mRNA_F-serratus_M_contig864.20018.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig864.20018.1 vs. uniprot
Match: D8LQI5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQI5_ECTSI) HSP 1 Score: 185 bits (469), Expect = 5.180e-55 Identity = 91/118 (77.12%), Postives = 103/118 (87.29%), Query Frame = 1
Query: 274 MPLAD-AASKLLPKESADGSVKFSNPGVGDFQVFDALVKYPGAFELKIIGVDDESFVGDIRNVVAGCLTKGEEHLLKCTTREKGKYVSISLKVYVESSTQLYKCYEVINEDSRVKFKF 624
MPLAD AASKLL KE DGS KF NP VGDFQV DALV+YPG+F+LKIIGVDD++FV DIR VAGCLT GE++++KC+TREKGKY SI+LKV VE+STQLYKCYEVINED RVKFKF
Sbjct: 1 MPLADKAASKLLAKEGPDGSSKFDNPAVGDFQVLDALVEYPGSFDLKIIGVDDDTFVSDIRKAVAGCLTNGEDNVIKCSTREKGKYTSITLKVRVENSTQLYKCYEVINEDKRVKFKF 118
BLAST of mRNA_F-serratus_M_contig864.20018.1 vs. uniprot
Match: D7FUE3_ECTSI (UPF0250 protein NE1487 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FUE3_ECTSI) HSP 1 Score: 74.3 bits (181), Expect = 3.750e-12 Identity = 39/89 (43.82%), Postives = 60/89 (67.42%), Query Frame = 1
Query: 364 QVFDALVKYPGAFELKIIGVDDESFVGDIRNVVAGCLTKGEEHLLKCTTRE--KGKYVSISLKVYVESSTQLYKCYEVINEDSRVKFKF 624
+ F+ LV YP FE+K+IG+++ SF DI V+ + + E ++ T R+ G+Y SI++ V+++T LYKCYE+I+ED RVKFKF
Sbjct: 93 RAFEYLVDYPCEFEIKVIGINEGSFADDIAATVSA-VCEVETSDVRFTVRDTTSGRYQSITVHAPVKNATMLYKCYELIDEDPRVKFKF 180
BLAST of mRNA_F-serratus_M_contig864.20018.1 vs. uniprot
Match: A0A6U1NFE4_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1NFE4_9STRA) HSP 1 Score: 74.3 bits (181), Expect = 4.240e-12 Identity = 36/87 (41.38%), Postives = 57/87 (65.52%), Query Frame = 1
Query: 364 QVFDALVKYPGAFELKIIGVDDESFVGDIRNVVAGCLTKGEEHLLKCTTREKGKYVSISLKVYVESSTQLYKCYEVINEDSRVKFKF 624
+VF+ V+YP F++K+IGV F D+ + VA C + +K TR++GKY S+S+ V+ ++Q+YKCYE +++D RV FKF
Sbjct: 100 RVFETHVEYPCEFQIKVIGVRQGQFEQDMVDKVARCCGVEDPTQIKYKTRDQGKYRSVSIFAPVQMASQVYKCYEELDKDERVLFKF 186
BLAST of mRNA_F-serratus_M_contig864.20018.1 vs. uniprot
Match: A0A7S1BKS9_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BKS9_9STRA) HSP 1 Score: 74.7 bits (182), Expect = 1.660e-11 Identity = 39/87 (44.83%), Postives = 57/87 (65.52%), Query Frame = 1
Query: 364 QVFDALVKYPGAFELKIIGVDDESFVGDIRNVVAGCLTKGEEHLLKCTTREKGKYVSISLKVYVESSTQLYKCYEVINEDSRVKFKF 624
+VF++LV+YP F +KI+G + FV D+ ++VA G + + REKGK+ SI+++ VE++ LYK YEVI D RVKFKF
Sbjct: 210 RVFESLVEYPCTFPIKIVGAKEGQFVTDMVDLVAETCNVGRTDVTY-SEREKGKWTSITVQAPVENAQMLYKVYEVIGRDPRVKFKF 295
BLAST of mRNA_F-serratus_M_contig864.20018.1 vs. uniprot
Match: A0A7S2GUM6_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GUM6_9STRA) HSP 1 Score: 69.3 bits (168), Expect = 1.110e-10 Identity = 35/92 (38.04%), Postives = 58/92 (63.04%), Query Frame = 1
Query: 349 GVGDFQVFDALVKYPGAFELKIIGVDDESFVGDIRNVVAGCLTKGEEHLLKCTTREKGKYVSISLKVYVESSTQLYKCYEVINEDSRVKFKF 624
G + +VF+ LV YP F+LK+IG + F D+ +++ +T E ++K T+R+ KY+S+S++ V ++ LY+CY + EDSRVK F
Sbjct: 57 GETESRVFERLVDYPCEFQLKVIGRKEGEFEADMIKIISQ-VTGVEAEVIKFTSRDTPKYLSVSIQAPVANAEMLYECYGALGEDSRVKAAF 147
BLAST of mRNA_F-serratus_M_contig864.20018.1 vs. uniprot
Match: M2XRZ9_GALSU (Uncharacterized protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XRZ9_GALSU) HSP 1 Score: 68.6 bits (166), Expect = 6.370e-10 Identity = 38/90 (42.22%), Postives = 54/90 (60.00%), Query Frame = 1
Query: 355 GDFQVFDALVKYPGAFELKIIGVDDESFVGDIRNVVAGCLTKGEEHLLKCTTREKGKYVSISLKVYVESSTQLYKCYEVINEDSRVKFKF 624
G ++ D LV +P F+ KIIG+ +FV DI + VA L ++ + +TR+KGKY SI++ SS Q+Y Y I+ D RVKFKF
Sbjct: 115 GQRRLIDELVDFPCKFQFKIIGIRQGNFVEDIVDCVAEVLQIDPSYM-EVSTRDKGKYRSITIDAPCNSSEQVYSIYAAIDRDPRVKFKF 203
BLAST of mRNA_F-serratus_M_contig864.20018.1 vs. uniprot
Match: A0A836CJU5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJU5_9STRA) HSP 1 Score: 66.2 bits (160), Expect = 1.440e-9 Identity = 41/114 (35.96%), Postives = 63/114 (55.26%), Query Frame = 1
Query: 289 AASKLLPKESADGSVKFSNPGVGDFQVFDALVKYPGAFELKIIGVDDESFVGDIRNVVAGCLTKGEEHLLKCTTRE--KGKYVSISLKVYVESSTQLYKCYEVINEDSRVKFKF 624
A S +L ++ K NP + F+ LV YP F++K +G + + D+ +V G + + E ++ T R+ GKY S++L V +S LYKCYEVI +D RV+FKF
Sbjct: 42 ALSMILRTDADREGRKMGNP-----RAFEYLVDYPCKFQIKAVGHNKGNLADDLAALV-GSVCEVEPAAVEYTVRDTDSGKYRSVTLMAPVSNSDMLYKCYEVIGQDERVRFKF 149
BLAST of mRNA_F-serratus_M_contig864.20018.1 vs. uniprot
Match: A0A7S2SR06_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SR06_9STRA) HSP 1 Score: 61.6 bits (148), Expect = 9.300e-8 Identity = 33/88 (37.50%), Postives = 55/88 (62.50%), Query Frame = 1
Query: 367 VFDALVKYPGAFELKIIGVDDESFVGDIRNVVAGCLTKGEEHLLKCTTRE--KGKYVSISLKVYVESSTQLYKCYEVINEDSRVKFKF 624
VF+ ++ YP FE+K+IG + F D+ +++ +T + +TRE K+ S+S+K V++S LY+CYE +++D RVKFKF
Sbjct: 84 VFERMLDYPCEFEIKVIGRLEGEFARDMVAIIS-TVTGVPAMDIAFSTRETPNNKFTSVSIKATVQTSDMLYQCYEELDKDPRVKFKF 170
BLAST of mRNA_F-serratus_M_contig864.20018.1 vs. uniprot
Match: A0A7S4DS48_9EUKA (Hypothetical protein n=3 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S4DS48_9EUKA) HSP 1 Score: 57.8 bits (138), Expect = 8.380e-6 Identity = 29/85 (34.12%), Postives = 51/85 (60.00%), Query Frame = 1
Query: 364 QVFDALVKYPGAFELKIIGVDDESFVGDIRNVVAGCLTKGEEHLLKCTTREKGKYVSISLKVYVESSTQLYKCYEVINEDSRVKF 618
+VFD L++YP E+KI+G + ++R ++ G +T + L ++REKGK+VS+S+ V+SS LY CY + + ++
Sbjct: 210 RVFD-LLEYPCDHEIKIVGAKESDIEDNVRAIIGG-ITGADPKSLVTSSREKGKWVSVSVMAPVQSSDMLYDCYSKLQAERSFRY 292 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig864.20018.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig864.20018.1 >prot_F-serratus_M_contig864.20018.1 ID=prot_F-serratus_M_contig864.20018.1|Name=mRNA_F-serratus_M_contig864.20018.1|organism=Fucus serratus male|type=polypeptide|length=205bp MMQKGRAASATFLMLSTISRSVPAFLLRSASPRVGVVRSDQRAIGQWPATback to top mRNA from alignment at F-serratus_M_contig864:174804..182948- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig864.20018.1 ID=mRNA_F-serratus_M_contig864.20018.1|Name=mRNA_F-serratus_M_contig864.20018.1|organism=Fucus serratus male|type=mRNA|length=8145bp|location=Sequence derived from alignment at F-serratus_M_contig864:174804..182948- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig864:174804..182948- >mRNA_F-serratus_M_contig864.20018.1 ID=mRNA_F-serratus_M_contig864.20018.1|Name=mRNA_F-serratus_M_contig864.20018.1|organism=Fucus serratus male|type=CDS|length=1230bp|location=Sequence derived from alignment at F-serratus_M_contig864:174804..182948- (Fucus serratus male)back to top |