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|
Homology
BLAST of mRNA_F-serratus_M_contig88.20152.1 vs. uniprot
Match: D7FNU5_ECTSI (Elongin-C n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FNU5_ECTSI) HSP 1 Score: 184 bits (466), Expect = 1.070e-58 Identity = 94/96 (97.92%), Postives = 95/96 (98.96%), Query Frame = 1
Query: 1 QEFVKLVSAEGAEFWVDRKCAMVSGTIKAMLSAGGFGEAASGQVHFAEISTPILEKVIQFVYYKVRYTNSASRIPEFHIEPELALELLMAANFLDC 288
QEFVKLVSAEGAEFWVDRKCAMVSGTIKAMLS GGFGEAASGQVHFAEISTPILEKVIQFVYYKVRYTNSA+RIPEFHIEPELALELLMAANFLDC
Sbjct: 6 QEFVKLVSAEGAEFWVDRKCAMVSGTIKAMLS-GGFGEAASGQVHFAEISTPILEKVIQFVYYKVRYTNSATRIPEFHIEPELALELLMAANFLDC 100
BLAST of mRNA_F-serratus_M_contig88.20152.1 vs. uniprot
Match: A0A1V9Z8H2_9STRA (Elongin-C n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A1V9Z8H2_9STRA) HSP 1 Score: 131 bits (330), Expect = 6.040e-38 Identity = 68/95 (71.58%), Postives = 82/95 (86.32%), Query Frame = 1
Query: 4 EFVKLVSAEGAEFWVDRKCAMVSGTIKAMLSAGGFGEAASGQVHFAEISTPILEKVIQFVYYKVRYTNSASRIPEFHIEPELALELLMAANFLDC 288
E+VKL+SAEG EF+V RKCA+VSGTIKAMLS G F E+ G+V F +IS PILEKVIQ++YYK RY+NS +RIP+F IEPE+ALELLMAAN+LDC
Sbjct: 9 EYVKLISAEGHEFFVARKCALVSGTIKAMLS-GHFSES-KGEVRFPDISAPILEKVIQYMYYKKRYSNSNARIPDFGIEPEMALELLMAANYLDC 101
BLAST of mRNA_F-serratus_M_contig88.20152.1 vs. uniprot
Match: L8GYQ9_ACACA (Elongin-C n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GYQ9_ACACA) HSP 1 Score: 131 bits (330), Expect = 6.420e-38 Identity = 69/93 (74.19%), Postives = 79/93 (84.95%), Query Frame = 1
Query: 10 VKLVSAEGAEFWVDRKCAMVSGTIKAMLSAGG-FGEAASGQVHFAEISTPILEKVIQFVYYKVRYTNSASRIPEFHIEPELALELLMAANFLD 285
VKL+SA+G EF VDRK AMVSGTIK+MLS G F E A G+++F EISTPILEKVIQ+ YYK+RYTNS + IPEF IEPE+ALELLMAANFLD
Sbjct: 10 VKLISADGHEFVVDRKAAMVSGTIKSMLSGPGTFTEQAMGEINFREISTPILEKVIQYFYYKLRYTNSTTEIPEFPIEPEVALELLMAANFLD 102
BLAST of mRNA_F-serratus_M_contig88.20152.1 vs. uniprot
Match: A0A6U1KLA4_9STRA (Elongin-C n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A6U1KLA4_9STRA) HSP 1 Score: 131 bits (330), Expect = 1.010e-37 Identity = 69/95 (72.63%), Postives = 79/95 (83.16%), Query Frame = 1
Query: 4 EFVKLVSAEGAEFWVDRKCAMVSGTIKAMLSAGGFGEAASGQVHFAEISTPILEKVIQFVYYKVRYTNSASRIPEFHIEPELALELLMAANFLDC 288
++VKL+SAEG EF+VDR+CA SGTIKAMLS G F E+ SG++ F EISTPILEKVIQ+ YYK Y NS RIPEF IEPE+ALELLMAANFLDC
Sbjct: 26 QYVKLISAEGHEFFVDRQCAQTSGTIKAMLS-GSFTES-SGEIKFPEISTPILEKVIQYFYYKASYKNSQVRIPEFAIEPEVALELLMAANFLDC 118
BLAST of mRNA_F-serratus_M_contig88.20152.1 vs. uniprot
Match: A0A7S2XYA0_9STRA (Elongin-C n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XYA0_9STRA) HSP 1 Score: 130 bits (327), Expect = 1.950e-37 Identity = 69/93 (74.19%), Postives = 79/93 (84.95%), Query Frame = 1
Query: 10 VKLVSAEGAEFWVDRKCAMVSGTIKAMLSAGGFGEAASGQVHFAEISTPILEKVIQFVYYKVRYTNSASRIPEFHIEPELALELLMAANFLDC 288
VKLVS+EG EF+ DR+CAMVSGTI AMLS G F E+ G+V F EIS+ ILEK+IQ+ YYKVRYTNS SRIP+F IEPE+ALELLMAANFLDC
Sbjct: 15 VKLVSSEGHEFYCDRRCAMVSGTINAMLS-GQFAES-RGEVTFPEISSAILEKIIQYCYYKVRYTNSTSRIPDFPIEPEIALELLMAANFLDC 105
BLAST of mRNA_F-serratus_M_contig88.20152.1 vs. uniprot
Match: A0A6G0WB49_9STRA (Elongin-C n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WB49_9STRA) HSP 1 Score: 130 bits (326), Expect = 2.610e-37 Identity = 65/95 (68.42%), Postives = 82/95 (86.32%), Query Frame = 1
Query: 4 EFVKLVSAEGAEFWVDRKCAMVSGTIKAMLSAGGFGEAASGQVHFAEISTPILEKVIQFVYYKVRYTNSASRIPEFHIEPELALELLMAANFLDC 288
++VKL+SAEG EF+V RKCAMVSGTIKAML+ G F E+ G+V F +IS PILEK+IQ+ Y+KVRY+NS +R+P+F IEPE+ALELLMAAN+LDC
Sbjct: 11 DYVKLISAEGQEFYVARKCAMVSGTIKAMLT-GHFSES-KGEVRFPDISAPILEKIIQYFYFKVRYSNSNARLPDFTIEPEIALELLMAANYLDC 103
BLAST of mRNA_F-serratus_M_contig88.20152.1 vs. uniprot
Match: A0A1W0A8X8_9STRA (Elongin-C n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A8X8_9STRA) HSP 1 Score: 129 bits (325), Expect = 3.940e-37 Identity = 66/95 (69.47%), Postives = 82/95 (86.32%), Query Frame = 1
Query: 4 EFVKLVSAEGAEFWVDRKCAMVSGTIKAMLSAGGFGEAASGQVHFAEISTPILEKVIQFVYYKVRYTNSASRIPEFHIEPELALELLMAANFLDC 288
E+VKLVSAEG EF+V RKCA+VSGTIKAML G F E+ G++ F +IS PILEKVIQ++YYK RY+NS +RIPEF+IEPE++LELLMAAN+L+C
Sbjct: 13 EYVKLVSAEGHEFYVARKCALVSGTIKAML-LGQFSES-KGEIRFPDISAPILEKVIQYLYYKKRYSNSNARIPEFNIEPEMSLELLMAANYLEC 105
BLAST of mRNA_F-serratus_M_contig88.20152.1 vs. uniprot
Match: K8Z122_NANGC (Elongin-C n=2 Tax=Monodopsidaceae TaxID=425072 RepID=K8Z122_NANGC) HSP 1 Score: 129 bits (323), Expect = 6.630e-37 Identity = 66/95 (69.47%), Postives = 81/95 (85.26%), Query Frame = 1
Query: 4 EFVKLVSAEGAEFWVDRKCAMVSGTIKAMLSAGGFGEAASGQVHFAEISTPILEKVIQFVYYKVRYTNSASRIPEFHIEPELALELLMAANFLDC 288
++VKL+SAEG EF VDRKCA VS TI+AML AG F E+ G+++F EIST ILEKVIQ++YYKVRYTNS ++P+F +EPE+ALELLMAANFLDC
Sbjct: 7 KYVKLISAEGHEFIVDRKCACVSKTIEAML-AGNFAES-KGEINFPEISTNILEKVIQYLYYKVRYTNSPQKVPDFKMEPEIALELLMAANFLDC 99
BLAST of mRNA_F-serratus_M_contig88.20152.1 vs. uniprot
Match: F0YER3_AURAN (Elongin-C (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YER3_AURAN) HSP 1 Score: 127 bits (318), Expect = 3.120e-36 Identity = 67/93 (72.04%), Postives = 75/93 (80.65%), Query Frame = 1
Query: 22 SAEGAEFWVDRKCAMVSGTIKAMLSAGG----FGEAASGQVHFAEISTPILEKVIQFVYYKVRYTNSASRIPEFHIEPELALELLMAANFLDC 288
SAEG EFWVDRKCA SGTIKAMLS F E+ SG++ F EISTPILEKVIQ+ YYK+RYTNS RIPEF I+PE+ALELLMA+NFLDC
Sbjct: 1 SAEGHEFWVDRKCANTSGTIKAMLSGPRGPRQFTES-SGEIKFPEISTPILEKVIQYFYYKLRYTNSQVRIPEFQIDPEMALELLMASNFLDC 92
BLAST of mRNA_F-serratus_M_contig88.20152.1 vs. uniprot
Match: A0A6B2LUV1_9EUKA (Elongin-C n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2LUV1_9EUKA) HSP 1 Score: 126 bits (317), Expect = 4.300e-36 Identity = 61/90 (67.78%), Postives = 76/90 (84.44%), Query Frame = 1
Query: 16 LVSAEGAEFWVDRKCAMVSGTIKAMLSAGGFGEAASGQVHFAEISTPILEKVIQFVYYKVRYTNSASRIPEFHIEPELALELLMAANFLD 285
++S+EG EF VDRKCAMVSGTI++ML GGF E+ +G++ F EI+T ILEKVIQ+ YYKV+YTNS + P+F IEPE+ALELLMAANFLD
Sbjct: 1 MISSEGHEFIVDRKCAMVSGTIRSMLDGGGFLESEAGEISFKEINTNILEKVIQYFYYKVKYTNSTGQTPDFPIEPEIALELLMAANFLD 90
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 184.9 |
| Seed ortholog evalue | 1.8e-44 |
| Seed eggNOG ortholog | 2880.D7FNU5 |
| Preferred name | TCEB1 |
| KEGG ko | ko:K03872 |
| KEGG Pathway | ko04066,ko04120,ko05200,ko05211,map04066,map04120,map05200,map05211 |
| KEGG Module | M00383,M00388 |
| Hectar predicted targeting category | other localisation |
| GOs | GO:0000003,GO:0000151,GO:0000153,GO:0000280,GO:0000578,GO:0000819,GO:0001666,GO:0002009,GO:0002165,GO:0003002,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005694,GO:0005700,GO:0005705,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006281,GO:0006289,GO:0006351,GO:0006354,GO:0006355,GO:0006357,GO:0006366,GO:0006368,GO:0006464,GO:0006725,GO:0006807,GO:0006928,GO:0006950,GO:0006974,GO:0006996,GO:0007017,GO:0007018,GO:0007049,GO:0007059,GO:0007135,GO:0007275,GO:0007350,GO:0007351,GO:0007389,GO:0007444,GO:0007472,GO:0007474,GO:0007476,GO:0007552,GO:0007560,GO:0008023,GO:0008150,GO:0008152,GO:0008595,GO:0009058,GO:0009059,GO:0009628,GO:0009653,GO:0009790,GO:0009791,GO:0009798,GO:0009880,GO:0009886,GO:0009887,GO:0009888,GO:0009889,GO:0009891,GO:0009893,GO:0009948,GO:0009952,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010564,GO:0010604,GO:0010628,GO:0010638,GO:0016043,GO:0016070,GO:0016344,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0019538,GO:0019904,GO:0022402,GO:0022414,GO:0030891,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031461,GO:0031462,GO:0031463,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0032774,GO:0032784,GO:0032786,GO:0032968,GO:0032991,GO:0033043,GO:0033044,GO:0033045,GO:0033554,GO:0034243,GO:0034641,GO:0034645,GO:0034654,GO:0035107,GO:0035114,GO:0035120,GO:0035220,GO:0035239,GO:0035282,GO:0035295,GO:0036211,GO:0036293,GO:0036294,GO:0040020,GO:0042221,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043618,GO:0043620,GO:0043687,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044464,GO:0044877,GO:0045132,GO:0045144,GO:0045787,GO:0045836,GO:0045893,GO:0045935,GO:0045944,GO:0046483,GO:0048285,GO:0048513,GO:0048518,GO:0048522,GO:0048563,GO:0048569,GO:0048707,GO:0048729,GO:0048731,GO:0048736,GO:0048737,GO:0048856,GO:0050000,GO:0050789,GO:0050794,GO:0050896,GO:0051128,GO:0051130,GO:0051171,GO:0051173,GO:0051179,GO:0051234,GO:0051252,GO:0051254,GO:0051276,GO:0051303,GO:0051305,GO:0051321,GO:0051445,GO:0051446,GO:0051640,GO:0051641,GO:0051649,GO:0051656,GO:0051716,GO:0051726,GO:0051759,GO:0051783,GO:0051785,GO:0051983,GO:0051984,GO:0060255,GO:0060429,GO:0060562,GO:0061418,GO:0061983,GO:0065007,GO:0070013,GO:0070192,GO:0070449,GO:0070482,GO:0070887,GO:0070911,GO:0071453,GO:0071456,GO:0071704,GO:0071840,GO:0080090,GO:0090068,GO:0090304,GO:0097659,GO:0098687,GO:0098813,GO:0140013,GO:1901360,GO:1901362,GO:1901564,GO:1901576,GO:1901987,GO:1901989,GO:1901993,GO:1901995,GO:1902099,GO:1902101,GO:1902102,GO:1902104,GO:1902494,GO:1902680,GO:1903046,GO:1903506,GO:1903508,GO:1905132,GO:1905134,GO:1905818,GO:1905820,GO:1990234,GO:2000112,GO:2000241,GO:2000243,GO:2001141 |
| EggNOG free text desc. | positive regulation of transcription elongation from RNA polymerase II promoter |
| EggNOG OGs | KOG3473@1,KOG3473@2759 |
| Ec32 ortholog description | RNA polymerase II transcription elongation factor Elongin/SIII, subunit elongin C |
| Ec32 ortholog | Ec-12_003330.1 |
| COG Functional cat. | I |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko00001,ko00002,ko03400,ko04121 |
| Exons | 3 |
| Model size | 291 |
| Cds size | 291 |
| Stop | 1 |
| Start | 0 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622932562.1735883-CDS-F-serratus_M_contig88:250199..250298 | 1622932562.1735883-CDS-F-serratus_M_contig88:250199..250298 | Fucus serratus male | CDS | F-serratus_M_contig88 250200..250298 - |
| 1690964366.9429238-CDS-F-serratus_M_contig88:250199..250298 | 1690964366.9429238-CDS-F-serratus_M_contig88:250199..250298 | Fucus serratus male | CDS | F-serratus_M_contig88 250200..250298 - |
| 1622932562.4612575-CDS-F-serratus_M_contig88:250613..250708 | 1622932562.4612575-CDS-F-serratus_M_contig88:250613..250708 | Fucus serratus male | CDS | F-serratus_M_contig88 250614..250708 - |
| 1690964366.9571419-CDS-F-serratus_M_contig88:250613..250708 | 1690964366.9571419-CDS-F-serratus_M_contig88:250613..250708 | Fucus serratus male | CDS | F-serratus_M_contig88 250614..250708 - |
| 1622932562.500699-CDS-F-serratus_M_contig88:258485..258582 | 1622932562.500699-CDS-F-serratus_M_contig88:258485..258582 | Fucus serratus male | CDS | F-serratus_M_contig88 258486..258582 - |
| 1690964366.9677298-CDS-F-serratus_M_contig88:258485..258582 | 1690964366.9677298-CDS-F-serratus_M_contig88:258485..258582 | Fucus serratus male | CDS | F-serratus_M_contig88 258486..258582 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig88.20152.1 >prot_F-serratus_M_contig88.20152.1 ID=prot_F-serratus_M_contig88.20152.1|Name=mRNA_F-serratus_M_contig88.20152.1|organism=Fucus serratus male|type=polypeptide|length=97bp
QEFVKLVSAEGAEFWVDRKCAMVSGTIKAMLSAGGFGEAASGQVHFAEIS
TPILEKVIQFVYYKVRYTNSASRIPEFHIEPELALELLMAANFLDC* back to topmRNA from alignment at F-serratus_M_contig88:250200..258582- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_F-serratus_M_contig88.20152.1 ID=mRNA_F-serratus_M_contig88.20152.1|Name=mRNA_F-serratus_M_contig88.20152.1|organism=Fucus serratus male|type=mRNA|length=8383bp|location=Sequence derived from alignment at F-serratus_M_contig88:250200..258582- (Fucus serratus male)
CAGGAATTTGTGAAGCTTGTGAGCGCCGAGGGGGCGGAGTTCTGGGTGGA
TCGCAAGTGCGCCATGGTGTCCGGAACCATCAAAGCAATGCTCAGCGGTG
AGAGAGCTCAAGAACCGACCACTACTGCCCCCCTGGGTCTTGGGACATTT
TTCATTATCCGCCTTGGTATTTTTCACGTTTGTTTAGACGAAAATGCTTT
GATGAGGCGGAAATATATAGGGAGGTGTAGGAAATCGAGATTCTGAACGT
CGGGCCGATTTCAGGTTCCGGGGGGATCGTGACGAACGGAAATGTTTTTT
TGCGTGCTTATCATGATAATGAGGCGTCGTCGGGCGGCCTCGGACAATTC
GGACAATTCAGTAGTCGGGATCAAGATGCACGTCTATTATCTACTGTGCC
AAGCAGTTGGAAAGCTTTAAACAGACATTAGCTCACCTACCAGGGCGCAT
GCACTCGCAGATTCGTTGGCCAACCCGGAAATTGGTCTCTGAAATACTCG
TCGCTGATTTTGAAGCTGTAAGATGTCCTGTGGCCCTCCGCAAGTGACAA
TCGCGTCTTCTAAAACCTATTTATATACAATAGAGAGCTATATCTACATT
GTGGAGTTTATTTAATTTGACTTCGAGTTACGTCCGCAGGAGAAGGTCGC
AGCACTCCGTCGACCATGATCTTGTCTCTGGCCTAATGTCTATTTATATA
CATTGAGAGCTATATCTACATTGTGCAGTTTATCTAATTTGACTAATTTG
ATTTCGAGGCCGCTCGATGGCTTGTGGCCTTCGCGAGTGGCGATCTCGTT
TCTGCGAAATATAGTTTTTCACCTATTATAATGTACGAGTGGTACTTTTT
GGTTTTTGTTTTGAAGAGGGACGGGGACGATTTCGCTTCGCCGTAGGAGT
ACAGTGAAGTCACTCTATTTTGGTGGAGTGTCAGCTTTTAAGGCCGTGGG
ATGGAGCGGGACCTTTACTTCGCTCTACAGTACCCTCTTGTATTACTTCA
CAGACTCCTTTTGCGCCATACGGCAATCTCTTGTGTCGTTGTCGTGTGTG
AAGTGCACATACTACCAATGGGGAATTCAAACTCGGGAGGAATTCCGTAA
GTAAGCACCAGATTCAGCCTGAGTATGGAGATGAACAGGTTGACGCGAGA
CGGGACTGCCGAAACCGTCTCGCGAGACCAAATTCTCAGGCACGAACGCG
GACAGGGGAATATTCTTTTCGCTGTTCAGCTGAGCACGTGCAGGATTGGC
AACCTTACCCGGTTGATCCATACTCTTGCTACATGTGTGACCATACATAC
AGCGCTCTAACCCCGGTGCACACACCCGGTAAGGTGTCCATAAGAAAATA
TTTTTCCCTTTGAAAAAAAGCACAGTACTAGTAGATTCCACACACCATTA
TCGATGGCAGCGCACACTCTTTGTCGGGGTCCTAAGCCCCACAGGTTTGG
TCGGGTCTGTTTAACCCTCAAGGCGATGTTTATTTCCGTTTCCATCTATT
TAATATTTAATATTTAATAGAGCGAGGAGCGTCTCGCGGTACGAAAGAGT
CTCCAGGGGGAAGAGGAAGAAGAGGGAGCCAGCGGAGGGGCTCACGGGAG
ATTTCTCATGAAAATATTCCCGGATGTATGTGCATGGGATGAGCTTCGTT
TCTACTATTGAGCGTGTGTGCTCTCTACTAAGGAGCCCGATGTCAGTTTT
CGAGATCCGTAAGACACCCGTAAAATATAATGTGTTGAAGTGAGTGTTGC
TGAGACTCGCGGGGGCGTACTGCAGTCACCGATGATTATGGTGGCTGTCC
TATGTGAAGCAGCGCAAGCAGCACGGATCTGTCAACTGAAAAAAAATAGT
CTTTGCGAGGCCGTTAGTACCCAAAGAGTTAATTAAAAGTCACATTCCAT
TCAATCCAGGAAACTCTGCCTCGCACGGCGCAATATTGGTGATAATATTG
TAGCAATAGCATCACCAATATCAATATAATTAACAGTATAAAGTAAATCA
TAAATCGCGCGCACCGATGATGAGGCCGTGTCTTGGGACCTCTTTTAGAA
AGTTGTAAAAGTGAAATTGTGAAACGCGGGAAAAAATAAAAAGTTGCCGT
GAGATTGGATAGCGCACTGAGGGGACCATCGCGAGGTTATAGGTTACACC
ATTTTTTTTATCAATGTTATTTTCAAAATCTGGATGCCGGCTCCATAATC
GGCTCCCCCCCAAAAGGGCGAAAAAGCGCGGGGCAACTCTAATGATGTTG
ATGCTAATATCACTCACTACTAATAGCCGTAACGAAGTAACCAAGAGGAT
GAGAGATGAGATGCCCAAGGTATTAATAGGTGTTGCAGTATACACGTGCG
TGTAGTTCTATCTCTCACTTGAACGAGTCTCTGGATTGCGTTCGAGACGT
AGCCGAAATATAGACGAGAGCTCACATTGAAGTGCGTATCTCGATCCGTA
CGATAACGGGGCCCAAACTGTTGCGGCGCGCCTATTTACCGCCCATGTGT
GTTTTTGTCGAACCACCACCCAAGCCAAACAGCAAGACACTCGTTTTCTG
TTGTAGTTTTTTTAATTTCGGTTGGTCAACCACCACTTCCGGTGTGGCCT
ACTGGACCAATATCGCTAACGCTAACCCAGACTCTACTACCCCAGCTGAC
GCGTGGTCCCAATTCATAGTGATATAGTGATGGCTGGAGAAAGAACCAAA
AAGGACCAAAAAGGGGACAAAAGGGGAGGGGCTGCTGGGTAGTAGTTTGT
GCTTGGGTTGTGGTTCGACAAAAACACACATGTGTGGTAAATAGGCACGG
TCAAATTGTTGACCTCCCGGAGCAGGACGGATAAATATGAAACATACGCT
TCCTGCTCCCGCCAACTTCGTCGCAGAGAAAAGTACTGGTTCTGAGTATT
ATGGTTTTAGAAGAAAATAAAAAACTATGAAAACTGAACAAGCAACCTGG
TTATCTGTCTAATAGTATGGTACAGCACCCGTACCTCGTACCCCCCCCCC
CCCAAACCCGCTACTATTACCAAGTGTGCTAGCTTACGATGAAAGACCAT
GGATGCCGCCGAGACGTTCGCTGTCGCCATGATATCATAATATATATAAT
ATCATAATATAATCATATCAATAGCCTGAAGCGACAGAAAACAACGCCGG
CGGGCCATACCTTGTGACATGACGATCAAACTCCAATACTTGTATTAAGG
ACCAATAATAACTTGGCGAGACCCGACGATTGATCGTCATAATTGGTTAT
CAATCGCTCGGGTCTCTTTAAATAAGGAAACACGTGAACCCACTCAAAGG
TATTATAAATATTAACTGTACCGGGTGAACCCTTTCGGGCATCCACACCC
TTTTCGATTGCAATTGCTGAACACTTAACGTTATGACGTGATGACCAGTA
TTGAAAACAGGCAAGTGGTTGTGGTTGTCATCGAACCGCCCGAGTCTGTG
TCTCTAGTCTGTTTGAATATTAGTATCAAGAGTGTGCCTCCTGCATTCGA
TGCCTAGTGCCTCTTCTTTGAAAATCTTAACATCTTACTATTAATAGTAT
AATAGAGCCAATGCATCCACGCCTCCCTCCCCCGAGAATGTTTGACGTCG
TAAGGTTTTATACAAGTATTTGCAGTAGAGTGAACAATGAGCCTTGTCCT
TGCGAACAGTAGTAATGTATGTTGTTTAAAGAAAAACCAGAACGCGCCTA
TACCTTCTGAGCATCCTCCTGTCAGGAAAAAGAATGGCAAAACGTTTAGG
TGGGATCACAGGCTGCAAATACAAAACCTCTTCATGTCATTTAAACGGGT
TCCCCTATGGTAGTGACATTGAATCAACAGTATAATGTCGGGGAGCACCC
CTCCCCTTCGAAGCCGGGGAGTGTTGATCGTCGGGTTCCCGCCGACCAGG
CCATCCCCGCTCAACACCATGGAGCTGTGAAATTAACCACACACATCATG
CAAGATGATACCCTCTGTCCTAGAGAATATCTCAACGCCCCCTACTATCA
ATATTAATATATGCCGGGGAGCTCTTTGTCGGGTTTCTCACCAACCATAC
CATACCGGGCAAACACCCCCCTTACACCCATATTTTAGGGTGTGAAGGTG
TTCGGGCAACACGGATGGCCCCTGATGCTACTACTGAGAAGATACGGTAT
AAAAACAAAAGTAGGTTTAACTCGAGGCAAGCGGTCAGGCCAAACCCGTT
CACGAGGTAATGAGGCCGCCCAGGTATACGAACTGGTGGACCTGGTTGTA
TTTTTGGCCGGCTGCTGTGATCTCCAGCGCCGGTAGAGGTGGTGATGGTG
TCTCCCCCGGCTGCTGCGCCTTCTCCGGTGCCCGCATCAGGAGAATCCTG
TAGTGATATATAGGAATGTATAGTAATGATGTATCGCGATGTTTAGTAAT
GTTTGGTGATGTTTAGACAATGCCGGTCGACCCCGGTAGCTCAGTAGGCA
CCTCGTAACCTTCTGACACGTTGGGACGTGAGTTCGATCCCGGCAAACGG
GATTTTTCTCACTAAAAACTAAAAAACCAAAATAAAAATGCCCAACGGGT
GGAGGACGATTAATTCGTTAGTACACAAAATTCGACTTCACGGTCGACGA
GGGAAAGGAATGGCTGAATCCTTCTCGCGACAAAAATCAAGGCACGCACC
GCAGAAGGAAGGTAGATGAAAAATCCTGTGTGACCTTCCTCCTGTGTGAC
CCCGGCTGGTACGTCCAACGACTGGTTGTCCAGAATGGATGGGAAGAAAA
CACACACACACAACACACACACACAGACTAGTCCAGTAATGTACTGTAGA
AATGTATTATAATAATGTACACTATGTGTATTGATGGGTATAGTACAGTA
ATGCACCTTGATGGCGCCGCTCCTCGAAATTTCCTGTGTCTATATGTGTC
TCACTTTATCACAAGTATTGATTTTTTATTTTATCATCTAAAAAAAGGTT
TTAGTAAGACACGGCGGTCTGAGAAGCAGGGGCCTTTGTCTTTTAATGTT
TTATCATGAGCTTTTGACCTTTTTTTTTACTTGTAGTTAACGACTTGACG
TTTTAATTGTTTCTTGACTTTCCGCCTGGCAAACGTACATGGCCTCCGTG
TTACAGGCTTTCGCCGCTAAGCTGATAATATACATATACAGCAGTATATA
TATATCCATATGAGACGAACGCCTCTTCGAGATTTCCGGTGTAAAGCTCC
TTTCAATCAAGATCGGATTCATTAATGGCATATGCCGAAATGTCAGCTCG
CCGCCTGCTTTAGTGCAGAAGTGTTAAAAAAAAAGAGATGTCAGAATCCC
ACCGATCCTAAAAAAAAGACAAGTAACGCGAAAGCCAAGTCGTAGGGATC
AATAGCTCCAGATGAACAGGTTTTGGAGTGGGGATTGAAGTGGAATAATC
GCGCGCCCCAGGTGCGTGTACGGGATTCCCCGAGGCACGGCTAGATCTTA
GTCGGCAGCATGTTTCAAGCAATATGACTTATGTATCGGTGGGAATGAGT
TGACTGCTGTAACGTCATATCCTTTGAATGGGTACGACATAAAATAAGAA
AAGGCCGTTATGTCTATACTCGGAGAGCCTGCAATGTCGAGAAAATCAGG
AAATCGCGTTTTTTTTTTCTTCCCGCAGGGTCTCTTTGCTGCTTGCGAAT
AACTTTTATAAGAGTTACGCTTTCGGAGGTTCATAGCCACAATAAATAAG
AAGGAACATTTTTTAAGAGGCCATCCGATGGTTATCGCCTTCAAAATCGT
GGGCAAACGAGGAGGTCAGCAGCATCTGACCCAGGGAAAACGCGTGTGCT
CTCTTTTATAAGTTTCTACAGCATCTCGCTATCAAAAGTGGGAGCTTCCA
CTTCTACTGTATCCAAGTTACTACTATTAAATGGTATTATTAGGCAAAAG
CTCCCTACTTTTAGGGGGGGGGGGGGGATGAAAAAAACGTTCGACAATAT
TAGTTTTTGATGTTACAACTACCATTGTTTTGTAGTACTAAATAGCTATA
TTAAAGCGTTACGAACCGCTGATGTTTAATTGTTTAATTATTAACCAAAA
CTCGTGAGACGAGAAAGATGCGGAGGGATGCATTTCACATGTCATGTACT
TGTGTATCTGTTAGTTAGTGTAAGGCCAACCGCTATGGGACCACAAAAAT
ACAAAAATGAAACGCAAAAAAGTGTTGATTTCCGCGGCAATTACTTCTTT
ATTTTCTTTTTTTTTTATATGTACAAAAATGAGATGGAGGTCCGTGGAAT
ACTGGCCATCCAAGTCTCTATAATAGCCCCTCGTTTGAAGTTGAAAATGG
GAGGCGAGGCACCCCATCATCGGGTAGGGTAGCAATCATATCATAGCAAC
TAACAACGCCATCAGCCAGACCAGACCACAGCGATGCCGGGTACAGTGGA
CCAGTGCTCAATCACGCTTGCTCCGACGGCCACCGCAGTCGCGATCTCTT
GATCTTCATCGGGTATGTTTTCGCCATCATCCATTCCATCCATTCCGTCC
ACACACTATTAATAGTGGTCAGGTAGTTTACAGGTCGGGTACAATCGTAG
TGCTCGTCCGCGGCTGCTACGACGGCCATGGCAGTCATAGTTGCTGTTAT
TTGGTCCTCCTTGGGCACACATCGTCCTCAAACGCTGGTTTTGTACAGTG
CTAGCAAAGGCATGAGCAGTGCCGTCGATCTGTGTTTTTTCTATGGCCAC
CTATTCATACAGAAATGACCTCATTTACGTAGGTGGCCACAAAAAAAACA
CCGACCTACATTTTTTTTCGGGGCCATTTCCGTCGTATTTCTGCAGGTGG
CCACAGAAAAAACGCCGACTTATAATTTTTTTTCGAGGCCATTTCCGTTT
TTTTTTCGCTCCCATTCCGCGCTTCCCACAAAAATGACCTACGGAAATTT
GTCCCTTTTTGTATTTTTGTAGTCCCATAGCGGTTGGACTCAGTAGTAAA
GTACGGATTTTGTGCAGTTGTATCTGTAAGTGTAAGTGTCTCCGAATGTG
GGGCGGCGAGATATGAATGGAAGGTGGGAAGACAAGCTGTTTTGACACAC
TATACTGTTTTATAACTATATTAATAGTATAGTAATGAATACTGTCTGGT
CTGTGGTATTAATATTTTACGTACTTGTAGTATATATGTATGTGTGTATG
GTCATAACATATAGAAAGGGTAAGGATCAACCGGGTAAGGCTGCCAGTCC
TGCTCGTGGTCAGCTGGAGAGGCAAAATTAATAATTCCCTGTCCCCGTTA
GCGCCTGAAAATTTGGTCTCGCGAGAGGGGTTCGGCAGTCCCGTCCCGCG
TCAGCCTGCTCATCCCCATACCCTATTATTTGTTAATAGGCTGAGTCTGG
TGTTCATAGCAGATAATTGAAACCGGGAAGCTGGGGAGACATGTATTCGT
TTAAAGAAAAATATAAAGGCACCTGAAGCTATTATTAACACGGCAACCCA
TAAGGCACGATAACCGATAACCTATACGCCGTAGATCATACCTGGTACTC
CGGTGGAGTATGTTGTTGCAAGCCTACCCGATACGATACGGTAAACTATA
TGGTACGGTATCCTCGCGACGGCATAGAGCCAGAGGACCCTCTCCCTTAT
GACGCGTTGCAGGACAGTCGGTTATTGAGTTCAAGCGGCCAAGGAAAGAA
TTCCACAGTAGCGTTGGGTTACTCGAATCGATCTCACCGGTACTGTCGGT
GTAAATCTATATATTTTTATAACCAGGCGTGCTTGCTTGCCTGGGGGGGG
GGGGTAGCGCGTCGAATTTGCTTGTTTGTTTCTGGACACGGCTACTCGTA
TCTCTTGATCGAATCTGCCGCTGTATAATATCTTGTCGTGATCTGTGCCC
GCGTGCACGCTATATACGTGCGAGCAGGCGGCTTCGGCGAGGCCGCATCG
GGGCAAGTGCACTTCGCGGAGATCTCCACCCCAATCTTAGAAAAGGTCAT
CCAGTTTGTTTACTACAAGGTACGCTACTATTTAATAGTAGCCATAGCGT
TGCTGAAGGATCAGCGCGAAGGCGTACACCACCCGTTGCCGCTGCATGCA
CGCATCGGCTAATGACTAATGAATCCTGCCCCCCCCCCCCGTCGAGCCGT
TCGCCGAAATCCCGCCAAACGGTCTTGAGTGTGACGGACGGGTGTTGAAA
TGCCGTGTCTGGAATGGAAAAGTGTGGCGATTTTAAACGCCCGGTATCAT
GTGCGTCGAAGCCTGAAGATGGGACCATGTATTTGCGCGTGTGTTTTCTT
TTGCTCGCTTTTTTTTTCTTCCCCGGTATATCAGGTGCGATACACAAACA
GTGCCTCTCGGATTCCAGAATTCCACATCGAGCCGGAGCTGGCGCTGGAG
TTGCTCATGGCCGCAAACTTTTTAGACTGCTGA back to topCoding sequence (CDS) from alignment at F-serratus_M_contig88:250200..258582- >mRNA_F-serratus_M_contig88.20152.1 ID=mRNA_F-serratus_M_contig88.20152.1|Name=mRNA_F-serratus_M_contig88.20152.1|organism=Fucus serratus male|type=CDS|length=582bp|location=Sequence derived from alignment at F-serratus_M_contig88:250200..258582- (Fucus serratus male)
CAGGAATTTGTGAAGCTTGTGAGCGCCGAGGGGGCGGAGTTCTGGGTGGA
TCGCAAGTGCGCCATGGTGTCCGGAACCATCAAAGCAATGCTCAGCGCAG
GAATTTGTGAAGCTTGTGAGCGCCGAGGGGGCGGAGTTCTGGGTGGATCG
CAAGTGCGCCATGGTGTCCGGAACCATCAAAGCAATGCTCAGCGCAGGCG
GCTTCGGCGAGGCCGCATCGGGGCAAGTGCACTTCGCGGAGATCTCCACC
CCAATCTTAGAAAAGGTCATCCAGTTTGTTTACTACAAGCAGGCGGCTTC
GGCGAGGCCGCATCGGGGCAAGTGCACTTCGCGGAGATCTCCACCCCAAT
CTTAGAAAAGGTCATCCAGTTTGTTTACTACAAGGTGCGATACACAAACA
GTGCCTCTCGGATTCCAGAATTCCACATCGAGCCGGAGCTGGCGCTGGAG
TTGCTCATGGCCGCAAACTTTTTAGACTGCTGAGTGCGATACACAAACAG
TGCCTCTCGGATTCCAGAATTCCACATCGAGCCGGAGCTGGCGCTGGAGT
TGCTCATGGCCGCAAACTTTTTAGACTGCTGA back to top
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