mRNA_F-serratus_M_contig862.20006.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig862.20006.1 vs. uniprot
Match: D8LRM4_ECTSI (Mannuronan C-5-epimerase N-terminal n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRM4_ECTSI) HSP 1 Score: 541 bits (1393), Expect = 5.160e-179 Identity = 278/455 (61.10%), Postives = 332/455 (72.97%), Query Frame = 1
Query: 88 EDGGCGTMTDLYQSRVEKDGWTPKGPIYILDDNDDIMYSPTSVTGKWLLTSQLFVLRGSVFYCRGTSIGGDCDELRIQSTGSTDFHEVRGHGGSLYFEKTLVTSWDTPNKSPQEDYEGGRSFINCVSEYESDETCEGQPKNDYGECRMDIIDSEMGYLGWFDSESYGLTWKVRGFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGGSQAAGIFLHRSSDSCEVYDNNVHDMQDAGMAILESFDADIHDNSFTNVKYGIRISLGGGNNNVYDNVFDQCSTYGLYTYQGSDAP-EASSDGRPSDNSFYDNTISNTETGVKIKEGDNTIITGNTFTGTSLLEFNDAEDTVWTSNTFEDADSDLCYKNIAS--------STFESIDGTIPSL 1425
E GC T+TDLY R+E DG + KGPI+ LDD+ + + +P ++ KWLLT++L + G+VFYCRG+SIGGDCDELRIQSTG TDFHEVR HGGS+YFE T+VTSWDTPNK+PQ Y GGRSF+NCVSE + E C GQ +N+ GECRMDII+SE+GYLG+FDSESYGLTWKVRGFC D SNP+VFDTTNVYG++ SDIHH YYG YSYGHQGGVW NN+MHDNHQYGFDPHDDSDYLT +GG AAGIFLHRSSD V+DN VHDMQDAGMA+LES +ADI++N F++VK+GIR+SLG N+V++N+F+ ST GLYTYQGSD P + SDGRPSDN F +N I N GVKIKEGD+T+IT N FTGTS LEF DA++T W NT +C KNI S STF+ +P+L
Sbjct: 83 EGEGCFTITDLYNFRLESDG-SAKGPIFNLDDSYNTVLNPKVLSNKWLLTAELHITGGAVFYCRGSSIGGDCDELRIQSTGPTDFHEVRAHGGSMYFESTIVTSWDTPNKTPQATYVGGRSFLNCVSEKLTGEVCVGQAQNEMGECRMDIINSEIGYLGYFDSESYGLTWKVRGFCKDLSNPDVFDTTNVYGNLIGSDIHHNYYGQYSYGHQGGVWHNNQMHDNHQYGFDPHDDSDYLTSIIASKRCNNVQIYNNEVY------------DGGPFAAGIFLHRSSDYAIVHDNVVHDMQDAGMAMLESMNADIYNNRFSSVKFGIRLSLGSSENHVHENLFEDVSTQGLYTYQGSDEPTDGVSDGRPSDNLFENNRILNVTKGVKIKEGDDTVITDNVFTGTSELEFFDAQNTRWKGNTLPQG---VCIKNIHSDDGIDIELSTFDRRTAGLPTL 521
BLAST of mRNA_F-serratus_M_contig862.20006.1 vs. uniprot
Match: D8LC73_ECTSI (Mannuronan C-5-epimerase 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC73_ECTSI) HSP 1 Score: 530 bits (1364), Expect = 1.030e-169 Identity = 258/439 (58.77%), Postives = 311/439 (70.84%), Query Frame = 1
Query: 34 KASIRWASGTGINGRMYLEDGGCGTMTDLYQSRVEKDGWTPKGPIYILDDNDDIMYSPTSVTGKWLLTSQLFVLRGSVFYCRGTSIGGDCDELRIQSTGSTDFHEVRGHGGSLYFEKTLVTSWDTPNKSPQEDYEGGRSFINCVSEYESDETCEGQPKNDYGECRMDIIDSEMGYLGWFDSESYGLTWKVRGFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGGSQAAGIFLHRSSDSCEVYDNNVHDMQDAGMAILESFDADIHDNSFTNVKYGIRISLGGGNNNVYDNVFDQCSTYGLYTYQGSDAPEASSDGRPSDNSFYDNTISNTETGVKIKEGDNTIITGNTFTGTSLLEFNDAEDTVWTSNTFED 1350
+ S R+A+ +G+ GR+Y E GC TMTDLY R ++ + KGP+Y+LDD+ + P+ +T WLL ++L++ G VFYC+GTS GGDC++LRIQSTGS DFHEVRGHGGSLYFE T+VTSWDTPNK PQE YE GRSF+NCVSE + + CEG KN+ GECRMDII+SE+ YLG+FDSESYG+TWKVRGFC D SNPEVF+ TNVYGD+ SDIHH+YYG YSYGHQGGVWTNNKMHDN QYGFDPHDDSDYLTIA +GG+ AAGIFLHRSSD V+DN + +MQDAG+A+LESFDA I+ N KYGIR+SLG GNN VY N F S YGLYTY+GSD P+ S DGRPS N N + + GVKIKEGD+ NTF EF ++ +T+W+ N D
Sbjct: 427 RPSFRYAASSGVAGRLYAEGEGCFTMTDLYNFRGTENDGSSKGPVYMLDDDGTKLDIPSGITNNWLLAAELYITGGGVFYCKGTSAGGDCNQLRIQSTGSDDFHEVRGHGGSLYFEDTIVTSWDTPNKEPQETYENGRSFLNCVSEKLTGDDCEGNAKNEMGECRMDIINSEIAYLGYFDSESYGMTWKVRGFCKDLSNPEVFELTNVYGDLTGSDIHHLYYGHYSYGHQGGVWTNNKMHDNWQYGFDPHDDSDYLTIAYNEVYNNVNHGIIASKRCNNVKIFENEVRDGGAAAAGIFLHRSSDGAAVFDNTITNMQDAGIAMLESFDAQIYGNIINGAKYGIRMSLGSGNNEVYQNSFTDISQYGLYTYEGSDEPDVS-DGRPSGNVLALNLVEDCPIGVKIKEGDDNEFYQNTFINVDAFEFPESTNTMWSGNDIGD 864
BLAST of mRNA_F-serratus_M_contig862.20006.1 vs. uniprot
Match: A0A6H5JGU8_9PHAE (MEP1 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGU8_9PHAE) HSP 1 Score: 505 bits (1300), Expect = 5.340e-166 Identity = 259/462 (56.06%), Postives = 316/462 (68.40%), Query Frame = 1
Query: 88 EDGGCGTMTDLYQSRVEKDGWTPKGPIYILDDNDDIMYSPTSVTGKWLLTSQLFVLRGSVFYCRGTSIGGDCDELRIQSTGSTDFHEVRGHGGSLYFEKTLVTSWDTPNKSPQEDYEGGRSFINCVSEYESDETCEGQPKNDYGECRMDIIDSEMGYLGWFDSESYGLTWKVR---------GFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGGSQAAGIFLHRSSDSCEVYDNNVHDMQDAGMAILESFDADIHDNSFTNVKYGIRISLGGGNNNVYDNVFDQCSTYGLYTYQGSDAPEASSDGRPSDNSFYDNTISNTETGVKIKEGDNTIITGNTFTGTSLLEFNDAEDTVWTSNTFEDADSDLCYKNIAS--------STFESIDGTIPS 1422
E GC T+TDLY R ++ + KGP+Y+LD + + +PTSVT KWLL ++L+V G++FYC G+ GGDCDELRIQSTG D++EVRGHGGS+YF T+VTSWDTPNK PQE YEGGRSF+NCVSE + ETC+G KND GECRMDII+SEMGY+G+FDSESYGLTWKVR GFC D SNP+VF+TTNVYGDIKNSDIHHMYYG YSYGHQGGVWTNN+MHDNHQY +A +GG A GIFLHRSSD+ EVY N + +M DAG+A+LESF+ADIHDN V++GIR+SLG G N+VYDN F+ CS +GLYTY GSD P+ S+ GRP+ N+F +N ++N+ GVK K DN ++T N FTGT LEF DA+ T W+ N+ S +C NI S STF S G +PS
Sbjct: 18 ESEGCFTLTDLYNFRGTENDGSSKGPLYMLDGSGSKITAPTSVTKKWLLEAELYVTNGAIFYCIGSEEGGDCDELRIQSTGPDDWYEVRGHGGSMYFSHTVVTSWDTPNKQPQETYEGGRSFLNCVSEKLTGETCDGMAKNDMGECRMDIINSEMGYMGFFDSESYGLTWKVRRQAGRGVVRGFCKDLSNPDVFETTNVYGDIKNSDIHHMYYGHYSYGHQGGVWTNNEMHDNHQY------------VANNKVYNNYNHGIIASKRCNNVKIYDNQVSDGGPDAVGIFLHRSSDNAEVYGNKIWNMPDAGIALLESFNADIHDNEIDGVQFGIRMSLGSGGNSVYDNEFNDCSDWGLYTYMGSDEPDVSN-GRPNGNTFNNNKVTNSAGGVKFKNSDNIVVTNNEFTGTEELEFYDAQATTWSGNSLP---SGVCIDNITSDDGNSVPPSTFSSSSG-VPS 462
BLAST of mRNA_F-serratus_M_contig862.20006.1 vs. uniprot
Match: D7FRR8_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRR8_ECTSI) HSP 1 Score: 481 bits (1238), Expect = 4.940e-157 Identity = 246/449 (54.79%), Postives = 304/449 (67.71%), Query Frame = 1
Query: 88 EDGGCGTMTDLYQSRVEKDGWTPKGPIYILDDNDDIMYSPTSVTGKWLLTSQLFVLRGSVFYCRGTSIGGDCDELRIQSTGSTDFHEVRGHGGSLYFEKTLVTSWDTPNKSPQEDYEGGRSFINCVSEY-ESDETCEGQPKNDYGECRMDIIDSEMGYLGWFDSESYGLTWKVRGFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGGSQAAGIFLHRSSDSCEVYDNNVHDMQDAGMAILESFDADIHDNSFTNVKYGIRISLGGGNNNVYDNVFDQCSTYGLYTYQGSDAPEASSDGRPSDNSFYDNTISNTETGVKIKEGDNTIITGNTFTGTSLLEFNDAEDTVWTSNTFEDADSDLCYKNIAS-STFESIDGTIPSLC 1428
+ GGC T++DLY + + KGP+++LD ND + + T+ TGKWLLT+ LFV G+ YCRG +GG+C ELRI+ST +DF E+RGHGG+LYFE T+VTSWD + PQE Y+ GRSFI CVSE ++TC N+ GECRMDIIDSEMGYLG+ SE+YG+TWKVRGFC+D SNP+VFD NVYGD+K SDIHHMYYGMYS+GHQGGVWTNN MHDNHQYGFDPHDDSDYL IA +GG+ AAGIFLHRS D EVY N + +M DAG+A+LE+ DIHDN ++GIR+ LG NN V+DNVF G++TY GSD P GRP DN FY+NTI TETGVKIKE DN IT N F+GT+ +EFN+A D VW+ N+ ++ C ++I + STF G +P C
Sbjct: 7 DGGGCFTLSDLYAWQGFYNNGNSKGPVFVLDSNDRVDETATTTTGKWLLTADLFVTGGATLYCRGKGVGGNCAELRIRSTSGSDFFEIRGHGGNLYFEDTIVTSWDVDGRKPQETYKDGRSFIRCVSEVLTGEDTC---AINNMGECRMDIIDSEMGYLGYDASEAYGITWKVRGFCSDLSNPDVFDDVNVYGDMKGSDIHHMYYGMYSFGHQGGVWTNNLMHDNHQYGFDPHDDSDYLIIAGNKVYNNVNHGIIASKRCNNVKIYDNEVYDGGADAAGIFLHRSGDDSEVYGNTITNMGDAGIAMLETSGCDIHDNQVDGGEFGIRVHLGSSNNKVHDNVFKNIWNVGMFTYVGSDEPWVGG-GRPCDNEFYNNTIQATETGVKIKESDNISITNNAFSGTTEIEFNNAIDIVWSGNSIP---TNTCLEDIDNNSTFTGSSG-LPLEC 447
BLAST of mRNA_F-serratus_M_contig862.20006.1 vs. uniprot
Match: A0A6H5KWQ2_9PHAE (MEP2 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWQ2_9PHAE) HSP 1 Score: 436 bits (1120), Expect = 7.000e-141 Identity = 214/347 (61.67%), Postives = 250/347 (72.05%), Query Frame = 1
Query: 109 MTDLYQSR-VEKDGWTPKGPIYILDDNDDIMYSPTSVTGKWLLTSQLFVLRGSVFYCRGTSIGGDCDELRIQSTGSTDFHEVRGHGGSLYFEKTLVTSWDTPNKSPQEDYEGGRSFINCVSEYESDETCEGQPKNDYGECRMDIIDSEMGYLGWFDSESYGLTWK--------VRGFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGGSQAAGIFLHRSSDSCEVYDNNVHDMQDAGMAILESFDADIHDNSFTNVKYGIRISLGGGNNNVYDNVFDQCS 1122
MTDLY R EKDG + KGP+Y+LDD+ + P+ +T WLL ++L++ G VFYC+GTS GGDC++LRIQSTGS DFHEVRGHGGSLYFE T+VTSWDTPNK PQE YEGGRSF+NCVSE + + CEG KN+ GECRMDII+SE+ YLG+FDSESYG+TWK VRGFC D SNPEVFD TNVYGD+ SDIHH+YYG YSYGHQGGVWTNNKMHDN QYGFDPHDDSDYLT +GG+ A GIFLHRSSD V+DN + +MQDAG+A+LE+FDA I+ N+ KYGIR+SLG GNN VY N F S
Sbjct: 1 MTDLYNFRGTEKDG-SSKGPVYMLDDDGTKLDIPSGITNNWLLAAELYITGGGVFYCKGTSAGGDCNQLRIQSTGSDDFHEVRGHGGSLYFEDTIVTSWDTPNKEPQETYEGGRSFLNCVSEKLTGDDCEGNAKNEMGECRMDIINSEIAYLGYFDSESYGMTWKARLTRGFPVRGFCKDLSNPEVFDLTNVYGDLIGSDIHHLYYGHYSYGHQGGVWTNNKMHDNWQYGFDPHDDSDYLTRIIASKRCNNVKIFENEVR------------DGGAAAVGIFLHRSSDDAAVFDNTITNMQDAGIALLEAFDAQIYGNTINGAKYGIRMSLGSGNNVVYQNSFTDIS 334
BLAST of mRNA_F-serratus_M_contig862.20006.1 vs. uniprot
Match: D7FIU4_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIU4_ECTSI) HSP 1 Score: 422 bits (1085), Expect = 1.620e-135 Identity = 239/425 (56.24%), Postives = 281/425 (66.12%), Query Frame = 1
Query: 172 ILDDNDDIMYSPTSVTGKWLLTSQLFVLRGSVFYCRGTSIGGDCDELRIQSTGSTDFHEVRGHGGSLYFEKTLVTSWDTPNKSPQEDYEGGRSFINCVSEYESDETCEGQPKNDYGECRMDIIDSEMGYLGWFDSESYGLTWKVRGFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGGSQAAGIFLHRSSDSCEVYDNNVHDMQDAGMAILESFDADIHDNSFTNVKYGIRISLGGGNNNVYDNVFDQCSTYGLYTYQGSDAPEASSDGRPSDNSFYDNTISNTETGVKIKEGDNTIITGNTFTGTSLLEFNDAEDTVWTSNTFEDADSDLCYKNIAS--------STFESIDGTIPS 1422
+LDD+ + + SPTSVT KWLL S+L+V G++FYC G+ GGDCDELRIQSTG D++EVRGHGGS+YF T+VTSWDTPNK PQE YEGGRSF+NCVSE + ETC+G+ KND GECRMDII+SEMGY+G+FD+ESYGLTWKVRGFC D SNP+VF+TTNVYGDIKNS+IHHMYYGMYSYGHQGGVWTNN+MHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXX +GG +A GIFLHRSSD+ EVY G DAP+ S+ GRP+ N+F +N I+NT GVKIK DN +I+ N FTGT LEF DA+ T W+ N+ S +C N+ S STF S G +PS
Sbjct: 1 MLDDSGNKITSPTSVTKKWLLESELYVTDGAIFYCIGSEEGGDCDELRIQSTGPDDWYEVRGHGGSMYFSHTVVTSWDTPNKKPQETYEGGRSFLNCVSEKLTGETCDGKAKNDEGECRMDIINSEMGYMGFFDAESYGLTWKVRGFCKDLSNPDVFETTNVYGDIKNSNIHHMYYGMYSYGHQGGVWTNNEMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXASKRCNNVQIYNNEVSDGGPEAVGIFLHRSSDNAEVYG-------------------------------------------------------GXXXXXXXDAPDVSN-GRPNGNTFNNNKITNTAGGVKIKNSDNIVISNNDFTGTEELEFFDAQATTWSDNSLP---SGVCIDNVTSDDGNSVPPSTFSSSSG-VPS 365
BLAST of mRNA_F-serratus_M_contig862.20006.1 vs. uniprot
Match: A0A6H5JNF5_9PHAE (MEP13 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNF5_9PHAE) HSP 1 Score: 423 bits (1088), Expect = 1.210e-129 Identity = 229/459 (49.89%), Postives = 289/459 (62.96%), Query Frame = 1
Query: 73 GRMYLEDGGCGTMTDLYQSRVEKDGWTPKGPIYILDDNDDIMYSPTSVTGKWLLTSQLFVLRGSVFYCRGTSIGGDCDELRIQSTGSTDFHEVRGHGGSLYFEKTLVTSWDTPNKSPQEDYEGGRSFINCVSEYESD--ETCEGQPKNDYGECRMDIIDSEMGYLGWFDSESYGLTWKVRGFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGGSQAAGIFLHRSSDSCEVYDNNVHDMQDAGMAILESFDADIHDNSFTNVKYGIRISLGGGNNNVYDNVFDQCSTYGLYTYQGSDAPEASSD--GRPSDNSFYDNTISNTETGVKIKEGDNTIITGNTFTGTSLLE---FNDAEDTVWTSNTFEDADSDLCYKNIASSTFESIDGTIPSLC 1428
G+ Y+ GGC T+TD+Y ++ G GP+++LD ND+++ S TG WLL + V GS+ G GGD LRIQSTGS D++E+RGHGGSL F T VTSWDT K +Y+ RSFI CVSE +D +TC+G N GECRMDII SEMG +G+ +ESYG++WKVRG+C++ NPEVF+ T V GDI +SDI+ MYYG YS+GH GG+WT NKMHDN QYGFDPHDDSD L IA +GG A GIFLHRSSD CEV+ N V+DM+DAGMAI+ES A IHDN+FTNVKYGIR+S+G N V +N F +C YG+YTYQG+D PEAS D G DN+F+ NT+ E GVKI++ + + T N F S E F D ED VWT+N D D+C K + + ++P LC
Sbjct: 398 GKNYIRGGGCATLTDIYTAQG---GHNDDGPLFVLDSNDNVVGG--SPTGYWLLMRDIHVEEGSLLQVHGPDAGGDARVLRIQSTGSRDYYEIRGHGGSLSFMDTKVTSWDTDEKKVNTNYKKERSFIRCVSEELADKPDTCDGHAVNHMGECRMDIIRSEMGEMGYDAAESYGISWKVRGYCSEDPNPEVFERTRVRGDIIDSDIYGMYYGHYSFGHDGGIWTGNKMHDNAQYGFDPHDDSDNLEIAYNTVWGNGNHGIIASKRCNNVKIHHNTVYDGGEGAVGIFLHRSSDDCEVWGNTVYDMKDAGMAIMESMGAHIHDNTFTNVKYGIRLSVGAARNIVENNSFLECDQYGIYTYQGNDKPEASKDWDGLLVDNTFHANTV---EGGVKIQKAEGIVFTDNNFYEHSSGEEYRFEDCEDVVWTNNRVPD---DICLKGDKNIDYMKSYDSLPDLC 845
BLAST of mRNA_F-serratus_M_contig862.20006.1 vs. uniprot
Match: D7G8D9_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8D9_ECTSI) HSP 1 Score: 416 bits (1068), Expect = 2.660e-129 Identity = 224/431 (51.97%), Postives = 281/431 (65.20%), Query Frame = 1
Query: 82 YLEDGGCGTMTDLYQSRVEKDGWTPKGPIYILDDNDDIMYSPTSVTGKWLLTSQLFVLRGSVFYCRGTSIGGDCDELRIQSTGSTDFHEVRGHGGSLYFEKTLVTSWDTPNKSPQEDYEGGRSFINCVSEYESDET--CEGQPKNDYGECRMDIIDSEMGYLGWFDSESYGLTWKVRGFCADKS------NPEVFDTTNVYGDIKNSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGGSQAAGIFLHRSSDSCEVYDNNVHDMQDAGMAILESFDADIHDNSFTNVKYGIRISLGGGNNNVYDNVFDQCSTYGLYTYQGSDAPEA-SSDGRPSDNSFYDNTISNT--ETGVKIKEGDNTIITGNTFTGTSLLEFNDAEDTVWTSNT 1341
Y E GGCGT+T +Y+++ E DG P+Y+LD+N+D++ + TG WLL L V+ GS GT+ GD D LR+ ST S DF EVRG+GG+L+F+ T VTSWDT N +E GRSFINCV++++ C+G+ ++GECRMDII S MG +GWFD+ESYGLTWKVRG C N E+F+ NVYGDI NS+I+ MYYG YSYGHQGGVW +N M DN QYGFDPHDDSD LTI+ +GG A GIFLHRSSD EV+DN V++MQDAGMA++ES+DA+I+DNSFTN +YGIR+SLG G N + +N+F + YGLYTY GSD P+ +S+GRPSDN F NTI GV IKEGD+ + N FTG S EF D+ DT W NT
Sbjct: 192 YFEGGGCGTLTQMYEAQ-EGDG-----PLYVLDENNDVVGG--TPTGYWLLDRNLRVVDGSTLLVHGTAASGDADVLRLLST-SDDFIEVRGYGGNLHFQSTTVTSWDTDNGQEREWDGDGRSFINCVTQFDDSAIWDCDGRSNQEWGECRMDIISSTMGNMGWFDAESYGLTWKVRGACEIDPDTGVPYNHEIFEDHNVYGDILNSEIYGMYYGHYSYGHQGGVWDSNIMRDNIQYGFDPHDDSDDLTISNNIVYGNGNHGIIASKRCNNVKIFNNEVYDGGEDAVGIFLHRSSDGAEVHDNVVYNMQDAGMAMMESYDANIYDNSFTNCRYGIRLSLGSGRNIITNNLFSGITQYGLYTYMGSDDPDVPNSNGRPSDNVFDGNTIETDGDNIGVHIKEGDSNVFIDNVFTGVSTYEFEDSSDTTWVDNT 613
BLAST of mRNA_F-serratus_M_contig862.20006.1 vs. uniprot
Match: D7FWE8_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWE8_ECTSI) HSP 1 Score: 392 bits (1008), Expect = 4.850e-118 Identity = 221/467 (47.32%), Postives = 277/467 (59.31%), Query Frame = 1
Query: 28 GTKASIRWASGTGINGRMYLEDGGCGTMTDLYQSRVEKDGWTPKGPIYILDDNDDIMYS---PTSVTGKWLLTSQLFVLRGSVFYCRGTSIGGDCDELRIQSTGSTDFHEVRGHGGSLYFEKTLVTSWDTPNKSPQEDYEGGRSFINCVSEYESDE--TCEGQPKNDYGECRMDIIDSEMGYLGWFDSESYGLTWKVRGFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGGSQAAGIFLHRSSDSCEVYDNNVHDMQDAGM------------------------AILESFDADIHDNSFTNVKYGIRISLGGGNNNVYDNVFDQCSTYGLYTYQGSDAPEAS-SDGRPSDNSFYDNTISNTETGVKIKEGDNTIITGNTFTGTSLLEFNDAEDTVWTSN 1338
GT ASI +S + GGC T+TD+Y ++ + GP+Y+LD +++I+ S TG WLLTS L +L G Y GTS GGD D LRIQST DF E+RG GGSL F +T VTSWDT + +YEGGRSFINCV++++ + +C G+ + GECRMDIIDS MG +GWFD+ESYGLTWKVRG C+D SN E+ D NVYGDIK S+I+ MYYGMYSYGHQGGVWT+N M DN YGFDPHDDSD LTIA G+ GI + ++ E+Y A++ESF A+I+DN+ N KYGIR+SLG +N+++DN FD STYGLYTY+GSD P+ S +DGR DNSF NTISNT+ +KIKEGD+ T N F EF D+ DTVWT+N
Sbjct: 396 GTIASISTSSDSSS-----FSGGGCATLTDMYNTQ------SGSGPLYVLDSSNNIVSGGGGSASPTGYWLLTSSLEILDGVTLYVHGTSAGGDADVLRIQST-DDDFWEIRGWGGSLSFLETTVTSWDTDKGEERTEYEGGRSFINCVTQFDDSDIWSCSGRSNKERGECRMDIIDSTMGNMGWFDAESYGLTWKVRGLCSDLSNVEIMDDHNVYGDIKGSEIYGMYYGMYSYGHQGGVWTDNVMRDNILYGFDPHDDSDDLTIAGNTVY--------------------------GNGNHGIIASKRCNNVEIYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALMESFRAEIYDNTIENCKYGIRLSLGSADNDIHDNTFDSSSTYGLYTYKGSDDPDVSGNDGRVKDNSFDANTISNTDVAMKIKEGDDNSFTNNVFENVKTFEFEDSTDTVWTNN 824
BLAST of mRNA_F-serratus_M_contig862.20006.1 vs. uniprot
Match: D7G339_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G339_ECTSI) HSP 1 Score: 377 bits (969), Expect = 1.880e-116 Identity = 219/476 (46.01%), Postives = 278/476 (58.40%), Query Frame = 1
Query: 40 SIRWASGTGINGRMYLED-------GGCGTMTDLYQSRVEKDGWTPKGPIYILD-DNDDIMYSPTSVTGKWLLTSQLFVLRGSVFYCRGTSIGGDCDELRIQSTGSTDFHEVRGHGGSLYFEKTLVTSWDTPNKSPQEDYEGGRSFINCVSEY--ESDETCEGQPKNDYGECRMDIIDSEMGYLGWFDSESYGLTWKVRGFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGGSQAAGIFLHRSSDSCEVYDNNVHDMQDAGMAILESFDADIHDNSFTNVKYGIRISLGGGNNNVYDNVFDQCSTYGLYTYQGSDAPEASSDGRPSDNSFYDNTISNTETGVKIKEGDNTIITGNTF-TGTS---LLEFNDAEDTVWTSNTFED-------ADSDLCYKNIASSTFESI 1404
SIR+A G R+YLE GGC T+ +++SR K GP+Y +D D+ ++ TS TG WLLT +L+V G G+ GGD DELR+ ST T F +R HGGSL F T V SWDT SP ED GRS+I+ +SE + DETCEG KN GE RMDI SE+GYLG++DSESYGLTWKVRGFC DKSNPEVFD NVYG++ +SDIHHM +G+Y+YGHQ G W NKMHDN YGFDPHDDSD+LTI G +AGIFLHRSSD V N VHD DAG+A+LESF+AD+ +N+F N KYG+R S+G +N +N + Y Y+Y G+D P+ S GR +N F N+ S E +KIKE D T N F G + ++ F++A + + NT D D+D C+ A S +E +
Sbjct: 45 SIRYA---GTTARLYLESADNGTTRGGCVTLGQIWESRAGK------GPLYAVDPDSGNVS---TSATGTWLLTEELYVEDGITLKVYGSEAGGDADELRLLSTNET-FINLRAHGGSLDFVSTKVFSWDTSTNSPDEDETDGRSYISAISEIITDEDETCEGNAKNTMGEARMDIESSEIGYLGYWDSESYGLTWKVRGFCEDKSNPEVFDDVNVYGNVYDSDIHHMNFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRFSVGCADNVFSNNTISNNAEYNAYSYLGTDEPDVVSSGRSQNNVFSQNSFSGAEETIKIKEADGTQFLDNVFEVGDADGLVVRFDNATENLMQGNTGLDDGEFELKVDNDACFDGEADSGYEPV 507 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig862.20006.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig862.20006.1 >prot_F-serratus_M_contig862.20006.1 ID=prot_F-serratus_M_contig862.20006.1|Name=mRNA_F-serratus_M_contig862.20006.1|organism=Fucus serratus male|type=polypeptide|length=476bp MTIPDECTGTKASIRWASGTGINGRMYLEDGGCGTMTDLYQSRVEKDGWTback to top mRNA from alignment at F-serratus_M_contig862:69604..74011+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig862.20006.1 ID=mRNA_F-serratus_M_contig862.20006.1|Name=mRNA_F-serratus_M_contig862.20006.1|organism=Fucus serratus male|type=mRNA|length=4408bp|location=Sequence derived from alignment at F-serratus_M_contig862:69604..74011+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig862:69604..74011+ >mRNA_F-serratus_M_contig862.20006.1 ID=mRNA_F-serratus_M_contig862.20006.1|Name=mRNA_F-serratus_M_contig862.20006.1|organism=Fucus serratus male|type=CDS|length=2856bp|location=Sequence derived from alignment at F-serratus_M_contig862:69604..74011+ (Fucus serratus male)back to top |