKFRQQAGDRICAPARLNEGDLQHAEEEARKTVEKIRA-NETKAHVAHLHSLKSTLATIREGGAARLKAEKDAARARVTALQNQKREVLQSIMELRDRFEAAQQTEKALEKEINNLREHAR 1977
            MS ITVPK   WG S+  R+E+ + PV+P AT  +R T K      AR +  LVD+               RA +VELKAVLDD RTQL DLR+HLEKES +NG LEAVVQHR+++N   D  L ELE  F ++L ++  +A R A LESD+ VFT E++ I+  T+   S L  A+A L +RERA A    E +RL++ ++  RR + D ++      E++SR ++LA +AA + KALE +VA LR D+  KE +      T A+ ++               HT                V  KE A  EL+ R+QA Q A+ AE   Q  KR+                                                     N EFSNLMAA+S  F EYD+AVT+NR+L  +  +T SAL  L E S++DL+ + E  ++L ASN E RAT EADR+ A  L     T H                 ++Q  +D     +  ++ ++   R RL+EG AR +A+ E +A+ ++AAK   A A+ +    R +LEQ Q+ ++KF ++       PA L E D Q  E+EA   V++ RA    ++H   L  L+ TL TI+EGGAA+LK  K+A  AR+T+L++Q       + +LR R E A+  E AL  ++   RE  R
Sbjct:    1 MSSITVPKTKTWGISS--RVESAVVPVMPAATPIQRRTAKKSKISNARATVHLVDS--------------ARAESVELKAVLDDHRTQLSDLRRHLEKESSENGTLEAVVQHRAARNAAGDASLRELEAMFKQVLADEGHIASRAAALESDLVVFTAEHKCIRNKTATAASWLDLAQAGLLQRERAIAEAQSESDRLTAAVEAGRRTVADREALLRGEQERSSRSRALAGEAADEAKALESEVAGLRRDLARKEEEGXXXXDTLAAIKK---------------HTAE--------------VATKERAKTELDERVQAAQEALVAERVDQKAKRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--NAEFSNLMAALSLVFREYDKAVTANRQLELDAAETESALKALSEESERDLLLLHEKRDRLRASNAELRATVEADRRRAEELELIFGTTHSVVVVDDDGFLVVRGPGDSQNALDEATASIAAKQVLVADTRKRLQEGEARLQAKKERKAQALQAAKGGVAAAEVQAQASRARLEQCQASVIKFDRETAAWTPPPATLGEEDRQRVEDEAAAAVQRARAAGGDESHAKRLRDLEETLTTIQEGGAAKLKVAKEAKAARLTSLRDQVLHASHELADLRTRGETAKNMEAALNLKLEARREEQR 642          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig88.20182.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FNU3_ECTSI1.610e-10941.68Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KW75_9PHAE1.890e-7135.99Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig88contigF-serratus_M_contig88:804806..812510 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionhypothetical protein
Ec32 orthologEc-12_003350.1
Exons9
Model size2952
Cds size2952
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932566.9473708-CDS-F-serratus_M_contig88:804805..8051381622932566.9473708-CDS-F-serratus_M_contig88:804805..805138Fucus serratus maleCDSF-serratus_M_contig88 804806..805138 -
1690964369.192527-CDS-F-serratus_M_contig88:804805..8051381690964369.192527-CDS-F-serratus_M_contig88:804805..805138Fucus serratus maleCDSF-serratus_M_contig88 804806..805138 -
1622932566.9727895-CDS-F-serratus_M_contig88:805575..8058181622932566.9727895-CDS-F-serratus_M_contig88:805575..805818Fucus serratus maleCDSF-serratus_M_contig88 805576..805818 -
1690964369.2018657-CDS-F-serratus_M_contig88:805575..8058181690964369.2018657-CDS-F-serratus_M_contig88:805575..805818Fucus serratus maleCDSF-serratus_M_contig88 805576..805818 -
1622932566.995859-CDS-F-serratus_M_contig88:806105..8065061622932566.995859-CDS-F-serratus_M_contig88:806105..806506Fucus serratus maleCDSF-serratus_M_contig88 806106..806506 -
1690964369.2103047-CDS-F-serratus_M_contig88:806105..8065061690964369.2103047-CDS-F-serratus_M_contig88:806105..806506Fucus serratus maleCDSF-serratus_M_contig88 806106..806506 -
1622932567.0157144-CDS-F-serratus_M_contig88:806604..8067401622932567.0157144-CDS-F-serratus_M_contig88:806604..806740Fucus serratus maleCDSF-serratus_M_contig88 806605..806740 -
1690964369.2199354-CDS-F-serratus_M_contig88:806604..8067401690964369.2199354-CDS-F-serratus_M_contig88:806604..806740Fucus serratus maleCDSF-serratus_M_contig88 806605..806740 -
1622932567.0386548-CDS-F-serratus_M_contig88:807133..8073641622932567.0386548-CDS-F-serratus_M_contig88:807133..807364Fucus serratus maleCDSF-serratus_M_contig88 807134..807364 -
1690964369.228611-CDS-F-serratus_M_contig88:807133..8073641690964369.228611-CDS-F-serratus_M_contig88:807133..807364Fucus serratus maleCDSF-serratus_M_contig88 807134..807364 -
1622932567.0594244-CDS-F-serratus_M_contig88:807748..8083531622932567.0594244-CDS-F-serratus_M_contig88:807748..808353Fucus serratus maleCDSF-serratus_M_contig88 807749..808353 -
1690964369.2368624-CDS-F-serratus_M_contig88:807748..8083531690964369.2368624-CDS-F-serratus_M_contig88:807748..808353Fucus serratus maleCDSF-serratus_M_contig88 807749..808353 -
1622932567.0827234-CDS-F-serratus_M_contig88:808714..8089251622932567.0827234-CDS-F-serratus_M_contig88:808714..808925Fucus serratus maleCDSF-serratus_M_contig88 808715..808925 -
1690964369.244989-CDS-F-serratus_M_contig88:808714..8089251690964369.244989-CDS-F-serratus_M_contig88:808714..808925Fucus serratus maleCDSF-serratus_M_contig88 808715..808925 -
1622932567.1000984-CDS-F-serratus_M_contig88:809081..8096901622932567.1000984-CDS-F-serratus_M_contig88:809081..809690Fucus serratus maleCDSF-serratus_M_contig88 809082..809690 -
1690964369.2595508-CDS-F-serratus_M_contig88:809081..8096901690964369.2595508-CDS-F-serratus_M_contig88:809081..809690Fucus serratus maleCDSF-serratus_M_contig88 809082..809690 -
1622932567.1178775-CDS-F-serratus_M_contig88:812327..8125101622932567.1178775-CDS-F-serratus_M_contig88:812327..812510Fucus serratus maleCDSF-serratus_M_contig88 812328..812510 -
1690964369.2685409-CDS-F-serratus_M_contig88:812327..8125101690964369.2685409-CDS-F-serratus_M_contig88:812327..812510Fucus serratus maleCDSF-serratus_M_contig88 812328..812510 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig88.20182.1prot_F-serratus_M_contig88.20182.1Fucus serratus malepolypeptideF-serratus_M_contig88 804806..812510 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig88.20182.1

>prot_F-serratus_M_contig88.20182.1 ID=prot_F-serratus_M_contig88.20182.1|Name=mRNA_F-serratus_M_contig88.20182.1|organism=Fucus serratus male|type=polypeptide|length=984bp
MSCITVPKKWGGSTAPRIETMTPVVPVATAHKRLTKKARGSPQLVDTMRE
VVQAFELEFVQVRAAAVELKAVLDDRRTQLVDLRQHLEKESGDNGILEAV
VQHRSSKNEFSDKRLAELEHEFCEILENDRIVAVRIAGLESDVGVFTDEY
RRIQENTSVVLSQLTRAEAALEERERAFALGLREGERLSSELQETRRKLE
DLQSKTEKAHEKASRMKSLASDAARDLKALEEQVALLRSDVDAKESDMSV
VAFTAASTERKADETKGMIREDRAIHTQRLRDSQDRLVNIKRLVEDKENA
HVELEGRIQALQLAVAAESEAQDTKRSEIEAMRTNLSSPNKQESVEVKMR
DISAQIKVVEAEVAQREEAVTTASERMQEANKEFSNLMAAMSAAFCEYDQ
AVTSNRELTSETEKTASALSTLRERSQQDLIAMREVSNKLTASNEENRAT
AEADRKLAMALVETIHETQKTVDGMILELETRREMITTGRSRLEEGCARK
RAQDEERAERMRAAKEAFAVAQQKLLHVRGQLEQRQSELVKFRQQAGDRI
CAPARLNEGDLQHAEEEARKTVEKIRANETKAHVAHLHSLKSTLATIREG
GAARLKAEKDAARARVTALQNQKREVLQSIMELRDRFEAAQQTEKALEKE
INNLREHARRAAEAQAAAAAEAQAVAAAEAQAAAAAEAQAVAAAEAQAVA
AAEAREAAEVQAAAAAAAQASASRAKDSPVAASSYIIPNEYPANRTFTGV
RRLDTHVERLSIQSPGLAGKITEGNSTATYSTLNVRPNPDPDSHALGPAR
GRNFSSNHPPIPPSIMIQLRQVTTTVMKCAPSRGHSDRRSHKSPGRSSKF
SRSYSRDATRSQQASESTAEAAESRDTNTSEGKYGTTNGSNSGRGSRHKK
DKPLSRTSSKSVNHPDGGHKRSSRRKGDDTSRGRQGIDSSRKGRPRSKSG
SPRSLPRSPRPADKEYDLWTDNSLVGDSDFSFF*
back to top

mRNA from alignment at F-serratus_M_contig88:804806..812510-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig88.20182.1 ID=mRNA_F-serratus_M_contig88.20182.1|Name=mRNA_F-serratus_M_contig88.20182.1|organism=Fucus serratus male|type=mRNA|length=7705bp|location=Sequence derived from alignment at F-serratus_M_contig88:804806..812510- (Fucus serratus male)
ATGTCGTGCATCACCGTACCCAAGAAATGGGGTGGGTCGACAGCACCAAG AATCGAGACGATGACACCCGTAGTTCCGGTCGCGACGGCCCATAAGCGCT TGACAAAGAAGGCTCGTGGATCGCCACAGCTTGTTGACACCATGCGGGAG GTTGTGCAGGCCTTCGAACTAGAGTTTGTCCAGGTCAGTAGAGATACAGT ATATTATATTTTCAAATTTCACATGAGTCCTTCCATTTACAGTAGTCTAC TCATGTTATGATTTTGTCTCTCTCACTTTTGGCCGATGGGTCTCAACATG ATATGTCTAGCTATAACAGTCTCATCAAATCCGCAAGTACTTTCAACATG CCCACCCAATAGTGAGTGCGGCAAAGAGAGGTGCATATTAATTGGTCCAT AGGGTTACTTACCATGGCAGCACCCGTCTGGAACTACCTTGAGGTTTAAT GGCCCTGTGCCGGCGAACTCTTGGCAGCAGTGAACGCCATCGGTACGCAA TTGCGTGACCCGATAAACTCGGGACTGACCCGATGGCATATGGCGCTTCT AAAATAAATAAATGGACGCCGCCGCGGAACTCGGGAGGAATCCCGTAAGT AAGCACCAGATTCAGGCTGAGTACGGAGATGAGCAGGCTGACGTGGGACG TGACTGCCGAACCCGTATCGCAAGACCGGATTCATTTTCCCTGTTCAGCT GACTACTAGCAGGATTGGCAGCCTCACCCGGTTGATCCTTACTCTGCTAT ATGTGGTGACAATACATACATATGAACCTGCAACGTTGCCATCCTGTCGG TGGTCACCCGGGATACTCCGATTTCCGATTTCTCCTTGGTCTTCACCTTC GATTTTTTAGCGCGGTGCAAGTTCAGCACTTTCAAGTCTCGTGAACCAAT GTTGGAATTTTACTTACTCACGTTGTCACGCTCTCCGCACGGAAATCAAA ATAAAGAAAGTTATATCCTACCAGTATCAAGATCCGAACTCTCAAAATCC GTACCCTACAATTAATAGTACTGAGGCCAACCGCTATGGGACCATGAAAA TACAAAAATGAACAAATTTATGTACCTGGTAGGGCATTTTGTGTGAAGCG CGCTATGGGAGCAAAAAAAAAACGGAAGTGGAATGGTTCATTTTTTTTTT GGAAGTCTGTTTTTTTTTTTGTGGCCACATACGGAAATGAGGTCATTTCT GTAGGCCACAAGAAAAACACGGCAGACCTACGGAACTGTTCACGCCTTTC GAGCCTCTGTACAAAACCTGCCTTTGAGGACGAGATGTGCCCAAGGAGGA CCAAATAACATGCTCAGAAGGTCTAGGTGCGTTCTGGATTTTGTTTCAAC ATCAATTTCATGGCCGCCGTCTGACCCGTATATGTGTGGACGGAAGGTAT GGCTAATGCGGGGGCCGTCGGAGCAAGCGTGATTGAGCACTGGTTCACTG TATGTTGTATCCGGCATCGTTGTGGAGTTGCTGTGATTGCTACCCGATGA TGATGGGTTGTCCCGCCTCATTTTCAAATTTCAAACTGAGTGGCGAGAGT CTTGGATGGCCAGTATTCCACGCATCTCCGTCTTATTTTTGTGTTTTTTT TTCTTCTTCGTTTGTTCGCCCAGCCCGTAAATACTTGCCACGGAAATCAA CAATTTTTGTGTTTCATTTTTCGCATTTTTGTGGTCCCATAGTGGTTGGC ATGATATCTAATGAAGATTATCCACTGTTCCTCCCGAGCGACCACCTACC TTACCAGGCTATTACTGTATCATATTGTACTGTACTTGTAATAGGGATTC GATGATATCCAGCGAGGGGAGTCTGTACGACAGAAAGAAGTCAAGCCCAG ACGGCGTGTTTTATTCTACTCCCACGGTCTCTCTTTCTCTTTCCCACATA AACTGCAACTTGTCAAGAAAAACCCTTGTATTGGCTCTAAACGGCGATTC TCAAACCCGAGAGAAGTACATATCTACAGTACGGTATCGCAGGAAGACCC CCCTCCTTTAATCGTTGTTGTTGGTCACACTTTCTGCCTGCTGGGTATGA ACCGGATGTGGTTGTAACTCCTGACCTCGTCAGCTGAACAGAGAAAATAT TTTTTCCCTGGACCTGAGAAGTTCGGCCCCGCGAGACGGGTCCAGCCGTC CTGTCCCGCGCCAGCCCGCTCATTCTCCACACCCAGCCTGAATCTGGTTG GTGCCTACTCTGAGACCAAATGAGAAGAGCGAGGAGACTCTCTTTACACA CACATTTCTTTAAACACCCAGCCTGGTCCAGGTTGGCCGTACAGTACACA TGAAAACATTGATATGTATTAGTTCTTGGGGTGTTAAGATTTCCTTGCGT TTCCTGCACAGTTGTTCCCTAGCGCGCATGTCTCTCTGAGAAAAAGGACA AATCAAGACGATATAAAATGATTTTTATCAAACACATACCAATACACCTA CCAGTATATGAATATGGAAAAGGAAAGCGCGGCGCCTAGCAGTGTGTGTG GGACAGAGAAGATAAAAGTTGGACGATTTCGAGTGAACAGATTTACATTT TCGCCCTAGGAAAGATATCAACTACGAAGTAATAGAGTAGAAAAAACGAG TCCAGATATTTGAAGACGAAAGATCGTGCTTTACATAGATATCAAGATCG GATGTTAAAAGGAAGATGGGGATTCATGGCGACAGCGCAACAAGTCTGCA TACCTGCTATGTTTAATCGAGGAGAGAAGCGGAACCACTTCGATAGTGTA GTTTCTGAAAAACTTAACCGCCCCTGGAAATTACGACCTTACCCCCGATA GCTTTGCTCCTCGAAACCAGGTCCGAGCGGCGGCGGTGGAGCTGAAGGCG GTGCTGGACGATCGTCGTACTCAACTTGTCGACCTTAGGCAGCATCTAGA GAAAGAATCTGGCGACAATGGCATCCTCGAGGCAGTGGTACAGCACCGCA GCTCCAAGAATGAGTTCAGCGACAAGCGCCTGGCCGAGCTCGAGCATGAG TTCTGTGAGATTCTTGAGAACGATCGCATCGTCGCGGTACGGATAGCCGG GCTGGAATCAGACGTGGGCGTGTTCACGGACGAGTACCGGCGCATTCAAG AAAATACAAGCGTGGTTTTATCTCAGCTGACTCGAGCTGAAGCTGCTCTT GAAGAAAGGGAACGTGCGTTCGCTCTAGGGCTGCGAGAGGGTGAAAGACT GAGCTCTGAGTTACAGGAGACTCGTCGCAAGTTGGAAGATCTTCAAAGCA AGACAGAGAAAGCCCATGAGAAGGCTTCCAGAATGAAGTCCTTGGCTAGC GATGCTGCGAGGGACCTCAAAGCGTTGGAGGAGCAAGTGGCTCTCTTGCG AAGCGATGTTGACGCGAAAGAGTCTGATATGTCGGTGGTTGCTTTCACCG CGGCTTCAACCGAGAGAAAGGCAGACGAGGTTCGTTTTCGTTACAAGTCC TCGCGTGATGTTCCCCTCCGAAGTAGCCTTGTTATATTTCAGGTTTGTTC ATAGGCCAGGTTTGACTCACGAGAGTGTTTGATACGAGTCTAATCACCGG TGCCCCGTCTTGCGTATTCTGCACTATGTACACAGACCAAAGGCATGATC CGCGAGGACCGTGCGATCCACACGCAAAGGCTTCGAGATTCACAAGATCG CCTGGTCAATATCAAGCGACTGGTGGAGGACAAGGAGAACGCTCACGTCG AGTTAGAGGGTCGAATTCAGGCGCTGCAATTAGCTGTCGCTGCAGAGTCC GAGGCCCAAGATACTAAGCGCAGCGAAATTGAGGCCATGCGCACGAGTCG CAAGGCACGATTTTTGCCTCGAATTTCCCACTATGCTCCATCTGGCTTAA GTGGCATACACTTCGTACTATTCCGCCGTTATTATGGGTCGACTCTTCCT TGCATCGATTTTTTCACAAGACCCACACACCTCTGTCGGGGATGTCCGAA ATCACGACGTATGAAAGGCGCTGCTGGCACAAACCTCAACAAGCCTTGGT GCACTTTGACAAGCGCAACCCAATCTGCAGTTGTTCACAAGAGCGTCATC GAAAGATCATTGGATCCTCTGGAATGCTTTCGACGTTCATATCTTTCTAG TGCAATACCAGCATAAGAACTGTACCTTGTTAAGTACCTGGTAGTAACTT ACCAGAGATTTATCTTCCCCAAATAAGCAGGAATCAGTGGAGGTCAAGAT GCGCGACATCTCAGCTCAGATTAAGGTCGTTGAGGCTGAGGTGGCGCAAA GAGAGGAAGCGGTGACGACAGCGTCTGAGCGCATGCAAGAGGCAAACAAG GAGTTCAGCAACCTCATGGCTGCCATGTCGGCGGCATTTTGCGAGTACGA CCAGGCTGTCACTTCGAACCGTGAATTGACAAGTGAAACCGAAAAGACCG CGAGTGCGCTTTCGACACTTCGCGAGCGTAGTCAGCAGGACCTGATCGCC ATGCGTGAAGTTAGCAACAAATTGACTGCCTCTAACGAAGAGAACAGGGC GACTGCCGAAGCCGACCGGAAGCTCGCGATGGCGCTCGTCGAGACAATCC ACGAAACGCAGAAAACTGTCGATGGCATGATCTTGGAACTGGAGACGAGG CGAGAGATGATCACAACGGGCCGAAGCAGACTGGAGGAGGGTTGCGCAAG AAAGCGCGCGCAGGACGAGGAACGAGCGGAACGAATGCGAGCTGCGAAGG AGGCTTTTGCAGTGGCGCAGCAAAAATTGCTTCATGTTCGAGGTCAACTC GAACAGAGACAGGTTTGGTCAACTTAGGTCGCCTTTCCTCGCAAAAAAGC ACTTTCCGTGGACACTTCATTCAGTGATTAATTTGTGTGTGTATTTTAGG CTTTACTATGATGGATCCTGATACTTATCTCTTAGGTTCGCACCTCTGAA GGAGCTTTGTCTGTAGTTCATGTTTGGACGGGGTTGTGCTTACTCGAAGG ACTACCCTAGAGTACATATTTCGTGCTGAAACACTTGTACTTGTATGTAA TACAGAGGTATCTGCAAGAAGGTTACGTCACATGAGAACAAGTTCAAGAC GAATGATCATCGTTACATGTCAACAACATAAGAAGCATTCACTCGGACTC GTTCGATAGGCCCGCCTCCTCCCCGTGATTGCGTCTCATGAATCAGTCGG AGCTCGTCAAATTTCGCCAACAAGCGGGGGACCGGATTTGCGCACCTGCG AGGCTTAACGAGGGCGACCTACAGCACGCAGAAGAGGAGGCCAGAAAAAC GGTTGAAAAAATACGCGCGAATGAAACCAAGGCGCACGTTGCTCACCTTC ACAGCCTCAAAAGTACGCTCGCTACCATCCGCGAGGGAGGTGCTGCGCGG TTGAAAGCCGAGAAGGACGCCGCGAGAGTGAGCGCTTGCACCCAGGCACT TAACGCGCTTATTTTGTAGCAGCCAGTTTTTGTCTGACAAGGTTGCAACC TCGTGCACTTGAATGACGAGCACATCCTCCAGTCGTTTCTAGCGGTTGCG TAATATGGAATTTTGATCTGCTTCGTTTATCGATGTTTCACCCCTACATA TTACGCGTATATGGAGTGTGTATTACTTTTGACAGTACGCGTAGATCGAC GCAGGTTGCCTTCTTGAACTTATGTCCCCACTGGTGACAAATATCTATTG GCGAAGGGGTCCCCAAACCTTACCTCGCGCAGGGATCGTGGGGTGCACCG CTAATCATCGCGGCCGCTTTGCTTAACTTTCGTTGAGTCTCCTATACCAT CGTGCTCGTTGTTGCGACAGGCTCGCGTGACGGCCCTACAAAATCAAAAG CGGGAGGTGCTGCAGTCTATAATGGAGCTCCGTGATCGGTTTGAAGCCGC ACAGCAAACAGAGAAGGCTCTTGAGAAGGAAATCAACAACCTCCGAGAAC ATGCACGTGAGCAAGCACCTTACCTTAAATCACGGGCTACATCTTATTAA TCTTTCCTCAATCGCATAAATCTTCACGCGCAAGTGCTCGCCCACACATT GCAGGCCGGGCTGCTGAAGCGCAGGCAGCCGCTGCTGCTGAAGCGCAGGC AGTCGCTGCTGCTGAAGCGCAGGCAGCTGCTGCTGCTGAAGCGCAGGCAG TCGCTGCTGCTGAAGCGCAGGCAGTCGCTGCCGCTGAAGCGCGGGAAGCC GCTGAAGTGCAGGCAGCCGCTGCCGCCGCTGCTCAAGCTTCAGCTTCTCG AGCCAAGGACAGCCCCGTGGCTGCCTCTAGCTACATTATCCCAAATGAAT ACCCTGCCAACCGTACCTTCACTGGGGTGCGTCGACTGGACACTCACGTG GAGCGCCTTTCCATCCAAAGCCCGGGGCTTGCTGGCAAGATCACTGAAGG CAATTCGACTGCAACCTACTCGACGCTAAATGTTCGTCCCAACCCTGACC CTGACGTGACCCAGTCAACGAGTTCCTTCACCTGTGCCGCGGTTTCCATT AGAAGCACGGGGGTTTACCCACTTCGTTCAAGTAGTGGCAAACAGGAGCG CGGGTCCAATGATGACCAGCAGGTGGGCCATGCATCGAATGCCTTTTGAC CTTGTATGCCGAGCCGGTCGGCGCTAGTTATTGAGGCCAAGAATAGTCGC GCTTGAAAGTAGGGTGTAAGGGGTACTGTTTTGATGGGTTCAAAATTAGG GCAAAACATGTAAGAGCAGTCACTAAAGCTTAATCGCGTAAGAGCCACGC TCTCGGACCTGCAAGAGGCCGCAACTTCTCGTCGAACCATCCCCCCATAC CCCCGTCAATAATGATCCAACTTCGTCAGGTGACTACCACAGTAATGAAA TGTGCCCCTAGCCGTGGCCATTCTGATCGCCGATCCCACAAATCACCTGG GCGTTCCAGCAAATTCAGCCGTTCATATTCTAGAGATGCTACGCGAAGCC AACAAGCATCAGAGAGTACTGCAGAGGCAGCCGAGGTGAGGAGCAGTTTG GAGCCCGAAGCGTTGAATTATAAAACAATCAACAAGTATTCGTTTGTCCG TACATCGCCTTGGCAAACTTTGAGGCACGAGAGTTTGAGGTTTAGGTTAA CAACCCCGACCTTCATGACCAAAGGAAACACTTTATTCCGAAGACTATCT TCGCAAGATTTCATGTTATCTCTGGCACACCTCATACTTCATCTGCCCCA TATAGTGTAGGCTGCCGAAATATGACGTCCGTATTTCTTATAATCATCAC AAGGTCCAGACCCACTAGGACTCAAAGAGAATATATTCCGAGTTACCAGC AGCGTTGGTTGTACGGAGGATGCGCTCATAAAAAACATTTTTCTGAATTG TTAGTTGTTCACCATGTATTTTGTACCTCTCCATCCGCCCATTTCGATAC TTCTTTCTTGCTAATCCTAAAGAGTCGCGATACGAACACGTCTGAGGGTA AGTATGGCACAACCAACGGAAGCAATAGTGGCCGTGGTAGCAGGCACAAG AAGGATAAGCCATTATCTAGGACGTCGTCGAAGTCCGTCAACCACCCCGA TGGCGGACACAAGCGCTCTAGCAGGAGGAAAGGCGATGATACCAGTCGCG GTCGCCAAGGCATTGACTCGTCCAGGAAGGGAAGGCCGAGGTCAAAAAGT GGATCGCCGCGCAGCCTTCCTAGGTCTCCGCGTCCGGCCGACAAGGAGTA CGATCTTTGGACCGACAATAGCCTCGTCGGTGACTCCGACTTCAGCTTTT TCTGA
back to top

Coding sequence (CDS) from alignment at F-serratus_M_contig88:804806..812510-

>mRNA_F-serratus_M_contig88.20182.1 ID=mRNA_F-serratus_M_contig88.20182.1|Name=mRNA_F-serratus_M_contig88.20182.1|organism=Fucus serratus male|type=CDS|length=5904bp|location=Sequence derived from alignment at F-serratus_M_contig88:804806..812510- (Fucus serratus male)
ATGTCGTGCATCACCGTACCCAAGAAATGGGGTGGGTCGACAGCACCAAG
AATCGAGACGATGACACCCGTAGTTCCGGTCGCGACGGCCCATAAGCGCT
TGACAAAGAAGGCTCGTGGATCGCCACAGCTTGTTGACACCATGCGGGAG
GTTGTGCAGGCCTTCGAACTAGAGTTTGTCCAGATGTCGTGCATCACCGT
ACCCAAGAAATGGGGTGGGTCGACAGCACCAAGAATCGAGACGATGACAC
CCGTAGTTCCGGTCGCGACGGCCCATAAGCGCTTGACAAAGAAGGCTCGT
GGATCGCCACAGCTTGTTGACACCATGCGGGAGGTTGTGCAGGCCTTCGA
ACTAGAGTTTGTCCAGGTCCGAGCGGCGGCGGTGGAGCTGAAGGCGGTGC
TGGACGATCGTCGTACTCAACTTGTCGACCTTAGGCAGCATCTAGAGAAA
GAATCTGGCGACAATGGCATCCTCGAGGCAGTGGTACAGCACCGCAGCTC
CAAGAATGAGTTCAGCGACAAGCGCCTGGCCGAGCTCGAGCATGAGTTCT
GTGAGATTCTTGAGAACGATCGCATCGTCGCGGTACGGATAGCCGGGCTG
GAATCAGACGTGGGCGTGTTCACGGACGAGTACCGGCGCATTCAAGAAAA
TACAAGCGTGGTTTTATCTCAGCTGACTCGAGCTGAAGCTGCTCTTGAAG
AAAGGGAACGTGCGTTCGCTCTAGGGCTGCGAGAGGGTGAAAGACTGAGC
TCTGAGTTACAGGAGACTCGTCGCAAGTTGGAAGATCTTCAAAGCAAGAC
AGAGAAAGCCCATGAGAAGGCTTCCAGAATGAAGTCCTTGGCTAGCGATG
CTGCGAGGGACCTCAAAGCGTTGGAGGAGCAAGTGGCTCTCTTGCGAAGC
GATGTTGACGCGAAAGAGTCTGATATGTCGGTGGTTGCTTTCACCGCGGC
TTCAACCGAGAGAAAGGCAGACGAGGTCCGAGCGGCGGCGGTGGAGCTGA
AGGCGGTGCTGGACGATCGTCGTACTCAACTTGTCGACCTTAGGCAGCAT
CTAGAGAAAGAATCTGGCGACAATGGCATCCTCGAGGCAGTGGTACAGCA
CCGCAGCTCCAAGAATGAGTTCAGCGACAAGCGCCTGGCCGAGCTCGAGC
ATGAGTTCTGTGAGATTCTTGAGAACGATCGCATCGTCGCGGTACGGATA
GCCGGGCTGGAATCAGACGTGGGCGTGTTCACGGACGAGTACCGGCGCAT
TCAAGAAAATACAAGCGTGGTTTTATCTCAGCTGACTCGAGCTGAAGCTG
CTCTTGAAGAAAGGGAACGTGCGTTCGCTCTAGGGCTGCGAGAGGGTGAA
AGACTGAGCTCTGAGTTACAGGAGACTCGTCGCAAGTTGGAAGATCTTCA
AAGCAAGACAGAGAAAGCCCATGAGAAGGCTTCCAGAATGAAGTCCTTGG
CTAGCGATGCTGCGAGGGACCTCAAAGCGTTGGAGGAGCAAGTGGCTCTC
TTGCGAAGCGATGTTGACGCGAAAGAGTCTGATATGTCGGTGGTTGCTTT
CACCGCGGCTTCAACCGAGAGAAAGGCAGACGAGACCAAAGGCATGATCC
GCGAGGACCGTGCGATCCACACGCAAAGGCTTCGAGATTCACAAGATCGC
CTGGTCAATATCAAGCGACTGGTGGAGGACAAGGAGAACGCTCACGTCGA
GTTAGAGGGTCGAATTCAGGCGCTGCAATTAGCTGTCGCTGCAGAGTCCG
AGGCCCAAGATACTAAGCGCAGCGAAATTGAGGCCATGCGCACGAACCAA
AGGCATGATCCGCGAGGACCGTGCGATCCACACGCAAAGGCTTCGAGATT
CACAAGATCGCCTGGTCAATATCAAGCGACTGGTGGAGGACAAGGAGAAC
GCTCACGTCGAGTTAGAGGGTCGAATTCAGGCGCTGCAATTAGCTGTCGC
TGCAGAGTCCGAGGCCCAAGATACTAAGCGCAGCGAAATTGAGGCCATGC
GCACGAATTTATCTTCCCCAAATAAGCAGGAATCAGTGGAGGTCAAGATG
CGCGACATCTCAGCTCAGATTAAGGTCGTTGAGGCTGAGGTGGCGCAAAG
AGAGGAAGCGGTGACGACAGCGTCTGAGCGCATGCAAGAGGCAAACAAGG
AGTTCAGCAACCTCATGGCTGCCATGTCGGCGGCATTTTGCGAGTACGAC
CAGGCTGTCACTTCGAACCGTGAATTGACAAGTGAAACCGAAAAGACCGC
GAGTGCGCTTTCGACACTTCGCGAGCGTAGTCAGCAGGACCTGATCGCCA
TGCGTGAAGTTAGCAACAAATTGACTGCCTCTAACGAAGAGAACAGGGCG
ACTGCCGAAGCCGACCGGAAGCTCGCGATGGCGCTCGTCGAGACAATCCA
CGAAACGCAGAAAACTGTCGATGGCATGATCTTGGAACTGGAGACGAGGC
GAGAGATGATCACAACGGGCCGAAGCAGACTGGAGGAGGGTTGCGCAAGA
AAGCGCGCGCAGGACGAGGAACGAGCGGAACGAATGCGAGCTGCGAAGGA
GGCTTTTGCAGTGGCGCAGCAAAAATTGCTTCATGTTCGAGGTCAACTCG
AACAGAGACAGATTTATCTTCCCCAAATAAGCAGGAATCAGTGGAGGTCA
AGATGCGCGACATCTCAGCTCAGATTAAGGTCGTTGAGGCTGAGGTGGCG
CAAAGAGAGGAAGCGGTGACGACAGCGTCTGAGCGCATGCAAGAGGCAAA
CAAGGAGTTCAGCAACCTCATGGCTGCCATGTCGGCGGCATTTTGCGAGT
ACGACCAGGCTGTCACTTCGAACCGTGAATTGACAAGTGAAACCGAAAAG
ACCGCGAGTGCGCTTTCGACACTTCGCGAGCGTAGTCAGCAGGACCTGAT
CGCCATGCGTGAAGTTAGCAACAAATTGACTGCCTCTAACGAAGAGAACA
GGGCGACTGCCGAAGCCGACCGGAAGCTCGCGATGGCGCTCGTCGAGACA
ATCCACGAAACGCAGAAAACTGTCGATGGCATGATCTTGGAACTGGAGAC
GAGGCGAGAGATGATCACAACGGGCCGAAGCAGACTGGAGGAGGGTTGCG
CAAGAAAGCGCGCGCAGGACGAGGAACGAGCGGAACGAATGCGAGCTGCG
AAGGAGGCTTTTGCAGTGGCGCAGCAAAAATTGCTTCATGTTCGAGGTCA
ACTCGAACAGAGACAGTCGGAGCTCGTCAAATTTCGCCAACAAGCGGGGG
ACCGGATTTGCGCACCTGCGAGGCTTAACGAGGGCGACCTACAGCACGCA
GAAGAGGAGGCCAGAAAAACGGTTGAAAAAATACGCGCGAATGAAACCAA
GGCGCACGTTGCTCACCTTCACAGCCTCAAAAGTACGCTCGCTACCATCC
GCGAGGGAGGTGCTGCGCGGTTGAAAGCCGAGAAGGACGCCGCGAGATCG
GAGCTCGTCAAATTTCGCCAACAAGCGGGGGACCGGATTTGCGCACCTGC
GAGGCTTAACGAGGGCGACCTACAGCACGCAGAAGAGGAGGCCAGAAAAA
CGGTTGAAAAAATACGCGCGAATGAAACCAAGGCGCACGTTGCTCACCTT
CACAGCCTCAAAAGTACGCTCGCTACCATCCGCGAGGGAGGTGCTGCGCG
GTTGAAAGCCGAGAAGGACGCCGCGAGAGCTCGCGTGACGGCCCTACAAA
ATCAAAAGCGGGAGGTGCTGCAGTCTATAATGGAGCTCCGTGATCGGTTT
GAAGCCGCACAGCAAACAGAGAAGGCTCTTGAGAAGGAAATCAACAACCT
CCGAGAACATGCACGCTCGCGTGACGGCCCTACAAAATCAAAAGCGGGAG
GTGCTGCAGTCTATAATGGAGCTCCGTGATCGGTTTGAAGCCGCACAGCA
AACAGAGAAGGCTCTTGAGAAGGAAATCAACAACCTCCGAGAACATGCAC
GCCGGGCTGCTGAAGCGCAGGCAGCCGCTGCTGCTGAAGCGCAGGCAGTC
GCTGCTGCTGAAGCGCAGGCAGCTGCTGCTGCTGAAGCGCAGGCAGTCGC
TGCTGCTGAAGCGCAGGCAGTCGCTGCCGCTGAAGCGCGGGAAGCCGCTG
AAGTGCAGGCAGCCGCTGCCGCCGCTGCTCAAGCTTCAGCTTCTCGAGCC
AAGGACAGCCCCGTGGCTGCCTCTAGCTACATTATCCCAAATGAATACCC
TGCCAACCGTACCTTCACTGGGGTGCGTCGACTGGACACTCACGTGGAGC
GCCTTTCCATCCAAAGCCCGGGGCTTGCTGGCAAGATCACTGAAGGCAAT
TCGACTGCAACCTACTCGACGCTAAATGTTCGTCCCAACCCTGACCCTGA
CGCCGGGCTGCTGAAGCGCAGGCAGCCGCTGCTGCTGAAGCGCAGGCAGT
CGCTGCTGCTGAAGCGCAGGCAGCTGCTGCTGCTGAAGCGCAGGCAGTCG
CTGCTGCTGAAGCGCAGGCAGTCGCTGCCGCTGAAGCGCGGGAAGCCGCT
GAAGTGCAGGCAGCCGCTGCCGCCGCTGCTCAAGCTTCAGCTTCTCGAGC
CAAGGACAGCCCCGTGGCTGCCTCTAGCTACATTATCCCAAATGAATACC
CTGCCAACCGTACCTTCACTGGGGTGCGTCGACTGGACACTCACGTGGAG
CGCCTTTCCATCCAAAGCCCGGGGCTTGCTGGCAAGATCACTGAAGGCAA
TTCGACTGCAACCTACTCGACGCTAAATGTTCGTCCCAACCCTGACCCTG
ACAGCCACGCTCTCGGACCTGCAAGAGGCCGCAACTTCTCGTCGAACCAT
CCCCCCATACCCCCGTCAATAATGATCCAACTTCGTCAGGTGACTACCAC
AGTAATGAAATGTGCCCCTAGCCGTGGCCATTCTGATCGCCGATCCCACA
AATCACCTGGGCGTTCCAGCAAATTCAGCCGTTCATATTCTAGAGATGCT
ACGCGAAGCCAACAAGCATCAGAGAGTACTGCAGAGGCAGCCGAGAGCCA
CGCTCTCGGACCTGCAAGAGGCCGCAACTTCTCGTCGAACCATCCCCCCA
TACCCCCGTCAATAATGATCCAACTTCGTCAGGTGACTACCACAGTAATG
AAATGTGCCCCTAGCCGTGGCCATTCTGATCGCCGATCCCACAAATCACC
TGGGCGTTCCAGCAAATTCAGCCGTTCATATTCTAGAGATGCTACGCGAA
GCCAACAAGCATCAGAGAGTACTGCAGAGGCAGCCGAGAGTCGCGATACG
AACACGTCTGAGGGTAAGTATGGCACAACCAACGGAAGCAATAGTGGCCG
TGGTAGCAGGCACAAGAAGGATAAGCCATTATCTAGGACGTCGTCGAAGT
CCGTCAACCACCCCGATGGCGGACACAAGCGCTCTAGCAGGAGGAAAGGC
GATGATACCAGTCGCGGTCGCCAAGGCATTGACTCGTCCAGGAAGGGAAG
GCCGAGGTCAAAAAGTGGATCGCCGCGCAGCCTTCCTAGGTCTCCGCGTC
CGGCCGACAAGGAGTACGATCTTTGGACCGACAATAGCCTCGTCGGTGAC
TCCGACTTCAGCTTTTTCTGAAGTCGCGATACGAACACGTCTGAGGGTAA
GTATGGCACAACCAACGGAAGCAATAGTGGCCGTGGTAGCAGGCACAAGA
AGGATAAGCCATTATCTAGGACGTCGTCGAAGTCCGTCAACCACCCCGAT
GGCGGACACAAGCGCTCTAGCAGGAGGAAAGGCGATGATACCAGTCGCGG
TCGCCAAGGCATTGACTCGTCCAGGAAGGGAAGGCCGAGGTCAAAAAGTG
GATCGCCGCGCAGCCTTCCTAGGTCTCCGCGTCCGGCCGACAAGGAGTAC
GATCTTTGGACCGACAATAGCCTCGTCGGTGACTCCGACTTCAGCTTTTT
CTGA
back to top