mRNA_F-serratus_M_contig862.20005.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig862.20005.1 vs. uniprot
Match: D8LRM4_ECTSI (Mannuronan C-5-epimerase N-terminal n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRM4_ECTSI) HSP 1 Score: 539 bits (1389), Expect = 5.980e-179 Identity = 277/455 (60.88%), Postives = 332/455 (72.97%), Query Frame = 1
Query: 310 EDGGCGTMTDLYQSRVEKDGWTPKGPIYILDDNDDIMYSPTSVTGKWLLTSQLFVLRGSVFYCRGTSIGGDCDELRIQSTGSTDFHEVRGHGGSLYFENTLVTSWDTPNKSPQEDYEDGRSFINCVSEYESDETCEGQPKNDYGECRMDIIDSEMGYLGWFDSESYGLTWKVRGFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGSQAAGIFLHRSSDSCEVYDNNVHDMQDAGIAILESFDADIHDNTFTNVKYGIRVSLGGGNNNVYDNVFDQCSTYGLYTYQGSDEP-EASSDGRPSDNSFYDNTISNTETGVKIKEGDNTIITGNTFTGTSLLEFNDAEDTVWASNTFEDADSDLCYKNIAS--------STFESTDSTFPSL 1647
E GC T+TDLY R+E DG + KGPI+ LDD+ + + +P ++ KWLLT++L + G+VFYCRG+SIGGDCDELRIQSTG TDFHEVR HGGS+YFE+T+VTSWDTPNK+PQ Y GRSF+NCVSE + E C GQ +N+ GECRMDII+SE+GYLG+FDSESYGLTWKVRGFC D SNP+VFDTTNVYG++ SDIHH YYG YSYGHQGGVW NN+MHDNHQYGFDPHDDSDYLT GG AAGIFLHRSSD V+DN VHDMQDAG+A+LES +ADI++N F++VK+GIR+SLG N+V++N+F+ ST GLYTYQGSDEP + SDGRPSDN F +N I N GVKIKEGD+T+IT N FTGTS LEF DA++T W NT +C KNI S STF+ + P+L
Sbjct: 83 EGEGCFTITDLYNFRLESDG-SAKGPIFNLDDSYNTVLNPKVLSNKWLLTAELHITGGAVFYCRGSSIGGDCDELRIQSTGPTDFHEVRAHGGSMYFESTIVTSWDTPNKTPQATYVGGRSFLNCVSEKLTGEVCVGQAQNEMGECRMDIINSEIGYLGYFDSESYGLTWKVRGFCKDLSNPDVFDTTNVYGNLIGSDIHHNYYGQYSYGHQGGVWHNNQMHDNHQYGFDPHDDSDYLTSIIASKRCNNVQIYNNEVYD------------GGPFAAGIFLHRSSDYAIVHDNVVHDMQDAGMAMLESMNADIYNNRFSSVKFGIRLSLGSSENHVHENLFEDVSTQGLYTYQGSDEPTDGVSDGRPSDNLFENNRILNVTKGVKIKEGDDTVITDNVFTGTSELEFFDAQNTRWKGNTLPQG---VCIKNIHSDDGIDIELSTFDRRTAGLPTL 521
BLAST of mRNA_F-serratus_M_contig862.20005.1 vs. uniprot
Match: D8LC73_ECTSI (Mannuronan C-5-epimerase 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC73_ECTSI) HSP 1 Score: 535 bits (1378), Expect = 2.580e-172 Identity = 264/451 (58.54%), Postives = 317/451 (70.29%), Query Frame = 1
Query: 226 MTIADECTGTKS--SIRWASGTGVNGRMYLEDGGCGTMTDLYQSRVEKDGWTPKGPIYILDDNDDIMYSPTSVTGKWLLTSQLFVLRGSVFYCRGTSIGGDCDELRIQSTGSTDFHEVRGHGGSLYFENTLVTSWDTPNKSPQEDYEDGRSFINCVSEYESDETCEGQPKNDYGECRMDIIDSEMGYLGWFDSESYGLTWKVRGFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGSQAAGIFLHRSSDSCEVYDNNVHDMQDAGIAILESFDADIHDNTFTNVKYGIRVSLGGGNNNVYDNVFDQCSTYGLYTYQGSDEPEASSDGRPSDNSFYDNTISNTETGVKIKEGDNTIITGNTFTGTSLLEFNDAEDTVWASNTFED 1572
M I+ C + S R+A+ +GV GR+Y E GC TMTDLY R ++ + KGP+Y+LDD+ + P+ +T WLL ++L++ G VFYC+GTS GGDC++LRIQSTGS DFHEVRGHGGSLYFE+T+VTSWDTPNK PQE YE+GRSF+NCVSE + + CEG KN+ GECRMDII+SE+ YLG+FDSESYG+TWKVRGFC D SNPEVF+ TNVYGD+ SDIHH+YYG YSYGHQGGVWTNNKMHDN QYGFDPHDDSDYLTIA GG+ AAGIFLHRSSD V+DN + +MQDAGIA+LESFDA I+ N KYGIR+SLG GNN VY N F S YGLYTY+GSDEP+ S DGRPS N N + + GVKIKEGD+ NTF EF ++ +T+W+ N D
Sbjct: 415 MEISSSCGDDEDRPSFRYAASSGVAGRLYAEGEGCFTMTDLYNFRGTENDGSSKGPVYMLDDDGTKLDIPSGITNNWLLAAELYITGGGVFYCKGTSAGGDCNQLRIQSTGSDDFHEVRGHGGSLYFEDTIVTSWDTPNKEPQETYENGRSFLNCVSEKLTGDDCEGNAKNEMGECRMDIINSEIAYLGYFDSESYGMTWKVRGFCKDLSNPEVFELTNVYGDLTGSDIHHLYYGHYSYGHQGGVWTNNKMHDNWQYGFDPHDDSDYLTIAYNEVYNNVNHGIIASKRCNNVKIFENEVRDGGAAAAGIFLHRSSDGAAVFDNTITNMQDAGIAMLESFDAQIYGNIINGAKYGIRMSLGSGNNEVYQNSFTDISQYGLYTYEGSDEPDVS-DGRPSGNVLALNLVEDCPIGVKIKEGDDNEFYQNTFINVDAFEFPESTNTMWSGNDIGD 864
BLAST of mRNA_F-serratus_M_contig862.20005.1 vs. uniprot
Match: A0A6H5JGU8_9PHAE (MEP1 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGU8_9PHAE) HSP 1 Score: 505 bits (1301), Expect = 1.160e-166 Identity = 258/455 (56.70%), Postives = 313/455 (68.79%), Query Frame = 1
Query: 310 EDGGCGTMTDLYQSRVEKDGWTPKGPIYILDDNDDIMYSPTSVTGKWLLTSQLFVLRGSVFYCRGTSIGGDCDELRIQSTGSTDFHEVRGHGGSLYFENTLVTSWDTPNKSPQEDYEDGRSFINCVSEYESDETCEGQPKNDYGECRMDIIDSEMGYLGWFDSESYGLTWKVR---------GFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGSQAAGIFLHRSSDSCEVYDNNVHDMQDAGIAILESFDADIHDNTFTNVKYGIRVSLGGGNNNVYDNVFDQCSTYGLYTYQGSDEPEASSDGRPSDNSFYDNTISNTETGVKIKEGDNTIITGNTFTGTSLLEFNDAEDTVWASNTFEDADSDLCYKNIASSTFESTD-STFPS 1644
E GC T+TDLY R ++ + KGP+Y+LD + + +PTSVT KWLL ++L+V G++FYC G+ GGDCDELRIQSTG D++EVRGHGGS+YF +T+VTSWDTPNK PQE YE GRSF+NCVSE + ETC+G KND GECRMDII+SEMGY+G+FDSESYGLTWKVR GFC D SNP+VF+TTNVYGDIKNSDIHHMYYG YSYGHQGGVWTNN+MHDNHQY +A GG A GIFLHRSSD+ EVY N + +M DAGIA+LESF+ADIHDN V++GIR+SLG G N+VYDN F+ CS +GLYTY GSDEP+ S+ GRP+ N+F +N ++N+ GVK K DN ++T N FTGT LEF DA+ T W+ N+ S +C NI S S STF S
Sbjct: 18 ESEGCFTLTDLYNFRGTENDGSSKGPLYMLDGSGSKITAPTSVTKKWLLEAELYVTNGAIFYCIGSEEGGDCDELRIQSTGPDDWYEVRGHGGSMYFSHTVVTSWDTPNKQPQETYEGGRSFLNCVSEKLTGETCDGMAKNDMGECRMDIINSEMGYMGFFDSESYGLTWKVRRQAGRGVVRGFCKDLSNPDVFETTNVYGDIKNSDIHHMYYGHYSYGHQGGVWTNNEMHDNHQY------------VANNKVYNNYNHGIIASKRCNNVKIYDNQVSDGGPDAVGIFLHRSSDNAEVYGNKIWNMPDAGIALLESFNADIHDNEIDGVQFGIRMSLGSGGNSVYDNEFNDCSDWGLYTYMGSDEPDVSN-GRPNGNTFNNNKVTNSAGGVKFKNSDNIVVTNNEFTGTEELEFYDAQATTWSGNSLP---SGVCIDNITSDDGNSVPPSTFSS 456
BLAST of mRNA_F-serratus_M_contig862.20005.1 vs. uniprot
Match: D7FRR8_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRR8_ECTSI) HSP 1 Score: 488 bits (1257), Expect = 2.310e-160 Identity = 247/448 (55.13%), Postives = 305/448 (68.08%), Query Frame = 1
Query: 310 EDGGCGTMTDLYQSRVEKDGWTPKGPIYILDDNDDIMYSPTSVTGKWLLTSQLFVLRGSVFYCRGTSIGGDCDELRIQSTGSTDFHEVRGHGGSLYFENTLVTSWDTPNKSPQEDYEDGRSFINCVSEY-ESDETCEGQPKNDYGECRMDIIDSEMGYLGWFDSESYGLTWKVRGFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGSQAAGIFLHRSSDSCEVYDNNVHDMQDAGIAILESFDADIHDNTFTNVKYGIRVSLGGGNNNVYDNVFDQCSTYGLYTYQGSDEPEASSDGRPSDNSFYDNTISNTETGVKIKEGDNTIITGNTFTGTSLLEFNDAEDTVWASNTFEDADSDLCYKNIASSTFESTDSTFPSLC 1650
+ GGC T++DLY + + KGP+++LD ND + + T+ TGKWLLT+ LFV G+ YCRG +GG+C ELRI+ST +DF E+RGHGG+LYFE+T+VTSWD + PQE Y+DGRSFI CVSE ++TC N+ GECRMDIIDSEMGYLG+ SE+YG+TWKVRGFC+D SNP+VFD NVYGD+K SDIHHMYYGMYS+GHQGGVWTNN MHDNHQYGFDPHDDSDYL IA GG+ AAGIFLHRS D EVY N + +M DAGIA+LE+ DIHDN ++GIRV LG NN V+DNVF G++TY GSDEP GRP DN FY+NTI TETGVKIKE DN IT N F+GT+ +EFN+A D VW+ N+ ++ C ++I +++ + S P C
Sbjct: 7 DGGGCFTLSDLYAWQGFYNNGNSKGPVFVLDSNDRVDETATTTTGKWLLTADLFVTGGATLYCRGKGVGGNCAELRIRSTSGSDFFEIRGHGGNLYFEDTIVTSWDVDGRKPQETYKDGRSFIRCVSEVLTGEDTC---AINNMGECRMDIIDSEMGYLGYDASEAYGITWKVRGFCSDLSNPDVFDDVNVYGDMKGSDIHHMYYGMYSFGHQGGVWTNNLMHDNHQYGFDPHDDSDYLIIAGNKVYNNVNHGIIASKRCNNVKIYDNEVYDGGADAAGIFLHRSGDDSEVYGNTITNMGDAGIAMLETSGCDIHDNQVDGGEFGIRVHLGSSNNKVHDNVFKNIWNVGMFTYVGSDEPWVGG-GRPCDNEFYNNTIQATETGVKIKESDNISITNNAFSGTTEIEFNNAIDIVWSGNSIP---TNTCLEDIDNNSTFTGSSGLPLEC 447
BLAST of mRNA_F-serratus_M_contig862.20005.1 vs. uniprot
Match: A0A6H5KWQ2_9PHAE (MEP2 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWQ2_9PHAE) HSP 1 Score: 436 bits (1120), Expect = 2.440e-141 Identity = 215/347 (61.96%), Postives = 249/347 (71.76%), Query Frame = 1
Query: 331 MTDLYQSR-VEKDGWTPKGPIYILDDNDDIMYSPTSVTGKWLLTSQLFVLRGSVFYCRGTSIGGDCDELRIQSTGSTDFHEVRGHGGSLYFENTLVTSWDTPNKSPQEDYEDGRSFINCVSEYESDETCEGQPKNDYGECRMDIIDSEMGYLGWFDSESYGLTWK--------VRGFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGSQAAGIFLHRSSDSCEVYDNNVHDMQDAGIAILESFDADIHDNTFTNVKYGIRVSLGGGNNNVYDNVFDQCS 1344
MTDLY R EKDG + KGP+Y+LDD+ + P+ +T WLL ++L++ G VFYC+GTS GGDC++LRIQSTGS DFHEVRGHGGSLYFE+T+VTSWDTPNK PQE YE GRSF+NCVSE + + CEG KN+ GECRMDII+SE+ YLG+FDSESYG+TWK VRGFC D SNPEVFD TNVYGD+ SDIHH+YYG YSYGHQGGVWTNNKMHDN QYGFDPHDDSDYLT GG+ A GIFLHRSSD V+DN + +MQDAGIA+LE+FDA I+ NT KYGIR+SLG GNN VY N F S
Sbjct: 1 MTDLYNFRGTEKDG-SSKGPVYMLDDDGTKLDIPSGITNNWLLAAELYITGGGVFYCKGTSAGGDCNQLRIQSTGSDDFHEVRGHGGSLYFEDTIVTSWDTPNKEPQETYEGGRSFLNCVSEKLTGDDCEGNAKNEMGECRMDIINSEIAYLGYFDSESYGMTWKARLTRGFPVRGFCKDLSNPEVFDLTNVYGDLIGSDIHHLYYGHYSYGHQGGVWTNNKMHDNWQYGFDPHDDSDYLTRIIASKRCNNVKIFENEVRD------------GGAAAVGIFLHRSSDDAAVFDNTITNMQDAGIALLEAFDAQIYGNTINGAKYGIRMSLGSGNNVVYQNSFTDIS 334
BLAST of mRNA_F-serratus_M_contig862.20005.1 vs. uniprot
Match: D7FIU4_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIU4_ECTSI) HSP 1 Score: 416 bits (1070), Expect = 9.700e-134 Identity = 235/418 (56.22%), Postives = 276/418 (66.03%), Query Frame = 1
Query: 394 ILDDNDDIMYSPTSVTGKWLLTSQLFVLRGSVFYCRGTSIGGDCDELRIQSTGSTDFHEVRGHGGSLYFENTLVTSWDTPNKSPQEDYEDGRSFINCVSEYESDETCEGQPKNDYGECRMDIIDSEMGYLGWFDSESYGLTWKVRGFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGSQAAGIFLHRSSDSCEVYDNNVHDMQDAGIAILESFDADIHDNTFTNVKYGIRVSLGGGNNNVYDNVFDQCSTYGLYTYQGSDEPEASSDGRPSDNSFYDNTISNTETGVKIKEGDNTIITGNTFTGTSLLEFNDAEDTVWASNTFEDADSDLCYKNIASSTFESTD-STFPS 1644
+LDD+ + + SPTSVT KWLL S+L+V G++FYC G+ GGDCDELRIQSTG D++EVRGHGGS+YF +T+VTSWDTPNK PQE YE GRSF+NCVSE + ETC+G+ KND GECRMDII+SEMGY+G+FD+ESYGLTWKVRGFC D SNP+VF+TTNVYGDIKNS+IHHMYYGMYSYGHQGGVWTNN+MHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXX GG +A GIFLHRSSD+ EVY G D P+ S+ GRP+ N+F +N I+NT GVKIK DN +I+ N FTGT LEF DA+ T W+ N+ S +C N+ S S STF S
Sbjct: 1 MLDDSGNKITSPTSVTKKWLLESELYVTDGAIFYCIGSEEGGDCDELRIQSTGPDDWYEVRGHGGSMYFSHTVVTSWDTPNKKPQETYEGGRSFLNCVSEKLTGETCDGKAKNDEGECRMDIINSEMGYMGFFDAESYGLTWKVRGFCKDLSNPDVFETTNVYGDIKNSNIHHMYYGMYSYGHQGGVWTNNEMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXASKRCNNVQIYNNEVSDGGPEAVGIFLHRSSDNAEVYG-------------------------------------------------------GXXXXXXXDAPDVSN-GRPNGNTFNNNKITNTAGGVKIKNSDNIVISNNDFTGTEELEFFDAQATTWSDNSLP---SGVCIDNVTSDDGNSVPPSTFSS 359
BLAST of mRNA_F-serratus_M_contig862.20005.1 vs. uniprot
Match: D7G8D9_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8D9_ECTSI) HSP 1 Score: 417 bits (1072), Expect = 2.500e-130 Identity = 223/431 (51.74%), Postives = 283/431 (65.66%), Query Frame = 1
Query: 304 YLEDGGCGTMTDLYQSRVEKDGWTPKGPIYILDDNDDIMYSPTSVTGKWLLTSQLFVLRGSVFYCRGTSIGGDCDELRIQSTGSTDFHEVRGHGGSLYFENTLVTSWDTPNKSPQEDYEDGRSFINCVSEYESDET--CEGQPKNDYGECRMDIIDSEMGYLGWFDSESYGLTWKVRGFCADKS------NPEVFDTTNVYGDIKNSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGSQAAGIFLHRSSDSCEVYDNNVHDMQDAGIAILESFDADIHDNTFTNVKYGIRVSLGGGNNNVYDNVFDQCSTYGLYTYQGSDEPEA-SSDGRPSDNSFYDNTISNT--ETGVKIKEGDNTIITGNTFTGTSLLEFNDAEDTVWASNT 1563
Y E GGCGT+T +Y+++ E DG P+Y+LD+N+D++ + TG WLL L V+ GS GT+ GD D LR+ ST S DF EVRG+GG+L+F++T VTSWDT N +E DGRSFINCV++++ C+G+ ++GECRMDII S MG +GWFD+ESYGLTWKVRG C N E+F+ NVYGDI NS+I+ MYYG YSYGHQGGVW +N M DN QYGFDPHDDSD LTI+ GG A GIFLHRSSD EV+DN V++MQDAG+A++ES+DA+I+DN+FTN +YGIR+SLG G N + +N+F + YGLYTY GSD+P+ +S+GRPSDN F NTI GV IKEGD+ + N FTG S EF D+ DT W NT
Sbjct: 192 YFEGGGCGTLTQMYEAQ-EGDG-----PLYVLDENNDVVGG--TPTGYWLLDRNLRVVDGSTLLVHGTAASGDADVLRLLST-SDDFIEVRGYGGNLHFQSTTVTSWDTDNGQEREWDGDGRSFINCVTQFDDSAIWDCDGRSNQEWGECRMDIISSTMGNMGWFDAESYGLTWKVRGACEIDPDTGVPYNHEIFEDHNVYGDILNSEIYGMYYGHYSYGHQGGVWDSNIMRDNIQYGFDPHDDSDDLTISNNIVYGNGNHGIIASKRCNNVKIFNNEVYDGGEDAVGIFLHRSSDGAEVHDNVVYNMQDAGMAMMESYDANIYDNSFTNCRYGIRLSLGSGRNIITNNLFSGITQYGLYTYMGSDDPDVPNSNGRPSDNVFDGNTIETDGDNIGVHIKEGDSNVFIDNVFTGVSTYEFEDSSDTTWVDNT 613
BLAST of mRNA_F-serratus_M_contig862.20005.1 vs. uniprot
Match: A0A6H5JNF5_9PHAE (MEP13 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNF5_9PHAE) HSP 1 Score: 424 bits (1089), Expect = 3.100e-130 Identity = 228/459 (49.67%), Postives = 289/459 (62.96%), Query Frame = 1
Query: 295 GRMYLEDGGCGTMTDLYQSRVEKDGWTPKGPIYILDDNDDIMYSPTSVTGKWLLTSQLFVLRGSVFYCRGTSIGGDCDELRIQSTGSTDFHEVRGHGGSLYFENTLVTSWDTPNKSPQEDYEDGRSFINCVSEYESD--ETCEGQPKNDYGECRMDIIDSEMGYLGWFDSESYGLTWKVRGFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGSQAAGIFLHRSSDSCEVYDNNVHDMQDAGIAILESFDADIHDNTFTNVKYGIRVSLGGGNNNVYDNVFDQCSTYGLYTYQGSDEPEASSD--GRPSDNSFYDNTISNTETGVKIKEGDNTIITGNTFTGTSLLE---FNDAEDTVWASNTFEDADSDLCYKNIASSTFESTDSTFPSLC 1650
G+ Y+ GGC T+TD+Y ++ G GP+++LD ND+++ S TG WLL + V GS+ G GGD LRIQSTGS D++E+RGHGGSL F +T VTSWDT K +Y+ RSFI CVSE +D +TC+G N GECRMDII SEMG +G+ +ESYG++WKVRG+C++ NPEVF+ T V GDI +SDI+ MYYG YS+GH GG+WT NKMHDN QYGFDPHDDSD L IA GG A GIFLHRSSD CEV+ N V+DM+DAG+AI+ES A IHDNTFTNVKYGIR+S+G N V +N F +C YG+YTYQG+D+PEAS D G DN+F+ NT+ E GVKI++ + + T N F S E F D ED VW +N D D+C K + + + + P LC
Sbjct: 398 GKNYIRGGGCATLTDIYTAQG---GHNDDGPLFVLDSNDNVVGG--SPTGYWLLMRDIHVEEGSLLQVHGPDAGGDARVLRIQSTGSRDYYEIRGHGGSLSFMDTKVTSWDTDEKKVNTNYKKERSFIRCVSEELADKPDTCDGHAVNHMGECRMDIIRSEMGEMGYDAAESYGISWKVRGYCSEDPNPEVFERTRVRGDIIDSDIYGMYYGHYSFGHDGGIWTGNKMHDNAQYGFDPHDDSDNLEIAYNTVWGNGNHGIIASKRCNNVKIHHNTVYDGGEGAVGIFLHRSSDDCEVWGNTVYDMKDAGMAIMESMGAHIHDNTFTNVKYGIRLSVGAARNIVENNSFLECDQYGIYTYQGNDKPEASKDWDGLLVDNTFHANTV---EGGVKIQKAEGIVFTDNNFYEHSSGEEYRFEDCEDVVWTNNRVPD---DICLKGDKNIDYMKSYDSLPDLC 845
BLAST of mRNA_F-serratus_M_contig862.20005.1 vs. uniprot
Match: D7G339_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G339_ECTSI) HSP 1 Score: 384 bits (985), Expect = 3.400e-119 Identity = 222/474 (46.84%), Postives = 280/474 (59.07%), Query Frame = 1
Query: 262 SIRWASGTGVNGRMYLED-------GGCGTMTDLYQSRVEKDGWTPKGPIYILD-DNDDIMYSPTSVTGKWLLTSQLFVLRGSVFYCRGTSIGGDCDELRIQSTGSTDFHEVRGHGGSLYFENTLVTSWDTPNKSPQEDYEDGRSFINCVSEY--ESDETCEGQPKNDYGECRMDIIDSEMGYLGWFDSESYGLTWKVRGFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGSQAAGIFLHRSSDSCEVYDNNVHDMQDAGIAILESFDADIHDNTFTNVKYGIRVSLGGGNNNVYDNVFDQCSTYGLYTYQGSDEPEASSDGRPSDNSFYDNTISNTETGVKIKEGDNTIITGNTF-TGTS---LLEFNDAEDTVWASNTFED-------ADSDLCYKNIASSTFE 1620
SIR+A G R+YLE GGC T+ +++SR K GP+Y +D D+ ++ TS TG WLLT +L+V G G+ GGD DELR+ ST T F +R HGGSL F +T V SWDT SP ED DGRS+I+ +SE + DETCEG KN GE RMDI SE+GYLG++DSESYGLTWKVRGFC DKSNPEVFD NVYG++ +SDIHHM +G+Y+YGHQ G W NKMHDN YGFDPHDDSD+LTI G +AGIFLHRSSD V N VHD DAG+A+LESF+AD+ +NTF N KYG+R S+G +N +N + Y Y+Y G+DEP+ S GR +N F N+ S E +KIKE D T N F G + ++ F++A + + NT D D+D C+ A S +E
Sbjct: 45 SIRYA---GTTARLYLESADNGTTRGGCVTLGQIWESRAGK------GPLYAVDPDSGNVS---TSATGTWLLTEELYVEDGITLKVYGSEAGGDADELRLLSTNET-FINLRAHGGSLDFVSTKVFSWDTSTNSPDEDETDGRSYISAISEIITDEDETCEGNAKNTMGEARMDIESSEIGYLGYWDSESYGLTWKVRGFCEDKSNPEVFDDVNVYGNVYDSDIHHMNFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRFSVGCADNVFSNNTISNNAEYNAYSYLGTDEPDVVSSGRSQNNVFSQNSFSGAEETIKIKEADGTQFLDNVFEVGDADGLVVRFDNATENLMQGNTGLDDGEFELKVDNDACFDGEADSGYE 505
BLAST of mRNA_F-serratus_M_contig862.20005.1 vs. uniprot
Match: D7FXE4_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXE4_ECTSI) HSP 1 Score: 383 bits (984), Expect = 5.400e-119 Identity = 238/520 (45.77%), Postives = 303/520 (58.27%), Query Frame = 1
Query: 154 SAVASMLLAALG--SSWDNVFAAD-----DSMTIADECTGTKSSIRWASGTGVNGRMYLED------GGCGTMTDLYQSRVEKDGWTPKGPIYILD-DNDDIMYSPTSVTGKWLLTSQLFVLRGSVFYCRGTSIGGDCDELRIQSTGSTDFHEVRGHGGSLYFENTLVTSWDTPNKSPQEDYEDGRSFINCVSEY--ESDETCEGQPKNDYGECRMDIIDSEMGYLGWFDSESYGLTWKVRGFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGSQAAGIFLHRSSDSCEVYDNNVHDMQDAGIAILESFDADIHDNTFTNVKYGIRVSLGGGNNNVYDNVFDQCSTYGLYTYQGSDEPEASSDGRPSDNSFYDNTISNTETGVKIKEGDNTIITGNTF-TGTS---LLEFNDAEDTVWASNT-FEDADSDLCYKNIASSTFESTDSTFPSLC 1650
SA +S LA LG +S AAD D ++ D + + SIR+A G R+YLE GGC T+ +++SR K P+Y +D D+ D+ + T G WLLT +L+V G GT GGD DELR+ ST T + +R HGGSL F T V SWDT SP ED DGRS+I+ VSE + DETCEG KN GE RMDI +SE+GYLG+ DSESYGLTWKVRGFC DKSNPE+FD NVYG++ +SDIHH+ +G+Y+YGHQ G W NKMHDN YGFDPHDDSD+LTI G +AGIFLHRSSD V N VHD DAG+A+LESF+AD+ +NTF N KYG+R+S+G +N +N+ S Y YTY GSDEP+ S GR +N F N+ S E +KIKE D T N F G + ++ F+DA ++V NT ++ D +L N + ES DS + +C
Sbjct: 7 SATSSFGLALLGLLASTTPAAAADTASPNDPISKPDCDSDIEVSIRYA---GTTKRLYLESADGETRGGCATLGQIWESRAGK------APLYAVDPDSGDVSETET---GTWLLTEELYVEDGITLKVYGTDEGGDADELRLLSTSET-YINLRAHGGSLDFVGTKVFSWDTSTNSPDEDETDGRSYISAVSEIVTDEDETCEGNAKNTMGEARMDIENSEIGYLGFQDSESYGLTWKVRGFCKDKSNPEIFDDVNVYGNMYDSDIHHLRFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRMSVGCADNVFSENIISNNSKYNAYTYLGSDEPDVVSSGRSQNNVFSQNSFSGAEETIKIKEADGTQFLDNVFEVGDADGLVVRFDDAMNSVMQGNTGLDEGDFELKVTNDSCFDGES-DSGYEPVC 512 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig862.20005.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig862.20005.1 >prot_F-serratus_M_contig862.20005.1 ID=prot_F-serratus_M_contig862.20005.1|Name=mRNA_F-serratus_M_contig862.20005.1|organism=Fucus serratus male|type=polypeptide|length=506bp MARVTPSAVASMLLAALGSSWDNVFAADDSMTIADECTGTKSSIRWASGTback to top mRNA from alignment at F-serratus_M_contig862:30476..38032- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig862.20005.1 ID=mRNA_F-serratus_M_contig862.20005.1|Name=mRNA_F-serratus_M_contig862.20005.1|organism=Fucus serratus male|type=mRNA|length=7557bp|location=Sequence derived from alignment at F-serratus_M_contig862:30476..38032- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig862:30476..38032- >mRNA_F-serratus_M_contig862.20005.1 ID=mRNA_F-serratus_M_contig862.20005.1|Name=mRNA_F-serratus_M_contig862.20005.1|organism=Fucus serratus male|type=CDS|length=3036bp|location=Sequence derived from alignment at F-serratus_M_contig862:30476..38032- (Fucus serratus male)back to top |