mRNA_F-serratus_M_contig86.19969.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig86.19969.1
Unique NamemRNA_F-serratus_M_contig86.19969.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig86.19969.1 vs. uniprot
Match: A0A6H5K6C5_9PHAE (Cytochrome b5 heme-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6C5_9PHAE)

HSP 1 Score: 520 bits (1338), Expect = 5.220e-177
Identity = 294/493 (59.63%), Postives = 352/493 (71.40%), Query Frame = 2
Query:   35 MPDAETRRRTAVPVIEIKRLDPCVASKPHTYPGLAKGTRVLVTTGGPIADYAIAIAQSAGCSVTVLGSFPCSADPASRGATASPRECLVVEGSMTSPEACAKAVIGQELVLHAAAAEASRSFLEGTKNLLTAAAAAGVKGFVLASSASVVFDGQDLKEVSEDAPYANRFIDSVTAAVAEAERTVLSASRTVGSGGEESDKSGAGGGPAMLTCSIRAAPVYGPGQS-------EYLLPGLAARAKAGDRPVGDGSNVVDFVFAGNVAHALLLAAQKVLAPSGDGSDTSRSTGSVAAGRAFFVTDGEPVPFSDFAGRALNRLGYPGPDDAGSASGIPVVVAVILAFLLRVWAIVVSPFFEFRPTLTARRVAEESRTWRFDVSRARRELGYKPLWTQEEGLEISLHAAESLRNPMAKVKHVGPFTAEEVARHSTEDDAWIIVDGKVYDVTPYLDQHPGGEAILRNAGGDSTEGMHGPQHPGQALEILEQHFIGLLE 1492
            MP  +   + A PV+EIKRLDP V ++   YPGL +GT VLVT GG ++   +++ +SAGC+VTVLG         +R A+A P  C ++EGS  S E+CA AV GQ++V+HA    + R+  E TKNLL AAAAA VKGFV ASSASV+F GQDLK++SEDAPY +RF D   A +AEAE+ VL A+        +S +S       MLTCS+RAAP YG           + L+PGLA RA+AG RPVGDG+N VDFV+AGNVAHALLLAAQ +L  S   +          AGRAF VTD EPVP+ +FA RAL+RLGYP  D AGS  G+ V++A  LA LLRV A+VVSP FEFRP LTA RVAEES   R D SRAR  LGY PLW+QEEGL+I+LH A +LRNP AK+KH+GPFTAEEVARHS+EDDAWIIVDGKVYDVT YL QHPGG+AILRNAGGDSTEGMHGPQHP  A+EIL+  +IGLLE
Sbjct:    1 MPSTDAGEKDATPVVEIKRLDPGVVNRTREYPGLPRGTNVLVTAGGAVSAATVSLLESAGCTVTVLG--------VARAASAPPN-CNLIEGSALSRESCAIAVAGQDVVVHAGRPSSPRAVAEATKNLLQAAAAASVKGFVYASSASVLFGGQDLKQISEDAPYPSRFADPSAAYIAEAEKAVLEANA-------DSSRSS-----TMLTCSVRAAPSYGAADEGEEASSEDRLIPGLAFRARAGVRPVGDGNNAVDFVYAGNVAHALLLAAQSMLQASLATAXXXXXXXXAVAGRAFHVTDMEPVPYGEFAARALSRLGYP--DGAGSG-GMSVLLATALALLLRVLALVVSPVFEFRPALTALRVAEESAVRRLDTSRAREGLGYTPLWSQEEGLDITLHGATALRNPRAKLKHIGPFTAEEVARHSSEDDAWIIVDGKVYDVTSYLHQHPGGDAILRNAGGDSTEGMHGPQHPPSAMEILQTLYIGLLE 469          
BLAST of mRNA_F-serratus_M_contig86.19969.1 vs. uniprot
Match: D8LGB0_ECTSI (NAD dependent epimerase/dehydratase, putative (Partial) (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGB0_ECTSI)

HSP 1 Score: 426 bits (1096), Expect = 8.560e-141
Identity = 249/449 (55.46%), Postives = 306/449 (68.15%), Query Frame = 2
Query:   35 MPDAETRRRTAVPVIEIKRLDPCVASKPHTYPGLAKGTRVLVTTGGPIADYAIAIAQSAGCSVTVLGSFPCSADPASRGATASPRECLVVEGSMTSPEACAKAVIGQELVLHAA--AAEASRSFLEGTKNLLTAAAAAGVKGFVLASSASVVFDGQDLKEVSEDAPYANRFIDSVTAAVAEAERTVLSASRTVGSGGEESDKSGAGGGPAMLTCSIRAAPVYGPGQSE-------YLLPGLAARAKAGDRPVGDGSNVVDFVFAGNVAHALLLAAQKVLAPSGDGSDTSRSTGSVAAGRAFFVTDGEPVPFSDFAGRALNRLGYPGPDDAGSASGIPVVVAVILAFLLRVWAIVVSPFFEFRPTLTARRVAEESRTWRFDVSRARRELGYKPLWTQEEGLEISLHAAESLRNPMAKVKHVGPFTAEEVARHSTEDDAWIIVDGKVYDVT 1354
            M   +   + A PV+EIKRLDP V ++   YPGL +GT VLVT GG ++   +++ +SAGC+VTVLG         +R A+A P  C +V+GS  S E+CA AV GQ++V+HA   ++  + +  E TKNLL AAAAA VKGFV ASSASV+F GQDLK +SEDAPY +RF D   A +AEAE+ VL           E++   + G   MLTCS+RAAP YG    E        L+PGLA RA+AG RPVGDG+N VDFV+AGNVAHALLLAAQ +L  S              AGRAF VTD EP+P+ +FA RAL+RLGYP  D AG + G+ V++A  LA LLRV A+VVSP FEFRP LTA RVAEES   R D SRAR  LGY PLW+QEEGL+I+LH A +LRNP AK+KH+GPFTAEEVARHS+E+DAWIIVDGK +  T
Sbjct:    1 MTSTDAGEKDATPVVEIKRLDPSVVNRTRQYPGLPRGTNVLVTAGGAVSAATVSLLKSAGCTVTVLG--------VARAASAPPN-CTLVKGSALSRESCASAVAGQDVVVHAGRPSSPGAVAVAEATKNLLQAAAAASVKGFVYASSASVLFGGQDLKLISEDAPYPSRFADPPAAYIAEAEKAVL-----------EANVDSSSGSSTMLTCSVRAAPSYGAADEEGEASSEDRLIPGLAFRARAGVRPVGDGNNAVDFVYAGNVAHALLLAAQSMLQASXXXXXXXXXX--AVAGRAFHVTDMEPIPYGEFAARALSRLGYP--DGAGGSGGMSVLLATALALLLRVLALVVSPVFEFRPALTALRVAEESAVRRLDTSRAREGLGYTPLWSQEEGLDITLHRATALRNPRAKLKHIGPFTAEEVARHSSEEDAWIIVDGKYFYCT 425          
BLAST of mRNA_F-serratus_M_contig86.19969.1 vs. uniprot
Match: A0A836CIL1_9STRA (3-beta hydroxysteroid dehydrogenase/isomerase family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIL1_9STRA)

HSP 1 Score: 277 bits (709), Expect = 2.230e-82
Identity = 198/480 (41.25%), Postives = 262/480 (54.58%), Query Frame = 2
Query:   71 PVIEIKRLDPCVASKPHTYPGLAKGTRVLVTTGGPIADYAIAIAQSAGCSVTVLGSFPCSADPASRGATASPRECLVVEGSMTSPEACAKAVIGQELVLHA------AAAEASRSFLEGTKNLLTAAAAAGVKGFVLASSASVVFDGQDLKEVSEDAPYANRFIDSVTAAVAEAERTVLSASRTVGSGGEESDKSGAGGGPAMLTCSIRAAPVYGPGQSEYLLPGLAARAK-AGDRPVGDGSNVVDFVFAGNVAHALLLAAQKVLAPSGDGSDTSRSTGSVAAGRAFFVTDGEPVPFSDFAGRALNRLGYPGPDDAGSASGIPVVVAVILAFLLRVWAIVVSPFFEFRPTLTARRVAEESRTWRFDVSRARRELGYKPLWTQEEGLEISLHAAES--LRNPMAKVKHVGPFTAEEVARHSTEDDAWIIVDGKVYDVTPYLDQHPGGEAILRNAGGDSTEGMHGPQHPGQALEILEQHFIG 1483
            P I    L P V  KP  YPGL +   VLVT+G            ++  +  VL              T +     V+E   TS     + + G+++VLH       A +E    FL+ T+ LL AA++A VK FV AS ASVVF G DL+    D P A+  ID+ TAA++ AE+ V + +               G G A+ T  +R   +YG G ++ LLP LA  A+ A  + VG G NVVDF +AGNVAHA LLAA+ + A    GSD +       AG A   TD EPVP+  F G  L  LGY     + +A+ +P  VA  LA      A +       RP LT  R+   +R   +  + A   LGY P W++ E L+I+L +A++  LRNP A+V+ VGPF+A EVARH T DDAWIIVDGKVY VTPYL+QHPGG+AIL NAG DS+ G HGPQHP QA E+L++ ++G
Sbjct:    4 PEISYIELPPSVLRKPLEYPGLPQ--EVLVTSGA-----------NSCLTKAVLDLLQ----------TYTAANATVLEVGSTSDAGMEELLQGKDVVLHVGLPKADATSEELNRFLQQTEALLHAASSAKVKSFVFASVASVVFTGSDLRAAGADLPPASPCIDAHTAALSAAEQRVAAFN---------------GRGGALATAVVRHHNLYGAGDAD-LLPALAQHAREARMQVVGGGDNVVDFSYAGNVAHAHLLAARALAA---GGSDAA-----ALAGCAVVATDAEPVPYRQFVGGVLEGLGY----GSKAATSVPYAVAFSLALFFHAVAFMFGSVVALRPRLTLGRLKSLTRFQYYSGAAAHELLGYHPPWSRAEALQITLQSADARALRNPAARVRPVGPFSAAEVARHRTADDAWIIVDGKVYAVTPYLEQHPGGDAILNNAGADSSAGFHGPQHPAQAAEVLQEFYVG 432          
BLAST of mRNA_F-serratus_M_contig86.19969.1 vs. uniprot
Match: A0A4D9CSF7_9STRA (Cytochrome b5 heme-binding domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CSF7_9STRA)

HSP 1 Score: 241 bits (615), Expect = 1.050e-68
Identity = 181/467 (38.76%), Postives = 244/467 (52.25%), Query Frame = 2
Query:  149 RVLVTTG-GPIADYAIAIAQSAGCSVTVLGSFPCSADPASRGATASPRECLVVEGSMTSPEACAKAVIGQELVLHAAAAEASRS-------FLEGTKNLLTAAAAAGVKGFVLASSASVVFDGQDLKEVSEDAPYANRFIDSVTAAVAEAERTVLSASRTVGSGGEESDKSGAGGGPAMLTCSIRAAPVYGPGQSEYLLPGLAARAKAGDRP--VGDGSNVVDFVFAGNVAHALLLAAQKVLAPSGDGSDTSRSTGSVAAGRAFFVTDGEPVPFSDFAGRALNRLGYPGPDDAGSASGIPVVVAVI--LAFLLRVWAIVVSPFFEFRPTLTARRVAEESRTWRFDVSRARRELGYKPLWTQEEGLEISLHAA-ESLRNPMA---------KVKHVGPFTAEEVARHSTEDDAWIIVDGKVYDVTPYLDQHPGGEAILRNAGGDSTEGMHGPQHPGQALEILEQHFIG 1483
            R LVT G G +    +A+    GC VTV           ++G    PR  +VV G++      AKAV G E+V H AA  AS          + GT+ LL A+AAAGVK FV  SSASVV++G++   V E  P     +DS T   A+AE  VL+A+   G                M T +IR   ++GPG  ++  P L   A+ G     +G+G NV DF F GNVAHA LLAA+K+           R  G    G+AFFVT+  PVPF DF  + L   GYP P     A  + VV   +  +A LLR+  +       F+PT T  RV   +    + + +A+R LGY P W+QEE L +       +L NP A         K + V  +T ++V+RH+T  DAWI+VDGKVYDVT Y+D HPG +AILR  GGDS++G HGPQHP    +++ ++ IG
Sbjct:   72 RALVTGGNGFVGRRIVAMLLEQGCDVTVFD--------ITKGFEDEPRVKMVV-GNLVETADIAKAVEGIEVVYHVAAPHASHPPAVQFAVNVTGTRALLQASAAAGVKKFVFTSSASVVYEGENQAGVDESTPIPTASLDSYTKTKADAEALVLAANGQHG----------------MHTAAIRPHGIFGPGDRQFF-PVLVESARKGKTKYALGEGRNVADFTFVGNVAHAHLLAAEKL----------GRVPG--VDGQAFFVTNDAPVPFWDFLAQVLTGFGYPAPSVRLPAGLMTVVGGWMDGMATLLRMVGV------RFQPTFTRSRVQYLTTHHYYSIEKAKRLLGYAPAWSQEEALALCFQCMMPALANPRAPKPRRVTVKKGQSVPIYTVQQVSRHNTRGDAWIVVDGKVYDVTEYVDVHPGDDAILRFVGGDSSKGFHGPQHPVSVWDVIAEYEIG 494          
BLAST of mRNA_F-serratus_M_contig86.19969.1 vs. uniprot
Match: A0A5A8EDR9_CAFRO (Cytochrome b5 heme-binding domain-containing protein n=4 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8EDR9_CAFRO)

HSP 1 Score: 205 bits (521), Expect = 5.920e-55
Identity = 153/427 (35.83%), Postives = 226/427 (52.93%), Query Frame = 2
Query:  302 VEGSMTSPEACAKAVIGQELVLHAAAAE---ASRSFLE-----GTKNLLTAAAAAGVKGFVLASSASVVFDGQDLKEVSEDAPYANRFIDSVTAAVAEAERTVLSASRTVGSGGEESDKSGAGGGPAMLTCSIRAAPVYGPGQSEYLLPGLAARAKA--GDRPVGDGSNVVDFVFAGNVAHALLLAAQKVLAPSGDGSDTSRSTGSVAAGRAFFVTDGEPVPFSDFAGRALNRLGYPGPDDAGSASGIPVVVAVILAFLLRVWAIVVSPFFEFRPT---LTARRVAEESRTWRFDVSRARRELGYKPLWTQEEGLEISLHAAESL--------RNPMAKV-KHVGP-------FTAEEVARHSTEDDAWIIVDGKVYDVTPYLDQHPGG-EAILRNAGGDSTEGMHGPQHPGQALEILEQHFIGLLE 1492
            V G +  PE+   A+ G + V+H A+     AS + LE     GT+ LLT  A  GVK FVL SSASVVF G D     E  P  + F D  +   A+AE+ V +A              G+     +LT ++R   ++GP  ++ + PG+   +    G   +GDG+N+VDF + GNV H  +LA Q++ A +  G    +  GS  +G+AFFVT+ EP+PF  F  R    + YP      ++  IP  +A  +A L    A +V+     +PT   L+ +RVA       +   RA+  LGY P+W  ++ L ++  +  SL        R+P+ +V +   P       F+  EVA+H+T+ DAW+IVDGKV+DVT ++D HPGG +A+LRNAG D++EG HG QHP   +E L    IG +E
Sbjct:  114 VAGDLKDPESVRAALKGVKAVVHCASPHPQLASDAVLEAVIVDGTRELLTVCADEGVKSFVLTSSASVVFSGTDQPGADETVPIPSTFRDFYSVCKAQAEKIVCAA--------------GSSPSARVLTAAVRPHGIFGPRDTQAV-PGICEVSSTWRGKLVLGDGNNMVDFTYVGNVVHGHILALQRLHAEATSGKPGGKD-GSRISGKAFFVTNDEPLPFWSFVARVKAAMRYP-----AASVRIPYRLAHGIATLQEAVAGIVASMRGTKPTPLHLSPQRVAIAGTAHWYKCDRAKAALGYSPVWNMDQALALTAMSYPSLVYSGPGAVRSPIEQVDEECRPCDLPQMAFSRAEVAQHNTDGDAWLIVDGKVHDVTYFVDTHPGGPDAVLRNAGKDASEGFHGDQHPENVVETLADLRIGWVE 519          
BLAST of mRNA_F-serratus_M_contig86.19969.1 vs. uniprot
Match: A0A812ZSQ0_9DINO (NSDHL protein (Fragment) n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812ZSQ0_9DINO)

HSP 1 Score: 192 bits (487), Expect = 1.360e-50
Identity = 153/468 (32.69%), Postives = 223/468 (47.65%), Query Frame = 2
Query:  101 CVASKPHTYPGLAKGTRVLVTTG-GPIADYAIAIAQSAGCSVTVLGSFPCSADPASRGATASPRECLVVEGSMTSPEACAKAVIGQELVLHAAAAEA-SRSF-------LEGTKNLLTAAAAAGVKGFVLASSASVVFDGQDLKEVSEDAPYANRFIDSVTAAVAEAERTVLSASRTVGSGGEESDKSGAGGGPAMLTCSIRAAPVYGPGQSEYLLPGLAARAKAGDRPVGDGS--NVVDFVFAGNVAHALLLAAQKVLAPSGDGSDTSRSTGSVAAGRAFFVTDGEPVPFSDFAGRALNRLGYPGPD---DAGSASGIPVVVAVILAFLLRVWAIVVSPFFEFRPTLTARRVAEESRTWRFDVSRARRELGYKPLWTQEEGLEISLHAAESLRNPMAK-VKHVGPFTAEEVARHSTEDDAWIIVDGKVYDVTPYLDQHPGGEAILRNAGGDSTEGMHGPQHPGQALE 1459
            C  +  HT P      +V+VT G G +  + ++    AGC VTV                   R     E S+   +    A  G E+V H A+ +  SR+        + GT+N++ A  A GV   +  SSASV++DG +   V E  PY   F D      AEAER ++ A              G   G  ++T S+R   ++GP +   L+P L A AKAG   V  GS  N+VDF + GNV H  + AA+  +             GS A G+ +F+T+ +P+PF +F  R    LGY  P      G    +  +V  ILA L  V    ++    F P++        +  W +    A+R+L Y+P+W     L ++L + + L  P AK +     FTA EVA H++  D W+I+DG VYD+T Y+DQHPG +AI  NAGGD++EG HG QHP   ++
Sbjct:   62 CPITALHTIP-----KKVVVTGGSGFVGRHLVSALVQAGCDVTVFDL----------------RSTTFDEPSVKMLDQVTTAFKGAEVVFHVASPDPLSRNKAVFELVNINGTRNVVDACLANGVPRLIFTSSASVIYDGSNQSGVDETLPYPATFRDDYCRTKAEAERIIMEA--------------GPASGGKLVTVSVRPHGIFGP-RDPALVPRLTANAKAGRTKVAIGSTDNIVDFTYVGNVVHGHMRAAEAAV------------KGSPANGKTYFITNDDPLPFWEFMSRVCLGLGYQAPTLRLPYGFMLAVSYIVDGILASLNAVLGTKLA--ITFTPSVVQ---IAGTHHW-YSCEAAKRDLKYEPVWDMYSALLVTLRSFQHLAAPGAKPLPEFKTFTAAEVAEHNSLQDLWVIIDGDVYDLTEYVDQHPGKDAIGNNAGGDASEGFHGEQHPDHVVD 475          
BLAST of mRNA_F-serratus_M_contig86.19969.1 vs. uniprot
Match: A0A067CV26_SAPPC (Cytochrome b5 heme-binding domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CV26_SAPPC)

HSP 1 Score: 174 bits (440), Expect = 5.050e-44
Identity = 126/374 (33.69%), Postives = 186/374 (49.73%), Query Frame = 2
Query:  401 LEGTKNLLTAAAAAGVKGFVLASSASVVFDGQDLKEVSEDAPYANRFIDSVTAAVAEAERTVLSASRTVGSGGEESDKSGAGGGPAMLTCSIRAAPVYGPGQSEYLLPGLAARAKAGDRP--VGDGSNVVDFVFAGNVAHALLLAAQKVLAPSGDGSDTSRSTGSVAAGRAFFVTDGEPVPFSDFAGRALNRLGYPGPDDAGSASGIPVVVAVILAFLLRVWAIVVSPFFEFRPTLTARRVAEESRTWRFDVSRARRELGYKPLWTQEEGLEISLHAAESLRNPMA--------KVKHVGPFTAEEVARHSTEDDAWIIVDGKVYDVTPYLDQHPGGEAILRNAGGDSTEGMHGPQHPGQALEILEQHFIGLLE 1492
            +EGT+NLL A     V  F+  SSA V ++  D   V+E AP  + F D        AE  VL  +                  P++ T +IR   ++GP ++ Y+ P L A AKAG     VG G N VD  + GNV HALLLAA K+            S G+ +AG+A+F+T+  PV   D  G  L  +GY  P  A     +P  V ++ A      A  ++P       +T  ++    +   +   +A+R+LGY PL++ EEGL ++L      R P +          +    +T  +VA H+ E DAWIIV  KV+D+T Y++ HPGG +IL + GGD+T G +GPQHP    E + ++ IG ++
Sbjct:  145 VEGTRNLLDACEQFKVDRFLFVSSAGVAYEAIDQMNVNEAAPMPSSFRDDYCRTKFLAEELVLKRNS-----------------PSLRTTAIRPHGMFGPREAHYM-PSLLAAAKAGTTKYQVGAGQNRVDLTYVGNVVHALLLAADKL------------SPGAKSAGQAYFITNDAPVSLWDTIGHILMAMGYNPPSIA-----VPYGVCMLAA------ATGLAP-------VTTAKLPMLGQHHFYSCEKAKRDLGYAPLYSVEEGLTLTLATLTDARGPHSFEQFKPAYLTREYRKYTRAQVAMHNKEHDAWIIVKDKVFDITEYVEDHPGGLSILNDVGGDATVGFYGPQHPPTVAEHILEYLIGEID 470          
BLAST of mRNA_F-serratus_M_contig86.19969.1 vs. uniprot
Match: A0A1V9YKL1_9STRA (Sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating isoform X1 n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YKL1_9STRA)

HSP 1 Score: 168 bits (426), Expect = 4.000e-42
Identity = 128/374 (34.22%), Postives = 181/374 (48.40%), Query Frame = 2
Query:  401 LEGTKNLLTAAAAAGVKGFVLASSASVVFDGQDLKEVSEDAPYANRFIDSVTAAVAEAERTVLSASRTVGSGGEESDKSGAGGGPAMLTCSIRAAPVYGPGQSEYLLPGLAARAKAGDRP--VGDGSNVVDFVFAGNVAHALLLAAQKVLAPSGDGSDTSRSTGSVAAGRAFFVTDGEPVPFSDFAGRALNRLGYPGPDDAGSASGIPVVVAVILAFLLRVWAIVVSPFFEFRPTLTARRVAEESRTWRFDVSRARRELGYKPLWTQEEGLEISLHAAESLRNPMA--------KVKHVGPFTAEEVARHSTEDDAWIIVDGKVYDVTPYLDQHPGGEAILRNAGGDSTEGMHGPQHPGQALEILEQHFIGLLE 1492
            +EGT+N+L A     V+ FV  SSA V ++  D   V+E AP    F D        AE  VL  +                    + T +IR   ++GP ++ Y+ P L A AKAG     VG GSN+VD  + GNV HAL L A+++            S  +  AG+A+F+T+  PV   +  G  L  +GY  P  A        V   + AF   +    VSP     P L             +  ++A+R+LGY PL++ EEGL ++L    + R P +          +    +T  EVA H+ E DAWIIV  KVYD+T Y++ HPGG +IL +AGGD+T G +GPQHP    E + ++ IG LE
Sbjct:  143 VEGTRNVLDACEHFKVERFVFVSSAGVAYEAIDQTNVTEAAPVPVTFRDDYCRTKYLAEDLVLKRNSAT-----------------LRTAAIRPHGMFGPREAHYM-PSLLAAAKAGSMKFQVGTGSNLVDMTYVGNVVHALFLVAEQL------------SADAKCAGQAYFITNDAPVSLWETIGHILMAMGYHPPSIA--------VPYGLCAFAAALGLAPVSP--AKLPMLGQHHY--------YSCAKAKRDLGYAPLYSVEEGLTLTLATFAAARGPHSFEQFKPAYLQREYRKYTRAEVAVHNKETDAWIIVKDKVYDITEYVEDHPGGLSILNDAGGDATVGFYGPQHPPTVAEHILEYLIGELE 468          
BLAST of mRNA_F-serratus_M_contig86.19969.1 vs. uniprot
Match: A0A1V9Y8M4_9STRA (Sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating isoform X1 n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Y8M4_9STRA)

HSP 1 Score: 166 bits (420), Expect = 2.900e-41
Identity = 143/480 (29.79%), Postives = 219/480 (45.62%), Query Frame = 2
Query:  113 KPHTYPGLAKGTRVLVTTG-GPIADYAIAIAQSAGCSVTVLGSFPCSADPASRGATASPRECLVVEGSMTSPEACAKAVIGQELVLHAAAAE---ASRSFL-----EGTKNLLTAAAAAGVKGFVLASSASVVFDGQDLKEVSEDAPYANRFIDSVTAAVAEAERTVLSASRTVGSGGEESDKSGAGGGPAMLTCSIRAAPVYGPGQSEYLLPGLAARAKAGDRP--VGDGSNVVDFVFAGNVAHALLLAAQKVLAPSGDGSDTSRSTGSVAAGRAFFVTDGEPVPFSDFAGRALNRLGYPGPDDAGSASGIPVVVAVILAFLLRVWAIVVSPFFEFRPTLTARRVAEESRTWRFDVSRARRELGYKPLWTQEEGLEISLHAAESLRNPMAKVKHVGP---------FTAEEVARHSTEDDAWIIVDGKVYDVTPYLDQHPGGEAILRNAGGDSTEGMHGPQHPGQALEILEQHFIGLLE 1492
            K   Y  LA G RVLVT G G +  + +      GC+V +L            G +   +    V+  +   +   KAV   ++V H A       ++  L     EGT+NLL A     +  FV  SS+ V ++  D   + E+A     F D        AE  V+  +                    + T +IR   ++GP +  Y +P L A AKAG     VG GSN+ D  + GNV H L LAA++++  S               G+A+F+T+  P+   D  G  L  +GY  P  A     +PV +  + + L                +L+  ++ + S+   +  ++A+R+ GY PL++  EGL ++L +  S R P     H  P         +T  EVA+H TE DAWIIV GKV+D++ Y++ HPGG +IL + GGD+T G +GPQHP    E + ++ IG +E
Sbjct:   53 KSFEYKWLA-GKRVLVTGGNGFLGSHVVEGLIRIGCTVRLLD----------LGKSTDVKGVTFVQCDLRDKDQVLKAVEKVDVVFHCATPSPFSTNKKLLMDVNVEGTRNLLDACEQNKIDRFVFISSSGVAYEPVDQVNLDENASTPTAFRDYYCHTKFLAEELVMKRNSQ-----------------GLRTTAIRPCGMFGP-REVYYMPELLAAAKAGSMKYQVGSGSNMTDMTYVGNVVHGLFLAAEQLIPAS------------KTCGQAYFITNDSPLLLWDTVGDILMTMGYNPPSIA-----VPVALCSLASSL-------------GLTSLSPSKLLQLSQNHSYSCAKAKRDFGYAPLYSVAEGLSLTLPSYSSSRGPHT-FGHAKPAYLEREYRKYTRAEVAKHCTEQDAWIIVKGKVFDISEYVEDHPGGLSILNDVGGDATVGFYGPQHPPTVAEHILEYLIGEVE 472          
BLAST of mRNA_F-serratus_M_contig86.19969.1 vs. uniprot
Match: V9KZ26_CALMI (NAD(P) dependent steroid dehydrogenase-like protein n=1 Tax=Callorhinchus milii TaxID=7868 RepID=V9KZ26_CALMI)

HSP 1 Score: 138 bits (348), Expect = 1.660e-32
Identity = 102/280 (36.43%), Postives = 148/280 (52.86%), Query Frame = 2
Query:  407 GTKNLLTAAAAAGVKGFVLASSASVVFDGQDLKEVSEDAPYANRFIDSVTAAVAEAERTVLSASRTVGSGGEESDKSGAGGGPAMLTCSIRAAPVYGPGQSEYLLPGLAARAKAGDRP--VGDGSNVVDFVFAGNVAHALLLAAQKVLAPSGDGSDTSRSTGSVAAGRAFFVTDGEPVPFSDFAGRALNRLGYPGPDDAGSASGIPVVVAVILAFLLRVWAIVVSPFFEFRPTLTARRVAEESRTWRFDVSRARRELGYKPLWTQEEGLEISLHAAESLR 1240
            GTK ++ A   AGV+  VL SSASVVF+G DLK  SED PYA + ID  +      E+ VL A+          D++        +T +IR   ++GP Q  +L+P L   AK+G     +GDG N+VDF +  NV H L+LAA+  L P+           S   G+A+ +T+ EP+PF  F  + L  L Y  P        IP ++A  LAFLL +  +++ PF   +PT T  RVA       +   RA++ELGYKP+ +  EG++ ++ +   LR
Sbjct:   95 GTKTIIEACKEAGVQKLVLTSSASVVFEGTDLKNGSEDLPYAEKPIDYYSQTKILQEKEVLRANNP--------DEN-------FMTVAIRPHGIFGP-QDPHLVPVLVQAAKSGKMEFMIGDGKNLVDFTYVDNVVHGLILAAEN-LHPN-----------SPICGKAYHITNDEPIPFWTFLSQLLVGLNYEAPK-----YHIPYLLAYYLAFLLSLLVLILKPFVTIKPTFTPMRVALAGTFHYYSCERAKKELGYKPVVSLSEGVKNTVQSFTHLR 341          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig86.19969.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K6C5_9PHAE5.220e-17759.63Cytochrome b5 heme-binding domain-containing prote... [more]
D8LGB0_ECTSI8.560e-14155.46NAD dependent epimerase/dehydratase, putative (Par... [more]
A0A836CIL1_9STRA2.230e-8241.253-beta hydroxysteroid dehydrogenase/isomerase fami... [more]
A0A4D9CSF7_9STRA1.050e-6838.76Cytochrome b5 heme-binding domain-containing prote... [more]
A0A5A8EDR9_CAFRO5.920e-5535.83Cytochrome b5 heme-binding domain-containing prote... [more]
A0A812ZSQ0_9DINO1.360e-5032.69NSDHL protein (Fragment) n=1 Tax=Symbiodinium sp. ... [more]
A0A067CV26_SAPPC5.050e-4433.69Cytochrome b5 heme-binding domain-containing prote... [more]
A0A1V9YKL1_9STRA4.000e-4234.22Sterol-4-alpha-carboxylate 3-dehydrogenase, decarb... [more]
A0A1V9Y8M4_9STRA2.900e-4129.79Sterol-4-alpha-carboxylate 3-dehydrogenase, decarb... [more]
V9KZ26_CALMI1.660e-3236.43NAD(P) dependent steroid dehydrogenase-like protei... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig86contigF-serratus_M_contig86:39043..45991 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score432.6
Seed ortholog evalue2.5e-118
Seed eggNOG ortholog2880.D8LGB0
Preferred nameERG26
KEGG rclassRC01163
KEGG koko:K07748
KEGG ReactionR07494
KEGG Pathwayko00100,ko01100,ko01130,map00100,map01100,map01130
KEGG ModuleM00101
Hectar predicted targeting categoryother localisation
GOsGO:0000252,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0006066,GO:0006629,GO:0006694,GO:0006696,GO:0008150,GO:0008152,GO:0008202,GO:0008204,GO:0008610,GO:0009058,GO:0009987,GO:0012505,GO:0016020,GO:0016125,GO:0016126,GO:0016128,GO:0016129,GO:0016491,GO:0016614,GO:0016616,GO:0031984,GO:0042175,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044107,GO:0044108,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0046165,GO:0055114,GO:0071704,GO:0097384,GO:0098827,GO:1901360,GO:1901362,GO:1901576,GO:1901615,GO:1901617,GO:1902652,GO:1902653
EggNOG free text desc.3-beta-hydroxy-delta5-steroid dehydrogenase activity
EggNOG OGsCOG0451@1,KOG1430@2759
EC1.1.1.170
COG Functional cat.GM
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Exons4
Model size1904
Cds size1464
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig86.19969.1prot_F-serratus_M_contig86.19969.1Fucus serratus malepolypeptideF-serratus_M_contig86 39449..45957 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932525.1333241-UTR-F-serratus_M_contig86:39042..394481622932525.1333241-UTR-F-serratus_M_contig86:39042..39448Fucus serratus maleUTRF-serratus_M_contig86 39043..39448 -
1690964349.3756452-UTR-F-serratus_M_contig86:39042..394481690964349.3756452-UTR-F-serratus_M_contig86:39042..39448Fucus serratus maleUTRF-serratus_M_contig86 39043..39448 -
1622932525.2368042-UTR-F-serratus_M_contig86:45957..459911622932525.2368042-UTR-F-serratus_M_contig86:45957..45991Fucus serratus maleUTRF-serratus_M_contig86 45958..45991 -
1690964349.43149-UTR-F-serratus_M_contig86:45957..459911690964349.43149-UTR-F-serratus_M_contig86:45957..45991Fucus serratus maleUTRF-serratus_M_contig86 45958..45991 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932525.1496382-CDS-F-serratus_M_contig86:39448..396071622932525.1496382-CDS-F-serratus_M_contig86:39448..39607Fucus serratus maleCDSF-serratus_M_contig86 39449..39607 -
1690964349.3892298-CDS-F-serratus_M_contig86:39448..396071690964349.3892298-CDS-F-serratus_M_contig86:39448..39607Fucus serratus maleCDSF-serratus_M_contig86 39449..39607 -
1622932525.1777582-CDS-F-serratus_M_contig86:40248..403891622932525.1777582-CDS-F-serratus_M_contig86:40248..40389Fucus serratus maleCDSF-serratus_M_contig86 40249..40389 -
1690964349.3991773-CDS-F-serratus_M_contig86:40248..403891690964349.3991773-CDS-F-serratus_M_contig86:40248..40389Fucus serratus maleCDSF-serratus_M_contig86 40249..40389 -
1622932525.210789-CDS-F-serratus_M_contig86:40845..415661622932525.210789-CDS-F-serratus_M_contig86:40845..41566Fucus serratus maleCDSF-serratus_M_contig86 40846..41566 -
1690964349.409798-CDS-F-serratus_M_contig86:40845..415661690964349.409798-CDS-F-serratus_M_contig86:40845..41566Fucus serratus maleCDSF-serratus_M_contig86 40846..41566 -
1622932525.2237616-CDS-F-serratus_M_contig86:45514..459571622932525.2237616-CDS-F-serratus_M_contig86:45514..45957Fucus serratus maleCDSF-serratus_M_contig86 45515..45957 -
1690964349.422174-CDS-F-serratus_M_contig86:45514..459571690964349.422174-CDS-F-serratus_M_contig86:45514..45957Fucus serratus maleCDSF-serratus_M_contig86 45515..45957 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig86.19969.1

>prot_F-serratus_M_contig86.19969.1 ID=prot_F-serratus_M_contig86.19969.1|Name=mRNA_F-serratus_M_contig86.19969.1|organism=Fucus serratus male|type=polypeptide|length=488bp
MPDAETRRRTAVPVIEIKRLDPCVASKPHTYPGLAKGTRVLVTTGGPIAD
YAIAIAQSAGCSVTVLGSFPCSADPASRGATASPRECLVVEGSMTSPEAC
AKAVIGQELVLHAAAAEASRSFLEGTKNLLTAAAAAGVKGFVLASSASVV
FDGQDLKEVSEDAPYANRFIDSVTAAVAEAERTVLSASRTVGSGGEESDK
SGAGGGPAMLTCSIRAAPVYGPGQSEYLLPGLAARAKAGDRPVGDGSNVV
DFVFAGNVAHALLLAAQKVLAPSGDGSDTSRSTGSVAAGRAFFVTDGEPV
PFSDFAGRALNRLGYPGPDDAGSASGIPVVVAVILAFLLRVWAIVVSPFF
EFRPTLTARRVAEESRTWRFDVSRARRELGYKPLWTQEEGLEISLHAAES
LRNPMAKVKHVGPFTAEEVARHSTEDDAWIIVDGKVYDVTPYLDQHPGGE
AILRNAGGDSTEGMHGPQHPGQALEILEQHFIGLLET*
back to top

mRNA from alignment at F-serratus_M_contig86:39043..45991-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig86.19969.1 ID=mRNA_F-serratus_M_contig86.19969.1|Name=mRNA_F-serratus_M_contig86.19969.1|organism=Fucus serratus male|type=mRNA|length=6949bp|location=Sequence derived from alignment at F-serratus_M_contig86:39043..45991- (Fucus serratus male)
CCTTTCGGATCGCGCCGAATGTAGTGTGGACAAGATGCCTGACGCAGAAA CAAGGAGAAGAACTGCAGTGCCGGTAATCGAAATCAAGCGACTTGACCCG TGCGTGGCCAGTAAGCCACACACATATCCAGGACTAGCGAAAGGCACAAG AGTTCTGGTAACGACAGGAGGCCCTATCGCCGACTATGCCATAGCAATTG CCCAGTCCGCGGGCTGCTCTGTTACTGTCCTGGGCTCGTTCCCTTGCTCT GCTGACCCTGCTTCTCGAGGCGCCACTGCTTCCCCCCGTGAATGTCTTGT TGTAGAGGGGAGTATGACTAGCCCCGAAGCTTGCGCCAAGGCGGTCATTG GACAAGAATTAGTTCTGCATGCGGCTGCGGCAGAGGCGTCCCGAAGCTTT CTCGAGGGAACAAAGAACTTGCTCACGGCAGCCGCCGCCGCGGGCGTGAA GGGCTTTGTTTTGGCCAGCTCCGCTAGGTGAGGACCTTGGGTATAGACTA TTGTTGGTGTTCCGTCAGGGTGCGGCGTGCTTAGCAATCGATCAAACTGC GCGAGCGTGCTTCTGATCGGACTGGGTAGCCACATACAAAGCCAGAACAT TCCAGTTATTCAGCGAAGTTTATGTACCACAACTGTTGAAGCAATATTTT TCTTTAAAAAATACTAATAATATGAATACAGCGTGTGTGTGTGTGTGTGT TGTCATCACCCGTTTATTATTCTGGACGTCAATTTTGTGGACGTACCAGC GGGGGTCACACAGGAGGATGGTCACGCAGGCTTTCTCCGCCTTCCCTCTG CGGTGCTTGCCTTAATTTTTCTCAACCGTTCCTTACCCTCGTCGACCGTG AAGTCGAATTTTGTGTACTAACGATTTAATCGTTCTCCACATGTTCGGCA GCTATACTGTATTTTTTTGAAGAAAATACAGAACGCAGCTAGACTGTACG CTTACGGCCGATGGACCTCTAATTACCATCCTGCCTGTGGTCACAAAGGA TCTTCCCATCTCTCCCCGGTGTACCTTGAAAAGTCGAGGACGCGAGTAAA GCAGCGTCCAATCATCGTTCGTCAAATTGTATGTAAACAGACGCTCTTCC CTTTGTGTTTCTGGCCAACGCGGGGCCATAGCTAAGTCCGAGCATGAGGA GCATCTGTGCGTCGTAGCCCTGACAAGTTGGAGCGAGGAACTCAGTTCTT TCCGCGTGCCTCTTACCTCCTTGTGTGATCTCCTACTTTTCGTCTACTTC CAGGTGAGTACGGATTCGTGTACTTGGATTATGCCTACATCGCCGTGGTC CTCTGTAATCGTTTCAAATGTTGTATTGGATTCGTCTTTATTGTTTGATG ATGTACTACCTGTTGTTTTGTCTTTGCTGTTTTTATGGTGTCCCTGCATG GCGACCAATGTAAGTGTACAGTACAACGGTGGGCTTCTCCCCGATATTAT ACTGTTGACCCAACGGTACTACAATAGGGGAACCCGTTTGAATGCCATGA AGAGGTTTTGTATTTGCAGCCTTTGAGCCGACCTGAACATTTTGACATTT TTTCCCCCTGACTGGGGGATGCTCAGAAGGTCTAGTTGCGTTCTGTATTT TCTTCAAATACAGCGCTGCGGTAGGATTGCTGATCTTTTGTCATAGTATA TGGTACATATATAGTCTAGTACGCCAAAGAAGATCGTAAGAGCTTTTAGC GTCAACCGGAGGGAGATGGGCAAACTCGTCCGGGCCCAGAGGCGGAACAA GCAACTTCAGTGGTTGACTGGTCCAATCAGTTAAAGAAACAACTGCATCG GTACTATATGTATGGTCACACATATAGCAAGAGTATGGATCAACCGGGTA AGGTCGCCAGTCCTGCACGTGATCAGCTGAACAGGAAAAATGAATATTTC CCTGTCCGGGTTCGTGCCTGAGAATTTGGTCTCGCAAGACGGGTTTGGCA GTCCCGTCCCGCGTCAGCCTGCTCATCTCCATACGAAGTACATATTCAGG CTGAATCTGGTGCTTACTTACGGGATTCCTCCCGAGTTCCGTGGCGGCGT CCATTTTTCATTTATAACCGCCATACGCCATCGGGTCAGTCCCGAGTTTA TCGGGTCACGCAACTGCGTACCGATGGCGTTCACTGTCGAGAGTCCGCCG GCACGGGGCCAGTAAACCTCAAGGTAGTTCCGAACGAGCGCTGCCTTAAC AAGGTCACCGTGGACCAGTTGATACTCGCCTCTCTTTCCCACATCCACTA ATGGTACGAAGTGGGCATGTTGAAAGTACCGACTGAATATGATAGATCGA TTGATTGAATTCTCACATGAGCTGATGTAAAAAATCCAGCCCGTGGTCAC AAGGTAAAAAACACCAGTCGGGAGGAAAGAACGTACGACGTACTCTCCGT ACAAAGAGAAAGCGGAACTGGTACAAAAAATACTCGGAAAAGCGACATCT CCAAAATAAACAAAAAAGAAAAAGAAAGAAACACGTGTGGCTACCGGGGC GCCTGCACATCGAAGGACGATTGAACGAAGGGCCGCGGCTTCAACGAAAG CATAAAGACGAGAAACGAAGCAAAGCAAAACAAAACAAAATACACGTAAC ACCAGAAAGACGTCGCGACATCTGCAAACCAAACACCCGGAGGATACAAG TTCGCGCCACTTGTGGCTAGTCAACATGGGCGAGCGAACCAGAACGAGCT CGCTTGCTTTGGGCTATCCTCTTCTTGGTCCTTCCCGTCACGTTCGGGCA TACGACTACATGCCGTAGTCCAGCCTTGGCTTTCTCTGCAACGATCCATC TCGCCATGAAATGTTCCGCCCCTTGTTCTGCCGTTCTGCCCCATTCCCCG TCGTCCTGGGCTGCAGTCGTCCACTGGTCGGCGTTGATGCCGAAAGCTCT GAGATCGTCCAGGAAACACCCCGTCCACTCTTTTTCCTGGCCTCCCACAC GGCCCGCACCCCCCATCATTTCTCCGAGCATCACGCGCTTCGACAGTCTC GTATCCTCCATGCGCGCCACAAATCCCGCAAACAAGATCCGCCTCCTGCG TAAAGTCGCCTCGGTGCTCTCACTTCCCGTCTTGAGAATCGTGTCCAGAT AGGAAATCGGGTGGTCGGCGCGATTGTGCTTTCGTCAACCGATACAGCGA GTCAAGAACCTGTGGTGGGCTTGGCGCAGCGTGTCGTAGTGGCACGCGTG CGGGTTCCACGTGACGCAGCCGTACAACATTGTCTCGAGTACCTCGGCTC TTAGCATCCGTATTTTGAGCTCGAGGGGAGCGCTCGGTCGGTAGTACACT TCGAGGCTGTACTTCCGAAAGCTGCACCATGCGTTGCGTATGCGCCGGTC GACCTCGATGAACAGGTGGTTATTGTGGTCGACGTTTCCCACGAGGTATA CAAACTCGTTCGTCTGACAGTTTATGTGTGTATGGCTATCACATATAGCA AGAGTAAGGTAGCTTAGAGGTACCTCGTAACCCTCGAACACGTTGGGACG TGAGTTCGATCCCGGCAAACGGTATTTTTCTCACTAAAAACTAAAAACTA AAAACTAAATATAAAAATGCTCAACGGGTGGAGAACGATTAATTTGTTAG TACACAAAATTCGACTTCACGGTCGACGAGGGAAAGGAATGGCTGAATCC TTCTCGCGATAAAAATTAAGGCACGCACCGCAGAAGAAAGGTGGATGAAA AATCCTGTGTGACCTTCCTCCTGTGTGACCCCGGCTGGTACGTCCATTGA TGTCCAGAATAGATGGGAAGAAAACACAACAAAGAAAACACACACAGGGA TCAACCGGGTAAGGTTGCCAATCCTGCTCGTGGTCAACTGAACAGGGAAA ATTAATATTTTCCTATCCCCGTTCGCCCCTGAGAAATTGGTCTCGCGAAA TAGGTTCGGCAGTCTCGTCCTGCGTCAGCGTGCTCATCTCCATACTCAGG TTGAATCTGGCGCTTACTTGCGGGATTCCTCCCGATTTCCGCGCCGGCGT CCATTTATTTATTTAAACCGCGGATACGCCATCGGGTCAATCCCGAGTTT ACCGGGTCACGCAATTGCGTAGCGATGCCGTTCACTGCCGAGAGTCCGCC GGCACATGGCCAGTAAACCTCAAGGTAGTTTCAGTAACGGGTACTGCCTT TGCATCACCACGGACCAATTAATATGCCTCTCTTTCCCTCGCCCACTTTA AGTATGGAGTGGGCATGTTGAAAGTATCAGCGGTGTAATCATTGCTGACT ACGTACGTGTAAGTAGTGGCACTTGGGTACTGCACGGTACTGCACGAGTA CCCTGCCCCGCCCAGCACTCTCGTCGTAAACCAACTGACGCCCTTCCCCA TCCTCTGCACCGTTCCGCCTCCGGTTATGCCCCTCTGTTACAAATTGCTC TGTCCCATTCTGCTCAACGGGGCAGCGTGGTTTTTGACGGTCAAGACCTG AAAGAGGTTTCAGAGGACGCGCCCTACGCAAACCGTTTCATCGACTCTGT TACAGCGGCAGTGGCGGAGGCGGAGAGGACGGTACTGAGCGCCAGCCGTA CAGTGGGAAGCGGCGGCGAAGAGTCGGATAAGTCGGGGGCTGGAGGCGGG CCAGCCATGTTGACGTGCAGCATCCGCGCGGCCCCGGTGTACGGCCCGGG GCAATCAGAGTATCTCTTGCCGGGGCTCGCGGCTCGCGCAAAGGCAGGGG ATCGCCCGGTCGGCGATGGAAGTAACGTAGTAGATTTCGTCTTCGCGGGC AACGTGGCTCACGCACTATTGCTCGCAGCGCAGAAGGTACTAGCTCCGTC AGGAGACGGTTCCGACACTTCTCGGAGCACAGGCTCGGTGGCGGCAGGGC GTGCCTTTTTTGTAACCGACGGGGAGCCAGTTCCGTTCAGTGACTTCGCT GGTCGCGCACTCAATCGGCTGGGCTACCCCGGGCCCGACGATGCGGGCAG CGCCTCGGGGATACCGGTGGTGGTTGCGGTTATACTTGCCTTCCTGCTTC GAGTCTGGGCGATAGTGGTGTCGCCATTCTTTGAGTTCCGACCGACCCTG ACGGCGCGTCGCGTGGCGGAGGAAAGCAGAACCTGGCGGTTTGACGTATC TCGTGCAAGGAGAGAGCTCGGGTACAAACCTTTGTGGACCCAGGAGGTGA GGTTTGCGGTCACGGGGGTTCAGTTTCTCGGAGGGCGAAGAGGGGACCCA GTGCTTACCGCTCCGAAGACAAGTAGGGGGTGGTAACCCTTGAAACGCCA TCAGGTGTATTGAGGATCGAGCGCATACTTGAGCGCGCAAACCCTGCTGT TTGAACTACATGGGGAATATAAATATTTGTGTTTGCCTCCGAGGCCTCCT GCGAGGAGTGCTGGTATCGAGCTAATGCAACTTTGTTCTGGAGCCCAAAA ATAAGCCTGACGTCTCTGCGCAGAGCCAGTTTGAGCCACCAGCAAATCAG CAAATGCATGGAGGACTCCCGTTTCGAACTCCCAAGAAAATGGAGGCACT TGCTCCTCACGCTGCTGGTTGTATCTGGAAAAACATTGTTGTGCTTTACC CCCTCGATCCCAGCCACTTGATGCCTTTGTTTGCGTTCCCTCGTTGAGAC AGGAAGGCCTGGAGATTTCGTTGCACGCGGCAGAGAGTCTCCGAAATCCT ATGGCGAAGGTGAAGCATGTAGGTCCATTCACGGCGGAGGAGGTGGCTCG ACACTCTACTGAGGACGATGCTTGGATCATTGTCGATGGCAAGGTGGGTC ACTCAATCTTATCGAAGCGCATCTTTCTGGAGCAACAGCTACGATGTTTC CAGCCGGGTTTCGCGCTTGCGCAATCTTGTCGGGGATGCTTTTGCGGTTG GTTGTTTGTGGACCTGCTACTGCTTCCGTGACTACTTTCTCTTTTGTCGA TATCATTTCAAGCCAGATTTCTTCGACGACTTAGAGGCCTTACGTCGGCA TACGTTGGCAGAACCTCTAGAGAGTCGTTATCATTTGGCCTTTGCCGTAT ACGGATTATATACTTACTTTAGTCACGATGTCACGGTGCTCATAGCAGTC TCCGGTTCGTAATGGAATTTGTAGCAAACAGCCTTGGGTCGAGAACCTCG CTGGGACAAACTACTATAATAATAGTAGTCGTAGTGGTGGATGTTGGATT CGAGTCAGGCAAAAAAAGTGGCATTCGCTATGAATTGTTGTATATCAGAG CGCTCTAGACTAAACGAACGACCAAACAGGTAGGAATCAGCTTTTATTTT TCACACGTCCTACCAACTACCGTGAAGCCACGTACATAAAATCCGCGAGT ACCATAGATACGTTGCTTAGTCCAAAAGCTTTTAATCGTAAATGAGCTTG GTGTCATTTTCGATATCCGTCGCTTCCCCCTCAGGTGTATGACGTCACGC CATACCTCGACCAGCACCCGGGCGGAGAAGCGATCCTCCGAAACGCCGGT GGAGATTCGACGGAAGGGATGCACGGCCCACAACATCCCGGCCAAGCGCT GGAGATCTTGGAGCAGCACTTTATCGGACTACTGGAGACTTAGATATTTT CCCGTCGTGAATGCGTGCGGTAATCGCAGGCGGTCTCAGCTGAGCGTCCC TGACCGCTGCGCCGGGTATTTGAATCAGCCTTCTGCTGAGGGGCATTCGT AGCGCGGCTCCCATGAGGGCTCTTGACAAGAAGATTTGTCCATGGAACTA CTACGGTACTTACGAGGAATCATATATATTCCATGCCTTACATTCCATCG TGCTTTCCGTGGTGATGTGTACCAAGTATTTTGCTCAAGAATGCATGAGA ACGACCTCGCAACGAAGACTCGGGGTCAAACGGTTTCACGAATATGGCCG ACCGGGTGGGTTTCTTCGGCTTCGAAAGCCTCCTCGCATGGGAAAACTCT GTTGCGAAGCGACTGATGTTATGATAAAAAATAGACTAGCGCGCTCGGC
back to top

Coding sequence (CDS) from alignment at F-serratus_M_contig86:39043..45991-

>mRNA_F-serratus_M_contig86.19969.1 ID=mRNA_F-serratus_M_contig86.19969.1|Name=mRNA_F-serratus_M_contig86.19969.1|organism=Fucus serratus male|type=CDS|length=2928bp|location=Sequence derived from alignment at F-serratus_M_contig86:39043..45991- (Fucus serratus male)
ATGCCTGACGCAGAAACAAGGAGAAGAACTGCAGTGCCGGTAATCGAAAT
CAAGCGACTTGACCCGTGCGTGGCCAGTAAGCCACACACATATCCAGGAC
TAGCGAAAGGCACAAGAGTTCTGGTAACGACAGGAGGCCCTATCGCCGAC
TATGCCATAGCAATTGCCCAGTCCGCGGGCTGCTCTGTTACTGTCCTGGG
CTCGTTCCCTTGCTCTGCTGACCCTGCTTCTCGAGGCGCCACTGCTTCCC
CCCGTGAATGTCTTGTTGTAGAGGGGAGTATGACTAGCCCCGAAGCTTGC
GCCAAGGCGGTCATTGGACAAGAATTAGTTCTGCATGCGGCTGCGGCAGA
GGCGTCCCGAAGCTTTCTCGAGGGAACAAAGAACTTGCTCACGGCAGCCG
CCGCCGCGGGCGTGAAGGGCTTTGTTTTGGCCAGCTCCGCTAGATGCCTG
ACGCAGAAACAAGGAGAAGAACTGCAGTGCCGGTAATCGAAATCAAGCGA
CTTGACCCGTGCGTGGCCAGTAAGCCACACACATATCCAGGACTAGCGAA
AGGCACAAGAGTTCTGGTAACGACAGGAGGCCCTATCGCCGACTATGCCA
TAGCAATTGCCCAGTCCGCGGGCTGCTCTGTTACTGTCCTGGGCTCGTTC
CCTTGCTCTGCTGACCCTGCTTCTCGAGGCGCCACTGCTTCCCCCCGTGA
ATGTCTTGTTGTAGAGGGGAGTATGACTAGCCCCGAAGCTTGCGCCAAGG
CGGTCATTGGACAAGAATTAGTTCTGCATGCGGCTGCGGCAGAGGCGTCC
CGAAGCTTTCTCGAGGGAACAAAGAACTTGCTCACGGCAGCCGCCGCCGC
GGGCGTGAAGGGCTTTGTTTTGGCCAGCTCCGCTAGCGTGGTTTTTGACG
GTCAAGACCTGAAAGAGGTTTCAGAGGACGCGCCCTACGCAAACCGTTTC
ATCGACTCTGTTACAGCGGCAGTGGCGGAGGCGGAGAGGACGGTACTGAG
CGCCAGCCGTACAGTGGGAAGCGGCGGCGAAGAGTCGGATAAGTCGGGGG
CTGGAGGCGGGCCAGCCATGTTGACGTGCAGCATCCGCGCGGCCCCGGTG
TACGGCCCGGGGCAATCAGAGTATCTCTTGCCGGGGCTCGCGGCTCGCGC
AAAGGCAGGGGATCGCCCGGTCGGCGATGGAAGTAACGTAGTAGATTTCG
TCTTCGCGGGCAACGTGGCTCACGCACTATTGCTCGCAGCGCAGAAGGTA
CTAGCTCCGTCAGGAGACGGTTCCGACACTTCTCGGAGCACAGGCTCGGT
GGCGGCAGGGCGTGCCTTTTTTGTAACCGACGGGGAGCCAGTTCCGTTCA
GTGACTTCGCTGGTCGCGCACTCAATCGGCTGGGCTACCCCGGGCCCGAC
GATGCGGGCAGCGCCTCGGGGATACCGGTGGTGGTTGCGGTTATACTTGC
CTTCCTGCTTCGAGTCTGGGCGATAGTGGTGTCGCCATTCTTTGAGTTCC
GACCGACCCTGACGGCGCGTCGCGTGGCGGAGGAAAGCAGAACCTGGCGG
TTTGACGTATCTCGTGCAAGGAGAGAGCTCGGGTACAAACCTTTGTGGAC
CCAGGAGCGTGGTTTTTGACGGTCAAGACCTGAAAGAGGTTTCAGAGGAC
GCGCCCTACGCAAACCGTTTCATCGACTCTGTTACAGCGGCAGTGGCGGA
GGCGGAGAGGACGGTACTGAGCGCCAGCCGTACAGTGGGAAGCGGCGGCG
AAGAGTCGGATAAGTCGGGGGCTGGAGGCGGGCCAGCCATGTTGACGTGC
AGCATCCGCGCGGCCCCGGTGTACGGCCCGGGGCAATCAGAGTATCTCTT
GCCGGGGCTCGCGGCTCGCGCAAAGGCAGGGGATCGCCCGGTCGGCGATG
GAAGTAACGTAGTAGATTTCGTCTTCGCGGGCAACGTGGCTCACGCACTA
TTGCTCGCAGCGCAGAAGGTACTAGCTCCGTCAGGAGACGGTTCCGACAC
TTCTCGGAGCACAGGCTCGGTGGCGGCAGGGCGTGCCTTTTTTGTAACCG
ACGGGGAGCCAGTTCCGTTCAGTGACTTCGCTGGTCGCGCACTCAATCGG
CTGGGCTACCCCGGGCCCGACGATGCGGGCAGCGCCTCGGGGATACCGGT
GGTGGTTGCGGTTATACTTGCCTTCCTGCTTCGAGTCTGGGCGATAGTGG
TGTCGCCATTCTTTGAGTTCCGACCGACCCTGACGGCGCGTCGCGTGGCG
GAGGAAAGCAGAACCTGGCGGTTTGACGTATCTCGTGCAAGGAGAGAGCT
CGGGTACAAACCTTTGTGGACCCAGGAGGAAGGCCTGGAGATTTCGTTGC
ACGCGGCAGAGAGTCTCCGAAATCCTATGGCGAAGGTGAAGCATGTAGGT
CCATTCACGGCGGAGGAGGTGGCTCGACACTCTACTGAGGACGATGCTTG
GATCATTGTCGATGGCAAGGAAGGCCTGGAGATTTCGTTGCACGCGGCAG
AGAGTCTCCGAAATCCTATGGCGAAGGTGAAGCATGTAGGTCCATTCACG
GCGGAGGAGGTGGCTCGACACTCTACTGAGGACGATGCTTGGATCATTGT
CGATGGCAAGGTGTATGACGTCACGCCATACCTCGACCAGCACCCGGGCG
GAGAAGCGATCCTCCGAAACGCCGGTGGAGATTCGACGGAAGGGATGCAC
GGCCCACAACATCCCGGCCAAGCGCTGGAGATCTTGGAGCAGCACTTTAT
CGGACTACTGGAGACTTAGGTGTATGACGTCACGCCATACCTCGACCAGC
ACCCGGGCGGAGAAGCGATCCTCCGAAACGCCGGTGGAGATTCGACGGAA
GGGATGCACGGCCCACAACATCCCGGCCAAGCGCTGGAGATCTTGGAGCA
GCACTTTATCGGACTACTGGAGACTTAG
back to top