mRNA_F-serratus_M_contig88.20169.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig88.20169.1
Unique NamemRNA_F-serratus_M_contig88.20169.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
[Close]
BLAST of mRNA_F-serratus_M_contig88.20169.1 vs. uniprot
Match: D7FV39_ECTSI (5'-nucleotidase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FV39_ECTSI)

HSP 1 Score: 352 bits (904), Expect = 1.180e-114
Identity = 194/398 (48.74%), Postives = 252/398 (63.32%), Query Frame = 1 
Query:  244 MGPVYASTNASDKIERIRSILRENHGAASSDGIQVIMDFDLTMTAPGSQQCHHMFETSSTLPEELRCRLTPYLNGQIKVSSPEEWWETFHGLLVDGRLTREQVVLVARGASVTLREGTAELMLLLRDLGVPLLIASAGISDIIEETLRRHGLLLENVTIRANTMVFGEDGTLKSFRESPPIHSRNKKQMAEWESEYFESHAARRCVLVVGDKPGDADMSHGVAPEERCLKIGFFDHSREHPHPDLPPLPPPLSLPAVSAGRDGSHPDG--AGHAYAWGGGFELEKEDHRNLLARLAEGASSAIWPPSLAGDRGSTDLMMAPERRRAHGK-------EPFWQDSG----------LCLATTQMLLAYWDSFDVVARDGHSMGLVTGVLRHVIGDSGDRA 1380
            MGP++ S     K+E IR+ LRE H   +  G+QVIMDFDLTMTAPGS+QCHHMFETS  LPE+LR RL P+  G+I++++ E WWE FH +L+D ++T+ QV  VA GA + LR+GTAELMLLL++ GVPLL+ SAGI+DI+ ETL R+GLLL+NVT+RANTM FGEDG L+ FRES P+HSRNK + AE E  YF+S + RR +L+VGDKPGDAD++ G AP+++CLKIGFFDHS E    DLPPLP P ++   SA    +      AG   A   G    +  +R +L        S     +     G+  L  + E+ R  G+       E F  + G                ++L AY D FDVVA  GHSM LVT  +RH +GD G+ A
Sbjct:    1 MGPIHGSAAVGAKVESIRTALRELHDHPAH-GLQVIMDFDLTMTAPGSEQCHHMFETSPALPEKLRRRLAPFFTGEIELTTREAWWEGFHDVLIDAKVTKAQVAAVAGGADLALRDGTAELMLLLQERGVPLLVVSAGITDIVAETLSRNGLLLDNVTVRANTMHFGEDGKLERFRESTPVHSRNKDKTAEREKAYFDSTSHRRRLLIVGDKPGDADVNTGFAPDDQCLKIGFFDHSHEXXXXDLPPLPAPPAVTMSSAAAPVAAASNGLAGETTATLEGLGFLRGANRLMLRTTQSPMESTAAAAAAVQGSGAFQLSTSAEQERIRGRPGSQGGGEIFVSERGQEXXXXXXXETTAVAEELLRAYGDRFDVVACGGHSMDLVTDFVRHFVGDGGNSA 397
[Close]
BLAST of mRNA_F-serratus_M_contig88.20169.1 vs. uniprot
Match: A0A7S2NJK1_9EUKA (5'-nucleotidase n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2NJK1_9EUKA)

HSP 1 Score: 146 bits (368), Expect = 1.080e-36
Identity = 97/274 (35.40%), Postives = 143/274 (52.19%), Query Frame = 1 
Query:  229 WLKTAMGPVYASTNASDKIERIRSILRENHGAASSDGIQVIMDFDLTMTAPGSQQCHHMFETSSTLPEELRCRLTPYLNGQIKVSSPE----EWWETFHGLLVD-GRLTREQVVLVARGASVTLREGTAELMLLLRDLGVPLLIASAGISDIIEETLRRHGLLLENVTIRANTMVFGEDGTLKSFRESPPIHSRNKKQMAEWESEYFESHAARRCVLVVGDKPGDADMSHGVAPEERCLKIGFFDHSREHPHPDLPPLPPPLSLPAVSAGRDGS 1035
            W+ T  G    + +A +     R I +      + + + +I DFD T+T+  SQQCH +F  S  + +  R +  P L+     ++P+    EWW+  H L+V  G   R+ +  + R A++  R G  E++    +LG+P+LI SAGISD+IEE LR+HG L ENVT+ +N + +  D T KS   SPPI S  K       S +F  HA RR +LV+GD   D D S  V P ++ L +GF +       PD   +P   +  AV  G DGS
Sbjct:    1 WVATERGRKKTAWHAMEGWISKRPIFK----FVNPEKLMLITDFDATITSGDSQQCHDLFGESKLMSQAFRSQFAPLLDW---AANPDIDGVEWWDRAHALMVQYGMPPRQLIPRLVREANMIPRPGALEMLKRCDELGIPVLIVSAGISDVIEEFLRQHGALTENVTVCSNRLNYAGDSTPKSTSPSPPITSFTKSYAYSSASGFFSGHAERRYLLVLGDSVTDVDASQNV-PHDQSLSVGFLNS-----RPDG--VPHAKAFDAVVLGNDGS 259
[Close]
BLAST of mRNA_F-serratus_M_contig88.20169.1 vs. uniprot
Match: A0A0M0JA97_9EUKA (5'-nucleotidase n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JA97_9EUKA)

HSP 1 Score: 138 bits (348), Expect = 1.560e-33
Identity = 80/219 (36.53%), Postives = 120/219 (54.79%), Query Frame = 1 
Query:  307 RENHGAASSDGIQVIMDFDLTMTAPGSQQCHHMFETSSTLPEELRCRLTPYLNGQIKVSSPE----EWWETFHGLLVDGRLTREQVV-LVARGASVTLREGTAELMLLLRDLGVPLLIASAGISDIIEETLRRHGLLLENVTIRANTMVFGEDGTLKSFRESPPIHSRNKKQMAEWESEYFESHAARRCVLVVGDKPGDADMSHGVAPEERCLKIGFFD 948
            R       +  + +I DFD T+T   S+QCH +   S  +P + R +  P L+     ++P+    EWW+  H L+V   + + Q++  + R   +T R G  EL+  L++L +P+LI SAG+SD+IEE LR+HG L ENVT+ +N + +  D T KS    PPI S  K       S +FE HA R+ ++V+GD   D D S  V P E  L +GF +
Sbjct:   43 RSKFSFVRAQNLLLITDFDATLTTGDSEQCHDLCGFSHVMPADFRSKFAPLLDW---AANPDIDGVEWWDRAHSLMVQYGVPKRQLIPRLVREGKMTPRPGALELLRRLQELDIPVLIVSAGLSDVIEEWLRQHGALSENVTVCSNRLNYAADMTPKSVSPEPPITSFTKAYAYSSASSFFEQHATRKHLIVLGDSVTDVDASKHV-PYEDFLSVGFLN 257
[Close]
BLAST of mRNA_F-serratus_M_contig88.20169.1 vs. uniprot
Match: A0A8C9SFH3_SCLFO (5'-nucleotidase n=2 Tax=Scleropages formosus TaxID=113540 RepID=A0A8C9SFH3_SCLFO)

HSP 1 Score: 130 bits (327), Expect = 6.770e-31
Identity = 84/241 (34.85%), Postives = 130/241 (53.94%), Query Frame = 1 
Query:  289 RIRSILRENHGAASSDGIQVIMDFDLTMT-----APGSQQCHHMFETSSTLPEELRCRLTPYLNG----QIKVSSPEE--------WWETFHGLLVDGRLTREQVVLVARGASVTLREGTAELMLLLRDLGVPLLIASAGISDIIEETLRRHGLLLENVTIRANTMVFGEDGTLKSFRESPPIHSRNKKQMAEWESEYFESHAARRCVLVVGDKPGDADMSHGVAPEERCLKIGFFDHSRE 960
            R++ I+     A  S  IQVI DFD+T+T           CH++ + S  + EE + +L   L+     +I VS P E        WW   H LL++ ++ ++++ +V R +   LR+G       L++ GVPLLI SAGI D++EE +++ G+   NV + +N M F E GTL++F+    IH+ NK++ A   +E F+    R  VL++GD  GD  M+ GV   E  LKIGF +   E
Sbjct:   17 RVQEIIESMRRAGPST-IQVISDFDMTLTRFAYNGKRCPTCHNILDNSKLINEECKIKLAELLDRYYPIEIDVSRPMEEKLPLMVEWWTKAHDLLIEQKIQKDRLAVVVRESDAMLRDGYKLFFDHLQEKGVPLLIFSAGIGDVLEEVIQQAGVFHPNVKVISNYMDFDETGTLQAFK-GELIHTYNKREGALLNTELFQELRTRPNVLLLGDSLGDLTMADGVHSMENILKIGFLNDKVE 255
[Close]
BLAST of mRNA_F-serratus_M_contig88.20169.1 vs. uniprot
Match: A0A7J7IV63_BUGNE (5'-nucleotidase n=1 Tax=Bugula neritina TaxID=10212 RepID=A0A7J7IV63_BUGNE)

HSP 1 Score: 128 bits (321), Expect = 1.640e-29
Identity = 77/234 (32.91%), Postives = 118/234 (50.43%), Query Frame = 1 
Query:  310 ENHGAASSDGIQVIMDFDLTMT-----APGSQQCHHMFETSSTLPEELR------------CRLTPYLNGQIKVSSPEEWWETFHGLLVDGRLTREQVVLVARGASVTLREGTAELMLLLRDLGVPLLIASAGISDIIEETLRRHGLLLENVTIRANTMVFGEDGTLKSFRESPPIHSRNKKQMAEWESEYFESHAARRCVLVVGDKPGDADMSHGVAPEERCLKIGFFDHSRE 960
            +NH     D +Q+I DFD TMT           CH + ET   LP+  R                P+L  + K+    EWW     LL+   + R  +    + +++ LREG+++L+  L +  +PLL+ SAGI D+IE+  R+   L +N+ I +N M F  +G L  F+    IH  NK   A   + YF+S   R  V+++GD  GD D+  G++ E+R LKIG+ +H  E
Sbjct:   82 DNHIQGGPDKLQIIADFDATMTPMTYRGKSVPSCHELIETFPRLPDWYREKAAKIKDYYMAIEFDPHLTKEEKLPFMVEWWSKARELLISCSVVRSDIEAAIKSSNLYLREGSSKLLGKLYESDIPLLVFSAGIGDVIEQLFRQRYKLYDNIHIISNWMEFNHEGMLVGFK-GETIHVFNKNTHALSNASYFDSLRHRHNVILLGDSLGDLDIIEGLSTEDRTLKIGYLNHHVE 314
[Close]
BLAST of mRNA_F-serratus_M_contig88.20169.1 vs. uniprot
Match: A0A665TGL5_ECHNA (5'-nucleotidase n=3 Tax=Echeneis naucrates TaxID=173247 RepID=A0A665TGL5_ECHNA)

HSP 1 Score: 126 bits (316), Expect = 3.130e-29
Identity = 84/242 (34.71%), Postives = 128/242 (52.89%), Query Frame = 1 
Query:  286 ERIRSILRENHGAASSDGIQVIMDFDLTMT-----APGSQQCHHMFETSSTLPEELRCRLTPYLNG----QIKVSSPE--------EWWETFHGLLVDGRLTREQVVLVARGASVTLREGTAELMLLLRDLGVPLLIASAGISDIIEETLRRHGLLLENVTIRANTMVFGEDGTLKSFRESPPIHSRNKKQMAEWESEYFESHAARRCVLVVGDKPGDADMSHGVAPEERCLKIGFFDHSRE 960
            +R++ I+ E+   A S+ +QVI DFD+T+T           CH++ + S  + EE + +L   L+     +I  S P         EWW   H LLV  R+ ++ + LV R +   LR+G       L +  +PLLI SAGI DI+EE +R+  +   N+ + +N M F + G L++F+    IH  NK++ A   S +FE   AR  VL++GD  GD +M+ GV   E  LKIGF +   E
Sbjct:   28 QRVQDIM-ESMAKAGSNTVQVISDFDMTLTRFAYNGKRCPTCHNILDNSDLVSEECKEQLKELLDTYYPIEIDCSRPVDEKLPLMVEWWTKAHALLVQQRIKKDHLALVVRESDAMLRDGYQLFFDHLHEHSIPLLIFSAGIGDILEEVIRQAKVFHPNINVFSNYMDFDDCGVLRAFK-GELIHIYNKREGALLNSGHFEELRARPNVLLMGDSLGDLNMADGVQDMENILKIGFLNDKVE 267
[Close]
BLAST of mRNA_F-serratus_M_contig88.20169.1 vs. uniprot
Match: UPI00097D02C0 (cytosolic 5'-nucleotidase 3-like n=3 Tax=Pleuronectoidei TaxID=30942 RepID=UPI00097D02C0)

HSP 1 Score: 125 bits (313), Expect = 6.350e-29
Identity = 81/242 (33.47%), Postives = 127/242 (52.48%), Query Frame = 1 
Query:  286 ERIRSILRENHGAASSDGIQVIMDFDLTMT-----APGSQQCHHMFETSSTLPEELRCRLTPYLNG------------QIKVSSPEEWWETFHGLLVDGRLTREQVVLVARGASVTLREGTAELMLLLRDLGVPLLIASAGISDIIEETLRRHGLLLENVTIRANTMVFGEDGTLKSFRESPPIHSRNKKQMAEWESEYFESHAARRCVLVVGDKPGDADMSHGVAPEERCLKIGFFDHSRE 960
            ER++ IL E+   A S+ +QVI DFD+T+T           CH++ + S  + E+ + +L   LN             ++K+    EWW   H LLV   + ++++ +V R +   LR+G       L +  +PLLI SAGI D++EE +R+ G+   NV + +N M F E G LK+F+    IH  NK++ A   + +F+    R  V+++GD  GD  M+ GV   E  LKIGF +   E
Sbjct:   16 ERVQEIL-ESMMKAGSNTVQVISDFDMTLTRFAHNGKRCPTCHNILDNSMLISEDCKKQLKDLLNKYYPIEIDSSLSIEVKLPLMVEWWTKAHELLVQQEIKKDKLAIVVRESDAMLRDGFQLFFDHLHEHSIPLLIFSAGIGDVLEEVIRQAGVFHPNVKVFSNYMDFDECGVLKAFK-GVLIHIYNKREGALLNTGHFQELRTRPNVVLMGDSLGDLTMADGVQDMENILKIGFLNDKVE 255
[Close]
BLAST of mRNA_F-serratus_M_contig88.20169.1 vs. uniprot
Match: A0A3Q3EFB7_9LABR (5'-nucleotidase n=1 Tax=Labrus bergylta TaxID=56723 RepID=A0A3Q3EFB7_9LABR)

HSP 1 Score: 124 bits (311), Expect = 1.210e-28
Identity = 84/242 (34.71%), Postives = 125/242 (51.65%), Query Frame = 1 
Query:  286 ERIRSILRENHGAASSDGIQVIMDFDLTMT-----APGSQQCHHMFETSSTLPEELRCRLTPYLNGQ--IKVSSPE----------EWWETFHGLLVDGRLTREQVVLVARGASVTLREGTAELMLLLRDLGVPLLIASAGISDIIEETLRRHGLLLENVTIRANTMVFGEDGTLKSFRESPPIHSRNKKQMAEWESEYFESHAARRCVLVVGDKPGDADMSHGVAPEERCLKIGFFDHSRE 960
            +R++ IL E+   A S+ +QVI DFD+T+T           CH++ + S  +  E R +L   LN    I++ S            +WW   H LLV   + ++ + +V R +   LREG       L +  +PLLI SAGI DI+EE +R+ G+   NV + +N M F E G LK+F+    IH  NK++ A   + +F+    R  VL++GD  GD  M+ GV   E  LKIGF +   E
Sbjct:   16 QRVQEIL-ESMMKAGSNTVQVISDFDMTLTRFAYNGKRCPTCHNILDNSKLITNECREKLKELLNTYYPIEIDSARSIEEKLPLMVQWWTKAHELLVQQEIKKDLLAMVVRESDAMLREGYQLFFDHLHEHSIPLLIFSAGIGDILEEVVRQAGVFHSNVKVFSNYMDFDETGVLKAFK-GELIHIYNKREGALLNTGHFQELRTRPNVLLLGDSLGDLTMADGVQDMENILKIGFLNDKVE 255
[Close]
BLAST of mRNA_F-serratus_M_contig88.20169.1 vs. uniprot
Match: A0A3Q3EFA5_9LABR (5'-nucleotidase n=2 Tax=Eupercaria TaxID=1489922 RepID=A0A3Q3EFA5_9LABR)

HSP 1 Score: 124 bits (311), Expect = 1.290e-28
Identity = 84/242 (34.71%), Postives = 125/242 (51.65%), Query Frame = 1 
Query:  286 ERIRSILRENHGAASSDGIQVIMDFDLTMT-----APGSQQCHHMFETSSTLPEELRCRLTPYLNGQ--IKVSSPE----------EWWETFHGLLVDGRLTREQVVLVARGASVTLREGTAELMLLLRDLGVPLLIASAGISDIIEETLRRHGLLLENVTIRANTMVFGEDGTLKSFRESPPIHSRNKKQMAEWESEYFESHAARRCVLVVGDKPGDADMSHGVAPEERCLKIGFFDHSRE 960
            +R++ IL E+   A S+ +QVI DFD+T+T           CH++ + S  +  E R +L   LN    I++ S            +WW   H LLV   + ++ + +V R +   LREG       L +  +PLLI SAGI DI+EE +R+ G+   NV + +N M F E G LK+F+    IH  NK++ A   + +F+    R  VL++GD  GD  M+ GV   E  LKIGF +   E
Sbjct:   19 QRVQEIL-ESMMKAGSNTVQVISDFDMTLTRFAYNGKRCPTCHNILDNSKLITNECREKLKELLNTYYPIEIDSARSIEEKLPLMVQWWTKAHELLVQQEIKKDLLAMVVRESDAMLREGYQLFFDHLHEHSIPLLIFSAGIGDILEEVVRQAGVFHSNVKVFSNYMDFDETGVLKAFK-GELIHIYNKREGALLNTGHFQELRTRPNVLLLGDSLGDLTMADGVQDMENILKIGFLNDKVE 258
[Close]
BLAST of mRNA_F-serratus_M_contig88.20169.1 vs. uniprot
Match: A0A667XX17_9TELE (5'-nucleotidase n=6 Tax=Euacanthomorphacea TaxID=123369 RepID=A0A667XX17_9TELE)

HSP 1 Score: 124 bits (311), Expect = 1.320e-28
Identity = 83/242 (34.30%), Postives = 124/242 (51.24%), Query Frame = 1 
Query:  286 ERIRSILRENHGAASSDGIQVIMDFDLTMT-----APGSQQCHHMFETSSTLPEELRCRLTPYLNG------------QIKVSSPEEWWETFHGLLVDGRLTREQVVLVARGASVTLREGTAELMLLLRDLGVPLLIASAGISDIIEETLRRHGLLLENVTIRANTMVFGEDGTLKSFRESPPIHSRNKKQMAEWESEYFESHAARRCVLVVGDKPGDADMSHGVAPEERCLKIGFFDHSRE 960
            +R++ IL+    A S+  IQVI DFD+T+T           CH++ + S  + EE + +L   LN             + K+    EWW   H LLV  ++ ++ + +V R +   LR+G       L    +PLLI SAGI DI+EE +R+ G+   NV + +N M F E G LK+F+    IH  NK++ A   + +F+    R  VL++GD  GD  M+ GV   E  LKIGF +   E
Sbjct:   20 QRVKEILQSMQKAGSNT-IQVISDFDMTLTRFAYNGKRCPTCHNILDNSKLITEECKEKLKDLLNTYYPIEIDCARSIEEKLPLMVEWWTKAHELLVQQKIKKDLLAMVVRESDAMLRDGYQLFFDHLHKHSIPLLIFSAGIGDILEEVIRQAGVFHPNVKVFSNYMDFDETGVLKAFK-GELIHIYNKREGALLNTGHFQELRTRPNVLLLGDSLGDLTMADGVQDMENILKIGFLNDKVE 259
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig88.20169.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FV39_ECTSI1.180e-11448.745'-nucleotidase n=2 Tax=Ectocarpus TaxID=2879 RepI... [more]
A0A7S2NJK1_9EUKA1.080e-3635.405'-nucleotidase n=1 Tax=Haptolina brevifila TaxID=... [more]
A0A0M0JA97_9EUKA1.560e-3336.535'-nucleotidase n=1 Tax=Chrysochromulina tobinii T... [more]
A0A8C9SFH3_SCLFO6.770e-3134.855'-nucleotidase n=2 Tax=Scleropages formosus TaxID... [more]
A0A7J7IV63_BUGNE1.640e-2932.915'-nucleotidase n=1 Tax=Bugula neritina TaxID=1021... [more]
A0A665TGL5_ECHNA3.130e-2934.715'-nucleotidase n=3 Tax=Echeneis naucrates TaxID=1... [more]
UPI00097D02C06.350e-2933.47cytosolic 5'-nucleotidase 3-like n=3 Tax=Pleuronec... [more]
A0A3Q3EFB7_9LABR1.210e-2834.715'-nucleotidase n=1 Tax=Labrus bergylta TaxID=5672... [more]
A0A3Q3EFA5_9LABR1.290e-2834.715'-nucleotidase n=2 Tax=Eupercaria TaxID=1489922 R... [more]
A0A667XX17_9TELE1.320e-2834.305'-nucleotidase n=6 Tax=Euacanthomorphacea TaxID=1... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig88contigF-serratus_M_contig88:607528..622821 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score355.1
Seed ortholog evalue4.9e-95
Seed eggNOG ortholog2880.D7FV39
Preferred nameNT5C3B
KEGG rclassRC00017
KEGG koko:K01081
KEGG ReactionR00183,R00511,R00963,R01126,R01227,R01569,R01664,R01968,R02088,R02102,R02323,R02719,R03346
KEGG Pathwayko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110
Hectar predicted targeting categorysignal peptide
GOsGO:0000215,GO:0000287,GO:0000288,GO:0000291,GO:0000956,GO:0002252,GO:0002376,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005829,GO:0006139,GO:0006152,GO:0006213,GO:0006401,GO:0006402,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006952,GO:0008150,GO:0008152,GO:0008252,GO:0008253,GO:0009056,GO:0009057,GO:0009058,GO:0009116,GO:0009119,GO:0009123,GO:0009125,GO:0009158,GO:0009161,GO:0009164,GO:0009605,GO:0009607,GO:0009615,GO:0009892,GO:0009987,GO:0010468,GO:0010605,GO:0010629,GO:0012505,GO:0016070,GO:0016071,GO:0016311,GO:0016740,GO:0016772,GO:0016773,GO:0016787,GO:0016788,GO:0016791,GO:0017144,GO:0018130,GO:0019222,GO:0019438,GO:0019439,GO:0019637,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0034656,GO:0042278,GO:0042454,GO:0042578,GO:0043167,GO:0043169,GO:0043170,GO:0043207,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043928,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0044271,GO:0044281,GO:0044282,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046085,GO:0046128,GO:0046130,GO:0046135,GO:0046434,GO:0046483,GO:0046700,GO:0046872,GO:0048519,GO:0050789,GO:0050896,GO:0051607,GO:0051704,GO:0051707,GO:0055086,GO:0060255,GO:0065007,GO:0071704,GO:0072521,GO:0072523,GO:0072527,GO:0072529,GO:0090304,GO:0098542,GO:0140098,GO:0140101,GO:1901068,GO:1901069,GO:1901135,GO:1901136,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901575,GO:1901576,GO:1901657,GO:1901658
EggNOG free text desc.Belongs to the pyrimidine 5'-nucleotidase family
EggNOG OGsKOG3128@1,KOG3128@2759
Ec32 ortholog descriptionPyrimidine 5'-nucleotidase, eukaryotic
Ec32 orthologEc-12_005060.1
EC3.1.3.5
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Exons7
Model size1407
Cds size1407
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932565.2446904-CDS-F-serratus_M_contig88:607527..6078721622932565.2446904-CDS-F-serratus_M_contig88:607527..607872Fucus serratus maleCDSF-serratus_M_contig88 607528..607872 +
1690964368.41233-CDS-F-serratus_M_contig88:607527..6078721690964368.41233-CDS-F-serratus_M_contig88:607527..607872Fucus serratus maleCDSF-serratus_M_contig88 607528..607872 +
1622932565.2616456-CDS-F-serratus_M_contig88:618656..6187241622932565.2616456-CDS-F-serratus_M_contig88:618656..618724Fucus serratus maleCDSF-serratus_M_contig88 618657..618724 +
1690964368.4235036-CDS-F-serratus_M_contig88:618656..6187241690964368.4235036-CDS-F-serratus_M_contig88:618656..618724Fucus serratus maleCDSF-serratus_M_contig88 618657..618724 +
1622932565.2837598-CDS-F-serratus_M_contig88:620467..6205311622932565.2837598-CDS-F-serratus_M_contig88:620467..620531Fucus serratus maleCDSF-serratus_M_contig88 620468..620531 +
1690964368.432128-CDS-F-serratus_M_contig88:620467..6205311690964368.432128-CDS-F-serratus_M_contig88:620467..620531Fucus serratus maleCDSF-serratus_M_contig88 620468..620531 +
1622932565.2973585-CDS-F-serratus_M_contig88:620902..6210551622932565.2973585-CDS-F-serratus_M_contig88:620902..621055Fucus serratus maleCDSF-serratus_M_contig88 620903..621055 +
1690964368.4412103-CDS-F-serratus_M_contig88:620902..6210551690964368.4412103-CDS-F-serratus_M_contig88:620902..621055Fucus serratus maleCDSF-serratus_M_contig88 620903..621055 +
1622932565.3489754-CDS-F-serratus_M_contig88:621440..6216041622932565.3489754-CDS-F-serratus_M_contig88:621440..621604Fucus serratus maleCDSF-serratus_M_contig88 621441..621604 +
1690964368.450748-CDS-F-serratus_M_contig88:621440..6216041690964368.450748-CDS-F-serratus_M_contig88:621440..621604Fucus serratus maleCDSF-serratus_M_contig88 621441..621604 +
1622932565.3724782-CDS-F-serratus_M_contig88:621983..6222761622932565.3724782-CDS-F-serratus_M_contig88:621983..622276Fucus serratus maleCDSF-serratus_M_contig88 621984..622276 +
1690964368.4604113-CDS-F-serratus_M_contig88:621983..6222761690964368.4604113-CDS-F-serratus_M_contig88:621983..622276Fucus serratus maleCDSF-serratus_M_contig88 621984..622276 +
1622932565.4365604-CDS-F-serratus_M_contig88:622501..6228211622932565.4365604-CDS-F-serratus_M_contig88:622501..622821Fucus serratus maleCDSF-serratus_M_contig88 622502..622821 +
1690964368.4704905-CDS-F-serratus_M_contig88:622501..6228211690964368.4704905-CDS-F-serratus_M_contig88:622501..622821Fucus serratus maleCDSF-serratus_M_contig88 622502..622821 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig88.20169.1prot_F-serratus_M_contig88.20169.1Fucus serratus malepolypeptideF-serratus_M_contig88 607528..622821 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig88.20169.1

>prot_F-serratus_M_contig88.20169.1 ID=prot_F-serratus_M_contig88.20169.1|Name=mRNA_F-serratus_M_contig88.20169.1|organism=Fucus serratus male|type=polypeptide|length=469bp
MLLCRRLELLLCVLSSTLLNIFALLPESFLYAVSCSQSPIDCWVRRSTLP
AAATCSSRSCCRSNCSHLRKESYTSGWLKTAMGPVYASTNASDKIERIRS
ILRENHGAASSDGIQVIMDFDLTMTAPGSQQCHHMFETSSTLPEELRCRL
TPYLNGQIKVSSPEEWWETFHGLLVDGRLTREQVVLVARGASVTLREGTA
ELMLLLRDLGVPLLIASAGISDIIEETLRRHGLLLENVTIRANTMVFGED
GTLKSFRESPPIHSRNKKQMAEWESEYFESHAARRCVLVVGDKPGDADMS
HGVAPEERCLKIGFFDHSREHPHPDLPPLPPPLSLPAVSAGRDGSHPDGA
GHAYAWGGGFELEKEDHRNLLARLAEGASSAIWPPSLAGDRGSTDLMMAP
ERRRAHGKEPFWQDSGLCLATTQMLLAYWDSFDVVARDGHSMGLVTGVLR
HVIGDSGDRAGSPSKLRD*
back to top

mRNA from alignment at F-serratus_M_contig88:607528..622821+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig88.20169.1 ID=mRNA_F-serratus_M_contig88.20169.1|Name=mRNA_F-serratus_M_contig88.20169.1|organism=Fucus serratus male|type=mRNA|length=15294bp|location=Sequence derived from alignment at F-serratus_M_contig88:607528..622821+ (Fucus serratus male)
ATGCTACTCTGTCGAAGGCTGGAACTGCTACTTTGCGTGTTATCATCCAC
ATTGCTGAACATTTTCGCGTTGTTGCCGGAATCCTTTCTTTACGCCGTCA
GCTGCTCACAAAGTCCAATCGACTGCTGGGTTCGAAGGTCAACGCTGCCA
GCTGCTGCAACTTGCTCCAGCCGAAGCTGCTGCCGCTCCAACTGCAGCCA
CCTCCGTAAAGAAAGCTATACGTCCGGTTGGTTAAAGACAGCAATGGGCC
CCGTCTATGCGTCAACAAATGCCTCTGATAAGATAGAGAGGATTCGGAGT
ATTCTGCGCGAGAATCATGGTGCCGCTTCTTCCGACGGCATTCAGGTAAA
CACGGAAGATGTATGAGTACAACAAGTAGTGCGACATGTAAGGCTCCTTG
TAGTGGTGTATTTTGTTCAATAAAATCAATACACTACGAGTAAGCAAAGT
TGCATCGTCCGATGGCCGATTCGACTTCCACGTAGCAAATCTCCTTTCTG
AAAAGATAGTCCATCCCGGCGGTAGCTCAGTTGGTAACCTCGTAGCCTTC
TGACACGTTGGGACGTGAGTTCGAATCCCGGTAACTGGGATTTTTTCTCT
CAAAAAAATAAAAAAATAAAGGGAATGGCTATTTGCCCCACCGGTGGGCC
ATACCCAAACTTACCCCACCACCTGGATCTCGCGTCAGATAACACGGTTG
GTCACAATACATGCACGGGTGTGTTGGCGCGTTGCAGGGCTATCATGGGG
TCATTCGTGCAGCCCAAACGGCCCTGTCTACGTGATGTTACGGCCGGTGG
GGTGGTTGGTGTTTTCTGGTATGTAAGGGCAAATAGCCTTACATGCCAGA
AAACACCAACCACCCCACCGGCCGTGGTAGCACGTAGACGGGACCGTTTG
GGCTGCACGATAGACCTGATAATAGCTAACCCTAACCCTAACACACCCAT
GCATGTACTGTGACCAACCAAGTCTTCTGACGCGAGATCCAGGTGGGGGG
TAAACAAGAGAATAGCCCACCGGTGGCCCAAATAGCCATACCCATAAATA
AATCATGCCCAACAAGGAGTTAGAGAACAAATAGTTCTTGGGTACACAAA
ATTCGACTTCACGCTCGACGAGGAAAAGAAACGACTGAATCCTTCTCGCT
AGAAAAATGGAGACATATGATGGCCTGGCCGGTGCAACACCGGCGGCGAA
TACGCCCCGGCCAAGTGGGTACAAGGATATAATCATGTGATATTATTATT
GTCTTGGTTGGTGATCCTTGATTATTTTTGTTTGTTTTATTTTGCTTGGC
CTCGCGTGTCGAGTGGGAGCGATGGGCTCTATCTATCCCCTTTGTTCGAC
GTGTCGCCTGCGACGGCTGACTGTCTAGAGCCTTATTTTTCTGGGGGAGG
GAGGTCCTATTATCGCGTGTGTGTTGACTTCTCTGGGTCCTTTTATTCAG
GCCTATGCGTGGTAACGAAGACACACCGTGGGATGGTATTCCATCAAAAT
CCCGCCGCAGGCGGTAATTTTTTTGAGCTTTACCATCACAAAGATGGGAT
GGTAATCACTTTCTTTGATGATGGTAATGCGATGGGATGGGAAACATGAA
GAAATGTATCGATGGGATGGGATGGTAATCGGCGTCGGGTGTAGATGGGA
TGGGATGGTAATGGGAGTCGGGTGCTGCTGGGATGGGATGGTACTTGGAT
TCGGTGTTGATGGGATGGGATGGTATTAGGATTCTGGAGCTGATGGAATG
GTAAGCCCATTTGCCATCACGATGGTGATGGTATTCGGGGGAAGGATGGT
AAAGCGATGGTAAAGTGATAGTAGAGCGATGGGAATGCGATGGGATCATC
ATTACTCCATGATAAAGCAGTGACCGTTCCACTTGCCATCGATAGTAGTG
TCACGCCTATGTCACATGCCACAATCAAACGCCTCTCGTGTGTGTAGAAT
CATACTACTGTACTGTTTATGATGCGTTTTGGTATCATTAATACCTGATT
AATACAAATCAGCTGATACTGTATATAAAAGTGTCCGTGTTAAAATGCCT
GTCGATGGTGTTGCTTGCACTCACAGCATCCATCCGTGCATCCTAGATTC
ACGAACTTGATTGACTTCAAACAACGAAAGCTACGAGTTAGACCCTTTTT
TGCTTTTTTTTCATTCCCTCGATTTATGAAGAACAGTAAAATGGAAAAAT
AATCAATACCACGACACGAATGCAAACTGACTACGCCACGTGCACAAAAT
CACCCTCGCGAGCGTTCTGGGCGGCAACTGATACAGCCGCGTGTACATCA
AACTTCGTCGTCAAGGCTTCCAGCTGCTTCACGACTTCAGCAAAACCAGG
AATGAGGTGCCTATTGAGCCTCAGCAGCAACATCTTCTCGACCTTGTGGG
GAAGGGTGCCGGCTCGCATGTCACTAACGACGTGTTTGAGAGCGGAAAAA
TTCCTCTCAGCTTGACAGCTAGTGGTGTCGACGCCTGCGTACAACCTAGC
CAGCAACCCGATGTGCGGCCAGCGGGCAGGCGCTACAACCTTCCCTGACG
GGTCTATCCCATCTACACTTTGCGTAGCCCAATACTGAAGCAAATCGAAG
TCGGAGTTGTTGGAGGGGGCCGCCTCTTTCATGTACGCGTTAAACTCGCG
CTCTGCGACGTCAGCTCGACTCTCCGGGGCATCCACGTCGCCGGGGGGAC
GGGCGACCTTTTTGTCCCGTTGTGCCTTGCGCCTGTCCATCCTGGAAATG
GGCGCGGTGGATGCGGGCGACCCGGCGCCACCCGCCCTCGAAGCCGCCCC
TGTCCCCGCCGTTTCAGGGCTCCCCGCTACCTTGTATCTTCCACTGCTGT
TGGCACCGGCACCAGAACCTCCGCTGCCGCTGGCACTGGCACCAGGACCT
CCGCTGCTGCTGGCATCGGCACCGGCGCTTCCCCCGCTCGCCACACTGCC
GGTGAAATGAAATAACTTTGCTTCCACAAGAGCGGTGACGCTCTCCCGGA
GTTGCTGTCCCCCGTTCAAACAAACGGCCTCACAGCAGGACTTGTAGCGA
GGGTCAAGCACCAAGCAAATCTTCTCCACCTTGCTCATGGCACGTCCTAA
GCCCCGTGTCTTCATGTCTTTACCCAGGACCTCCAGCAGTGTCTGGACCT
CGGGGAGAAGGTCGTGCACGAGCACGTCCACACGGGGACCGTCGTAAGGA
TCCATACTCCGGATTTCCTGAGTGTCCTCGTTCAACAACTCCGTCAGCAC
GGCAAAGTCGTTGATCGCCTTGCCCACGAAGGCATGGTGCCACCCTTGGT
GTGCTTGAACAGTGCGCCACAAGTCTTAGTGCGTGCAGGCAACACATTTC
CAACAGACGTAGGCAGTTTAATCTTCACGATGCACTTGACGTTCCTTCCT
TTAGAATCGGGCGGTACGAAGAGTTGCATATATCGCCAAATGGAAGACGT
TTGTTTGCGCTTCCCAACACCAGCCCCGACCGCGGTGGTGCCAGCAGCAG
CAGGAGCAGCAGAGAGCGCTGCAGATTGCTGTGTTCCTGCAGAGCTCTCG
CCAATGGTGCCATCTGGTGATGGCGTTGGGGGTGCTGCAGGTGTCTGGTC
GTCTACTGCGACCGGCGTGCCGCTTTGGGGAGCGGGCATCATGCGTGTGC
GTGTTGACAAGCAGAACTGCTCACAACAAAATATTAATTGCTTGCTTGCC
TAGAGGGAGCAGAAAAGACTGAGCTCCCAAGGGGTAGTGCACTTGCTTTC
CAGCTCAAAACAGAAAACATCTACGCAAATAATGCAATAACGGGGATAGA
CCTTATTCTACCCCTAAGTCTCCTAAAGCGGGGAGATTACAGACCAATCA
TCATAACACCTAGGTTCCACGAGTAGTAAGCAGAAAGCAGTGCAAACGCT
ATAGGGGGTAGGGGGCCTGCCTTCCTGGAAATATCCAGGAAAATGATTGC
TGTGCAGTGGTATCGGGGTGACTGAACGTGGGTATGTGGTGGGATGGTTG
AAAGTTCGAGAGGTGGGTTGTAGATGGGATGGGAAGCAACTCCGGGTGGT
GGGATGGTAAAGTCGATGGGATGGTATATGCAGACATACCACCAACTGGC
CATTGATGGGTTGTACAAATCACAGTGATGGTGATGGGATGGTAGCTTGT
GATGGGAACGAAATTCCTCGACCCATCCCATCCCATCCCATTACCATCCC
ATTTGTGATGGTAATACCATCCCATCACATTACCACGCATAGGCCTGCTT
TTATTTCCCTTTTTCTCATAATATGTACCCTTTTGGGGTTGTTAGCCTGT
AACCACGGAAGGCGTTCGCGTCAGTTGGACCAGTACGGATGTTGGAAGGT
ACTGAGCAGAGATCGGAACGTTTTTTAATGTGAAGACAACAACAACAACA
AACAGCAGAAGGAAGATGGATGAGAAATCAGAAATCCTGTGTGGCCTTCC
TCCTGTGTAACCCCGGCTGGTACATCCGACGAACTTGACGTCCAGAATAG
TTTAAATGGGAAGAAAACACAAACACAACACACGTACTGTATAATAATAA
TAAATACTGGAGTACGAAGTAGTAAAATAAAAATCCAGTCCAACCTCGTC
ATTCCTTACTCAAAGAAGTTTTTTTTTCGGGAACGAAGATACTCCGTAGT
CTAATCCTGGTGTAATATCTTCCAGGATTTCCCTCTGTCTTGGCATTTTG
TTATCCAGGAGACAACAACCAACCACAGCCAACTGTGGATTGCCCACCCC
GTACCAGACTATCATACAACTGTTACAGTTGATCAGAACGCACCTAGACC
TTCTGAGCATCCCCCGGTTAGGGGGGATTGTCTTCACAATAAAAACCGTT
CCGATTTCTGCTCAGTACCTTCGACCTCCTAACATCCGTACTTGTCAAAC
TGACACGAACCTCTTCCGTGGTCACAGGCTATCTACCCCAAAAGGGTACC
AGGTACCTGGTACATATTATGAAAAATCAAAGAGAAATAATAGAACCCAG
AAAAGTCGACGCACACGCGATAATGGGGGAAAAAACAGATGAATAAGGCT
CCAGACAGTCAGACGTCGCAGGCGACATGTCGGAGAAGGGAGATATATAG
AGCCCATCGCTCCCACTCGACACGCGAGGCCAAGCAAAATAAAACAAACA
AAAATAATCAAGGATCACCAATCAAGACAATAATAATATCACATAATTAT
ATACTTGTACCCCTACTAGGCCGGGGTGTACAGTATTTACCGCCGGGTTT
GCACCGGCCAGGCCATTCCCTACACATACCTACAAATGTGGGGGGGGGGC
TCAAGATCACGAAAGTCTCGTTTGGTCGCACGTCGTCGGCTGGCCTCCTC
TTCTTCCTTGTGCCAGGATGTCATAATTTTTTCCGCTCCCAGCAACACCC
CCTTGTGCCACGGTGCCCCATCGTCCATCTTCGCTGCAAGGGTCCATACG
ACCCTGTCAACTCCGAATGTAAGCCGGTTGTCCACCGTAGAGCCGTCCGT
GGCTCCGAACGCTTGGAAGTCGTCCTTTGAGACAATCCAGCCAGTTAAAT
TACAGTCTTCACCGCCGGAGAAATCAAAGAGGACTACAAGTACCATACAT
ACATACATACATACATACATACAATGACTCAAAAAAAATGGCAACACTCG
TCCAAGAGCGGGGAAGCAAAAAACGGTCCAATATTTTTTTGATTATTTTT
ATCTCGCGTGCTCTTTCCACGCCACTCTTGACCGAAAAAAAAATTTGCCA
CTCTTCTTGTCCTGCATACAGTATACAGTACATACACGTAGGAGGTCCGA
CTATGGTAGACTTTGGCCTTTATTAATAGCATGGCCGACCTCTAGACCAT
TATAATATTAATAGCTCCATTATTTGAGCTGCTTGCGGTCGGTCAGGATT
GAAGACCGAGAGAGGACCTACTGCTGTTTTCGCTTATTGGAGTGACCTAT
TAATTGTCTAATGTGAGTCAGTCATGTTGAGGAAGTCCGACGAAACAGCC
TCCCGGATGTCCATCGACTACGACGACGTTTTTCGTAGACATCATGTCAT
AATGAGCAATTTTCACTAGAGAAAAGAAAAAGGATCGCATCGACTGAACC
CTACCGAATACGAGTGTATCTTGTCTGTCTCTGTGTGCGTGTATTTATGA
AGTTGTGTAAACCAATACGCAATACGGCCCACTTTTGATTCAGTGATTGA
GTTCTCACACAATAATAAGCTGATGTCAAAAATCCCGCCCGTGGTCACAA
GTGTAGTAGAGAAAAACACCATCCGGGAGGGGAAAACGTACGACGTACTT
TCCATACTATTAATAAGAGAAAACGGTAATGGTACAAAAATACATACTCG
GAAAAAGGGACATCTCCAAAATAAAGAGACAAAAACGAAAAAGGACGCAT
ACAGATGTTAGGTATCGTATAACTGCGTATGGCTGTCGGGGCGCATGTAT
ATCATATCATATCGAAGAACGATTGAACGAAGAGCCGCGGCTTTAGGGAA
ATCAAAAAAGACAAAAACGAAACAAAACAAAACAAACGTAAAACCAGAGA
AAGACAACACGACATCCGCCCGGAGGATACAAATTTGCGCCACTTGTAGC
TAATCAACTGTGGCGAACGAACCAGTACTTGTAGCTATCCTCTCCTTGGT
CTTTCTCGTCTCGTCCGGGCATATTTACTGAATGCCGTAGTCCAGCCCTG
GCTTTCTCTGCAGTGATCCATTTGGCCATGAAATATTTCGCCCCTTATTC
CGCCGTCCTGCGCCATTGCCCCTCGTCCTGGGCTGCAGTTGTCCACTTGT
CGGCCTTGATGCCGAAAGCTCTGAAGTCGTCCAGGAAACACCCCGTCCAC
TCTTTTTCCTGGCCCCCCACGCAGCCCGCGCGCCCCACCAATTCTCCGAA
CATCACGCACTTCGGCAGTCTCGTATCCTCCATGCGCGCCACAAACCCCG
CGAGCAAGATCCGCCTCCTGCGTAAAGTCGCCTCGATTCTCTCACTTCCC
GTGTCCAAATAGAAAATCGGGTGGTCGGCGCGATTGTTATTTCGCCAACC
GAAGCAGCGAGTCAGGAAGCTGTGGTGAGCTTGGTGCAGCGTGTCGTAGG
GGCACGCGCGCGGGCTCCACGTGACACAGCTGTACAGCATTATCTCGAGT
ACCTTGGCTCTGAGCATCCGTATTTTGAGATCGGGGAGAGCGCTCGGTCG
GTCTTCCAGTTCGAGGGTGTACTTCCGGAAGCTGCACCATGCGTTGCGTA
TGCGCTGATTGACCTCGATGGACAGGTCGGCATTGTGGTTGACGTTCCCC
CCGAGGTATACGAACTCGTTCGTTTGGCTGTACACCTGACCCGCTGCCTC
TACGCTGAATGTGGCGGTGGACTCCGGCATCCCCTTCGTGCGTAAACACA
TGATCTCGGTCTTGGCCTCCGATACGGTGAAGCCAAACGCCGCGCACGCG
CCCACGATCACCCCCATCTTCCTCAGCTTCTCGGGTAATTGCGTGACAAC
CCCGGCATCGTGAGCGTAAAGCATGCACCAAAGCGGCGTCGCCAGGACTG
GCAGTTCCTTCCCCCGACCCCCTTTTACTTCCTCAGTTGCACCAAAGCGT
CCATGATGCCTTTGTCCGCCTTGAAACGCGTGTAGGCCGCGCTTATAACC
GCTGCGAAGATGTTGAACAAGAGGGGCGCGAGCACGCACCCTTGACGAAG
GCCCTGTTCCACATAAAACCACCCCGAGCACACCCTGTCGTCGAGCCGCA
CGCATGCTCGCATGCCATCGTGGAATTGGCGAATGATCGATATCATATTC
TGTGGCACGCCAAAACGGGCGAGTACTGTGCCGAGGAGAGTTCGGTCAAC
GGAGTCGTACGCTTTGGTATGTCATGCTACTGTTTGTTGTTATAATTATA
CGAGGTATGTAACTCCCGTTGATCCTCGTATGTGTTTCTCTGTCTGCGTG
TGATATTATTTGCCCCCCGCCCGTACTGGAAGATCCAAGAGTTACTAATA
TTGCGAGCGTTTAGGGAGCTTCTAATCTGTGTGCTGTATCAATTTGAGCT
CGGGTGTATCAAAATATGTTCCTTTTCGTAATGTTACCCCGTGCGACATT
TGTGCATGACGTACGTATACAAAAGGACTATACGTAGTACGTAGATGGCG
AATGTACTTACTTCCACCTGTGACTTTTTCGTTCACGGTACGCACCAAAA
ATAATACGAAGTACGTCATTATCTTGATTATTTTGATGACTAGTCCGATA
GACCAAACCAGACTGTCCGAAGTCTACAAAAATATTATCAAGTGTGAAAC
TTCAAACTTTGTTCCTGTCCACCGTGTGCTTCATACCATATTCAAAGTGA
AAAACCGAAAAACCGAAAACCGAAAAAATCAGAGGTATTCAGGGCTTTTG
TACAGTCGTGAGGACAACGCCAGTTCAACAAGTCAAACACCCACGACACA
TTGCACCAACACCTGTGTTAAGCTGACGATAGTTACCAAACTATCCTTTA
GCGAGCGTATAGCGATAGCTACCCTATCTTATTATACTATATACTCATTG
CAAGAGTGTTGATTTTCTTGGAAAAAAAACTGGTGAGACGCGTCAGAGAT
GATGCACTGGTTGTGTGTGTACTTACTTTTGTGGAGTGTGTGTTTGTGTG
GTTTTCACTTCTATCAGCTCTATACGAGGTTCAACAAATATTAAGCGAAA
AGTGTGTGTGCGTGTGTGAGTGTATGTGTGTGTGTGTGTTTGTGAGTGTT
GTCATCCCGTTTATTCTGGACGTCAGACTTGTGGATGCACCAGCCGGGGT
CACACACACAGGAGGAAGGTCGCACAGGATTTCTCCACCTTCCTTCTGCT
GTGCGTGCCTTTCCCTCGCCGACCGTGAAGTTGAATTTTGTGTACTCACG
TAAGAATCGTTCTCCACTTGTTGGGTATGATGTGGGGAAGAGGCTCGAAC
TCACGTCCCAACGTCAGATGGTTTCGGCGTTACCAACTGAACCACCGAGG
CGACCGGCCAAAGCGAAAAGTCAAGAGATAGAGGTAGTATTCTACATATT
TCTTCCCATCAATATAGTATATTGCCGGTAAGTTACTTTCAACATGCCCA
CTTCATACCAATATTAGATGTGGGGAAAGAGAGGCGCATATTAATTGATC
CATGGTGACCTGTCAAGGCAGCACCCGTTTGGAACTACCTTGAGGTTTAC
TGGCCCTATGCCTGCGGACTCTCGGCAGTGAACGCCATCGGTACGCAATT
GCTTGACCCGATCAACTCGGGACTGACCCGATGGCGTGTGGCGGTTTAAA
TAAATAGATGGACGCCGCCGCGGAATTCGGGAGGAATCCCGTAAGTAAGC
ACCAGATTCAGCCTGAGTTTGGAGATGAGCAGGCTGACGCGGGACGGGAC
TGCCGAACCCGTCTCGCGAGACCAAATTCTCAGGTGCGAACGGGGACAGG
GAAATATTCATTTTCCCTGTTCAGCTGACCACGTGCAGGTTTGGCAACCT
TACCCGGTTGATTCATACTCTTGCTACATGTGTGACCATACATTAACATG
CCCACTCCATACCTACAGTGGATGTGGCAAAGAGAGGCGCATTTTAATTG
GTTCATGGTGACCTGCCCAGGCAGCACTCGTTCGTTCGGATCTGCCTTGA
GGTTTAATGGCCCTGTACCAGCGGACTCTCGGCAGTTGCTGTTGTTGTTG
TTTCTCACATTCAGCGTATTGGTTGCCAACCCGAAAAAAACTACTTACAC
GGTGGCCAATCCCGCTCGTGGTCTGCTGAACAGGGAAAAGAGAACAAAGA
ACGCCATCGGTACGCAATTGCGTGACCCAATAAACTCAGGACTGGCCCAA
TGGCGTATGGCGGTTTCAAATAAATAAATGGACGCCACCGCGGAACTCGG
AAGGAATCCCGTGAGTAAGCACCAGATTCAGCCTGAGTATGGGAATGAGC
AGGCTGGCGCGGGACGGGACTGCCGTACGCGTCTCGCGAGACCAAATTCT
CAGGCGCAAACGGAGACAGGGAAATATCCATTTTCCCTGTTCATCTGACC
ACGAGCCGGATTGGCAACCTTACCCGGTTGATCCATACTCTTGCTATATG
TGATGATCATACGTACATACCAGGTACATAATACCAGGTATATGTAAATA
TAGTCATCACTCGCCAGCCCGCGTTAAATCACCAGCCCTGGTGCAATTCT
AAAATGTACCAGCGAGAGAACGCCTCCAGAACTACACCAGAACTACACCT
TATTTTGTAATCTATAAAAAATAAAATGCCAAGATTTTCAGTCACAGCGT
AATAGGCTAGTTGGTAAGATTGCAGTAGTCGAAAAACTTTCGAGGTTCAA
TCCCCAGCGTCGAACCATTTTTTTATCTTACTTGAACCAAGCGCCAGCCA
TGAAATGGGACCTCGCAGTCAGCTGGGCTAGCGGGGTCTGGGTTAGCGAT
AGCGTTAGGATTTTTTATTTTTCGCAGACGGCAGCTGGGCTAGCGGGGTC
TGGGTTAGGGTTAGCGATAGCGTTAGGATTTTTTATTTTTCGCAGACGGG
GCATGAATGAACCCAGCCATGAATTGGGACCTCGCAGTCAGCTAGGTCAA
TTGGGCTAGGATTTTTTATTTTTCGCAGACGGCAGCTGGGCTAGGGGGTC
TGGGTTAGGGTTAGCGATAGCGTTCGGATTTTTTATTTTTCGCAGACGGG
GCATGAATGGACCCTCGCAGTCAGCTAGGTGAATTGGGACCTCGCAGTCA
GCTGGGCTAGAGGGGTCTGGGTTAGGGTTAGCGATAGCGTTAGGAGCTAG
GGTAGGGGGTCTGGGTTAGGGTTATGTGTAGATCTGGAGGCGTTCTCTCG
CTGGTACATTTTAGAAATGCACCAGGGCTGGTGATTTAACGCGGGCTGCA
TCACTCGCAGGCTGGTGTTTGGTGTTGTTGGAGCATTTGGCGTTACTCTG
TTGAGAAAACACCATACCAAAATATACGAATACAGGGCAGTGTCAAGTAC
TCTGAATCCTATTAATATAGTAGAGAGAATATGCTATCCTTGTATCACCA
ACACTACTTTCTGCTGCTGTAACTGTGCTACTGCTGCTGTTGTACTGCTG
TGGATTCCTGTTAACGGATCCTCTCGAAGGTCATCATGGACTTCGACCTG
ACCATGACGGCGCCGGGCTCTCAGCAGTGCCACCACATGTTTGAGACGTG
AGGGGGTGTTTTGTTTACACACTACGTGACGTGCCTGTTGTATCTTGTTA
CAACCCGTTTGGTGGGGCCGGGCCGTTCAAGGTCATAGTTGAAGATAATT
TTGTGTCTTTACCACTTAAAAGTACAGTTATCTAAGGTCCTGTAGTCCAT
AAAAGATACGCCATTTGTATTTTGTTGACGCCGCGGGCGTATCTCAGACT
AAAAGTCTCTATAAGTCAGTCAAATTATTTACAGGCGAACTGAGGCAGCT
GAGCCAAGGACTGAACTGAATGTAAGATGGGACAGACGTTGACGCCTCTT
TCCTCCTCAAAAACTCAACAAGTTCATCGTGCGGGTTCACTTTTGGGCCG
AAAAACACCTGGTCGGAATTTCTTCCCACTGTTTAGTACACTGTTTTATA
TGCTCCGCCCTAATACCCGGACGGGAATTCTCCCGGAAATCCGCAAGGAA
TATCCGACAGGGCTTAAATCGGAAACGCTTTTCTGTCCGCTTCCCTCGAT
GGAAACATCTCGAGCTATCCTCAACCCAAATTTCAATTTGAGGGATCCAG
GGGTACAAAAGTAAGAGGTTTTGTTTGTTTGGTAGGCGTTTCTATTTGGC
GAGTTATTAGCAGGGCGAGATTTCGGATGGAGCGACTCAGAATTAATTGC
TCGACTTGCAAGCCTTTACCAGCGTGCTGGTATCTAGTGATCGAAGAACT
GAAAAAAACCCCGACAAACACTGAAGAAGCTGTCTCGCCTGAATTCAAAT
TTGAGACTGCTTCTTTTTCGTGTTGGCGTATTAATAGCAGTACAAAGCTG
AGATCCCGGATGGATAGCGACTCGAAAGACCTACTATAACAGTACTCGAC
TTGCGAGTCTCCATCATGATCTTGCTGGTGCCTCGTCATCGCCTTGGTGC
TTGCTTCCGAGGCCATCGACGGTGACCTACCTCCCTGGTTATGAGGAAAG
GGGCGATGCTCCCCGAACCACTACGGTATTTCAGTAATAATAAGGCGTTA
CGGCAGGGGGGGGAGGAAATACAAATGCCACCAGTGGCTGTACCATTCCC
TCGGTCCAAAAGTTAATCCGCAAGGAATTACTTTCACTCTACTTGCCTTC
TCAAACACCTAAGTCGAAGAGGTTTGAAGAAAAATCAGAACGCGCCTTTA
CCTTCTGAGCATCATCATCATCCCCCAGTCAGGAGGAAAAAAATGTCAAA
ACGTTTATAGGTGGGGTCATAGGCTGCAAATACAAAACCTCTTCATGGCA
TCTTCTGAGTCTCTCCACTCGAGAGCTCAGCTCATGCAGATTGTGCTGCG
ATTAATAGGGCCGGAACAAGTGATGGGAAGCTACATTCGTATACACATGC
ACCCTTGGCGCGTTCATCAAATTTATTACTATTGTTTATCGTTGGAAGAC
GTCACAAATGTATTTCCGACTACATTAGTGGCCTCTCAATCGCAATTTCC
TTGTGGATTTGCGACTGAAATGCCGTCGGGAAAATAGCGCGGGTCACGCG
GAAACGGAACTCTCGACTTCTAAAAATTTTCTACGAGTATTGTCTACCGT
ATGCATTACTTTCGGCAGCATTTCTGAAGATGCTCGTAGTTGATGTCATC
GAAGTCAATGAAGCTTCGTAAGGCGCTGTAGCGCTTTTTTTTTAACCTCT
CGTACGACATGGTGACTTGTCTCATTTAATCTCCTCCCCTCAGCCATTCT
TCGCTTTCGTCCCCGATCCGCACGCTGCCGATACCCCTAGGTCGTCCACC
CTTCCGGAAGAGCTAAGGTGCAGGCTGACCCCGTATCTGAATGGTCAGAT
CAAGGTACAGTATTTTTTTGTATCGCATTGTAGTGTATCGTACTATGGTT
CAGGATAGGACGACGACTATTATTACACCCCCAAGCAACAGCGCCTGCAG
CTGACGATAAACCCAACTTCCATGCACGGTTACAGAAGTTGCAATGGCCA
ACATCATAGTTTCAAAGGCCGCGCCGTTTTGGGGCTTGCAGGAAGCCATC
GCACGGTCTTACTCGCTGCCCCTCTGTATTGCTGGTCCAACCTCCCGCGC
TGCACGCCTTTTTGTTGGTGAGGGGCGGAGACGTTAGACTGCAAGCAAGC
GCTCGGCTATATTCATCGATCCCTTCACCCTACCCACACTAAAACGTATA
CTATCGGCTCGATCTGTCGTTCAAGGTTTCGTCTCCGGAGGAGTGGTGGG
AGACCTTCCACGGCTTGCTCGTCGACGGGCGGCTGACCAGAGAGCAGGTT
GTTTTGGTGGCGAGGGGAGCTAGCGTCACGCTGCGGGAAGGCACGGCTGA
GCTGATGCTACTCCTGCGAGATCTTGGGGTAAGAAGGTGCTTCTTGAGTC
ACGTCGACTGGAGAGGAGCGCAGTGCACCCGACTTCGCCATCACGCAATG
GACGAGACCCCCACGGCGCCTCGCCTGCAAGCGCTGCCGCCGTATCTTGC
CTGCGCGACCATTACGTTCGTTCACGTGCATCCATTGATTTGCCTTCGTG
ACCATACCATATTTTTACTTGCATTGCGCCCCCCCCCGCCGCCGCCCCCA
CCGATGCTGTCTGGTCGTGTCAGTGCTCACTATGTTCGCCCATGTGCCAC
CCGTATTACCGCCGGAATGCGATCCCTACCGTCTCTTAGTATCTCGCTGC
GTCGGCCGGAATGCGGCGATCCCACGGCCTCTTGGTTTCCTCGCTGTGCG
GCACTTTCGCCAGGTCCCTCTGCTGATAGCGTCCGCAGGCATCAGCGACA
TTATCGAGGAGACTCTGCGACGACACGGTCTCCTGCTGGAGAACGTTACA
ATCCGAGCGAACACGATGGTCTTTGGCGAGGACGGGACCTTGAAGAGCTT
CCGAGAGTCCCCTCCAATCCACTCGAGGTACTTCGCTGTACAGGGCGGTT
CTGTAGCAGCAGAACGTCCGTAACCGTTGCGCTTTTTCGACGCGAGGTTG
ACCGAGGGTTAAGCCCTTTCGTGCGTGCAACGATCGAATCGCGTCCGCCA
CGAAAAGGCGGCGTACGACATCGCGAAGTGTTTTTCTACACCCTATGAGT
TGATCCCCATAGGGGCGCTTCGGGTGAGGCGAAACGCACCCAGCCCGCCG
GCCGATAACCTCCAAGGGTCGATGTGTCTATTCCCAAGTATTGCCGTATG
CAACAAGACGCAGGGGGGGGTCGTTCGACGACGACGGAACCTTATCCCCT
TCTCCCCCTAACGCGCCGCCTTTGTCGCGGACTGCTGCCTTGCTATCTCT
AAAAAGAAACAAGAAACAGATGGCGGAGTGGGAGAGCGAATACTTCGAGT
CGCACGCCGCTCGCCGCTGCGTGTTGGTGGTCGGCGACAAGCCGGGGGAC
GCGGATATGAGCCACGGGGTGGCCCCCGAGGAACGCTGCCTCAAGATCGG
CTTCTTCGACCACTCCCGCGAGCATCCGCATCCGGACCTTCCGCCGTTGC
CGCCCCCTCTGTCCTTACCGGCCGTTTCCGCGGGACGCGACGGTAGCCAC
CCGGACGGGGCTGGTCATGCATACGCATGGGGTGGAGGTTTTGAGCTAGG
TACTCAGAGTCGAGATTATTCCCCTTCCTCGCCGGCGGGCGCGGCTGACT
CGGAAGCCAGAACGATTATCCAGCACCCAAGGGAACGTTCTGGGGCGGAC
GAAGATCGTGACGAGCCAAGCCGGTCATGCGTGCACGCGTCGGCGACGGA
GCTGGCCGATGTGGGGGGTCACGGCGCAAGTTCGGTGCACCTCAAGAGGA
TCGCAGGTTCCCCTCGGCGAGCAGAAAAGGAAGACCATCGGAACTTGCTG
GCACGACTCGCAGAAGGAGCAAGCTCTGCTATTTGGCCGCCCTCCTTGGC
GGGTGATAGGGGGTCAACGGATCTGATGATGGCGCCCGAGAGGCGGCGGG
CGCACGGGAAGGAGCCGTTTTGGCAGGACAGCGGGTTGTGCCTCGCGACG
ACTCAGATGCTGCTCGCGTATTGGGACAGCTTTGACGTCGTGGCGCGGGA
CGGGCACTCGATGGGCTTGGTTACGGGCGTTTTGAGGCACGTGATCGGCG
ATAGCGGAGACCGGGCCGGATCTCCTTCGAAACTAAGGGACTAA
back to top

Coding sequence (CDS) from alignment at F-serratus_M_contig88:607528..622821+

>mRNA_F-serratus_M_contig88.20169.1 ID=mRNA_F-serratus_M_contig88.20169.1|Name=mRNA_F-serratus_M_contig88.20169.1|organism=Fucus serratus male|type=CDS|length=2814bp|location=Sequence derived from alignment at F-serratus_M_contig88:607528..622821+ (Fucus serratus male)
ATGCTACTCTGTCGAAGGCTGGAACTGCTACTTTGCGTGTTATCATCCAC
ATTGCTGAACATTTTCGCGTTGTTGCCGGAATCCTTTCTTTACGCCGTCA
GCTGCTCACAAAGTCCAATCGACTGCTGGGTTCGAAGGTCAACGCTGCCA
GCTGCTGCAACTTGCTCCAGCCGAAGCTGCTGCCGCTCCAACTGCAGCCA
CCTCCGTAAAGAAAGCTATACGTCCGGTTGGTTAAAGACAGCAATGGGCC
CCGTCTATGCGTCAACAAATGCCTCTGATAAGATAGAGAGGATTCGGAGT
ATTCTGCGCGAGAATCATGGTGCCGCTTCTTCCGACGGCATTCAGATGCT
ACTCTGTCGAAGGCTGGAACTGCTACTTTGCGTGTTATCATCCACATTGC
TGAACATTTTCGCGTTGTTGCCGGAATCCTTTCTTTACGCCGTCAGCTGC
TCACAAAGTCCAATCGACTGCTGGGTTCGAAGGTCAACGCTGCCAGCTGC
TGCAACTTGCTCCAGCCGAAGCTGCTGCCGCTCCAACTGCAGCCACCTCC
GTAAAGAAAGCTATACGTCCGGTTGGTTAAAGACAGCAATGGGCCCCGTC
TATGCGTCAACAAATGCCTCTGATAAGATAGAGAGGATTCGGAGTATTCT
GCGCGAGAATCATGGTGCCGCTTCTTCCGACGGCATTCAGGTCATCATGG
ACTTCGACCTGACCATGACGGCGCCGGGCTCTCAGCAGTGCCACCACATG
TTTGAGACGTCATCATGGACTTCGACCTGACCATGACGGCGCCGGGCTCT
CAGCAGTGCCACCACATGTTTGAGACGTCGTCCACCCTTCCGGAAGAGCT
AAGGTGCAGGCTGACCCCGTATCTGAATGGTCAGATCAAGGTCGTCCACC
CTTCCGGAAGAGCTAAGGTGCAGGCTGACCCCGTATCTGAATGGTCAGAT
CAAGGTTTCGTCTCCGGAGGAGTGGTGGGAGACCTTCCACGGCTTGCTCG
TCGACGGGCGGCTGACCAGAGAGCAGGTTGTTTTGGTGGCGAGGGGAGCT
AGCGTCACGCTGCGGGAAGGCACGGCTGAGCTGATGCTACTCCTGCGAGA
TCTTGGGGTTTCGTCTCCGGAGGAGTGGTGGGAGACCTTCCACGGCTTGC
TCGTCGACGGGCGGCTGACCAGAGAGCAGGTTGTTTTGGTGGCGAGGGGA
GCTAGCGTCACGCTGCGGGAAGGCACGGCTGAGCTGATGCTACTCCTGCG
AGATCTTGGGGTCCCTCTGCTGATAGCGTCCGCAGGCATCAGCGACATTA
TCGAGGAGACTCTGCGACGACACGGTCTCCTGCTGGAGAACGTTACAATC
CGAGCGAACACGATGGTCTTTGGCGAGGACGGGACCTTGAAGAGCTTCCG
AGAGTCCCCTCCAATCCACTCGAGGTCCCTCTGCTGATAGCGTCCGCAGG
CATCAGCGACATTATCGAGGAGACTCTGCGACGACACGGTCTCCTGCTGG
AGAACGTTACAATCCGAGCGAACACGATGGTCTTTGGCGAGGACGGGACC
TTGAAGAGCTTCCGAGAGTCCCCTCCAATCCACTCGAGAAACAAGAAACA
GATGGCGGAGTGGGAGAGCGAATACTTCGAGTCGCACGCCGCTCGCCGCT
GCGTGTTGGTGGTCGGCGACAAGCCGGGGGACGCGGATATGAGCCACGGG
GTGGCCCCCGAGGAACGCTGCCTCAAGATCGGCTTCTTCGACCACTCCCG
CGAGCATCCGCATCCGGACCTTCCGCCGTTGCCGCCCCCTCTGTCCTTAC
CGGCCGTTTCCGCGGGACGCGACGGTAGCCACCCGGACGGGGCTGGTCAT
GCATACGCATGGGGTGGAGGTTTTGAGCTAGAAACAAGAAACAGATGGCG
GAGTGGGAGAGCGAATACTTCGAGTCGCACGCCGCTCGCCGCTGCGTGTT
GGTGGTCGGCGACAAGCCGGGGGACGCGGATATGAGCCACGGGGTGGCCC
CCGAGGAACGCTGCCTCAAGATCGGCTTCTTCGACCACTCCCGCGAGCAT
CCGCATCCGGACCTTCCGCCGTTGCCGCCCCCTCTGTCCTTACCGGCCGT
TTCCGCGGGACGCGACGGTAGCCACCCGGACGGGGCTGGTCATGCATACG
CATGGGGTGGAGGTTTTGAGCTAGAAAAGGAAGACCATCGGAACTTGCTG
GCACGACTCGCAGAAGGAGCAAGCTCTGCTATTTGGCCGCCCTCCTTGGC
GGGTGATAGGGGGTCAACGGATCTGATGATGGCGCCCGAGAGGCGGCGGG
CGCACGGGAAGGAGCCGTTTTGGCAGGACAGCGGGTTGTGCCTCGCGACG
ACTCAGATGCTGCTCGCGTATTGGGACAGCTTTGACGTCGTGGCGCGGGA
CGGGCACTCGATGGGCTTGGTTACGGGCGTTTTGAGGCACGTGATCGGCG
ATAGCGGAGACCGGGCCGGATCTCCTTCGAAACTAAGGGACTAAAAAAGG
AAGACCATCGGAACTTGCTGGCACGACTCGCAGAAGGAGCAAGCTCTGCT
ATTTGGCCGCCCTCCTTGGCGGGTGATAGGGGGTCAACGGATCTGATGAT
GGCGCCCGAGAGGCGGCGGGCGCACGGGAAGGAGCCGTTTTGGCAGGACA
GCGGGTTGTGCCTCGCGACGACTCAGATGCTGCTCGCGTATTGGGACAGC
TTTGACGTCGTGGCGCGGGACGGGCACTCGATGGGCTTGGTTACGGGCGT
TTTGAGGCACGTGATCGGCGATAGCGGAGACCGGGCCGGATCTCCTTCGA
AACTAAGGGACTAA
back to top