mRNA_F-serratus_M_contig86.19980.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig86.19980.1
Unique NamemRNA_F-serratus_M_contig86.19980.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig86.19980.1 vs. uniprot
Match: A0A6H5JHQ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHQ8_9PHAE)

HSP 1 Score: 470 bits (1209), Expect = 4.790e-162
Identity = 306/369 (82.93%), Postives = 319/369 (86.45%), Query Frame = 1
Query:    1 MPSTLSKASGSVECSIATTDIDRRCGDANQTPLMVASVIGSSRVVRDLLRQGASVSVADSDGYTALHHAVYHKHLAVSKDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNPLLSAYGSLPLGTAVYNGHLEVVRELVHWYGIDRCTSDGGALALATAASRKHVDIVTFLCDAGVVDTEGVAL------------------QGGNANKGTRAYVNMDHGTLPKTYEEFVFQETPLVSTFNLGSFHAPRFARLLLEAGADATSGVRFPCDSDEGEEDEGFIGTPLDLATSYFRRFSPMKVHREIVRGLKGVIRLLRQEEAVHAVSWLW 1053
            MPSTLSKASGSVE ++ATTDIDRRCGD N TPLMVASVIGSSRVV+DLLRQGASVSVADSDGYTALHH+VYH+HLAVS               XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     NPLLSAYGSLPLGTAVYNGHL+VV ELVHWYG DRCT+DGG LALATAASRKHVDIVTFLCDAGVVDTEGVAL                  QGGN N  TRAYVNM HGTLP+TY++FVFQETPLVSTFNLGSFHAPRFARLLLEAGADATSGVRFPCDSDEGEEDE FIGTPL+LATSYFRRFSPM+VHRE+VRGLKGVIRLLRQEEAVHAVSW W
Sbjct:    1 MPSTLSKASGSVERAVATTDIDRRCGDTNHTPLMVASVIGSSRVVKDLLRQGASVSVADSDGYTALHHSVYHRHLAVSISLIEAGADLEARPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRANANPLLSAYGSLPLGTAVYNGHLKVVSELVHWYGTDRCTNDGGVLALATAASRKHVDIVTFLCDAGVVDTEGVALCAAIEGCSEACVYLLLRRQGGNINVSTRAYVNMAHGTLPETYDDFVFQETPLVSTFNLGSFHAPRFARLLLEAGADATSGVRFPCDSDEGEEDEDFIGTPLELATSYFRRFSPMRVHREMVRGLKGVIRLLRQEEAVHAVSWTW 369          
BLAST of mRNA_F-serratus_M_contig86.19980.1 vs. uniprot
Match: A0A6H5JL58_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL58_9PHAE)

HSP 1 Score: 478 bits (1231), Expect = 4.270e-160
Identity = 328/369 (88.89%), Postives = 336/369 (91.06%), Query Frame = 1
Query:    1 MPSTLSKASGSVECSIATTDIDRRCGDANQTPLMVASVIGSSRVVRDLLRQGASVSVADSDGYTALHHAVYHKHLAVSKDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNPLLSAYGSLPLGTAVYNGHLEVVRELVHWYGIDRCTSDGGALALATAASRKHVDIVTFLCDAGVVDTEGVAL------------------QGGNANKGTRAYVNMDHGTLPKTYEEFVFQETPLVSTFNLGSFHAPRFARLLLEAGADATSGVRFPCDSDEGEEDEGFIGTPLDLATSYFRRFSPMKVHREIVRGLKGVIRLLRQEEAVHAVSWLW 1053
            MPSTLSKASGS + +IATTDIDRRCG  NQTPLMVASVIGSSRVVRDLLRQGASVSVADSDGYTALHHAVYHKHLAVSK XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   NPLLSAYGSLPLG AVY+GHLEVVRELVHWYG DRCTSDGGALALATAASRKHVDIV FLC+AGVVDTEGVAL                  QGGNAN GTRAYVNMDHGTLP+TYEEFVFQETPLVSTFNLGSFHAPRFARLLLEAGADATSGVRFPCDSDEGEEDEGFIGTPLDLATSY RRFS MKVHRE+VRGLKGVIRLL+QEEAVH+VSW W
Sbjct:  422 MPSTLSKASGSADPTIATTDIDRRCGGTNQTPLMVASVIGSSRVVRDLLRQGASVSVADSDGYTALHHAVYHKHLAVSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXANANPLLSAYGSLPLGMAVYHGHLEVVRELVHWYGTDRCTSDGGALALATAASRKHVDIVAFLCNAGVVDTEGVALCAAIEGCSEACVYLLLRRQGGNANTGTRAYVNMDHGTLPETYEEFVFQETPLVSTFNLGSFHAPRFARLLLEAGADATSGVRFPCDSDEGEEDEGFIGTPLDLATSYVRRFSTMKVHREMVRGLKGVIRLLQQEEAVHSVSWTW 790          
BLAST of mRNA_F-serratus_M_contig86.19980.1 vs. uniprot
Match: A0A6H5L5L0_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5L0_9PHAE)

HSP 1 Score: 413 bits (1062), Expect = 2.050e-139
Identity = 315/417 (75.54%), Postives = 322/417 (77.22%), Query Frame = 1
Query:    1 MPSTLSKASGSVECSIATTDIDRRCGDANQTPLMVASVIGSSRVVRDLLRQGASVSVADSDGYTALHHAVYHKHLAVSKDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNPLLSAYGSLPLGTAVYNGHLEVV-RELVHWYGIDRCTSDGGALALATAASRKHVDIVTFLCDAGVVDTEGVAL-----------------------------------------------------------------QGGNANKGTRAYVNMDHGTLPKTYEEFVFQETPLVSTFNLGSFHAPRFARLLLEAGADATSGVRFPCDSDEGEEDEGFIGTPLDLATSYFRRFSPMKVHREIVRGLKGVIRLLRQEEAVHAVSWLW 1053
            MPSTLSKASGS + +IATTDIDRRCGD NQTPLMVASVIG SRVVRDLLRQGASVSVADSDGYTALHHAVYHKHLAVSK XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   LSAYGSLPL             RELV+WYGIDRCTSDGGALAL TAASRKHVDIVTFL DAGVVDTEGVAL                                                                 QGGNAN GTRAYVNMDHGTLP+TY+EFVFQETPLVSTFNLGSFHAP FARLLLEAGADATSGVRFPCDSDEGEEDEGFIGTPLDLATSYFRRFS M VHRE+V  LKGVIRLLRQEEAVH+VSW W
Sbjct:    7 MPSTLSKASGSADPTIATTDIDRRCGDTNQTPLMVASVIGPSRVVRDLLRQGASVSVADSDGYTALHHAVYHKHLAVSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSAYGSLPLYIMXXXXXXXXXXRELVYWYGIDRCTSDGGALALVTAASRKHVDIVTFLRDAGVVDTEGVALCAAIXWRCTMDIWKWSASLCIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIEGCSEACVYLLLRRQGGNANTGTRAYVNMDHGTLPETYDEFVFQETPLVSTFNLGSFHAPGFARLLLEAGADATSGVRFPCDSDEGEEDEGFIGTPLDLATSYFRRFSSMSVHREMVPELKGVIRLLRQEEAVHSVSWTW 423          
BLAST of mRNA_F-serratus_M_contig86.19980.1 vs. uniprot
Match: A0A6H5K1W5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1W5_9PHAE)

HSP 1 Score: 410 bits (1053), Expect = 8.690e-134
Identity = 269/361 (74.52%), Postives = 279/361 (77.29%), Query Frame = 1
Query:   25 SGSVECSIATTDIDRRCGDANQTPLMVASVIGSSRVVRDLLRQGASVSVADSDGYTALHHAVYHKHLAVSKDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNPLLSAYGSLPLGTAVYNGHLEVVRELVHWYGIDRCTSDGGALALATAASRKHVDIVTFLCDAGVVDTEGVAL------------------QGGNANKGTRAYVNMDHGTLPKTYEEFVFQETPLVSTFNLGSFHAPRFARLLLEAGADATSGVRFPCDSDEGEEDEGFIGTPLDLATSYFRRFSPMKVHREIVRGLKGVIRLLRQEEAVHAVSWLW 1053
            SGSVE  IATTDIDRRCGD NQTPLMVASVIGSSRVVRDLLRQGASVS+ADSDGY ALHHAVYHKHLAVSKD                               XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNPLLSA                   ELV+WYG D CTSDGGALALATAASR  VDIVTFLCDAGVVDTEGVAL                  QG  A+  +RAYVNMDHG+LP+TY+EFVFQE PLVSTFNLGSFHAPRFARLLLEAGADATSGVRFPCDSDEGEEDEGFIGTPLDLATSYFRRFSPM+VHRE+VRGLKGVIRLLRQEEAVH+VSW W
Sbjct:  399 SGSVERPIATTDIDRRCGDTNQTPLMVASVIGSSRVVRDLLRQGASVSLADSDGYPALHHAVYHKHLAVSKDLIEAGADLDARPGGIDTPLHVAATKGFCQEMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNPLLSADXXXXXXXXXXXXXXXXXXELVYWYGTDGCTSDGGALALATAASRNQVDIVTFLCDAGVVDTEGVALCAAIEGCSEACVYLLLRRQGRKASTDSRAYVNMDHGSLPETYDEFVFQEPPLVSTFNLGSFHAPRFARLLLEAGADATSGVRFPCDSDEGEEDEGFIGTPLDLATSYFRRFSPMRVHREMVRGLKGVIRLLRQEEAVHSVSWTW 759          
BLAST of mRNA_F-serratus_M_contig86.19980.1 vs. uniprot
Match: A0A6H5JNS0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNS0_9PHAE)

HSP 1 Score: 192 bits (487), Expect = 4.150e-54
Identity = 138/339 (40.71%), Postives = 163/339 (48.08%), Query Frame = 1
Query:  103 VASVIGSSRVVRDLLRQGASVSVADSDGYTALHHAVYHKHLAVSKDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNPLLSAYG--SLPLGTAVYNGHLEVVRELVHWYGIDRCTSDGGALALATAASRKHVDIVTFLCDAGVVDTEGVAL------------------QGGNANKGTRAYVNMDHGTLPKTYEEFVFQETPLVSTFNLGSFHAPRFARLLLEAGADATSGVRFPCDSDEGEEDEGFI-GTPLDLATSYFRRFSPM-KVHREIVRGLKGVIRLLRQEEAVHAVSWLW 1053
            VAS +G  RVVR LLR GA VS AD+DG TALH ++ +KHLAVSK                                                                         NP+L+AY   SLPL  A  NG L VVREL   +GID C+ DGGA AL  AAS+  VDIVTFL D GVVD EG+AL                  QG NAN   RAY NM H T    Y   +F +TPLVS F LG F++PR  RLLL AGAD  S VR+     EG E +  +  TPL +A S    +    +   ++  GLKGVIRLL+Q +AVHA SW W
Sbjct:   37 VASTMGYLRVVRVLLRLGARVSAADNDGATALHLSIVNKHLAVSK-------------------ALVKAGADLEARIDHHQALGVGCTPLHVAAAKGFHKGMVMLIHAGVKGFVGAKANPILAAYDGESLPLDVAAENGQLGVVRELEQRFGIDGCSCDGGAQALVEAASQNQVDIVTFLFDNGVVDAEGIALCAAVEGRREECIELLLRTQGCNANAIARAYANMTHDTTLPMYSNQLFPDTPLVSAFELGGFYSPRITRLLLGAGADVASRVRY-----EGIEGDCVMHDTPLTIAESTLPLWETYGETSEDVEFGLKGVIRLLKQVDAVHATSWCW 351          
BLAST of mRNA_F-serratus_M_contig86.19980.1 vs. uniprot
Match: A0A6H5KSL5_9PHAE (Uncharacterized protein n=2 Tax=root TaxID=1 RepID=A0A6H5KSL5_9PHAE)

HSP 1 Score: 154 bits (389), Expect = 1.380e-39
Identity = 124/378 (32.80%), Postives = 163/378 (43.12%), Query Frame = 1
Query:   22 ASGSVECSI-----ATTDIDRRCGDANQTPLMVASVIGSSRVVRDLLRQGASVSVADSDGYTALHHAVYHKHLAVSK---------DXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNPLLSAYGSLPLGTAVYNGHLEVVRELVHWYGIDRCTSDGGALALATAASRKHVDIVTFLCDAGVVDTEGVAL------------------QGGNANKGTRAYVNMDHGTLPKTYEEFVFQETPLVSTFNLGSFHAPRFARLLLEAGADATSGVRFPCDSDEGEEDEGFIGTPLDLA--TSYFRRFSPMKVHREIVRGLKGVIRLLRQEEAVHAVSWLW 1053
            +SGSVE ++       T+IDRRC +   T LM A+  G  R+VR LLR GA VSV+  DG+TALH A+  ++LAV+K         +                                                                        NPLL    + PL  A + GHL VV+ELV  +GID C  +G   AL TAA   H  I+TFL DAGV+DT+G AL                  +GG+ +   R Y N+D+            +E PL+  F  G  HAPR  R LL+ GAD  + VRF  +      DE  +   + L    +YF+     +V      GLKGV+RLL+QE AVHA SW W
Sbjct:   26 SSGSVERTLDLLSGGFTEIDRRCDEHGVTALMCAANKGYLRIVRVLLRFGADVSVSTDDGHTALHFAIGGRNLAVTKALIKAGAEVEAKADLVRMESEVVQGQTPLHLAAGEGFCEGMVALINAGANVDSRMSDGSTAMYIAACLGNLEAVEILFQKKANPLLRVGPTHPLDIATHGGHLGVVQELVQRFGIDGCADEGAIGALETAAYENHEAIMTFLLDAGVIDTDGTALCDAIEGRNEACLKLLVSRRGGSEHMVERNYTNIDNA-----------RENPLLCAFGTGRGHAPRITRFLLDHGADTKNKVRFGIEGLGEMIDEPLVAAKITLRHEQTYFKDADVDRVD-----GLKGVVRLLQQEAAVHANSWAW 387          
BLAST of mRNA_F-serratus_M_contig86.19980.1 vs. uniprot
Match: D8LH66_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH66_ECTSI)

HSP 1 Score: 134 bits (336), Expect = 4.260e-34
Identity = 70/80 (87.50%), Postives = 74/80 (92.50%), Query Frame = 1
Query:    1 MPSTLSKASGSVECSIATTDIDRRCGDANQTPLMVASVIGSSRVVRDLLRQGASVSVADSDGYTALHHAVYHKHLAVSKD 240
            MPSTLSKASGS++ +IATT IDR CGD NQTPLMVASVIGSSRVVRDLLRQGASVSVADSDG TALHH+VYH HLAVSKD
Sbjct:    1 MPSTLSKASGSIDPTIATTGIDRGCGDTNQTPLMVASVIGSSRVVRDLLRQGASVSVADSDGCTALHHSVYHNHLAVSKD 80          
BLAST of mRNA_F-serratus_M_contig86.19980.1 vs. uniprot
Match: D8LP44_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP44_ECTSI)

HSP 1 Score: 122 bits (306), Expect = 8.160e-28
Identity = 86/219 (39.27%), Postives = 103/219 (47.03%), Query Frame = 1
Query:  457 NPLLSAYGSLPLGTAVYNGHLEVVRELVHWYGIDRCTSDGGALALATAASRKHVDIVTFLCDAGVVDTEGVAL------------------QGGNANKGTRAYVNMDHGTLPKTYEEFVFQETPLVSTFNLGSFHAPRFARLLLEAGADATSGVRFPCDSDEGEEDEGFIGTPLDLATSYFRRFSPM--KVHREIVRGLKGVIRLLRQEEAVHAVSWLW 1053
            NP+L    + PL  A + GHL VV+ELV  +G+D C+ +G   AL TAA   H  I+TFL DAGV DT+G AL                  +GGNA+     Y N D              +  LV  F  G  +APR  R LL+ GAD    VRF      GE      G PL  A    R           E V GLK V+RLLRQE+AVHA SW W
Sbjct:  172 NPMLCVGPTHPLDIATHGGHLGVVQELVQRFGVDGCSDEGAIGALETAAYENHQTILTFLLDAGVKDTDGTALCDAIEGRSEACLKLLVGRRGGNAHMAESHYTNTDSAC-----------DNALVCAFGAGRGYAPRMTRFLLDHGADTKKKVRFEIKG-LGE----IAGGPLVAAKIILRHEQTHFEDADEEGVDGLKEVVRLLRQEDAVHANSWAW 374          
BLAST of mRNA_F-serratus_M_contig86.19980.1 vs. uniprot
Match: D7FVK3_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVK3_ECTSI)

HSP 1 Score: 99.4 bits (246), Expect = 1.810e-19
Identity = 82/217 (37.79%), Postives = 113/217 (52.07%), Query Frame = 1
Query:  457 NPLLS----AYGSLPLGTAVYNGHLEVVRELVHWYGIDRCTSD-GGALALATAASRKHVDIVTFLCDAGVVDTEGVALQGGNA---NKGTRAYVNMDHGTLPKTYEEFVFQ------ETPLVSTFNLGSFHA--PRFARLLLEAGADATSGVRFPCDSDEGEEDEGFIGTPLDLATSYFR-RFSPMK-VHREIVRGLKGVIRLLRQEEAVHAVSWLW 1053
            NPLL+    A+  LPL TA  NG L VV EL+  +GI  C    GG  AL  AA + H+D++  L  AGVVDT G+AL    +       +  +   +GT P     +V +       TPL+   ++G   +  P+  RLL++AGAD TS VRF             + TPL LAT   R + +  K +  E++R L+ + RLL + EAVHA SWLW
Sbjct:  172 NPLLTRVNLAWQHLPLDTAAQNGRLGVVLELLQRFGIRGCGGGTGGVTALQLAAMKPHMDVMLALTTAGVVDT-GIALVKATSFGHMDVVKFLLQQQNGT-PSEKSAYVSRPRDPCGRTPLICNIDVGLNQSCSPKVVRLLVDAGADTTSIVRFTIQPGTLP----VVCTPLSLATEALRIKIAYRKAIPDELLRRLELIRRLLLRVEAVHATSWLW 382          
BLAST of mRNA_F-serratus_M_contig86.19980.1 vs. uniprot
Match: D7FXY7_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXY7_ECTSI)

HSP 1 Score: 96.3 bits (238), Expect = 6.990e-19
Identity = 79/210 (37.62%), Postives = 107/210 (50.95%), Query Frame = 1
Query:  457 NPLLSAY------GSLPLGTAVYNGHLEVVRELVHWYGIDRCT-SDGGALALATAASRKHVDIVTFLCDAGVVDTEGVALQGGNANKGTRAYVNMDHGTLPKTYEEFVFQETPLVSTFN-LGSFHA---PRFARLLLEAGADATSGVRFPCDSDEGEEDEGFIGTPLDLATSYFRRFSPMKVHREIVRGLKGVIRLLRQEEAVHAVSWLW 1053
            +PLL+ +       SLPL  A   GHLEVV EL+   GI  C  S GG  AL  AA  KH+D++T L +AGVVDT G+A +G    +     V++  G   + +      E P    F+ +  +H    PR  RLL+EAGAD TS V  P D   G ++     TP+ L            +  E +  L+ + RLL + EA+HAVSWLW
Sbjct:   75 DPLLTPHLGTSERASLPLDVAAGLGHLEVVNELIRQVGIGGCGGSSGGVRALQQAARNKHLDMLTVLTNAGVVDT-GLA-RGRRIWRRGPLEVSVGAGKGEENHGWTCVCEHPQRCRFDAIACWHQRCRPRVVRLLVEAGADTTSTV--PIDGLPGTDNI----TPMGLTMLLLHDLGTEPLTEEQLNALEAIHRLLLRVEALHAVSWLW 276          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig86.19980.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
A0A6H5JHQ8_9PHAE4.790e-16282.93Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JL58_9PHAE4.270e-16088.89Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L5L0_9PHAE2.050e-13975.54Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K1W5_9PHAE8.690e-13474.52Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JNS0_9PHAE4.150e-5440.71Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KSL5_9PHAE1.380e-3932.80Uncharacterized protein n=2 Tax=root TaxID=1 RepID... [more]
D8LH66_ECTSI4.260e-3487.50EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
D8LP44_ECTSI8.160e-2839.27EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
D7FVK3_ECTSI1.810e-1937.79EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
D7FXY7_ECTSI6.990e-1937.62EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig86contigF-serratus_M_contig86:330710..331816 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeViruses
Seed ortholog score140.2
Seed ortholog evalue1.8e-30
Seed eggNOG ortholog654926.Q8QNQ8_ESV1K
Hectar predicted targeting categoryother localisation
GOsGO:0008150,GO:0010941,GO:0016032,GO:0019048,GO:0019050,GO:0019054,GO:0033668,GO:0035821,GO:0039526,GO:0042981,GO:0043067,GO:0043069,GO:0044003,GO:0044068,GO:0044403,GO:0044419,GO:0044531,GO:0044532,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051701,GO:0051704,GO:0051817,GO:0052040,GO:0052041,GO:0052150,GO:0052248,GO:0052433,GO:0052490,GO:0060548,GO:0065007
EggNOG free text desc.aspartic-type endopeptidase activity
EggNOG OGs4QB1T@10239,4QUVA@35237
COG Functional cat.S
Best tax leveldsDNA viruses, no RNA stage
Best eggNOG OGNA|NA|NA
Exons2
Model size1053
Cds size1053
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932527.0608833-CDS-F-serratus_M_contig86:330709..3310881622932527.0608833-CDS-F-serratus_M_contig86:330709..331088Fucus serratus maleCDSF-serratus_M_contig86 330710..331088 -
1690964350.3497376-CDS-F-serratus_M_contig86:330709..3310881690964350.3497376-CDS-F-serratus_M_contig86:330709..331088Fucus serratus maleCDSF-serratus_M_contig86 330710..331088 -
1622932527.0802608-CDS-F-serratus_M_contig86:331142..3318161622932527.0802608-CDS-F-serratus_M_contig86:331142..331816Fucus serratus maleCDSF-serratus_M_contig86 331143..331816 -
1690964350.369703-CDS-F-serratus_M_contig86:331142..3318161690964350.369703-CDS-F-serratus_M_contig86:331142..331816Fucus serratus maleCDSF-serratus_M_contig86 331143..331816 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig86.19980.1prot_F-serratus_M_contig86.19980.1Fucus serratus malepolypeptideF-serratus_M_contig86 330710..331816 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig86.19980.1

>prot_F-serratus_M_contig86.19980.1 ID=prot_F-serratus_M_contig86.19980.1|Name=mRNA_F-serratus_M_contig86.19980.1|organism=Fucus serratus male|type=polypeptide|length=351bp
MPSTLSKASGSVECSIATTDIDRRCGDANQTPLMVASVIGSSRVVRDLLR
QGASVSVADSDGYTALHHAVYHKHLAVSKDLIEAGADHEARHGGIDTPLH
VAATKGFCQGMVMLIDAGANVDSRLDDGATPLFLAASGGRLEAVRVLLRA
NANPLLSAYGSLPLGTAVYNGHLEVVRELVHWYGIDRCTSDGGALALATA
ASRKHVDIVTFLCDAGVVDTEGVALQGGNANKGTRAYVNMDHGTLPKTYE
EFVFQETPLVSTFNLGSFHAPRFARLLLEAGADATSGVRFPCDSDEGEED
EGFIGTPLDLATSYFRRFSPMKVHREIVRGLKGVIRLLRQEEAVHAVSWL
W
back to top

mRNA from alignment at F-serratus_M_contig86:330710..331816-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig86.19980.1 ID=mRNA_F-serratus_M_contig86.19980.1|Name=mRNA_F-serratus_M_contig86.19980.1|organism=Fucus serratus male|type=mRNA|length=1107bp|location=Sequence derived from alignment at F-serratus_M_contig86:330710..331816- (Fucus serratus male)
ATGCCATCAACTCTGAGCAAAGCCAGCGGTTCCGTCGAGTGTTCGATTGC TACGACCGACATCGACCGACGCTGTGGCGATGCGAACCAGACACCGCTGA TGGTGGCCTCCGTCATTGGTTCCTCGCGCGTTGTCAGAGACCTTCTGCGG CAGGGTGCCAGCGTCTCGGTAGCGGACAGCGACGGTTATACCGCTCTGCA CCACGCGGTTTATCATAAACACCTGGCCGTGAGCAAAGACCTGATCGAGG CGGGAGCGGACCATGAAGCGAGGCATGGTGGCATAGATACACCACTTCAT GTGGCCGCGACGAAAGGGTTTTGCCAAGGAATGGTGATGCTGATCGACGC AGGCGCGAACGTGGACAGCAGGCTCGACGACGGAGCAACACCTCTGTTTT TAGCGGCAAGCGGCGGGCGGCTCGAAGCGGTCAGGGTTCTCCTTCGGGCG AACGCGAATCCGCTCTTGTCAGCGTACGGAAGTCTCCCGCTAGGAACGGC GGTTTACAATGGGCATCTGGAAGTGGTCCGCGAGCTCGTGCATTGGTACG GAATCGATCGCTGTACAAGCGACGGCGGCGCACTGGCTCTCGCAACGGCC GCTTCTCGCAAACACGTGGACATCGTCACCTTCCTGTGCGATGCCGGTGT GGTTGATACGGAGGGCGTGGCCCTGTGTGCCGCCATTGAGGGATGTAGCG AGGCGTGCGTCTACCTTCTGCTGCGGAGACAGGGGGGAAATGCCAACAAA GGTACGCGTGCCTACGTCAATATGGACCACGGTACTCTCCCGAAAACCTA TGAGGAATTCGTGTTCCAAGAAACACCGCTGGTGAGCACATTCAATCTGG GAAGCTTTCATGCTCCCAGATTCGCGCGTTTGCTACTCGAAGCCGGGGCG GACGCGACATCGGGCGTTCGGTTTCCGTGCGACAGCGATGAGGGGGAAGA AGACGAAGGGTTCATCGGCACGCCCCTGGACTTGGCTACATCTTATTTTC GCAGATTCAGTCCAATGAAAGTTCACCGCGAAATAGTGCGGGGGCTGAAG GGTGTCATCCGCCTGCTGCGACAGGAGGAGGCAGTTCACGCGGTCTCTTG GCTGTGG
back to top

Coding sequence (CDS) from alignment at F-serratus_M_contig86:330710..331816-

>mRNA_F-serratus_M_contig86.19980.1 ID=mRNA_F-serratus_M_contig86.19980.1|Name=mRNA_F-serratus_M_contig86.19980.1|organism=Fucus serratus male|type=CDS|length=2106bp|location=Sequence derived from alignment at F-serratus_M_contig86:330710..331816- (Fucus serratus male)
ATGCCATCAACTCTGAGCAAAGCCAGCGGTTCCGTCGAGTGTTCGATTGC
TACGACCGACATCGACCGACGCTGTGGCGATGCGAACCAGACACCGCTGA
TGGTGGCCTCCGTCATTGGTTCCTCGCGCGTTGTCAGAGACCTTCTGCGG
CAGGGTGCCAGCGTCTCGGTAGCGGACAGCGACGGTTATACCGCTCTGCA
CCACGCGGTTTATCATAAACACCTGGCCGTGAGCAAAGACCTGATCGAGG
CGGGAGCGGACCATGAAGCGAGGCATGGTGGCATAGATACACCACTTCAT
GTGGCCGCGACGAAAGGGTTTTGCCAAGGAATGGTGATGCTGATCGACGC
AGGCGCGAACGTGGACAGCAGGCTCGACGACGGAGCAACACCTCTGTTTT
TAGCGGCAAGCGGCGGGCGGCTCGAAGCGGTCAGGGTTCTCCTTCGGGCG
AACGCGAATCCGCTCTTGTCAGCGTACGGAAGTCTCCCGCTAGGAACGGC
GGTTTACAATGGGCATCTGGAAGTGGTCCGCGAGCTCGTGCATTGGTACG
GAATCGATCGCTGTACAAGCGACGGCGGCGCACTGGCTCTCGCAACGGCC
GCTTCTCGCAAACACGTGGACATCGTCACCTTCCTGTGCGATGCCGGTGT
GGTTGATACGGAGGGCGTGGCCCTATGCCATCAACTCTGAGCAAAGCCAG
CGGTTCCGTCGAGTGTTCGATTGCTACGACCGACATCGACCGACGCTGTG
GCGATGCGAACCAGACACCGCTGATGGTGGCCTCCGTCATTGGTTCCTCG
CGCGTTGTCAGAGACCTTCTGCGGCAGGGTGCCAGCGTCTCGGTAGCGGA
CAGCGACGGTTATACCGCTCTGCACCACGCGGTTTATCATAAACACCTGG
CCGTGAGCAAAGACCTGATCGAGGCGGGAGCGGACCATGAAGCGAGGCAT
GGTGGCATAGATACACCACTTCATGTGGCCGCGACGAAAGGGTTTTGCCA
AGGAATGGTGATGCTGATCGACGCAGGCGCGAACGTGGACAGCAGGCTCG
ACGACGGAGCAACACCTCTGTTTTTAGCGGCAAGCGGCGGGCGGCTCGAA
GCGGTCAGGGTTCTCCTTCGGGCGAACGCGAATCCGCTCTTGTCAGCGTA
CGGAAGTCTCCCGCTAGGAACGGCGGTTTACAATGGGCATCTGGAAGTGG
TCCGCGAGCTCGTGCATTGGTACGGAATCGATCGCTGTACAAGCGACGGC
GGCGCACTGGCTCTCGCAACGGCCGCTTCTCGCAAACACGTGGACATCGT
CACCTTCCTGTGCGATGCCGGTGTGGTTGATACGGAGGGCGTGGCCCTAC
AGGGGGGAAATGCCAACAAAGGTACGCGTGCCTACGTCAATATGGACCAC
GGTACTCTCCCGAAAACCTATGAGGAATTCGTGTTCCAAGAAACACCGCT
GGTGAGCACATTCAATCTGGGAAGCTTTCATGCTCCCAGATTCGCGCGTT
TGCTACTCGAAGCCGGGGCGGACGCGACATCGGGCGTTCGGTTTCCGTGC
GACAGCGATGAGGGGGAAGAAGACGAAGGGTTCATCGGCACGCCCCTGGA
CTTGGCTACATCTTATTTTCGCAGATTCAGTCCAATGAAAGTTCACCGCG
AAATAGTGCGGGGGCTGAAGGGTGTCATCCGCCTGCTGCGACAGGAGGAG
GCAGTTCACGCGGTCTCTTGGCTGTGGACAGGGGGGAAATGCCAACAAAG
GTACGCGTGCCTACGTCAATATGGACCACGGTACTCTCCCGAAAACCTAT
GAGGAATTCGTGTTCCAAGAAACACCGCTGGTGAGCACATTCAATCTGGG
AAGCTTTCATGCTCCCAGATTCGCGCGTTTGCTACTCGAAGCCGGGGCGG
ACGCGACATCGGGCGTTCGGTTTCCGTGCGACAGCGATGAGGGGGAAGAA
GACGAAGGGTTCATCGGCACGCCCCTGGACTTGGCTACATCTTATTTTCG
CAGATTCAGTCCAATGAAAGTTCACCGCGAAATAGTGCGGGGGCTGAAGG
GTGTCATCCGCCTGCTGCGACAGGAGGAGGCAGTTCACGCGGTCTCTTGG
CTGTGG
back to top