mRNA_F-serratus_M_contig88.20176.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig88.20176.1 vs. uniprot
Match: D7FV50_ECTSI (PX domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV50_ECTSI) HSP 1 Score: 320 bits (819), Expect = 3.320e-98 Identity = 229/471 (48.62%), Postives = 267/471 (56.69%), Query Frame = 1
Query: 1 GGMLESLGGFLGIRKGSADS------------------MDKEIKR-GKMKRSSRTEA-NKAATRSANAG----GKLGSKVLQRLRKSSDGEGKVVRTGSFRLKVPRAGARKAQGA---------DTREPPPRAT-RRDEREVLTMHSHGVRRPEGLKLRVVKASGRTLEETKFHMEIRTLRPGQVWSVCRRLEDFQKLHACLQRRFPALALPRLPRSPSGAG--VLDPATLERTRAGLQSYATAIVADVPVAWGLEEFVMFLDSDEKGRRLFGKKRKKETRKVTGRSPAPEKQDSKSSREAGTRFSAFESPSRGSAHEEHT---KVRLCGANVPDIGVLNGGAPGNKTIRQTLLDFKVEEKKKAMAELEGEAQNHFEGVGAVINNDVSFSDD-DDDEDLGFDDDGEFIDGGKRFREAIRAMLDRDAKEIEDDNLFNIPAGTDFGAPLDDD-------DDFGDDDFDIDCHG 1272
GGMLESLGGFLGI +G + K+ GK KR+ R+ A N A R ++ G GK+GS V RLR S +G R G+ +++ P +G D R RRDEREV+TMH+ GV RPEG+KLRVVKASGRTLE+TKFHMEIRTLRPGQVWSVCRR +DFQ LH+CLQ FPAL LPRLPR P+G G L+PATLER RAGLQ+YA A+V VP AWGLEE VMFLDS+EKGRRLF R A PD+ G PG +++LLD KVEEKK A+A LEG A NHF+GVGAV+N VSFS+D DDD F ++ +FIDG +AIRAMLDRDA E EDDNLF+IPAGTDFG PLDD D D FDI HG
Sbjct: 326 GGMLESLGGFLGIGRGGDGTPWATGAVGGXXXXXXXXXXGKDAAGWGKSKRAGRSNAGNNHAARGSSIGPVGEGKIGSNVFSRLRNRST-DGTHSRYGNVKVRAPSSGXXXXXXXXXXXXXXXEDEYAQRSRVLLRRDEREVVTMHTPGVLRPEGVKLRVVKASGRTLEDTKFHMEIRTLRPGQVWSVCRRYKDFQSLHSCLQATFPALVLPRLPRPPTGGGGMALEPATLERARAGLQAYAAAVVGSVPAAWGLEELVMFLDSEEKGRRLFSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFKPVARKAAAFPPDLVSPKAGTPGVGFGQKSLLDLKVEEKKLALAALEGAAANHFDGVGAVMNAAVSFSEDSDDDASQEFGEESDFIDG----EDAIRAMLDRDADEAEDDNLFSIPAGTDFGIPLDDXXXXXXXXQDCSADAFDITYHG 791
BLAST of mRNA_F-serratus_M_contig88.20176.1 vs. uniprot
Match: A0A6H5JIG0_9PHAE (PX domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIG0_9PHAE) HSP 1 Score: 285 bits (728), Expect = 3.920e-90 Identity = 179/326 (54.91%), Postives = 202/326 (61.96%), Query Frame = 1
Query: 331 MHSHGVRRPEGLKLRVVKASGRTLEETKFHMEIRTLRPGQVWSVCRRLEDFQKLHACLQRRFPALALPRLPRSPSGAG--VLDPATLERTRAGLQSYATAIVADVPVAWGLEEFVMFLDSDEKGRRLFGKKRKKETRKVTGRSPAPEKQDSKSSREAGTRFSAFESPSRGSAHEEHTK----VRLCGANVPDIGVLNGGAPGNKTIRQTLLDFKVEEKKKAMAELEGEAQNHFEGVGAVINNDVSFSDDDDD-EDLGFDDDGEFIDGGKRFREAIRAMLDRDAKEIEDDNLFNIPAGTDFGAPLDDD-----DDFGDDDFDIDCHG 1272
MH+ GV RPEG+KLRVVKASGRTLE+TKFHMEIRTLRPGQVWSVCRR +DFQ LH+CLQ FPAL LPRLPR P+G G L+PATLER RAGLQ+YA A+V VP AWGLEE VMFLDS+EKGRRLF R A PD+ G PG +++LLD KVEEKK A+A LEG A NHF+GVGAV+N VSFS+D DD F ++ +FIDG +AIRAMLDRDA E EDDNLF+IPAGTDFG PLDD D D FDI HG
Sbjct: 1 MHTPGVLRPEGVKLRVVKASGRTLEDTKFHMEIRTLRPGQVWSVCRRYKDFQSLHSCLQATFPALVLPRLPRPPTGGGGMALEPATLERARAGLQAYAAAVVGSVPAAWGLEELVMFLDSEEKGRRLFSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYKPVARKGAAFPPDLVSPKTGTPGVGFGQKSLLDLKVEEKKLALAALEGAAANHFDGVGAVMNAAVSFSEDSDDGASQEFGEESDFIDG----EDAIRAMLDRDADEAEDDNLFSIPAGTDFGIPLDDXXXXXXQDCSADAFDITYHG 322 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig88.20176.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig88.20176.1 >prot_F-serratus_M_contig88.20176.1 ID=prot_F-serratus_M_contig88.20176.1|Name=mRNA_F-serratus_M_contig88.20176.1|organism=Fucus serratus male|type=polypeptide|length=423bp MLESLGGFLGIRKGSADSMDKEIKRGKMKRSSRTEANKAATRSANAGGKLback to top mRNA from alignment at F-serratus_M_contig88:681637..686017+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig88.20176.1 ID=mRNA_F-serratus_M_contig88.20176.1|Name=mRNA_F-serratus_M_contig88.20176.1|organism=Fucus serratus male|type=mRNA|length=4381bp|location=Sequence derived from alignment at F-serratus_M_contig88:681637..686017+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig88:681637..686017+ >mRNA_F-serratus_M_contig88.20176.1 ID=mRNA_F-serratus_M_contig88.20176.1|Name=mRNA_F-serratus_M_contig88.20176.1|organism=Fucus serratus male|type=CDS|length=2538bp|location=Sequence derived from alignment at F-serratus_M_contig88:681637..686017+ (Fucus serratus male)back to top |